data_8JJS # _entry.id 8JJS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8JJS pdb_00008jjs 10.2210/pdb8jjs/pdb WWPDB D_1300038068 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8JJS _pdbx_database_status.recvd_initial_deposition_date 2023-05-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Irie, M.' 1 0000-0001-7487-3881 'Fukami, T.A.' 2 0000-0001-7115-673X 'Tanada, M.' 3 0000-0002-5474-9274 'Ohta, A.' 4 0000-0002-5703-8451 'Torizawa, T.' 5 0000-0001-7537-6123 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 145 _citation.language ? _citation.page_first 16610 _citation.page_last 16620 _citation.title 'Development of Orally Bioavailable Peptides Targeting an Intracellular Protein: From a Hit to a Clinical KRAS Inhibitor.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.3c03886 _citation.pdbx_database_id_PubMed 37463267 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tanada, M.' 1 ? primary 'Tamiya, M.' 2 ? primary 'Matsuo, A.' 3 ? primary 'Chiyoda, A.' 4 ? primary 'Takano, K.' 5 ? primary 'Ito, T.' 6 ? primary 'Irie, M.' 7 ? primary 'Kotake, T.' 8 ? primary 'Takeyama, R.' 9 ? primary 'Kawada, H.' 10 ? primary 'Hayashi, R.' 11 ? primary 'Ishikawa, S.' 12 ? primary 'Nomura, K.' 13 ? primary 'Furuichi, N.' 14 ? primary 'Morita, Y.' 15 ? primary 'Kage, M.' 16 ? primary 'Hashimoto, S.' 17 ? primary 'Nii, K.' 18 ? primary 'Sase, H.' 19 ? primary 'Ohara, K.' 20 ? primary 'Ohta, A.' 21 ? primary 'Kuramoto, S.' 22 ? primary 'Nishimura, Y.' 23 ? primary 'Iikura, H.' 24 ? primary 'Shiraishi, T.' 25 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8JJS _cell.details ? _cell.formula_units_Z ? _cell.length_a 66.596 _cell.length_a_esd ? _cell.length_b 66.596 _cell.length_b_esd ? _cell.length_c 86.613 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8JJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Isoform 2B of GTPase KRas' 20150.582 1 ? G12D ? ? 2 polymer syn MAA-ILE-SAR-SAR-7T2-SAR-IAE-LEU-MEA-MLE-7TK 1424.091 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 6 water nat water 18.015 122 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSSGGSTEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG EGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDA FYTLVREIRKHKEKMSKDG ; ;GSSGGSTEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG EGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDA FYTLVREIRKHKEKMSKDG ; A ? 2 'polypeptide(L)' no yes '(MAA)I(SAR)(SAR)(7T2)(SAR)(IAE)L(MEA)(MLE)(7TK)' AIGGFGFLFLD I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 GLY n 1 6 SER n 1 7 THR n 1 8 GLU n 1 9 TYR n 1 10 LYS n 1 11 LEU n 1 12 VAL n 1 13 VAL n 1 14 VAL n 1 15 GLY n 1 16 ALA n 1 17 ASP n 1 18 GLY n 1 19 VAL n 1 20 GLY n 1 21 LYS n 1 22 SER n 1 23 ALA n 1 24 LEU n 1 25 THR n 1 26 ILE n 1 27 GLN n 1 28 LEU n 1 29 ILE n 1 30 GLN n 1 31 ASN n 1 32 HIS n 1 33 PHE n 1 34 VAL n 1 35 ASP n 1 36 GLU n 1 37 TYR n 1 38 ASP n 1 39 PRO n 1 40 THR n 1 41 ILE n 1 42 GLU n 1 43 ASP n 1 44 SER n 1 45 TYR n 1 46 ARG n 1 47 LYS n 1 48 GLN n 1 49 VAL n 1 50 VAL n 1 51 ILE n 1 52 ASP n 1 53 GLY n 1 54 GLU n 1 55 THR n 1 56 CYS n 1 57 LEU n 1 58 LEU n 1 59 ASP n 1 60 ILE n 1 61 LEU n 1 62 ASP n 1 63 THR n 1 64 ALA n 1 65 GLY n 1 66 GLN n 1 67 GLU n 1 68 GLU n 1 69 TYR n 1 70 SER n 1 71 ALA n 1 72 MET n 1 73 ARG n 1 74 ASP n 1 75 GLN n 1 76 TYR n 1 77 MET n 1 78 ARG n 1 79 THR n 1 80 GLY n 1 81 GLU n 1 82 GLY n 1 83 PHE n 1 84 LEU n 1 85 CYS n 1 86 VAL n 1 87 PHE n 1 88 ALA n 1 89 ILE n 1 90 ASN n 1 91 ASN n 1 92 THR n 1 93 LYS n 1 94 SER n 