HEADER HYDROLASE 31-MAY-23 8JJM TITLE X-RAY CRYSTAL STRUCTURE OF A MULTIFUNCTIONAL ENZYME (AMY63) FROM TITLE 2 VIBRIO ALGINOLYTICUS 63 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMY63; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO ALGINOLYTICUS; SOURCE 3 ORGANISM_TAXID: 663; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.F.SUN,W.ZHANG REVDAT 1 13-SEP-23 8JJM 0 JRNL AUTH Y.SUN,G.LIU,G.LIU,H.TANG,C.SUN,W.ZHANG,L.CHEN JRNL TITL THE NOVEL AMYLASE FUNCTION OF THE CARBOXYL TERMINAL DOMAIN JRNL TITL 2 OF AMY63. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 671 10 2023 JRNL REFN ESSN 1090-2104 JRNL PMID 37290279 JRNL DOI 10.1016/J.BBRC.2023.05.071 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 92204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.180 REMARK 3 FREE R VALUE TEST SET COUNT : 2007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.7900 - 4.3400 1.00 7320 163 0.1500 0.1783 REMARK 3 2 4.3400 - 3.4500 1.00 7147 160 0.1289 0.1741 REMARK 3 3 3.4500 - 3.0100 1.00 7135 159 0.1511 0.1429 REMARK 3 4 3.0100 - 2.7400 1.00 7098 158 0.1611 0.1792 REMARK 3 5 2.7400 - 2.5400 1.00 7100 158 0.1670 0.1984 REMARK 3 6 2.5400 - 2.3900 1.00 7061 162 0.1660 0.2035 REMARK 3 7 2.3900 - 2.2700 1.00 7044 156 0.1675 0.2037 REMARK 3 8 2.2700 - 2.1700 1.00 7105 162 0.1714 0.2233 REMARK 3 9 2.1700 - 2.0900 1.00 7070 149 0.1800 0.2447 REMARK 3 10 2.0900 - 2.0200 0.99 6937 157 0.1862 0.2254 REMARK 3 11 2.0200 - 1.9500 0.92 6510 142 0.1994 0.2303 REMARK 3 12 1.9500 - 1.9000 0.75 5319 113 0.2070 0.2430 REMARK 3 13 1.9000 - 1.8500 0.60 4213 102 0.2220 0.2845 REMARK 3 14 1.8500 - 1.8000 0.44 3138 66 0.2283 0.2674 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.151 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.842 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 8202 REMARK 3 ANGLE : 0.913 11146 REMARK 3 CHIRALITY : 0.056 1078 REMARK 3 PLANARITY : 0.007 1434 REMARK 3 DIHEDRAL : 6.144 1066 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8JJM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 03-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1300037889. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-16; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRF; NFPSS REMARK 200 BEAMLINE : BL17U1; BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920; 0.97920 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; NULL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101586 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 35.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.10840 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 70% MPD, PH8.