HEADER STRUCTURAL PROTEIN 27-MAY-23 8JIP TITLE CRYO-EM STRUCTURE OF THE GLP-1R/GCGR DUAL AGONIST MEDI0382-BOUND HUMAN TITLE 2 GLP-1R-GS COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCAGON-LIKE PEPTIDE 1 RECEPTOR; COMPND 3 CHAIN: R; COMPND 4 SYNONYM: GLP-1 RECEPTOR,GLP-1-R,GLP-1R; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) SUBUNIT ALPHA COMPND 8 ISOFORMS SHORT; COMPND 9 CHAIN: A; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: THERE IS NO AN APPROPRIATE UNIPROT/GENBANK ENTRY FOR COMPND 12 ENTITY 2 BECAUSE THE PROTEIN SEQUENCE (P63092) WAS MODIFIED.; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: MEDI0382; COMPND 15 CHAIN: P; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) SUBUNIT COMPND 19 BETA-1; COMPND 20 CHAIN: B; COMPND 21 SYNONYM: TRANSDUCIN BETA CHAIN 1; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 5; COMPND 24 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) SUBUNIT COMPND 25 GAMMA-2; COMPND 26 CHAIN: G; COMPND 27 SYNONYM: G GAMMA-I; COMPND 28 ENGINEERED: YES; COMPND 29 MOL_ID: 6; COMPND 30 MOLECULE: NANOBODY 35; COMPND 31 CHAIN: N; COMPND 32 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GLP1R; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 20 ORGANISM_COMMON: NORWAY RAT; SOURCE 21 ORGANISM_TAXID: 10116; SOURCE 22 GENE: GNB1; SOURCE 23 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 25 MOL_ID: 5; SOURCE 26 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 27 ORGANISM_COMMON: CATTLE; SOURCE 28 ORGANISM_TAXID: 9913; SOURCE 29 GENE: GNG2; SOURCE 30 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 32 MOL_ID: 6; SOURCE 33 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 34 ORGANISM_TAXID: 562; SOURCE 35 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 36 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS G PROTEIN-COUPLED RECEPTOR, LIGAND RECOGNITION, RECEPTOR ACTIVATION, KEYWDS 2 UNIMOLECULAR DUAL AGONIST, STRUCTURAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR L.YANG,Q.T.ZHOU,A.T.DAI,F.H.ZHAO,R.L.CHANG,T.L.YING,B.L.WU,D.H.YANG, AUTHOR 2 M.W.WANG,Z.T.CONG REVDAT 1 06-SEP-23 8JIP 0 JRNL AUTH Y.LI,Q.ZHOU,A.DAI,F.ZHAO,R.CHANG,T.YING,B.WU,D.YANG, JRNL AUTH 2 M.W.WANG,Z.CONG JRNL TITL STRUCTURAL ANALYSIS OF THE DUAL AGONISM AT GLP-1R AND GCGR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 96120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 37549266 JRNL DOI 10.1073/PNAS.2303696120 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.850 REMARK 3 NUMBER OF PARTICLES : 796065 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8JIP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 30-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1300037831. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYO-EM STRUCTURE OF THE GLP REMARK 245 -1R/GCGR DUAL AGONIST MEDI0382- REMARK 245 BOUND HUMAN GLP-1R-GS COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 8000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : OTHER REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, A, P, B, G, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG R 24 REMARK 465 PRO R 25 REMARK 465 GLN R 26 REMARK 465 GLY R 27 REMARK 465 ALA R 28 REMARK 465 THR R 29 REMARK 465 SER R 129 REMARK 465 LYS R 130 REMARK 465 ARG R 131 REMARK 465 GLY R 132 REMARK 465 GLU R 133 REMARK 465 ARG R 134 REMARK 465 SER R 135 REMARK 465 SER R 136 REMARK 465 HIS R 424 REMARK 465 LEU R 425 REMARK 465 HIS R 426 REMARK 465 ILE R 427 REMARK 465 GLN R 428 REMARK 465 ARG R 429 REMARK 465 ASP R 430 REMARK 465 SER R 431 REMARK 465 SER R 432 REMARK 465 MET R 433 REMARK 465 LYS R 434 REMARK 465 PRO R 435 REMARK 465 LEU R 436 REMARK 465 LYS R 437 REMARK 465 CYS R 438 REMARK 465 PRO R 439 REMARK 465 THR R 440 REMARK 465 SER R 441 REMARK 465 SER R 442 REMARK 465 LEU R 443 REMARK 465 SER R 444 REMARK 465 SER R 445 REMARK 465 GLY R 446 REMARK 465 ALA R 447 REMARK 465 THR R 448 REMARK 465 ALA R 449 REMARK 465 GLY R 450 REMARK 465 SER R 451 REMARK 465 SER R 452 REMARK 465 MET R 453 REMARK 465 TYR R 454 REMARK 465 THR R 455 REMARK 465 ALA R 456 REMARK 465 THR R 457 REMARK 465 CYS R 458 REMARK 465 GLN R 459 REMARK 465 ALA R 460 REMARK 465 SER R 461 REMARK 465 CYS R 462 REMARK 465 SER R 463 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 3 REMARK 465 VAL A 58 REMARK 465 ASN A 59 REMARK 465 GLY A 60 REMARK 465 TYR A 61 REMARK 465 SER A 62 REMARK 465 GLU A 63 REMARK 465 GLU A 64 REMARK 465 GLU A 65 REMARK 465 CYS A 66 REMARK 465 LYS A 67 REMARK 465 GLN A 68 REMARK 465 TYR A 69 REMARK 465 LYS A 70 REMARK 465 ALA A 71 REMARK 465 VAL A 72 REMARK 465 VAL A 73 REMARK 465 TYR A 74 REMARK 465 SER A 75 REMARK 465 ASN A 76 REMARK 465 THR A 77 REMARK 465 ILE A 78 REMARK 465 GLN A 79 REMARK 465 SER A 80 REMARK 465 ILE A 81 REMARK 465 ILE A 82 REMARK 465 ALA A 83 REMARK 465 ILE A 84 REMARK 465 ILE A 85 REMARK 465 ARG A 86 REMARK 465 ALA A 87 REMARK 465 MET A 88 REMARK 465 GLY A 89 REMARK 465 ARG A 90 REMARK 465 LEU A 91 REMARK 465 LYS A 92 REMARK 465 ILE A 93 REMARK 465 ASP A 94 REMARK 465 PHE A 95 REMARK 465 GLY A 96 REMARK 465 ASP A 97 REMARK 465 SER A 98 REMARK 465 ALA A 99 REMARK 465 ARG A 100 REMARK 465 ALA A 101 REMARK 465 ASP A 102 REMARK 465 ASP A 103 REMARK 465 ALA A 104 REMARK 465 ARG A 105 REMARK 465 GLN A 106 REMARK 465 LEU A 107 REMARK 465 PHE A 108 REMARK 465 VAL A 109 REMARK 465 LEU A 110 REMARK 465 ALA A 111 REMARK 465 GLY A 112 REMARK 465 ALA A 113 REMARK 465 ALA A 114 REMARK 465 GLU A 115 REMARK 465 GLU A 116 REMARK 465 GLY A 117 REMARK 465 PHE A 118 REMARK 465 MET A 