1 95 PHE n 1 96 GLU n 1 97 ASP n 1 98 ILE n 1 99 HIS n 1 100 HIS n 1 101 TYR n 1 102 ARG n 1 103 GLU n 1 104 GLN n 1 105 ILE n 1 106 LYS n 1 107 ARG n 1 108 VAL n 1 109 LYS n 1 110 ASP n 1 111 SER n 1 112 GLU n 1 113 ASP n 1 114 VAL n 1 115 PRO n 1 116 MET n 1 117 VAL n 1 118 LEU n 1 119 VAL n 1 120 GLY n 1 121 ASN n 1 122 LYS n 1 123 CYS n 1 124 ASP n 1 125 LEU n 1 126 PRO n 1 127 SER n 1 128 ARG n 1 129 THR n 1 130 VAL n 1 131 ASP n 1 132 THR n 1 133 LYS n 1 134 GLN n 1 135 ALA n 1 136 GLN n 1 137 ASP n 1 138 LEU n 1 139 ALA n 1 140 ARG n 1 141 SER n 1 142 TYR n 1 143 GLY n 1 144 ILE n 1 145 PRO n 1 146 PHE n 1 147 ILE n 1 148 GLU n 1 149 THR n 1 150 SER n 1 151 ALA n 1 152 LYS n 1 153 THR n 1 154 ARG n 1 155 GLN n 1 156 GLY n 1 157 VAL n 1 158 ASP n 1 159 ASP n 1 160 ALA n 1 161 PHE n 1 162 TYR n 1 163 THR n 1 164 LEU n 1 165 VAL n 1 166 ARG n 1 167 GLU n 1 168 ILE n 1 169 ARG n 1 170 LYS n 1 171 HIS n 1 172 LYS n 1 173 GLU n 1 174 LYS n 1 175 MET n 1 176 SER n 1 177 LYS n 1 178 ASP n 1 179 GLY n 2 1 MAA n 2 2 ILE n 2 3 SAR n 2 4 SAR n 2 5 7T2 n 2 6 SAR n 2 7 IAE n 2 8 LEU n 2 9 MEA n 2 10 MLE n 2 11 7TK n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 179 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Tuner(DE3)pLacI' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 11 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP RASK_HUMAN P01116 P01116-2 1 ;TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCV FAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVR EIRKHKEKMSKDG ; 2 2 PDB 8JJS 8JJS ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8JJS A 7 ? 179 ? P01116 2 ? 174 ? 2 174 2 2 8JJS I 1 ? 11 ? 8JJS 1 ? 11 ? 1 11 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8JJS GLY A 1 ? UNP P01116 ? ? 'expression tag' -4 1 1 8JJS SER A 2 ? UNP P01116 ? ? 'expression tag' -3 2 1 8JJS SER A 3 ? UNP P01116 ? ? 'expression tag' -2 3 1 8JJS GLY A 4 ? UNP P01116 ? ? 'expression tag' -1 4 1 8JJS GLY A 5 ? UNP P01116 ? ? 'expression tag' 0 5 1 8JJS SER A 6 ? UNP P01116 ? ? 'expression tag' 1 6 1 8JJS ASP A 17 ? UNP P01116 GLY 12 'engineered mutation' 12 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 7T2 'L-peptide linking' n '(2S)-3-(4-chlorophenyl)-2-(methylamino)propanoic acid' ? 'C10 H12 Cl N O2' 213.661 7TK 'L-peptide linking' n '(3S)-3-azanyl-4-oxidanylidene-4-pyrrolidin-1-yl-butanoic acid' ? 'C8 H14 N2 O3' 186.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 IAE 'L-peptide linking' n '(2S)-2-azanyl-4-[4-(trifluoromethyl)phenyl]butanoic acid' ? 'C11 H12 F3 N O2' 247.214 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAA 'L-peptide linking' n N-methyl-L-alanine ? 'C4 H9 N O2' 103.120 MEA 'L-peptide linking' n N-METHYLPHENYLALANINE ? 'C10 H13 N O2' 179.216 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MLE 'L-peptide linking' n N-METHYLLEUCINE ? 'C7 H15 N O2' 145.199 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAR 'peptide linking' n SARCOSINE ? 'C3 H7 N O2' 89.093 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8JJS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.0 M Ammonium sulfate, 25 %(v/v) Ethylene glycol as cryoprotectant' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 4M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-12-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.045000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-1A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.045000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-1A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8JJS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.534 _reflns.d_resolution_low 57.674 _reflns.details ;Some remarks regarding the mmCIF items written, the PDB Exchange Dictionary (PDBx/mmCIF) Version 5.0 supporting the data files in the current PDB archive (dictionary version 5.325, last updated 2020-04-13: http://mmcif.wwpdb.org/dictionaries/mmcif_pdbx_v50.dic/Index/) and the actual quantities provided by MRFANA (https://github.com/githubgphl/MRFANA) from the autoPROC package (https://www.globalphasing.com/autoproc/). In general, the mmCIF categories here should provide items that are currently used in the PDB archive. If there are alternatives, the one recommended by the PDB developers has been selected. The distinction between *_all and *_obs quantities is not always clear: often only one version is actively used within the PDB archive (or is the one recommended by PDB developers). The intention of distinguishing between classes of reflections before and after some kind of observation criterion was applied, can in principle be useful - but such criteria change in various ways throughout the data processing steps (rejection of overloaded or too partial reflections, outlier/misfit rejections during scaling etc) and there is no retrospect computation of data scaling/merging statistics for the reflections used in the final refinement (where another observation criterion might have been applied). Typical data processing will usually only provide one version of statistics at various stages and these are given in the recommended item here, irrespective of the "_all" and "_obs" connotation, see e.g. the use of _reflns.pdbx_Rmerge_I_obs, _reflns.pdbx_Rrim_I_all and _reflns.pdbx_Rpim_I_all. Please note that all statistics related to "merged intensities" (or "merging") are based on inverse-variance weighting of the individual measurements making up a symmetry-unique reflection. This is standard for several decades now, even if some of the dictionary definitions seem to suggest that a simple "mean" or "average" intensity is being used instead. R-values are always given for all symmetry-equivalent reflections following Friedel's law, i.e. Bijvoet pairs are not treated separately (since we want to describe the overall mean intensity and not the mean I(+) and I(-) here). The Rrim metric is identical to the Rmeas R-value and only differs in name. _reflns.pdbx_number_measured_all is the number of measured intensities just before the final merging step (at which point no additional rejection takes place). _reflns.number_obs is the number of symmetry-unique observations, i.e. the result of merging those measurements via inverse-variance weighting. _reflns.pdbx_netI_over_sigmaI is based on the merged intensities (_reflns.number_obs) as expected. _reflns.pdbx_redundancy is synonymous with "multiplicity". The per-shell item _reflns_shell.number_measured_all corresponds to the overall value _reflns.pdbx_number_measured_all. The per-shell item _reflns_shell.number_unique_all corresponds to the overall value _reflns.number_obs. The per-shell item _reflns_shell.percent_possible_all corresponds to the overall value _reflns.percent_possible_obs. The per-shell item _reflns_shell.meanI_over_sigI_obs corresponds to the overall value given as _reflns.pdbx_netI_over_sigmaI. But be aware of the incorrect definition of the former in the current dictionary! ; _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21593 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20.49 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.10 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.1065 _reflns.pdbx_Rpim_I_all 0.0232 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 442425 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.1040 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] 1.00000 _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] 1.