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.74750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 13 56.23 -93.99 REMARK 500 LEU A 68 35.68 -86.29 REMARK 500 TYR A 153 -35.53 76.85 REMARK 500 LEU A 201 -57.41 -123.45 REMARK 500 TYR A 203 -148.22 52.63 REMARK 500 LYS A 242 110.60 -35.85 REMARK 500 ASN A 321 71.11 -153.16 REMARK 500 LEU A 337 -4.75 88.64 REMARK 500 SER A 342 67.26 -157.74 REMARK 500 PRO A 427 37.26 -83.88 REMARK 500 TYR B 13 53.09 -91.93 REMARK 500 TYR B 63 -64.19 -101.65 REMARK 500 LEU B 68 35.54 -90.54 REMARK 500 VAL B 142 10.68 -140.11 REMARK 500 TYR B 153 -35.69 73.89 REMARK 500 LEU B 201 -60.51 -122.11 REMARK 500 TYR B 203 -144.17 52.58 REMARK 500 LYS B 242 115.88 -39.99 REMARK 500 ASN B 321 70.88 -156.38 REMARK 500 LEU B 337 -3.66 81.92 REMARK 500 LEU B 340 31.07 -93.90 REMARK 500 SER B 342 68.38 -159.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1107 DISTANCE = 5.98 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 108 OD1 REMARK 620 2 ASP A 199 O 99.6 REMARK 620 3 ASP A 199 OD1 165.1 82.3 REMARK 620 4 ASP A 205 OD1 90.6 80.4 104.3 REMARK 620 5 HIS A 240 O 84.9 89.7 80.3 168.3 REMARK 620 6 HOH A 814 O 85.6 162.1 97.1 82.4 107.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 164 OD1 REMARK 620 2 ASP A 164 OD2 52.3 REMARK 620 3 ALA A 186 O 80.0 90.0 REMARK 620 4 ASP A 188 OD1 132.0 81.6 116.5 REMARK 620 5 ASP A 207 OD1 84.5 92.8 157.9 85.5 REMARK 620 6 HOH A 625 O 146.2 152.0 78.2 81.2 107.7 REMARK 620 7 HOH A 825 O 79.2 131.2 85.2 142.5 76.5 73.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 164 OD2 REMARK 620 2 ASP A 188 OD2 85.6 REMARK 620 3 ASP A 199 OD1 139.4 94.5 REMARK 620 4 ASP A 199 OD2 90.2 93.5 49.3 REMARK 620 5 ASP A 205 OD2 112.4 160.8 76.4 93.1 REMARK 620 6 LEU A 206 O 100.8 87.2 119.8 169.0 83.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 305 O REMARK 620 2 TYR A 307 O 108.8 REMARK 620 3 TRP A 413 O 169.0 77.5 REMARK 620 4 ASP A 414 OD1 88.5 153.8 82.7 REMARK 620 5 ASP A 436 OD1 94.9 118.2 89.7 78.3 REMARK 620 6 ASP A 436 OD2 76.1 79.2 114.4 125.1 51.9 REMARK 620 7 HOH A 908 O 81.6 79.1 91.0 84.3 162.4 141.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 108 OD1 REMARK 620 2 ASP B 199 O 98.8 REMARK 620 3 ASP B 199 OD1 165.5 80.5 REMARK 620 4 ASP B 205 OD1 88.6 77.6 105.3 REMARK 620 5 HIS B 240 O 84.9 91.7 80.7 166.5 REMARK 620 6 HOH B 848 O 88.2 158.6 97.7 82.5 109.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 164 OD1 REMARK 620 2 ASP B 164 OD2 53.7 REMARK 620 3 ALA B 186 O 78.8 85.3 REMARK 620 4 ASP B 188 OD1 129.7 78.9 116.6 REMARK 620 5 ASP B 207 OD1 83.4 92.9 159.2 83.2 REMARK 620 6 HOH B 718 O 78.7 132.3 88.8 143.2 77.1 REMARK 620 7 HOH B 901 O 151.5 144.3 81.5 77.8 110.6 80.