119 REMARK 465 THR A 120 REMARK 465 ALA A 121 REMARK 465 GLU A 122 REMARK 465 LEU A 123 REMARK 465 ALA A 124 REMARK 465 GLY A 125 REMARK 465 VAL A 126 REMARK 465 ILE A 127 REMARK 465 LYS A 128 REMARK 465 ARG A 129 REMARK 465 LEU A 130 REMARK 465 TRP A 131 REMARK 465 LYS A 132 REMARK 465 ASP A 133 REMARK 465 SER A 134 REMARK 465 GLY A 135 REMARK 465 VAL A 136 REMARK 465 GLN A 137 REMARK 465 ALA A 138 REMARK 465 CYS A 139 REMARK 465 PHE A 140 REMARK 465 ASN A 141 REMARK 465 ARG A 142 REMARK 465 SER A 143 REMARK 465 ARG A 144 REMARK 465 GLU A 145 REMARK 465 TYR A 146 REMARK 465 GLN A 147 REMARK 465 LEU A 148 REMARK 465 ASN A 149 REMARK 465 ASP A 150 REMARK 465 SER A 151 REMARK 465 ALA A 152 REMARK 465 ALA A 153 REMARK 465 TYR A 154 REMARK 465 TYR A 155 REMARK 465 LEU A 156 REMARK 465 ASN A 157 REMARK 465 ASP A 158 REMARK 465 LEU A 159 REMARK 465 ASP A 160 REMARK 465 ARG A 161 REMARK 465 ILE A 162 REMARK 465 ALA A 163 REMARK 465 GLN A 164 REMARK 465 PRO A 165 REMARK 465 ASN A 166 REMARK 465 TYR A 167 REMARK 465 ILE A 168 REMARK 465 PRO A 169 REMARK 465 THR A 170 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 LEU B -1 REMARK 465 LEU B 0 REMARK 465 GLN B 1 REMARK 465 SER B 2 REMARK 465 ALA G 2 REMARK 465 SER G 3 REMARK 465 ASN G 4 REMARK 465 ASN G 5 REMARK 465 THR G 6 REMARK 465 GLU G 63 REMARK 465 LYS G 64 REMARK 465 LYS G 65 REMARK 465 PHE G 66 REMARK 465 PHE G 67 REMARK 465 CYS G 68 REMARK 465 ALA G 69 REMARK 465 ILE G 70 REMARK 465 LEU G 71 REMARK 465 MET N -1 REMARK 465 ALA N 0 REMARK 465 SER N 127 REMARK 465 SER N 128 REMARK 465 HIS N 129 REMARK 465 HIS N 130 REMARK 465 HIS N 131 REMARK 465 HIS N 132 REMARK 465 HIS N 133 REMARK 465 HIS N 134 REMARK 465 GLU N 135 REMARK 465 PRO N 136 REMARK 465 GLU N 137 REMARK 465 ALA N 138 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN R 37 CG CD OE1 NE2 REMARK 470 LYS R 38 CG CD CE NZ REMARK 470 ARG R 40 CG CD NE CZ NH1 NH2 REMARK 470 ARG R 64 CG CD NE CZ NH1 NH2 REMARK 470 ASP R 67 CG OD1 OD2 REMARK 470 GLU R 68 CG CD OE1 OE2 REMARK 470 TYR R 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TRP R 91 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP R 91 CZ3 CH2 REMARK 470 ARG R 121 CG CD NE CZ NH1 NH2 REMARK 470 LEU R 123 CG CD1 CD2 REMARK 470 GLU R 127 CG CD OE1 OE2 REMARK 470 SER R 206 OG REMARK 470 THR R 207 OG1 CG2 REMARK 470 GLN R 210 CG CD OE1 NE2 REMARK 470 GLN R 211 CG CD OE1 NE2 REMARK 470 HIS R 212 CG ND1 CD2 CE1 NE2 REMARK 470 GLN R 213 CG CD OE1 NE2 REMARK 470 LEU R 260 CG CD1 CD2 REMARK 470 MET R 340 CG SD CE REMARK 470 LYS R 342 CG CD CE NZ REMARK 470 ARG A 176 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 178 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 272 CG CD CE NZ REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 SER A 333 OG REMARK 470 ARG B 129 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS P 10 C07 D6M P 101 1.