HEADER MEMBRANE PROTEIN 29-MAY-23 8JJ5 TITLE PORCINE UROPLAKIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETRASPANIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: UROPLAKIN 2; COMPND 6 CHAIN: B; COMPND 7 OTHER_DETAILS: NCBI REFERENCE SEQUENCE: NP_999177.1; COMPND 8 MOL_ID: 3; COMPND 9 MOLECULE: UROPLAKIN 3A; COMPND 10 CHAIN: C; COMPND 11 MOL_ID: 4; COMPND 12 MOLECULE: UPK1B; COMPND 13 CHAIN: D; COMPND 14 SYNONYM: UROPLAKIN-1B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 ORGAN: URINARY BLADDER; SOURCE 6 TISSUE: EPITHELIUM; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 9 ORGANISM_COMMON: PIG; SOURCE 10 ORGANISM_TAXID: 9823; SOURCE 11 ORGAN: URINARY BLADDER; SOURCE 12 TISSUE: EPITHELIUM; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 15 ORGANISM_COMMON: PIG; SOURCE 16 ORGANISM_TAXID: 9823; SOURCE 17 ORGAN: URINARY BLADDER; SOURCE 18 TISSUE: EPITHELIUM; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 21 ORGANISM_COMMON: PIG; SOURCE 22 ORGANISM_TAXID: 9823; SOURCE 23 ORGAN: URINARY BLADDER; SOURCE 24 TISSUE: EPITHELIUM KEYWDS UROTHELIUM, ASYMMETRIC UNIT MEMBRANE, URINARY BLADDER, URINARY TRACT KEYWDS 2 INFECTION, LIPID RAFT, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR T.ODA,H.YANAGISAWA,M.KIKKAWA REVDAT 4 16-OCT-24 8JJ5 1 REMARK REVDAT 3 08-MAY-24 8JJ5 1 JRNL REVDAT 2 27-DEC-23 8JJ5 1 JRNL REVDAT 1 14-JUN-23 8JJ5 0 JRNL AUTH H.YANAGISAWA,Y.KITA,T.ODA,M.KIKKAWA JRNL TITL CRYO-EM ELUCIDATES THE UROPLAKIN COMPLEX STRUCTURE WITHIN JRNL TITL 2 LIQUID-CRYSTALLINE LIPIDS IN THE PORCINE UROTHELIAL JRNL TITL 3 MEMBRANE. JRNL REF COMMUN BIOL V. 6 1018 2023 JRNL REFN ESSN 2399-3642 JRNL PMID 37805589 JRNL DOI 10.1038/S42003-023-05393-X REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, PHENIX, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, ISOLDE REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.500 REMARK 3 NUMBER OF PARTICLES : 609567 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8JJ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1300038005. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : 2D ARRAY REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : UROPLAKIN COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.05 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : ASYMMETRIC UNIT MEMBRANE REMARK 245 ISOLATED BY SARKOSYL EXTRACTION REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1100.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 4500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 64000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 GLY A 8 REMARK 465 GLU A 9 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 PRO B 4 REMARK 465 LEU B 5 REMARK 465 PRO B 6 REMARK 465 VAL B 7 REMARK 465 ARG B 8 REMARK 465 THR B 9 REMARK 465 LEU B 10 REMARK 465 PRO B 11 REMARK 465 LEU B 12 REMARK 465 ILE