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 164 OD2 REMARK 620 2 ASP B 188 OD2 86.9 REMARK 620 3 ASP B 199 OD1 135.1 92.9 REMARK 620 4 ASP B 199 OD2 87.9 92.0 47.2 REMARK 620 5 ASP B 205 OD2 113.8 159.3 72.6 88.7 REMARK 620 6 LEU B 206 O 106.0 91.5 118.9 165.8 83.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 305 O REMARK 620 2 TYR B 307 O 109.3 REMARK 620 3 TRP B 413 O 164.2 76.2 REMARK 620 4 ASP B 414 OD1 84.3 154.7 85.6 REMARK 620 5 ASP B 436 OD1 99.4 117.0 90.7 80.0 REMARK 620 6 ASP B 436 OD2 77.3 81.4 118.4 123.2 51.8 REMARK 620 7 HOH B 936 O 82.0 78.9 84.7 82.2 161.9 144.7 REMARK 620 N 1 2 3 4 5 6 DBREF1 8JJM A 5 488 UNP A0A0S2UQL4_VIBAL DBREF2 8JJM A A0A0S2UQL4 24 507 DBREF1 8JJM B 5 488 UNP A0A0S2UQL4_VIBAL DBREF2 8JJM B A0A0S2UQL4 24 507 SEQRES 1 A 484 ALA GLN ASN GLY THR MET MET GLN TYR PHE HIS TRP TYR SEQRES 2 A 484 VAL PRO ASN ASP GLY ALA LEU TRP THR GLN VAL GLU ASN SEQRES 3 A 484 ASN ALA SER ALA LEU SER ASP ASN GLY PHE THR ALA LEU SEQRES 4 A 484 TRP LEU PRO PRO ALA TYR LYS GLY ALA GLY GLY SER ASN SEQRES 5 A 484 ASP VAL GLY TYR GLY VAL TYR ASP MET TYR ASP LEU GLY SEQRES 6 A 484 GLU PHE ASP GLN GLN GLY SER VAL ARG THR LYS TYR GLY SEQRES 7 A 484 THR LYS ASP GLN TYR LEU SER ALA ILE ASN THR ALA HIS SEQRES 8 A 484 LYS ASN ASN ILE GLN ILE TYR GLY ASP VAL VAL PHE ASN SEQRES 9 A 484 HIS ARG GLY GLY ALA ASP GLY LYS SER TRP VAL ASP THR SEQRES 10 A 484 LYS ARG VAL ASP TRP ASN ASN ARG ASN ILE GLU LEU GLY SEQRES 11 A 484 ASP LYS TRP ILE GLU ALA TRP VAL GLU PHE ASP PHE PRO SEQRES 12 A 484 GLY ARG ASN ASP LYS TYR SER ASN PHE HIS TRP THR TRP SEQRES 13 A 484 TYR HIS PHE ASP GLY VAL ASP TRP ASP ASP ALA GLY GLU SEQRES 14 A 484 GLU LYS ALA ILE PHE LYS PHE LYS GLY GLU GLY LYS ALA SEQRES 15 A 484 TRP ASP TRP GLU VAL SER SER GLU LYS GLY ASN TYR ASP SEQRES 16 A 484 TYR LEU MET TYR ALA ASP LEU ASP MET ASP HIS PRO GLU SEQRES 17 A 484 VAL LYS GLN GLU LEU LYS ASP TRP GLY GLU TRP TYR ILE SEQRES 18 A 484 ASN MET THR GLY VAL ASP GLY PHE ARG MET ASP ALA VAL SEQRES 19 A 484 LYS HIS ILE LYS TYR GLN TYR LEU GLN GLU TRP ILE ASP SEQRES 20 A 484 HIS LEU ARG TRP LYS THR GLY LYS GLU LEU PHE THR VAL SEQRES 21 A 484 GLY GLU TYR TRP ASN TYR ASP VAL ASN GLN LEU HIS ASN SEQRES 22 A 484 PHE ILE THR LYS THR SER GLY SER MET SER LEU PHE ASP SEQRES 23 A 484 ALA PRO LEU HIS MET ASN PHE TYR ASN ALA SER LYS SER SEQRES 24 A 484 GLY GLY SER TYR ASP MET ARG GLN ILE MET ASP GLY THR SEQRES 25 A 484 LEU MET LYS ASP ASN SER VAL LYS