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] 1.00000 _reflns.pdbx_aniso_diffraction_limit_1 1.85600 _reflns.pdbx_aniso_diffraction_limit_2 1.85600 _reflns.pdbx_aniso_diffraction_limit_3 1.49900 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] 1.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] 1.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] 1.0000 _reflns.pdbx_aniso_B_tensor_eigenvalue_1 30.8 _reflns.pdbx_aniso_B_tensor_eigenvalue_2 30.8 _reflns.pdbx_aniso_B_tensor_eigenvalue_3 17.8 _reflns.pdbx_orthogonalization_convention pdb _reflns.pdbx_percent_possible_ellipsoidal 95.0 _reflns.pdbx_percent_possible_spherical 66.2 _reflns.pdbx_percent_possible_ellipsoidal_anomalous 94.4 _reflns.pdbx_percent_possible_spherical_anomalous 65.8 _reflns.pdbx_redundancy_anomalous 10.42 _reflns.pdbx_CC_half_anomalous -0.329 _reflns.pdbx_absDiff_over_sigma_anomalous 0.743 _reflns.pdbx_percent_possible_anomalous 94.4 _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 4.808 57.674 ? 71.52 22624 22624 ? 1080 1080 ? ? ? ? ? ? ? ? ? ? ? 20.95 ? ? ? 0.0367 0.0080 ? 1 ? 0.999 ? ? 99.9 ? 0.0358 ? 99.9 99.9 99.5 99.5 10.98 -0.567 0.818 99.5 3.819 4.808 ? 68.84 23796 23796 ? 1082 1082 ? ? ? ? ? ? ? ? ? ? ? 21.99 ? ? ? 0.0404 0.0086 ? 2 ? 0.999 ? ? 100.0 ? 0.0395 ? 100.0 100.0 100.0 100.0 11.28 -0.449 0.750 100.0 3.326 3.819 ? 55.19 23893 23893 ? 1075 1075 ? ? ? ? ? ? ? ? ? ? ? 22.23 ? ? ? 0.0543 0.0115 ? 3 ? 0.999 ? ? 100.0 ? 0.0531 ? 100.0 100.0 100.0 100.0 11.32 -0.354 0.784 100.0 3.020 3.326 ? 39.69 24123 24123 ? 1078 1078 ? ? ? ? ? ? ? ? ? ? ? 22.38 ? ? ? 0.0770 0.0162 ? 4 ? 0.999 ? ? 100.0 ? 0.0753 ? 100.0 100.0 100.0 100.0 11.42 -0.307 0.773 100.0 2.801 3.020 ? 29.98 24175 24175 ? 1084 1084 ? ? ? ? ? ? ? ? ? ? ? 22.30 ? ? ? 0.1099 0.0233 ? 5 ? 0.997 ? ? 100.0 ? 0.1073 ? 100.0 100.0 100.0 100.0 11.32 -0.209 0.786 100.0 2.638 2.801 ? 20.45 20873 20873 ? 1079 1079 ? ? ? ? ? ? ? ? ? ? ? 19.34 ? ? ? 0.1444 0.0327 ? 6 ? 0.996 ? ? 100.0 ? 0.1406 ? 100.0 100.0 100.0 100.0 9.88 -0.113 0.781 100.0 2.504 2.638 ? 16.62 19301 19301 ? 1081 1081 ? ? ? ? ? ? ? ? ? ? ? 17.85 ? ? ? 0.1746 0.0412 ? 7 ? 0.994 ? ? 100.0 ? 0.1696 ? 100.0 100.0 100.0 100.0 9.10 -0.115 0.776 100.0 2.393 2.504 ? 14.31 20618 20618 ? 1077 1077 ? ? ? ? ? ? ? ? ? ? ? 19.14 ? ? ? 0.2203 0.0503 ? 8 ? 0.993 ? ? 100.0 ? 0.2144 ? 100.0 100.0 100.0 100.0 9.71 -0.015 0.777 100.0 2.301 2.393 ? 12.50 21863 21863 ? 1082 1082 ? ? ? ? ? ? ? ? ? ? ? 20.21 ? ? ? 0.2598 0.0577 ? 9 ? 0.994 ? ? 100.0 ? 0.2533 ? 100.0 100.0 100.0 100.0 10.22 -0.041 0.747 100.0 2.220 2.301 ? 10.17 22355 22355 ? 1078 1078 ? ? ? ? ? ? ? ? ? ? ? 20.74 ? ? ? 0.3456 0.0757 ? 10 ? 0.987 ? ? 100.0 ? 0.3371 ? 100.0 100.0 100.0 100.0 10.48 -0.055 0.764 100.0 2.151 2.220 ? 8.71 22776 22776 ? 1083 1083 ? ? ? ? ? ? ? ? ? ? ? 21.03 ? ? ? 0.4091 0.0889 ? 11 ? 0.986 ? ? 100.0 ? 0.3993 ? 100.0 100.0 100.0 100.0 10.63 -0.083 0.710 100.0 2.088 2.151 ? 7.22 22839 22839 ? 1078 1078 ? ? ? ? ? ? ? ? ? ? ? 21.19 ? ? ? 0.5033 0.1088 ? 12 ? 0.979 ? ? 100.0 ? 0.4913 ? 100.0 100.0 100.0 100.0 10.71 0.021 0.754 100.0 2.035 2.088 ? 5.62 22908 22908 ? 