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP R 59 -154.44 -162.55 REMARK 500 PHE R 61 -159.92 -161.42 REMARK 500 CYS R 62 26.03 -175.19 REMARK 500 ASN R 63 96.91 -21.91 REMARK 500 THR R 65 -116.11 23.64 REMARK 500 TYR R 69 -81.29 -113.49 REMARK 500 CYS R 71 61.75 -116.72 REMARK 500 ASP R 74 -142.42 36.79 REMARK 500 VAL R 95 89.50 -151.66 REMARK 500 TRP R 110 -113.01 -95.24 REMARK 500 SER R 117 -80.22 -125.81 REMARK 500 LEU R 172 43.90 -90.10 REMARK 500 TYR R 205 -135.46 -131.12 REMARK 500 GLN R 211 -155.75 -93.37 REMARK 500 GLN R 213 65.61 -110.24 REMARK 500 GLN R 234 -3.56 -53.17 REMARK 500 LEU R 260 -151.82 -123.73 REMARK 500 LEU R 339 -103.80 50.29 REMARK 500 CYS R 341 86.29 56.44 REMARK 500 THR R 343 99.87 -65.81 REMARK 500 ASP R 344 14.19 -154.21 REMARK 500 VAL R 370 -68.45 -95.61 REMARK 500 ASP R 372 -57.73 -166.41 REMARK 500 ALA R 375 112.61 -38.73 REMARK 500 CYS R 403 -66.74 -152.24 REMARK 500 GLN A 172 -158.72 -92.69 REMARK 500 ARG A 178 -153.12 -97.82 REMARK 500 GLU A 186 -153.56 -82.55 REMARK 500 SER A 227 49.62 -90.48 REMARK 500 LEU A 249 53.35 -91.53 REMARK 500 ALA A 270 -166.53 -75.58 REMARK 500 LYS A 272 93.87 -54.61 REMARK 500 SER A 273 -82.32 -122.83 REMARK 500 ASP A 321 28.56 48.11 REMARK 500 GLN P 3 -33.63 -178.58 REMARK 500 LEU P 26 -76.88 -102.48 REMARK 500 ASN B 132 -144.15 -114.27 REMARK 500 ASP B 163 30.08 -94.79 REMARK 500 ASP B 205 13.53 -140.10 REMARK 500 ARG B 304 112.89 -34.99 REMARK 500 LEU B 308 40.11 -108.06 REMARK 500 ALA N 92 -168.89 -160.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 D6M P 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-36323 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE GLP-1R/GCGR DUAL AGONIST MEDI0382-BOUND REMARK 900 HUMAN GLP-1R-GS COMPLEX DBREF 8JIP R 24 463 UNP P43220 GLP1R_HUMAN 24 463 DBREF 8JIP A 1 361 PDB 8JIP 8JIP 1 361 DBREF 8JIP P 1 29 PDB 8JIP 8JIP 1 29 DBREF 8JIP B 2 340 UNP P54311 GBB1_RAT 2 340 DBREF 8JIP G 2 71 UNP P63212 GBG2_BOVIN 2 71 DBREF 8JIP N -1 138 PDB 8JIP 8JIP -1 138 SEQADV 8JIP MET B -4 UNP P54311 INITIATING METHIONINE SEQADV 8JIP GLY B -3 UNP P54311 EXPRESSION TAG SEQADV 8JIP SER B -2 UNP P54311 EXPRESSION TAG SEQADV 8JIP LEU B -1 UNP P54311 EXPRESSION TAG SEQADV 8JIP LEU B 0 UNP P54311 EXPRESSION TAG SEQADV 8JIP GLN B 1 UNP P54311 EXPRESSION TAG SEQRES 1 R 440 ARG PRO GLN GLY ALA THR VAL SER LEU TRP GLU THR VAL SEQRES 2 R 440 GLN LYS TRP ARG GLU TYR ARG ARG GLN CYS GLN ARG SER SEQRES 3 R 440 LEU THR GLU ASP PRO PRO PRO ALA THR ASP LEU PHE CYS SEQRES 4 R 440 ASN ARG THR PHE ASP GLU TYR ALA CYS TRP PRO ASP GLY SEQRES 5 R 440 GLU PRO GLY SER PHE VAL ASN VAL SER CYS PRO TRP TYR SEQRES 6 R 440 LEU PRO TRP