ALA VAL THR LEU VAL SEQRES 26 A 484 GLU ASN HIS ASP THR GLN PRO LEU GLN ALA LEU GLU SER SEQRES 27 A 484 THR VAL ASP TRP TRP PHE LYS PRO LEU ALA TYR ALA PHE SEQRES 28 A 484 ILE LEU LEU ARG GLU GLU GLY TYR PRO SER VAL PHE TYR SEQRES 29 A 484 ALA ASP TYR TYR GLY ALA GLN TYR SER ASP LYS GLY HIS SEQRES 30 A 484 ASP ILE ASN MET VAL LYS VAL PRO TYR ILE GLU GLU LEU SEQRES 31 A 484 VAL THR LEU ARG LYS ASP TYR ALA TYR GLY LYS GLN HIS SEQRES 32 A 484 SER TYR LEU ASP HIS TRP ASP VAL ILE GLY TRP THR ARG SEQRES 33 A 484 GLU GLY ASP ALA LYS HIS PRO HIS SER MET ALA VAL ILE SEQRES 34 A 484 MET SER ASP GLY PRO GLY GLY SER LYS TRP MET TYR THR SEQRES 35 A 484 GLY LYS PRO SER ALA ARG TYR VAL ASP LYS LEU GLY ILE SEQRES 36 A 484 ARG THR GLU GLU VAL TRP THR ASP ALA ASN GLY TRP ALA SEQRES 37 A 484 GLU PHE PRO VAL ASN GLY GLY SER VAL SER VAL TRP VAL SEQRES 38 A 484 SER VAL GLU SEQRES 1 B 484 ALA GLN ASN GLY THR MET MET GLN TYR PHE HIS TRP TYR SEQRES 2 B 484 VAL PRO ASN ASP GLY ALA LEU TRP THR GLN VAL GLU ASN SEQRES 3 B 484 ASN ALA SER ALA LEU SER ASP ASN GLY PHE THR ALA LEU SEQRES 4 B 484 TRP LEU PRO PRO ALA TYR LYS GLY ALA GLY GLY SER ASN SEQRES 5 B 484 ASP VAL GLY TYR GLY VAL TYR ASP MET TYR ASP LEU GLY SEQRES 6 B 484 GLU PHE ASP GLN GLN GLY SER VAL ARG THR LYS TYR GLY SEQRES 7 B 484 THR LYS ASP GLN TYR LEU SER ALA ILE ASN THR ALA HIS SEQRES 8 B 484 LYS ASN ASN ILE GLN ILE TYR GLY ASP VAL VAL PHE ASN SEQRES 9 B 484 HIS ARG GLY GLY ALA ASP GLY LYS SER TRP VAL ASP THR SEQRES 10 B 484 LYS ARG VAL ASP TRP ASN ASN ARG ASN ILE GLU LEU GLY SEQRES 11 B 484 ASP LYS TRP ILE GLU ALA TRP VAL GLU PHE ASP PHE PRO SEQRES 12 B 484 GLY ARG ASN ASP LYS TYR SER ASN PHE HIS TRP THR TRP SEQRES 13 B 484 TYR HIS PHE ASP GLY VAL ASP TRP ASP ASP ALA GLY GLU SEQRES 14 B 484 GLU LYS ALA ILE PHE LYS PHE LYS GLY GLU GLY LYS ALA SEQRES 15 B 484 TRP ASP TRP GLU VAL SER SER GLU LYS GLY ASN TYR ASP SEQRES 16 B 484 TYR LEU MET TYR ALA ASP LEU ASP MET ASP HIS PRO GLU SEQRES 17 B 484 VAL LYS GLN GLU LEU LYS ASP TRP GLY GLU TRP TYR ILE SEQRES 18 B 484 ASN MET THR GLY VAL ASP GLY PHE ARG MET ASP ALA VAL SEQRES 19 B 484 LYS HIS ILE LYS TYR GLN TYR LEU GLN GLU TRP ILE ASP SEQRES 20 B 484 HIS LEU ARG TRP LYS THR GLY LYS GLU LEU PHE THR VAL SEQRES 21 B 484 GLY GLU TYR TRP ASN TYR ASP VAL ASN GLN LEU HIS ASN SEQRES 22 B 484 PHE ILE THR LYS THR SER GLY SER MET SER LEU PHE ASP SEQRES 23 B 484 ALA PRO LEU HIS MET ASN PHE TYR ASN ALA SER LYS SER SEQRES 24 B 484 GLY GLY SER TYR ASP MET ARG GLN ILE MET ASP GLY THR SEQRES 25 B 484 LEU MET LYS ASP ASN SER VAL LYS ALA VAL THR LEU VAL SEQRES 26 B 484 GLU ASN HIS ASP THR GLN PRO LEU GLN