1077 1077 ? ? ? ? ? ? ? ? ? ? ? 21.27 ? ? ? 0.6552 0.1411 ? 13 ? 0.974 ? ? 100.0 ? 0.6397 ? 100.0 100.0 99.9 99.9 10.76 0.008 0.746 99.9 1.984 2.035 ? 4.51 23238 23238 ? 1082 1082 ? ? ? ? ? ? ? ? ? ? ? 21.48 ? ? ? 0.8265 0.1771 ? 14 ? 0.950 ? ? 100.0 ? 0.8072 ? 100.0 100.0 100.0 100.0 10.86 -0.036 0.710 100.0 1.940 1.984 ? 3.81 23201 23201 ? 1078 1078 ? ? ? ? ? ? ? ? ? ? ? 21.52 ? ? ? 0.9887 0.2115 ? 15 ? 0.940 ? ? 100.0 ? 0.9657 ? 100.0 100.0 100.0 100.0 10.88 -0.063 0.714 100.0 1.897 1.940 ? 3.03 23359 23359 ? 1079 1079 ? ? ? ? ? ? ? ? ? ? ? 21.65 ? ? ? 1.2546 0.2673 ? 16 ? 0.902 ? ? 99.7 ? 1.2256 ? 99.7 99.7 99.8 99.8 10.92 -0.078 0.683 99.8 1.855 1.897 ? 2.69 23358 23358 ? 1083 1083 ? ? ? ? ? ? ? ? ? ? ? 21.57 ? ? ? 1.4117 0.3008 ? 17 ? 0.895 ? ? 90.2 ? 1.3791 ? 90.2 90.2 91.0 91.0 10.85 -0.004 0.692 91.0 1.787 1.855 ? 3.05 21909 21909 ? 1081 1081 ? ? ? ? ? ? ? ? ? ? ? 20.27 ? ? ? 1.2140 0.2663 ? 18 ? 0.894 ? ? 72.4 ? 1.1842 ? 72.4 49.3 72.3 50.3 10.15 -0.085 0.724 72.3 1.694 1.787 ? 2.48 20255 20255 ? 1073 1073 ? ? ? ? ? ? ? ? ? ? ? 18.88 ? ? ? 1.3811 0.3125 ? 19 ? 0.829 ? ? 73.9 ? 1.3448 ? 73.9 30.0 73.7 30.5 9.46 -0.059 0.679 73.7 1.534 1.694 ? 1.74 14961 14961 ? 1083 1083 ? ? ? ? ? ? ? ? ? ? ? 13.81 ? ? ? 1.5931 0.4151 ? 20 ? 0.671 ? ? 81.9 ? 1.5359 ? 81.9 12.9 73.8 11.9 7.41 -0.024 0.704 73.8 # _refine.aniso_B[1][1] 0.3308 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.3308 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.6617 _refine.B_iso_max 77.550 _refine.B_iso_mean 27.0400 _refine.B_iso_min 10.440 _refine.correlation_coeff_Fo_to_Fc 0.9410 _refine.correlation_coeff_Fo_to_Fc_free 0.9320 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8JJS _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.5340 _refine.ls_d_res_low 57.6700 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21593 _refine.ls_number_reflns_R_free 1056 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 66.3000 _refine.ls_percent_reflns_R_free 4.8900 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2217 _refine.ls_R_factor_R_free 0.2421 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2207 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.1160 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.1160 _refine.pdbx_overall_SU_R_Blow_DPI 0.1280 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.1260 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 8JJS _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.260 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.5340 _refine_hist.d_res_low 57.6700 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 1609 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 180 _refine_hist.pdbx_B_iso_mean_ligand 36.99 _refine_hist.pdbx_B_iso_mean_solvent 35.82 _refine_hist.pdbx_number_atoms_protein 1443 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 44 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 559 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 260 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1510 ? t_it 10.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 195 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1440 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.007 ? 1510 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.920 ? 