B 13 REMARK 465 LEU B 14 REMARK 465 ILE B 15 REMARK 465 LEU B 16 REMARK 465 LEU B 17 REMARK 465 ALA B 18 REMARK 465 VAL B 19 REMARK 465 LEU B 20 REMARK 465 ALA B 21 REMARK 465 PRO B 22 REMARK 465 GLY B 23 REMARK 465 ALA B 24 REMARK 465 SER B 25 REMARK 465 VAL B 89 REMARK 465 VAL B 90 REMARK 465 ASP B 91 REMARK 465 SER B 92 REMARK 465 GLY B 93 REMARK 465 SER B 94 REMARK 465 GLY B 95 REMARK 465 PHE B 96 REMARK 465 THR B 97 REMARK 465 VAL B 98 REMARK 465 THR B 99 REMARK 465 ARG B 100 REMARK 465 LEU B 101 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 LEU C 3 REMARK 465 LEU C 4 REMARK 465 TRP C 5 REMARK 465 ALA C 6 REMARK 465 LEU C 7 REMARK 465 LEU C 8 REMARK 465 ALA C 9 REMARK 465 LEU C 10 REMARK 465 GLY C 11 REMARK 465 CYS C 12 REMARK 465 LEU C 13 REMARK 465 GLN C 14 REMARK 465 LEU C 15 REMARK 465 GLY C 16 REMARK 465 SER C 17 REMARK 465 GLY C 18 REMARK 465 MET C 237 REMARK 465 GLY C 238 REMARK 465 GLY C 239 REMARK 465 ALA C 240 REMARK 465 ASP C 241 REMARK 465 GLY C 242 REMARK 465 GLU C 243 REMARK 465 MET C 244 REMARK 465 THR C 245 REMARK 465 HIS C 246 REMARK 465 ASP C 247 REMARK 465 SER C 248 REMARK 465 GLN C 249 REMARK 465 ILE C 250 REMARK 465 THR C 251 REMARK 465 GLN C 252 REMARK 465 GLU C 253 REMARK 465 ALA C 254 REMARK 465 VAL C 255 REMARK 465 PRO C 256 REMARK 465 LYS C 257 REMARK 465 GLY C 258 REMARK 465 THR C 259 REMARK 465 SER C 260 REMARK 465 GLU C 261 REMARK 465 PRO C 262 REMARK 465 SER C 263 REMARK 465 TYR C 264 REMARK 465 THR C 265 REMARK 465 SER C 266 REMARK 465 VAL C 267 REMARK 465 ASN C 268 REMARK 465 ARG C 269 REMARK 465 GLY C 270 REMARK 465 PRO C 271 REMARK 465 PRO C 272 REMARK 465 LEU C 273 REMARK 465 ASP C 274 REMARK 465 ARG C 275 REMARK 465 ALA C 276 REMARK 465 GLU C 277 REMARK 465 VAL C 278 REMARK 465 TYR C 279 REMARK 465 ALA C 280 REMARK 465 SER C 281 REMARK 465 LYS C 282 REMARK 465 LEU C 283 REMARK 465 GLN C 284 REMARK 465 ASP C 285 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 LYS D 3 REMARK 465 ASP D 4 REMARK 465 ASP D 5 REMARK 465 SER D 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER A 162 OD1 ASP A 166 1.57 REMARK 500 HH TYR D 129 OD1 ASP D 151 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG B 183 CZ ARG B 183 NH1 -0.093 REMARK 500 ARG B 183 CZ ARG B 183 NH2 -0.101 REMARK 500 ARG D 9 CZ ARG D 9 NH1 -0.095 REMARK 500 ARG D 9 CZ ARG D 9 NH2 -0.101 REMARK 500 ARG D 85 CZ ARG D 85 NH1 -0.087 REMARK 500 ARG D 85 CZ ARG D 85 NH2 -0.095 REMARK 500 TYR D 91 CE2 TYR D 91 CD2 -0.092 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 46 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 89 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 117 NE - CZ - NH2 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 147 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 183 CD - NE - CZ ANGL. DEV. = 9.2 DEGREES REMARK 500 PHE C 226 CB - CG - CD2 