ALA SER SER VAL PRO GLN GLY HIS VAL TYR SEQRES 7 R 440 ARG PHE CYS THR ALA GLU GLY LEU TRP LEU GLN LYS ASP SEQRES 8 R 440 ASN SER SER LEU PRO TRP ARG ASP LEU SER GLU CYS GLU SEQRES 9 R 440 GLU SER LYS ARG GLY GLU ARG SER SER PRO GLU GLU GLN SEQRES 10 R 440 LEU LEU PHE LEU TYR ILE ILE TYR THR VAL GLY TYR ALA SEQRES 11 R 440 LEU SER PHE SER ALA LEU VAL ILE ALA SER ALA ILE LEU SEQRES 12 R 440 LEU GLY PHE ARG HIS LEU HIS CYS THR ARG ASN TYR ILE SEQRES 13 R 440 HIS LEU ASN LEU PHE ALA SER PHE ILE LEU ARG ALA LEU SEQRES 14 R 440 SER VAL PHE ILE LYS ASP ALA ALA LEU LYS TRP MET TYR SEQRES 15 R 440 SER THR ALA ALA GLN GLN HIS GLN TRP ASP GLY LEU LEU SEQRES 16 R 440 SER TYR GLN ASP SER LEU SER CYS ARG LEU VAL PHE LEU SEQRES 17 R 440 LEU MET GLN TYR CYS VAL ALA ALA ASN TYR TYR TRP LEU SEQRES 18 R 440 LEU VAL GLU GLY VAL TYR LEU TYR THR LEU LEU ALA PHE SEQRES 19 R 440 SER VAL LEU SER GLU GLN TRP ILE PHE ARG LEU TYR VAL SEQRES 20 R 440 SER ILE GLY TRP GLY VAL PRO LEU LEU PHE VAL VAL PRO SEQRES 21 R 440 TRP GLY ILE VAL LYS TYR LEU TYR GLU ASP GLU GLY CYS SEQRES 22 R 440 TRP THR ARG ASN SER ASN MET ASN TYR TRP LEU ILE ILE SEQRES 23 R 440 ARG LEU PRO ILE LEU PHE ALA ILE GLY VAL ASN PHE LEU SEQRES 24 R 440 ILE PHE VAL ARG VAL ILE CYS ILE VAL VAL SER LYS LEU SEQRES 25 R 440 LYS ALA ASN LEU MET CYS LYS THR ASP ILE LYS CYS ARG SEQRES 26 R 440 LEU ALA LYS SER THR LEU THR LEU ILE PRO LEU LEU GLY SEQRES 27 R 440 THR HIS GLU VAL ILE PHE ALA PHE VAL MET ASP GLU HIS SEQRES 28 R 440 ALA ARG GLY THR LEU ARG PHE ILE LYS LEU PHE THR GLU SEQRES 29 R 440 LEU SER PHE THR SER PHE GLN GLY LEU MET VAL ALA ILE SEQRES 30 R 440 LEU TYR CYS PHE VAL ASN ASN GLU VAL GLN LEU GLU PHE SEQRES 31 R 440 ARG LYS SER TRP GLU ARG TRP ARG LEU GLU HIS LEU HIS SEQRES 32 R 440 ILE GLN ARG ASP SER SER MET LYS PRO LEU LYS CYS PRO SEQRES 33 R 440 THR SER SER LEU SER SER GLY ALA THR ALA GLY SER SER SEQRES 34 R 440 MET TYR THR ALA THR CYS GLN ALA SER CYS SER SEQRES 1 A 361 MET GLY CYS THR LEU SER ALA GLU ASP LYS ALA ALA VAL SEQRES 2 A 361 GLU ARG SER LYS MET ILE GLU LYS GLN LEU GLN LYS ASP SEQRES 3 A 361 LYS GLN VAL TYR ARG ALA THR HIS ARG LEU LEU LEU LEU SEQRES 4 A 361 GLY ALA ASP ASN SER GLY LYS SER THR ILE VAL LYS GLN SEQRES 5 A 361 MET ARG ILE TYR HIS VAL ASN GLY TYR SER GLU GLU GLU SEQRES 6 A 361 CYS LYS GLN TYR LYS ALA VAL VAL TYR SER ASN THR ILE SEQRES 7 A 361 GLN SER ILE ILE ALA ILE ILE ARG ALA MET GLY ARG LEU SEQRES 8 A 361 LYS ILE ASP PHE GLY ASP SER ALA ARG ALA ASP ASP ALA SEQRES 9 A 361 ARG GLN LEU PHE VAL LEU ALA GLY ALA ALA GLU GLU GLY SEQRES 10 A 361 PHE MET THR ALA GLU LEU ALA GLY VAL ILE LYS ARG LEU SEQRES 11 A 361 TRP LYS ASP SER GLY VAL GLN ALA CYS PHE ASN ARG SER SEQRES 12 A 361 ARG GLU TYR GLN LEU ASN ASP SER ALA ALA TYR TYR LEU SEQRES 13 A 361 ASN ASP LEU