2054 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.400 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 15.330 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.5340 _refine_ls_shell.d_res_low 1.6200 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 21 _refine_ls_shell.number_reflns_R_work 411 _refine_ls_shell.percent_reflns_obs 8.5200 _refine_ls_shell.percent_reflns_R_free 4.8600 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2770 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.2334 # _struct.entry_id 8JJS _struct.title 'Human K-Ras G12D (GDP-bound) in complex with cyclic peptide inhibitor AP10343' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8JJS _struct_keywords.text 'CYCLIC PEPTIDE, ONCOLOGY, SIGNALING PROTEIN-INHIBITOR COMPLEX' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN/INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 20 ? ASN A 31 ? GLY A 15 ASN A 26 1 ? 12 HELX_P HELX_P2 AA2 SER A 70 ? GLY A 80 ? SER A 65 GLY A 75 1 ? 11 HELX_P HELX_P3 AA3 ASN A 91 ? ASP A 97 ? ASN A 86 ASP A 92 1 ? 7 HELX_P HELX_P4 AA4 ASP A 97 ? ASP A 110 ? ASP A 92 ASP A 105 1 ? 14 HELX_P HELX_P5 AA5 ASP A 131 ? GLY A 143 ? ASP A 126 GLY A 138 1 ? 13 HELX_P HELX_P6 AA6 GLY A 156 ? LYS A 174 ? GLY A 151 LYS A 169 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B MAA 1 C ? ? ? 1_555 B ILE 2 N ? ? I MAA 1 I ILE 2 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? B MAA 1 N ? ? ? 1_555 B 7TK 11 CG ? ? I MAA 1 I 7TK 11 1_555 ? ? ? ? ? ? ? 1.359 ? ? covale3 covale both ? B ILE 2 C ? ? ? 1_555 B SAR 3 N ? ? I ILE 2 I SAR 3 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale4 covale both ? B SAR 3 C ? ? ? 1_555 B SAR 4 N ? ? I SAR 3 I SAR 4 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale5 covale both ? B SAR 4 C ? ? ? 1_555 B 7T2 5 N ? ? I SAR 4 I 7T2 5 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale6 covale both ? B 7T2 5 C ? ? ? 1_555 B SAR 6 N ? ? I 7T2 5 I SAR 6 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale7 covale both ? B SAR 6 C ? ? ? 1_555 B IAE 7 N ? ? I SAR 6 I IAE 7 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? B IAE 7 C ? ? ? 1_555 B LEU 8 N ? ? I IAE 7 I LEU 8 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale9 covale both ? B LEU 8 C ? ? ? 1_555 B MEA 9 N ? ? I LEU 8 I MEA 9 1_555 ? ? ? ? ? ? ? 1.367 ? ? covale10 covale both ? B MEA 9 C ? ? ? 1_555 B MLE 10 N ? ? I MEA 9 I MLE 10 1_555 ? ? ? ? ? ? ? 1.357 ? ? covale11 covale one ? B MLE 10 C ? ? ? 1_555 B 7TK 11 N ? ? I MLE 10 I 7TK 11 1_555 ? ? ? ? ? ? ? 1.339 ? ? metalc1 metalc ? ? A SER 22 OG ? ? ? 1_555 D MG . MG ? ? A SER 17 A MG 202 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc2 metalc ? ? C GDP . O3B ? ? ? 1_555 D MG . MG ? ? A GDP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.048 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 202 A HOH 311 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 202 A HOH 313 1_555 ? ? ? ? ? ? ? 2.120 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 202 A HOH 336 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 202 A HOH 342 1_555 ? ? ? ? ? ? ? 2.014 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SAR 3 B . ? SAR 3 I SAR 4 B ? SAR 4 I 1 -7.19 2 7T2 5 B . ? 7T2 5 I SAR 6 B ? SAR 6 I 1 4.84 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 43 ? ILE A 51 ? ASP A 38 ILE A 46 AA1 2 GLU A 54 ? ASP A 62 ? GLU A 49 ASP A 57 AA1 3 THR A 7 ? GLY A 15 ? THR A 2 GLY A 10 AA1 4 GLY A 82 ? ALA A 88 ? GLY A 77 ALA A 83 AA1 5 MET A 116 ? ASN A 121 ? MET A 111 ASN A 116 AA1 6 PHE A 146 ? GLU A 148 ? PHE A 141 GLU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 43 ? N ASP A 38 O ASP A 62 ? O ASP A 57 AA1 2 3 O ASP A 59 ? O ASP A 54 N LEU A 11 ? N LEU A 6 AA1 3 4 N VAL A 14 ? N VAL A 9 O