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG D 9 CD - NE - CZ ANGL. DEV. = 9.4 DEGREES REMARK 500 CYS D 10 CA - CB - SG ANGL. DEV. = 6.9 DEGREES REMARK 500 PHE D 11 CB - CG - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 CYS D 68 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 TYR D 91 CA - CB - CG ANGL. DEV. = 12.0 DEGREES REMARK 500 PHE D 92 CB - CG - CD2 ANGL. DEV. = 4.3 DEGREES REMARK 500 MET D 252 CA - CB - CG ANGL. DEV. = 11.1 DEGREES REMARK 500 TYR D 254 CB - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 58 -30.93 -141.95 REMARK 500 MET A 120 -18.57 -147.40 REMARK 500 SER A 136 25.59 49.87 REMARK 500 PRO A 164 28.72 -75.69 REMARK 500 LEU A 209 22.70 -74.96 REMARK 500 ASP A 210 -38.37 -139.88 REMARK 500 PHE B 27 -178.61 -68.35 REMARK 500 GLU B 42 -106.44 60.00 REMARK 500 LYS B 69 92.54 -68.73 REMARK 500 ARG B 81 35.69 -72.60 REMARK 500 GLU B 85 -102.31 62.02 REMARK 500 ILE B 146 85.53 -69.27 REMARK 500 MET B 150 108.18 -56.59 REMARK 500 PHE C 30 28.50 -141.46 REMARK 500 ALA C 31 53.62 -144.80 REMARK 500 CYS C 47 -4.48 61.47 REMARK 500 ALA C 53 70.04 55.41 REMARK 500 ALA C 75 69.02 -69.55 REMARK 500 SER C 86 35.72 -91.93 REMARK 500 PRO C 109 34.66 -75.43 REMARK 500 CYS C 110 -34.09 66.21 REMARK 500 LEU C 113 70.12 37.64 REMARK 500 ASN C 139 78.84 -117.32 REMARK 500 ARG C 149 49.15 -80.04 REMARK 500 ASN C 153 68.73 -108.06 REMARK 500 ALA C 158 160.28 -49.21 REMARK 500 ILE C 197 93.94 -69.23 REMARK 500 ASP C 198 108.33 -57.58 REMARK 500 ARG C 203 150.36 -47.01 REMARK 500 SER D 42 -110.23 53.01 REMARK 500 LEU D 43 -12.81 78.43 REMARK 500 THR D 50 10.42 -144.34 REMARK 500 SER D 133 43.77 -155.99 REMARK 500 TYR D 158 19.52 58.91 REMARK 500 PRO D 165 6.04 -63.80 REMARK 500 ARG D 257 30.21 -92.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 45 0.08 SIDE CHAIN REMARK 500 TYR A 48 0.15 SIDE CHAIN REMARK 500 TYR A 103 0.10 SIDE CHAIN REMARK 500 TYR A 114 0.10 SIDE CHAIN REMARK 500 ARG A 117 0.12 SIDE CHAIN REMARK 500 ARG A 175 0.10 SIDE CHAIN REMARK 500 TYR A 254 0.12 SIDE CHAIN REMARK 500 TYR B 116 0.07 SIDE CHAIN REMARK 500 TYR C 64 0.07 SIDE CHAIN REMARK 500 TYR C 100 0.12 SIDE CHAIN REMARK 500 TYR C 162 0.07 SIDE CHAIN REMARK 500 ARG D 113 0.16 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-36340 RELATED DB: EMDB REMARK 900 PORCINE UROPLAKIN COMPLEX DBREF 8JJ5 A 1 257 UNP Q06AT5 Q06AT5_PIG 1 257 DBREF 8JJ5 B 1 184 PDB 8JJ5 8JJ5 1 184 DBREF1 8JJ5 C 1 285 UNP A0A287AEW0_PIG DBREF2 8JJ5 C A0A287AEW0 1 285 DBREF 8JJ5 D 1 260 UNP Q06AT4 Q06AT4_PIG 1 260 SEQRES 1 A 257 MET ALA SER ALA ALA ALA GLU GLY GLU LYS GLY SER PRO SEQRES 2 A 257 VAL VAL VAL GLY LEU LEU VAL VAL GLY ASN ILE ILE ILE SEQRES 3 A 257 LEU LEU SER GLY LEU ALA LEU PHE ALA GLU THR ILE TRP SEQRES 4 A 257 VAL THR ALA ASP GLN TYR ARG VAL TYR PRO LEU MET GLY SEQRES 5 A 257 VAL SER GLY LYS ASP ASP