ASP ARG ILE ALA GLN PRO ASN TYR ILE PRO SEQRES 14 A 361 THR GLN GLN ASP VAL LEU ARG THR ARG VAL LYS THR SER SEQRES 15 A 361 GLY ILE PHE GLU THR LYS PHE GLN VAL ASP LYS VAL ASN SEQRES 16 A 361 PHE HIS MET PHE ASP VAL GLY ALA GLN ARG ASP GLU ARG SEQRES 17 A 361 ARG LYS TRP ILE GLN CYS PHE ASN ASP VAL THR ALA ILE SEQRES 18 A 361 ILE PHE VAL VAL ASP SER SER ASP TYR ASN ARG LEU GLN SEQRES 19 A 361 GLU ALA LEU ASN ASP PHE LYS SER ILE TRP ASN ASN ARG SEQRES 20 A 361 TRP LEU ARG THR ILE SER VAL ILE LEU PHE LEU ASN LYS SEQRES 21 A 361 GLN ASP LEU LEU ALA GLU LYS VAL LEU ALA GLY LYS SER SEQRES 22 A 361 LYS ILE GLU ASP TYR PHE PRO GLU PHE ALA ARG TYR THR SEQRES 23 A 361 THR PRO GLU ASP ALA THR PRO GLU PRO GLY GLU ASP PRO SEQRES 24 A 361 ARG VAL THR ARG ALA LYS TYR PHE ILE ARG ASP GLU PHE SEQRES 25 A 361 LEU ARG ILE SER THR ALA SER GLY ASP GLY ARG HIS TYR SEQRES 26 A 361 CYS TYR PRO HIS PHE THR CYS SER VAL ASP THR GLU ASN SEQRES 27 A 361 ILE ARG ARG VAL PHE ASN ASP CYS ARG ASP ILE ILE GLN SEQRES 28 A 361 ARG MET HIS LEU ARG GLN TYR GLU LEU LEU SEQRES 1 P 29 HIS SER GLN GLY THR PHE THR SER ASP LYS SER GLU TYR SEQRES 2 P 29 LEU ASP SER GLU ARG ALA GLN ASP PHE VAL ALA TRP LEU SEQRES 3 P 29 GLU ALA GLY SEQRES 1 B 345 MET GLY SER LEU LEU GLN SER GLU LEU ASP GLN LEU ARG SEQRES 2 B 345 GLN GLU ALA GLU GLN LEU LYS ASN GLN ILE ARG ASP ALA SEQRES 3 B 345 ARG LYS ALA CYS ALA ASP ALA THR LEU SER GLN ILE THR SEQRES 4 B 345 ASN ASN ILE ASP PRO VAL GLY ARG ILE GLN MET ARG THR SEQRES 5 B 345 ARG ARG THR LEU ARG GLY HIS LEU ALA LYS ILE TYR ALA SEQRES 6 B 345 MET HIS TRP GLY THR ASP SER ARG LEU LEU VAL SER ALA SEQRES 7 B 345 SER GLN ASP GLY LYS LEU ILE ILE TRP ASP SER TYR THR SEQRES 8 B 345 THR ASN LYS VAL HIS ALA ILE PRO LEU ARG SER SER TRP SEQRES 9 B 345 VAL MET THR CYS ALA TYR ALA PRO SER GLY ASN TYR VAL SEQRES 10 B 345 ALA CYS GLY GLY LEU ASP ASN ILE CYS SER ILE TYR ASN SEQRES 11 B 345 LEU LYS THR ARG GLU GLY ASN VAL ARG VAL SER ARG GLU SEQRES 12 B 345 LEU ALA GLY HIS THR GLY TYR LEU SER CYS CYS ARG PHE SEQRES 13 B 345 LEU ASP ASP ASN GLN ILE VAL THR SER SER GLY ASP THR SEQRES 14 B 345 THR CYS ALA LEU TRP ASP ILE GLU THR GLY GLN GLN THR SEQRES 15 B 345 THR THR PHE THR GLY HIS THR GLY ASP VAL MET SER LEU SEQRES 16 B 345 SER LEU ALA PRO ASP THR ARG LEU PHE VAL SER GLY ALA SEQRES 17 B 345 CYS ASP ALA SER ALA LYS LEU TRP ASP VAL ARG GLU GLY SEQRES 18 B 345 MET CYS ARG GLN THR PHE THR GLY HIS GLU SER ASP ILE SEQRES 19 B 345 ASN ALA ILE CYS PHE PHE PRO ASN GLY ASN ALA PHE ALA SEQRES 20 B 345 THR GLY SER ASP ASP ALA THR CYS ARG LEU PHE ASP LEU SEQRES 21 B 345 ARG ALA ASP GLN GLU LEU MET THR TYR SER HIS ASP ASN SEQRES 22 B 345 ILE ILE CYS GLY ILE THR SER VAL SER PHE SER LYS SER SEQRES 23 B 345 GLY ARG LEU LEU LEU ALA GLY TYR ASP ASP PHE ASN CYS SEQRES 