VAL A 86 ? O VAL A 81 AA1 4 5 N PHE A 87 ? N PHE A 82 O ASN A 121 ? O ASN A 116 AA1 5 6 N LEU A 118 ? N LEU A 113 O ILE A 147 ? O ILE A 142 # _atom_sites.entry_id 8JJS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.015016 _atom_sites.fract_transf_matrix[1][2] 0.008669 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017339 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011546 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL F MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 SER 2 -3 ? ? ? A . n A 1 3 SER 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 GLY 5 0 ? ? ? A . n A 1 6 SER 6 1 1 SER SER A . n A 1 7 THR 7 2 2 THR THR A . n A 1 8 GLU 8 3 3 GLU GLU A . n A 1 9 TYR 9 4 4 TYR TYR A . n A 1 10 LYS 10 5 5 LYS LYS A . n A 1 11 LEU 11 6 6 LEU LEU A . n A 1 12 VAL 12 7 7 VAL VAL A . n A 1 13 VAL 13 8 8 VAL VAL A . n A 1 14 VAL 14 9 9 VAL VAL A . n A 1 15 GLY 15 10 10 GLY GLY A . n A 1 16 ALA 16 11 11 ALA ALA A . n A 1 17 ASP 17 12 12 ASP ASP A . n A 1 18 GLY 18 13 13 GLY GLY A . n A 1 19 VAL 19 14 14 VAL VAL A . n A 1 20 GLY 20 15 15 GLY GLY A . n A 1 21 LYS 21 16 16 LYS LYS A . n A 1 22 SER 22 17 17 SER SER A . n A 1 23 ALA 23 18 18 ALA ALA A . n A 1 24 LEU 24 19 19 LEU LEU A . n A 1 25 THR 25 20 20 THR THR A . n A 1 26 ILE 26 21 21 ILE ILE A . n A 1 27 GLN 27 22 22 GLN GLN A . n A 1 28 LEU 28 23 23 LEU LEU A . n A 1 29 ILE 29 24 24 ILE ILE A . n A 1 30 GLN 30 25 25 GLN GLN A . n A 1 31 ASN 31 26 26 ASN ASN A . n A 1 32 HIS 32 27 27 HIS HIS A . n A 1 33 PHE 33 28 28 PHE PHE A . n A 1 34 VAL 34 29 29 VAL VAL A . n A 1 35 ASP 35 30 30 ASP ASP A . n A 1 36 GLU 36 31 31 GLU GLU A . n A 1 37 TYR 37 32 32 TYR TYR A . n A 1 38 ASP 38 33 33 ASP ASP A . n A 1 39 PRO 39 34 34 PRO PRO A . n A 1 40 THR 40 35 35 THR THR A . n A 1 41 ILE 41 36 36 ILE ILE A . n A 1 42 GLU 42 37 37 GLU GLU A . n A 1 43 ASP 43 38 38 ASP ASP A . n A 1 44 SER 44 39 39 SER SER A . n A 1 45 TYR 45 40 40 TYR TYR A . n A 1 46 ARG 46 41 41 ARG ARG A . n A 1 47 LYS 47 42 42 LYS LYS A . n A 1 48 GLN 48 43 43 GLN GLN A . n A 1 49 VAL 49 44 44 VAL VAL A . n A 1 50 VAL 50 45 45 VAL VAL A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 ASP 52 47 47 ASP ASP A . n A 1 53 GLY 53 48 48 GLY GLY A . n A 1 54 GLU 54 49 49 GLU GLU A . n A 1 55 THR 55 50 50 THR THR A . n A 1 56 CYS 56 51 51 CYS CYS A . n A 1 57 LEU 57 52 52 LEU LEU A . n A 1 58 LEU 58 53 53 LEU LEU A . n A 1 59 ASP 59 54 54 ASP ASP A . n A 1 60 ILE 60 55 55 ILE ILE A . n A 1 61 LEU 61 56 56 LEU LEU A . n A 1 62 ASP 62 57 57 ASP ASP A . n A 1 63 THR 63 58 58 THR THR A . n A 1 64 ALA 64 59 59 ALA ALA A . n A 1 65 GLY 65 60 60 GLY GLY A . n A 1 66 GLN 66 61 61 GLN GLN A . n A 1 67 GLU 67 62 62 GLU GLU A . n A 1 68 GLU 68 63 63 GLU GLU A . n A 1 69 TYR 69 64 64 TYR TYR A . n A 1 70 SER 70 65 65 SER SER A . n A 1 71 ALA 71 66 66 ALA ALA A . n A 1 72 MET 72 67 67 MET MET A . n A 1 73 ARG 73 68 68 ARG ARG A . n A 1 74 ASP 74 69 69 ASP ASP A . n A 1 75 GLN 75 70 70 GLN GLN A . n A 1 76 TYR 76 71 71 TYR TYR A . n A 1 77 MET 77 72 72 MET MET A . n A 1 78 ARG 78 73 73 ARG ARG A . n A 1 79 THR 79 74 74 THR THR A . n A 1 80 GLY 80 75 75 GLY GLY A . n A 1 81 GLU 81 76 76 GLU GLU A . n A 1 82 GLY 82 77 77 GLY GLY A . n A 1 83 PHE 83 78 78 PHE PHE A . n A 1 84 LEU 84 79 79 LEU LEU A . n A 1 85 CYS 85 80 80 CYS CYS A . n A 1 86 VAL 86 81 81 VAL VAL A . n A 1 87 PHE 87 82 82 PHE PHE A . n A 1 88 ALA 88 83 83 ALA ALA A . n A 1 89 ILE 89 84 84 ILE ILE A . n A 1 90 ASN 90 85 85 ASN ASN A . n A 1 91 ASN 91 86 86 ASN ASN A . n A 1 92 