VAL PHE ALA GLY ALA TRP ILE SEQRES 6 A 257 ALA ILE PHE CYS GLY PHE SER PHE PHE VAL VAL ALA SER SEQRES 7 A 257 PHE GLY VAL GLY ALA ALA LEU CYS ARG ARG ARG SER MET SEQRES 8 A 257 ILE LEU THR TYR LEU VAL LEU MET LEU ILE VAL TYR ILE SEQRES 9 A 257 PHE GLU CYS ALA SER CYS ILE THR SER TYR THR HIS ARG SEQRES 10 A 257 ASP TYR MET VAL SER ASN PRO SER LEU ILE THR LYS GLN SEQRES 11 A 257 MET LEU THR PHE TYR SER ALA ASP SER ASP GLN GLY ARG SEQRES 12 A 257 GLU LEU THR ARG LEU TRP ASP ARG VAL MET ILE GLU GLN SEQRES 13 A 257 GLU CYS CYS GLY THR SER GLY PRO MET ASP TRP VAL ASN SEQRES 14 A 257 PHE THR SER ALA PHE ARG ALA SER THR PRO GLU VAL VAL SEQRES 15 A 257 PHE PRO TRP PRO PRO LEU CYS CYS ARG ARG THR GLY ASN SEQRES 16 A 257 PHE ILE PRO VAL ASN GLU GLU GLY CYS ARG LEU GLY HIS SEQRES 17 A 257 LEU ASP TYR LEU PHE THR LYS GLY CYS PHE GLU HIS ILE SEQRES 18 A 257 GLY HIS ALA ILE ASP SER TYR THR TRP GLY ILE SER TRP SEQRES 19 A 257 PHE GLY PHE ALA ILE LEU MET TRP THR LEU PRO VAL MET SEQRES 20 A 257 LEU ILE ALA MET TYR PHE TYR THR THR LEU SEQRES 1 B 184 MET ALA SER PRO LEU PRO VAL ARG THR LEU PRO LEU ILE SEQRES 2 B 184 LEU ILE LEU LEU ALA VAL LEU ALA PRO GLY ALA SER ASP SEQRES 3 B 184 PHE ASN ILE SER SER LEU SER GLY PRO LEU SER PRO ALA SEQRES 4 B 184 LEU THR GLU SER LEU LEU VAL ALA LEU PRO PRO CYS HIS SEQRES 5 B 184 LEU THR GLY GLY ASN ALA THR LEU MET VAL ARG ARG ALA SEQRES 6 B 184 ASN ASP SER LYS VAL VAL LYS SER SER PHE MET VAL PRO SEQRES 7 B 184 PRO CYS ARG GLY ARG ARG GLU LEU VAL SER VAL VAL ASP SEQRES 8 B 184 SER GLY SER GLY PHE THR VAL THR ARG LEU SER ALA TYR SEQRES 9 B 184 GLN VAL THR ASN LEU VAL PRO GLY THR LYS TYR TYR ILE SEQRES 10 B 184 SER TYR LEU VAL THR LYS GLY ALA SER THR GLU SER SER SEQRES 11 B 184 ARG GLU ILE PRO MET SER THR LEU PRO ARG ARG LYS ALA SEQRES 12 B 184 GLU ALA ILE GLY LEU GLY MET ALA PRO THR GLY GLY MET SEQRES 13 B 184 VAL VAL ILE GLN VAL LEU LEU SER VAL ALA MET PHE LEU SEQRES 14 B 184 LEU VAL VAL GLY PHE ILE THR ALA LEU ALA LEU GLY ALA SEQRES 15 B 184 ARG LYS SEQRES 1 C 285 MET PRO LEU LEU TRP ALA LEU LEU ALA LEU GLY CYS LEU SEQRES 2 C 285 GLN LEU GLY SER GLY VAL ASN LEU GLN PRO GLN LEU ALA SEQRES 3 C 285 SER VAL THR PHE ALA THR ASN ASN PRO THR LEU THR THR SEQRES 4 C 285 VAL ALA LEU GLU LYS PRO LEU CYS MET PHE ASP SER SER SEQRES 5 C 285 ALA ALA LEU HIS GLY THR TYR GLU VAL TYR LEU TYR VAL SEQRES 6 C 285 LEU VAL ASP SER ALA SER SER ARG ASN ALA SER VAL GLN SEQRES 7 C 285 ASP SER THR LYS THR PRO LEU SER SER THR PRO GLN GLU SEQRES 8 C 285 THR GLU GLY GLY ARG THR GLY PRO TYR LYS ALA ALA ALA SEQRES 9 C 285 PHE ASP LEU ALA PRO CYS SER ASP LEU PRO SER LEU ASP SEQRES 10 C 285 ALA VAL ARG ASP VAL SER GLN ALA SER GLU ILE LEU ASN SEQRES 11 C 285 ALA TYR LEU VAL ARG VAL GLY ILE ASN GLY THR CYS LEU SEQRES 12 C 285 SER ASP PRO ASN PHE ARG GLY LEU CYS ASN PRO PRO LEU SEQRES 13 C 285 SER ALA ALA THR GLU TYR