ALA LEU GLU SER SEQRES 27 B 484 THR VAL ASP TRP TRP PHE LYS PRO LEU ALA TYR ALA PHE SEQRES 28 B 484 ILE LEU LEU ARG GLU GLU GLY TYR PRO SER VAL PHE TYR SEQRES 29 B 484 ALA ASP TYR TYR GLY ALA GLN TYR SER ASP LYS GLY HIS SEQRES 30 B 484 ASP ILE ASN MET VAL LYS VAL PRO TYR ILE GLU GLU LEU SEQRES 31 B 484 VAL THR LEU ARG LYS ASP TYR ALA TYR GLY LYS GLN HIS SEQRES 32 B 484 SER TYR LEU ASP HIS TRP ASP VAL ILE GLY TRP THR ARG SEQRES 33 B 484 GLU GLY ASP ALA LYS HIS PRO HIS SER MET ALA VAL ILE SEQRES 34 B 484 MET SER ASP GLY PRO GLY GLY SER LYS TRP MET TYR THR SEQRES 35 B 484 GLY LYS PRO SER ALA ARG TYR VAL ASP LYS LEU GLY ILE SEQRES 36 B 484 ARG THR GLU GLU VAL TRP THR ASP ALA ASN GLY TRP ALA SEQRES 37 B 484 GLU PHE PRO VAL ASN GLY GLY SER VAL SER VAL TRP VAL SEQRES 38 B 484 SER VAL GLU HET CA A 501 1 HET CA A 502 1 HET CA A 503 1 HET NA A 504 1 HET TRS A 505 8 HET CA B 501 1 HET CA B 502 1 HET CA B 503 1 HET NA B 504 1 HET TRS B 505 8 HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 3 CA 6(CA 2+) FORMUL 6 NA 2(NA 1+) FORMUL 7 TRS 2(C4 H12 N O3 1+) FORMUL 13 HOH *968(H2 O) HELIX 1 AA1 ALA A 23 GLY A 39 1 17 HELIX 2 AA2 GLY A 53 ASP A 57 5 5 HELIX 3 AA3 THR A 83 ASN A 97 1 15 HELIX 4 AA4 PHE A 146 ASN A 150 5 5 HELIX 5 AA5 THR A 159 TYR A 161 5 3 HELIX 6 AA6 HIS A 210 GLY A 229 1 20 HELIX 7 AA7 ALA A 237 ILE A 241 5 5 HELIX 8 AA8 LYS A 242 GLY A 258 1 17 HELIX 9 AA9 ASP A 271 THR A 282 1 12 HELIX 10 AB1 ASP A 290 LYS A 302 1 13 HELIX 11 AB2 ASP A 308 ILE A 312 5 5 HELIX 12 AB3 THR A 316 ASN A 321 1 6 HELIX 13 AB4 ASP A 345 TRP A 347 5 3 HELIX 14 AB5 PHE A 348 ARG A 359 1 12 HELIX 15 AB6 TYR A 368 GLY A 373 1 6 HELIX 16 AB7 TYR A 390 TYR A 401 1 12 HELIX 17 AB8 ALA B 23 GLY B 39 1 17 HELIX 18 AB9 GLY B 53 ASP B 57 5 5 HELIX 19 AC1 THR B 83 ASN B 97 1 15 HELIX 20 AC2 THR B 159 TYR B 161 5 3 HELIX 21 AC3 HIS B 210 GLY B 229 1 20 HELIX 22 AC4 ALA B 237 ILE B 241 5 5 HELIX 23 AC5 LYS B 242 GLY B 258 1 17 HELIX 24 AC6 ASP B 271 THR B 282 1 12 HELIX 25 AC7 ASP B 290 SER B 303 1 14 HELIX 26 AC8 ASP B 308 ILE B 312 5 5 HELIX 27 AC9 THR B 316 ASN B 321 1 6 HELIX 28 AD1 ASP B 345 TRP B 347 5 3 HELIX 29 AD2 PHE B 348 ARG B 359 1 12 HELIX 30 AD3 TYR B 368 GLY B 373 1 6 HELIX 31 AD4 TYR B 390 ALA B 402 1 13 SHEET 1 AA1 9 MET A 10 GLN A 12 0 SHEET 2 AA1 9 ALA A 42 LEU A 45 1 O TRP A 44 N MET A 11 SHEET 3 AA1 9 GLN A 100 VAL A 105 1 O TYR A 102 N LEU A 43 SHEET 4 AA1 9 GLY A 232 MET A 235 1 O ARG A 234 N VAL A 105 SHEET 5 AA1 9 PHE A 262 GLY A 265 1 O VAL A 264 N MET A 235 SHEET 6 AA1 9 SER A 287 PHE A 289 1 O SER A 287 N GLY A 265 SHEET 7 AA1 9 ALA A 325 THR A 327 1 O VAL A 