24 B 345 ASN VAL TRP ASP ALA LEU LYS ALA ASP ARG ALA GLY VAL SEQRES 25 B 345 LEU ALA GLY HIS ASP ASN ARG VAL SER CYS LEU GLY VAL SEQRES 26 B 345 THR ASP ASP GLY MET ALA VAL ALA THR GLY SER TRP ASP SEQRES 27 B 345 SER PHE LEU LYS ILE TRP ASN SEQRES 1 G 70 ALA SER ASN ASN THR ALA SER ILE ALA GLN ALA ARG LYS SEQRES 2 G 70 LEU VAL GLU GLN LEU LYS MET GLU ALA ASN ILE ASP ARG SEQRES 3 G 70 ILE LYS VAL SER LYS ALA ALA ALA ASP LEU MET ALA TYR SEQRES 4 G 70 CYS GLU ALA HIS ALA LYS GLU ASP PRO LEU LEU THR PRO SEQRES 5 G 70 VAL PRO ALA SER GLU ASN PRO PHE ARG GLU LYS LYS PHE SEQRES 6 G 70 PHE CYS ALA ILE LEU SEQRES 1 N 140 MET ALA GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU SEQRES 2 N 140 VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SEQRES 3 N 140 SER GLY PHE THR PHE SER ASN TYR LYS MET ASN TRP VAL SEQRES 4 N 140 ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SER ASP SEQRES 5 N 140 ILE SER GLN SER GLY ALA SER ILE SER TYR THR GLY SER SEQRES 6 N 140 VAL LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SEQRES 7 N 140 ASN THR LEU TYR LEU GLN MET ASN SER LEU LYS PRO GLU SEQRES 8 N 140 ASP THR ALA VAL TYR TYR CYS ALA ARG CYS PRO ALA PRO SEQRES 9 N 140 PHE THR ARG ASP CYS PHE ASP VAL THR SER THR THR TYR SEQRES 10 N 140 ALA TYR ARG GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 11 N 140 HIS HIS HIS HIS HIS HIS GLU PRO GLU ALA HET D6M P 101 63 HETNAM D6M N-HEXADECANOYL-L-GLUTAMIC ACID FORMUL 7 D6M C21 H39 N O5 HELIX 1 AA1 SER R 31 THR R 51 1 21 HELIX 2 AA2 LEU R 89 SER R 94 1 6 HELIX 3 AA3 GLU R 139 PHE R 169 1 31 HELIX 4 AA4 CYS R 174 MET R 204 1 31 HELIX 5 AA5 GLN R 213 ASP R 222 1 10 HELIX 6 AA6 SER R 225 LEU R 232 1 8 HELIX 7 AA7 LEU R 232 PHE R 257 1 26 HELIX 8 AA8 SER R 261 TYR R 291 1 31 HELIX 9 AA9 GLU R 294 THR R 298 5 5 HELIX 10 AB1 ASN R 302 ARG R 326 1 25 HELIX 11 AB2 VAL R 327 LYS R 336 1 10 HELIX 12 AB3 ASP R 344 LEU R 349 1 6 HELIX 13 AB4 THR R 355 GLY R 361 1 7 HELIX 14 AB5 THR R 362 ILE R 366 5 5 HELIX 15 AB6 GLY R 377 TYR R 402 1 26 HELIX 16 AB7 ASN R 406 ARG R 421 1 16 HELIX 17 AB8 LEU A 5 ARG A 31 1 27 HELIX 18 AB9 GLY A 45 GLN A 52 1 8 HELIX 19 AC1 MET A 53 HIS A 57 5 5 HELIX 20 AC2 LYS A 210 ASN A 216 5 7 HELIX 21 AC3 ASP A 229 ASN A 245 1 17 HELIX 22 AC4 ARG A 247 THR A 251 5 5 HELIX 23 AC5 LYS A 260 ALA A 270 1 11 HELIX 24 AC6 GLU A 281 TYR A 285 5 5 HELIX 25 AC7 ASP A 298 ALA A 318 1 21 HELIX 26 AC8 GLU A 337 ARG A 356 1 20 HELIX 27 AC9 GLN A 357 GLU A 359 5 3 HELIX 28 AD1 GLN P 3 GLU P 27 1 25 HELIX 29 AD2 LEU B 4 ALA B 26 1 23 HELIX 30 AD3 THR B 29 THR B 34 1 6 HELIX 31 AD4 SER G 8 GLU G 22 1 15 HELIX 32 AD5 LYS G 29 GLU G 42 1 14 HELIX 33 AD6 THR N 28 TYR N 32 5 5 HELIX 34 AD7 LYS N 87 THR N 91 5 5 SHEET 1 AA1 2 SER R 79 VAL R 81 0 SHEET 2 AA1 2 ARG R 102 CYS R 104 -1 