ARG PHE LYS TYR VAL LEU VAL SEQRES 14 C 285 ASN ILE SER THR GLY LEU VAL GLN ASP GLN THR LEU TRP SEQRES 15 C 285 SER ASP PRO VAL CYS THR ASN GLN LEU THR PRO TYR SER SEQRES 16 C 285 ALA ILE ASP THR TRP PRO GLY ARG ARG SER GLY GLY MET SEQRES 17 C 285 ILE VAL ILE THR SER ILE LEU GLY SER LEU PRO PHE PHE SEQRES 18 C 285 LEU LEU VAL GLY PHE ALA GLY ALA ILE VAL LEU SER LEU SEQRES 19 C 285 MET ASP MET GLY GLY ALA ASP GLY GLU MET THR HIS ASP SEQRES 20 C 285 SER GLN ILE THR GLN GLU ALA VAL PRO LYS GLY THR SER SEQRES 21 C 285 GLU PRO SER TYR THR SER VAL ASN ARG GLY PRO PRO LEU SEQRES 22 C 285 ASP ARG ALA GLU VAL TYR ALA SER LYS LEU GLN ASP SEQRES 1 D 260 MET ALA LYS ASP ASP SER THR VAL ARG CYS PHE GLN SER SEQRES 2 D 260 LEU LEU VAL PHE GLY ASN VAL ILE ILE GLY MET CYS GLY SEQRES 3 D 260 ILE ALA LEU THR ALA GLU CYS ILE PHE PHE VAL SER ASP SEQRES 4 D 260 GLN TYR SER LEU TYR PRO LEU LEU GLU ALA THR ASP ASN SEQRES 5 D 260 ASP ASP ILE TYR GLY ALA ALA TRP ILE GLY ILE PHE VAL SEQRES 6 D 260 GLY ILE CYS LEU PHE CYS LEU SER VAL LEU GLY ILE VAL SEQRES 7 D 260 GLY ILE MET LYS SER ASN ARG LYS ILE LEU LEU VAL TYR SEQRES 8 D 260 PHE ILE LEU MET PHE ILE VAL TYR GLY PHE GLU VAL ALA SEQRES 9 D 260 SER CYS ILE THR ALA ALA THR GLN ARG ASP PHE PHE THR SEQRES 10 D 260 PRO ASN LEU PHE LEU LYS GLN MET LEU GLU ARG TYR GLN SEQRES 11 D 260 ASN ASN SER PRO PRO SER ASN ASP ASP LYS TRP LYS ASN SEQRES 12 D 260 ASN GLY VAL THR LYS THR TRP ASP ARG LEU MET LEU GLN SEQRES 13 D 260 ASP TYR CYS CYS GLY VAL ASN GLY PRO SER ASP TRP GLN SEQRES 14 D 260 LYS TYR THR SER ALA PHE ARG THR GLU ASN ASN ASP ALA SEQRES 15 D 260 ASP TYR PRO TRP PRO ARG GLN CYS CYS VAL MET ASN LYS SEQRES 16 D 260 LEU LYS GLU PRO LEU ASN LEU GLU ALA CYS LYS LEU GLY SEQRES 17 D 260 VAL PRO GLY TYR TYR HIS ASN GLN GLY CYS TYR GLU LEU SEQRES 18 D 260 ILE SER GLY PRO MET ASN ARG HIS ALA TRP GLY VAL ALA SEQRES 19 D 260 TRP PHE GLY PHE ALA ILE LEU CYS TRP THR PHE TRP VAL SEQRES 20 D 260 LEU LEU GLY THR MET PHE TYR TRP SER ARG ILE GLU TYR HET NAG E 1 27 HET NAG E 2 28 HET NAG F 1 27 HET NAG F 2 27 HET BMA F 3 22 HET NAG G 1 27 HET NAG G 2 27 HET BMA G 3 20 HET MAN G 4 22 HET MAN G 5 22 HET NAG H 1 27 HET NAG H 2 28 HET NAG B 201 28 HET NAG D 301 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 10(C8 H15 N O6) FORMUL 6 BMA 2(C6 H12 O6) FORMUL 7 MAN 2(C6 H12 O6) HELIX 1 AA1 SER A 12 ALA A 42 1 31 HELIX 2 AA2 VAL A 47 VAL A 53 1 7 HELIX 3 AA3 ASP A 58 ARG A 87 1 30 HELIX 4 AA4 ARG A 88 SER A 122 1 35 HELIX 5 AA5 PRO A 124 TYR A 135 1 12 HELIX 6 AA6 SER A 139 GLU A 157 1 19 HELIX 7 AA7 SER A 162 PRO A 164 5 3 HELIX 8 AA8 MET A 165 PHE A 170 1 6 HELIX 9 AA9 SER A 172 THR A 178 1 7 HELIX 10 AB1 PRO A 186 CYS A 190 5 5 HELIX 11 AB2 GLU A 201 LEU A 206 1 6 HELIX 12 AB3 CYS A 217 LEU A 257 1 41 HELIX 13 AB4 PRO B 50 THR B 54 5 5 HELIX 14 AB5 LYS B 142 ILE B 146 5 5 HELIX 15 AB6 THR