326 N LEU A 288 SHEET 8 AA1 9 TYR A 363 PHE A 367 1 O TYR A 363 N ALA A 325 SHEET 9 AA1 9 MET A 10 GLN A 12 1 N MET A 10 O PRO A 364 SHEET 1 AA2 2 LYS A 50 GLY A 51 0 SHEET 2 AA2 2 VAL A 62 ASP A 64 -1 O TYR A 63 N LYS A 50 SHEET 1 AA3 6 HIS A 109 ARG A 110 0 SHEET 2 AA3 6 ALA A 204 LEU A 206 -1 O ALA A 204 N ARG A 110 SHEET 3 AA3 6 PHE A 163 ASP A 169 -1 N ASP A 164 O ASP A 205 SHEET 4 AA3 6 GLU A 174 PHE A 180 -1 O PHE A 178 N VAL A 166 SHEET 5 AA3 6 GLY A 115 VAL A 124 -1 N LYS A 122 O LYS A 179 SHEET 6 AA3 6 GLU A 132 GLU A 143 -1 O LEU A 133 N ARG A 123 SHEET 1 AA4 2 ALA A 374 ASP A 378 0 SHEET 2 AA4 2 HIS A 381 MET A 385 -1 O ILE A 383 N TYR A 376 SHEET 1 AA5 6 GLN A 406 TYR A 409 0 SHEET 2 AA5 6 VAL A 415 ARG A 420 -1 O GLY A 417 N TYR A 409 SHEET 3 AA5 6 SER A 429 SER A 435 -1 O VAL A 432 N TRP A 418 SHEET 4 AA5 6 SER A 480 SER A 486 -1 O SER A 482 N ILE A 433 SHEET 5 AA5 6 ARG A 452 ASP A 455 -1 N VAL A 454 O VAL A 485 SHEET 6 AA5 6 VAL A 464 TRP A 465 -1 O VAL A 464 N TYR A 453 SHEET 1 AA6 2 GLY A 440 TYR A 445 0 SHEET 2 AA6 2 TRP A 471 VAL A 476 -1 O PHE A 474 N LYS A 442 SHEET 1 AA7 9 MET B 10 GLN B 12 0 SHEET 2 AA7 9 ALA B 42 LEU B 45 1 O TRP B 44 N MET B 11 SHEET 3 AA7 9 GLN B 100 VAL B 105 1 O TYR B 102 N LEU B 43 SHEET 4 AA7 9 GLY B 232 MET B 235 1 O ARG B 234 N VAL B 105 SHEET 5 AA7 9 PHE B 262 GLY B 265 1 O VAL B 264 N MET B 235 SHEET 6 AA7 9 SER B 287 PHE B 289 1 O SER B 287 N GLY B 265 SHEET 7 AA7 9 ALA B 325 THR B 327 1 O VAL B 326 N LEU B 288 SHEET 8 AA7 9 TYR B 363 PHE B 367 1 O SER B 365 N THR B 327 SHEET 9 AA7 9 MET B 10 GLN B 12 1 N MET B 10 O PRO B 364 SHEET 1 AA8 2 LYS B 50 GLY B 51 0 SHEET 2 AA8 2 VAL B 62 ASP B 64 -1 O TYR B 63 N LYS B 50 SHEET 1 AA9 6 HIS B 109 ARG B 110 0 SHEET 2 AA9 6 ALA B 204 LEU B 206 -1 O ALA B 204 N ARG B 110 SHEET 3 AA9 6 PHE B 163 ASP B 169 -1 N ASP B 164 O ASP B 205 SHEET 4 AA9 6 GLU B 174 PHE B 180 -1 O PHE B 178 N VAL B 166 SHEET 5 AA9 6 GLY B 115 VAL B 124 -1 N LYS B 122 O LYS B 179 SHEET 6 AA9 6 GLU B 132 GLU B 143 -1 O LEU B 133 N ARG B 123 SHEET 1 AB1 2 ALA B 374 ASP B 378 0 SHEET 2 AB1 2 HIS B 381 MET B 385 -1 O ILE B 383 N TYR B 376 SHEET 1 AB2 6 GLN B 406 TYR B 409 0 SHEET 2 AB2 6 VAL B 415 ARG B 420 -1 O GLY B 417 N TYR B 409 SHEET 3 AB2 6 MET B 430 SER B 435 -1 O VAL B 432 N TRP B 418 SHEET 4 AB2 6 SER B 480 SER B 486 -1 O TRP B 484 N ALA B 431 SHEET 5 AB2 6 ARG B 452 ASP B 455 -1 N VAL B 454 O VAL B 485 SHEET 6 AB2 6 VAL B 464 TRP B 465 -1 O VAL B 464 N TYR B 453 SHEET 1 AB3 2 GLY B 440 TYR B 445 0 SHEET 2 AB3 2 TRP B 471 VAL B 476 -1 O ALA B 472 N MET B 444 LINK OD1 ASN A 108 CA CA A 503 