O ARG R 102 N VAL R 81 SHEET 1 AA2 3 ILE A 184 PHE A 185 0 SHEET 2 AA2 3 VAL A 194 ASP A 200 -1 O ASP A 200 N ILE A 184 SHEET 3 AA2 3 GLN A 190 VAL A 191 -1 N VAL A 191 O VAL A 194 SHEET 1 AA3 6 ILE A 184 PHE A 185 0 SHEET 2 AA3 6 VAL A 194 ASP A 200 -1 O ASP A 200 N ILE A 184 SHEET 3 AA3 6 THR A 33 LEU A 39 1 N HIS A 34 O HIS A 197 SHEET 4 AA3 6 ALA A 220 ASP A 226 1 O ILE A 222 N LEU A 37 SHEET 5 AA3 6 VAL A 254 ASN A 259 1 O ILE A 255 N ILE A 221 SHEET 6 AA3 6 CYS A 326 HIS A 329 1 O TYR A 327 N LEU A 256 SHEET 1 AA4 4 THR B 47 LEU B 51 0 SHEET 2 AA4 4 LEU B 336 TRP B 339 -1 O ILE B 338 N ARG B 48 SHEET 3 AA4 4 VAL B 327 SER B 331 -1 N VAL B 327 O TRP B 339 SHEET 4 AA4 4 VAL B 315 VAL B 320 -1 N GLY B 319 O ALA B 328 SHEET 1 AA5 4 ILE B 58 TRP B 63 0 SHEET 2 AA5 4 LEU B 70 SER B 74 -1 O VAL B 71 N HIS B 62 SHEET 3 AA5 4 LYS B 78 ILE B 81 -1 O ILE B 80 N SER B 72 SHEET 4 AA5 4 HIS B 91 PRO B 94 -1 O ILE B 93 N LEU B 79 SHEET 1 AA6 4 THR B 102 TYR B 105 0 SHEET 2 AA6 4 TYR B 111 GLY B 115 -1 O GLY B 115 N THR B 102 SHEET 3 AA6 4 CYS B 121 ASN B 125 -1 O SER B 122 N CYS B 114 SHEET 4 AA6 4 ARG B 134 LEU B 139 -1 O LEU B 139 N CYS B 121 SHEET 1 AA7 4 LEU B 146 PHE B 151 0 SHEET 2 AA7 4 GLN B 156 SER B 161 -1 O SER B 160 N SER B 147 SHEET 3 AA7 4 THR B 165 ASP B 170 -1 O TRP B 169 N ILE B 157 SHEET 4 AA7 4 THR B 178 THR B 181 -1 O PHE B 180 N CYS B 166 SHEET 1 AA8 4 VAL B 187 LEU B 192 0 SHEET 2 AA8 4 LEU B 198 ALA B 203 -1 O GLY B 202 N MET B 188 SHEET 3 AA8 4 SER B 207 ASP B 212 -1 O TRP B 211 N PHE B 199 SHEET 4 AA8 4 CYS B 218 THR B 223 -1 O PHE B 222 N ALA B 208 SHEET 1 AA9 4 ILE B 229 ILE B 232 0 SHEET 2 AA9 4 ALA B 240 SER B 245 -1 O GLY B 244 N ASN B 230 SHEET 3 AA9 4 CYS B 250 ASP B 254 -1 O PHE B 253 N PHE B 241 SHEET 4 AA9 4 GLU B 260 TYR B 264 -1 O TYR B 264 N CYS B 250 SHEET 1 AB1 3 VAL B 276 SER B 277 0 SHEET 2 AB1 3 LEU B 284 ALA B 287 -1 O LEU B 286 N SER B 277 SHEET 3 AB1 3 VAL B 296 ASP B 298 -1 O TRP B 297 N LEU B 285 SHEET 1 AB2 2 GLN N 3 SER N 7 0 SHEET 2 AB2 2 SER N 21 SER N 25 -1 O ALA N 23 N GLN N 5 SHEET 1 AB3 6 GLY N 10 LEU N 11 0 SHEET 2 AB3 6 THR N 122 THR N 125 1 O THR N 125 N GLY N 10 SHEET 3 AB3 6 VAL N 93 ALA N 97 -1 N TYR N 94 O THR N 122 SHEET 4 AB3 6 MET N 34 GLN N 39 -1 N VAL N 37 O TYR N 95 SHEET 5 AB3 6 LEU N 45 ILE N 51 -1 O GLU N 46 N ARG N 38 SHEET 6 AB3 6 ILE N 58 TYR N 60 -1 O SER N 59 N ASP N 50 SHEET 1 AB4 2 SER N 71 ASP N 73 0 SHEET 2 AB4 2 THR N 78 TYR N 80 -1 O THR N 78 N ASP N 73 SSBOND 1 CYS R 46 CYS R 71 1555 1555 2.03 SSBOND 2 CYS R 62 CYS R 104 1555 1555 2.03 SSBOND 3 CYS R 85 CYS R 126 1555 1555 2.03 SSBOND 4 CYS R 226 CYS R 296 1555 1555 2.03 SSBOND 5 CYS N 22 CYS N 96 1555 1555 2.03 SSBOND 6 CYS N 99 CYS N 107 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000