B 153 ALA B 182 1 30 HELIX 16 AB7 SER C 69 ALA C 75 5 7 HELIX 17 AB8 ASP C 117 ASP C 121 5 5 HELIX 18 AB9 GLN C 124 TYR C 132 1 9 HELIX 19 AC1 PRO C 193 ILE C 197 5 5 HELIX 20 AC2 GLY C 206 ASP C 236 1 31 HELIX 21 AC3 VAL D 8 SER D 38 1 31 HELIX 22 AC4 LEU D 43 GLU D 48 1 6 HELIX 23 AC5 ASP D 53 SER D 83 1 31 HELIX 24 AC6 ASN D 84 ASP D 114 1 31 HELIX 25 AC7 ASN D 119 TYR D 129 1 11 HELIX 26 AC8 SER D 136 ASP D 157 1 22 HELIX 27 AC9 SER D 166 LYS D 170 5 5 HELIX 28 AD1 SER D 173 ASN D 179 1 7 HELIX 29 AD2 PRO D 187 CYS D 191 5 5 HELIX 30 AD3 ASN D 201 GLY D 208 1 8 HELIX 31 AD4 CYS D 218 ARG D 257 1 40 SHEET 1 AA1 2 LEU B 44 VAL B 46 0 SHEET 2 AA1 2 TYR B 104 VAL B 106 -1 O TYR B 104 N VAL B 46 SHEET 1 AA2 4 VAL B 70 MET B 76 0 SHEET 2 AA2 4 ASN B 57 ARG B 64 -1 N ALA B 58 O PHE B 75 SHEET 3 AA2 4 LYS B 114 LYS B 123 -1 O TYR B 116 N ARG B 63 SHEET 4 AA2 4 SER B 126 SER B 129 -1 O GLU B 128 N VAL B 121 SHEET 1 AA3 4 VAL B 70 MET B 76 0 SHEET 2 AA3 4 ASN B 57 ARG B 64 -1 N ALA B 58 O PHE B 75 SHEET 3 AA3 4 LYS B 114 LYS B 123 -1 O TYR B 116 N ARG B 63 SHEET 4 AA3 4 ILE B 133 SER B 136 -1 O MET B 135 N TYR B 115 SHEET 1 AA4 2 VAL C 40 GLU C 43 0 SHEET 2 AA4 2 LEU C 133 VAL C 136 -1 O VAL C 136 N VAL C 40 SHEET 1 AA5 4 TYR C 100 ASP C 106 0 SHEET 2 AA5 4 GLU C 60 VAL C 67 -1 N VAL C 61 O PHE C 105 SHEET 3 AA5 4 GLU C 161 VAL C 169 -1 O VAL C 169 N GLU C 60 SHEET 4 AA5 4 VAL C 176 GLN C 179 -1 O GLN C 177 N LEU C 168 SHEET 1 AA6 4 TYR C 100 ASP C 106 0 SHEET 2 AA6 4 GLU C 60 VAL C 67 -1 N VAL C 61 O PHE C 105 SHEET 3 AA6 4 GLU C 161 VAL C 169 -1 O VAL C 169 N GLU C 60 SHEET 4 AA6 4 VAL C 186 CYS C 187 -1 O VAL C 186 N TYR C 162 SSBOND 1 CYS A 158 CYS A 217 1555 1555 2.02 SSBOND 2 CYS A 159 CYS A 189 1555 1555 2.02 SSBOND 3 CYS A 190 CYS A 204 1555 1555 2.02 SSBOND 4 CYS B 51 CYS B 80 1555 1555 2.03 SSBOND 5 CYS C 47 CYS C 110 1555 1555 2.04 SSBOND 6 CYS C 142 CYS C 152 1555 1555 2.05 SSBOND 7 CYS D 159 CYS D 218 1555 1555 2.01 SSBOND 8 CYS D 160 CYS D 190 1555 1555 2.04 SSBOND 9 CYS D 191 CYS D 205 1555 1555 2.02 LINK ND2 ASN A 169 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 28 C1 NAG B 201 1555 1555 1.45 LINK ND2 ASN B 57 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN C 139 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN C 170 C1 NAG H 1 1555 1555 1.46 LINK ND2 ASN D 131 C1 NAG D 301 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.47 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.46 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.47 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.46 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.47 LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.46 LINK O6 BMA G 3 C1 MAN G 5 1555 1555 1.47 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.46 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000