1555 1555 2.35 LINK OD1 ASP A 164 CA CA A 502 1555 1555 2.52 LINK OD2 ASP A 164 CA CA A 502 1555 1555 2.46 LINK OD2 ASP A 164 NA NA A 504 1555 1555 2.35 LINK O ALA A 186 CA CA A 502 1555 1555 2.29 LINK OD1 ASP A 188 CA CA A 502 1555 1555 2.28 LINK OD2 ASP A 188 NA NA A 504 1555 1555 2.43 LINK O ASP A 199 CA CA A 503 1555 1555 2.32 LINK OD1 ASP A 199 CA CA A 503 1555 1555 2.31 LINK OD1 ASP A 199 NA NA A 504 1555 1555 2.82 LINK OD2 ASP A 199 NA NA A 504 1555 1555 2.30 LINK OD1 ASP A 205 CA CA A 503 1555 1555 2.32 LINK OD2 ASP A 205 NA NA A 504 1555 1555 2.32 LINK O LEU A 206 NA NA A 504 1555 1555 2.42 LINK OD1 ASP A 207 CA CA A 502 1555 1555 2.37 LINK O HIS A 240 CA CA A 503 1555 1555 2.37 LINK O GLY A 305 CA CA A 501 1555 1555 2.32 LINK O TYR A 307 CA CA A 501 1555 1555 2.30 LINK O TRP A 413 CA CA A 501 1555 1555 2.34 LINK OD1 ASP A 414 CA CA A 501 1555 1555 2.35 LINK OD1 ASP A 436 CA CA A 501 1555 1555 2.46 LINK OD2 ASP A 436 CA CA A 501 1555 1555 2.60 LINK CA CA A 501 O HOH A 908 1555 1555 2.33 LINK CA CA A 502 O HOH A 625 1555 1555 2.45 LINK CA CA A 502 O HOH A 825 1555 1555 2.44 LINK CA CA A 503 O HOH A 814 1555 1555 2.40 LINK OD1 ASN B 108 CA CA B 502 1555 1555 2.35 LINK OD1 ASP B 164 CA CA B 503 1555 1555 2.49 LINK OD2 ASP B 164 CA CA B 503 1555 1555 2.42 LINK OD2 ASP B 164 NA NA B 504 1555 1555 2.36 LINK O ALA B 186 CA CA B 503 1555 1555 2.35 LINK OD1 ASP B 188 CA CA B 503 1555 1555 2.33 LINK OD2 ASP B 188 NA NA B 504 1555 1555 2.45 LINK O ASP B 199 CA CA B 502 1555 1555 2.31 LINK OD1 ASP B 199 CA CA B 502 1555 1555 2.29 LINK OD1 ASP B 199 NA NA B 504 1555 1555 2.93 LINK OD2 ASP B 199 NA NA B 504 1555 1555 2.31 LINK OD1 ASP B 205 CA CA B 502 1555 1555 2.30 LINK OD2 ASP B 205 NA NA B 504 1555 1555 2.44 LINK O LEU B 206 NA NA B 504 1555 1555 2.38 LINK OD1 ASP B 207 CA CA B 503 1555 1555 2.29 LINK O HIS B 240 CA CA B 502 1555 1555 2.31 LINK O GLY B 305 CA CA B 501 1555 1555 2.33 LINK O TYR B 307 CA CA B 501 1555 1555 2.34 LINK O TRP B 413 CA CA B 501 1555 1555 2.40 LINK OD1 ASP B 414 CA CA B 501 1555 1555 2.35 LINK OD1 ASP B 436 CA CA B 501 1555 1555 2.49 LINK OD2 ASP B 436 CA CA B 501 1555 1555 2.55 LINK CA CA B 501 O HOH B 936 1555 1555 2.40 LINK CA CA B 502 O HOH B 848 1555 1555 2.35 LINK CA CA B 503 O HOH B 718 1555 1555 2.41 LINK CA CA B 503 O HOH B 901 1555 1555 2.35 CISPEP 1 TRP A 189 GLU A 190 0 8.55 CISPEP 2 TRP B 189 GLU B 190 0 6.06 CRYST1 93.785 55.495 106.755 90.00 91.29 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010663 0.000000 0.000240 0.00000 SCALE2 0.000000 0.018020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009370 0.00000