THR 92 87 87 THR THR A . n A 1 93 LYS 93 88 88 LYS LYS A . n A 1 94 SER 94 89 89 SER SER A . n A 1 95 PHE 95 90 90 PHE PHE A . n A 1 96 GLU 96 91 91 GLU GLU A . n A 1 97 ASP 97 92 92 ASP ASP A . n A 1 98 ILE 98 93 93 ILE ILE A . n A 1 99 HIS 99 94 94 HIS HIS A . n A 1 100 HIS 100 95 95 HIS HIS A . n A 1 101 TYR 101 96 96 TYR TYR A . n A 1 102 ARG 102 97 97 ARG ARG A . n A 1 103 GLU 103 98 98 GLU GLU A . n A 1 104 GLN 104 99 99 GLN GLN A . n A 1 105 ILE 105 100 100 ILE ILE A . n A 1 106 LYS 106 101 101 LYS LYS A . n A 1 107 ARG 107 102 102 ARG ARG A . n A 1 108 VAL 108 103 103 VAL VAL A . n A 1 109 LYS 109 104 104 LYS LYS A . n A 1 110 ASP 110 105 105 ASP ASP A . n A 1 111 SER 111 106 106 SER SER A . n A 1 112 GLU 112 107 107 GLU GLU A . n A 1 113 ASP 113 108 108 ASP ASP A . n A 1 114 VAL 114 109 109 VAL VAL A . n A 1 115 PRO 115 110 110 PRO PRO A . n A 1 116 MET 116 111 111 MET MET A . n A 1 117 VAL 117 112 112 VAL VAL A . n A 1 118 LEU 118 113 113 LEU LEU A . n A 1 119 VAL 119 114 114 VAL VAL A . n A 1 120 GLY 120 115 115 GLY GLY A . n A 1 121 ASN 121 116 116 ASN ASN A . n A 1 122 LYS 122 117 117 LYS LYS A . n A 1 123 CYS 123 118 118 CYS CYS A . n A 1 124 ASP 124 119 119 ASP ASP A . n A 1 125 LEU 125 120 120 LEU LEU A . n A 1 126 PRO 126 121 121 PRO PRO A . n A 1 127 SER 127 122 122 SER SER A . n A 1 128 ARG 128 123 123 ARG ARG A . n A 1 129 THR 129 124 124 THR THR A . n A 1 130 VAL 130 125 125 VAL VAL A . n A 1 131 ASP 131 126 126 ASP ASP A . n A 1 132 THR 132 127 127 THR THR A . n A 1 133 LYS 133 128 128 LYS LYS A . n A 1 134 GLN 134 129 129 GLN GLN A . n A 1 135 ALA 135 130 130 ALA ALA A . n A 1 136 GLN 136 131 131 GLN GLN A . n A 1 137 ASP 137 132 132 ASP ASP A . n A 1 138 LEU 138 133 133 LEU LEU A . n A 1 139 ALA 139 134 134 ALA ALA A . n A 1 140 ARG 140 135 135 ARG ARG A . n A 1 141 SER 141 136 136 SER SER A . n A 1 142 TYR 142 137 137 TYR TYR A . n A 1 143 GLY 143 138 138 GLY GLY A . n A 1 144 ILE 144 139 139 ILE ILE A . n A 1 145 PRO 145 140 140 PRO PRO A . n A 1 146 PHE 146 141 141 PHE PHE A . n A 1 147 ILE 147 142 142 ILE ILE A . n A 1 148 GLU 148 143 143 GLU GLU A . n A 1 149 THR 149 144 144 THR THR A . n A 1 150 SER 150 145 145 SER SER A . n A 1 151 ALA 151 146 146 ALA ALA A . n A 1 152 LYS 152 147 147 LYS LYS A . n A 1 153 THR 153 148 148 THR THR A . n A 1 154 ARG 154 149 149 ARG ARG A . n A 1 155 GLN 155 150 150 GLN GLN A . n A 1 156 GLY 156 151 151 GLY GLY A . n A 1 157 VAL 157 152 152 VAL VAL A . n A 1 158 ASP 158 153 153 ASP ASP A . n A 1 159 ASP 159 154 154 ASP ASP A . n A 1 160 ALA 160 155 155 ALA ALA A . n A 1 161 PHE 161 156 156 PHE PHE A . n A 1 162 TYR 162 157 157 TYR TYR A . n A 1 163 THR 163 158 158 THR THR A . n A 1 164 LEU 164 159 159 LEU LEU A . n A 1 165 VAL 165 160 160 VAL VAL A . n A 1 166 ARG 166 161 161 ARG ARG A . n A 1 167 GLU 167 162 162 GLU GLU A . n A 1 168 ILE 168 163 163 ILE ILE A . n A 1 169 ARG 169 164 164 ARG ARG A . n A 1 170 LYS 170 165 165 LYS LYS A . n A 1 171 HIS 171 166 166 HIS HIS A . n A 1 172 LYS 172 167 167 LYS LYS A . n A 1 173 GLU 173 168 168 GLU GLU A . n A 1 174 LYS 174 169 169 LYS LYS A . n A 1 175 MET 175 170 ? ? ? A . n A 1 176 SER 176 171 ? ? ? A . n A 1 177 LYS 177 172 ? ? ? A . n A 1 178 ASP 178 173 ? ? ? A . n A 1 179 GLY 179 174 ? ? ? A . n B 2 1 MAA 1 1 1 MAA MAA I . n B 2 2 ILE 2 2 2 ILE ILE I . n B 2 3 SAR 3 3 3 SAR SAR I . n B 2 4 SAR 4 4 4 SAR SAR I . n B 2 5 7T2 5 5 5 7T2 7T2 I . n B 2 6 SAR 6 6 6 SAR SAR I . n B 2 7 IAE 7 7 7 IAE IAE I . n B 2 8 LEU 8 8 8 LEU LEU I . n B 2 9 MEA 9 9 9 MEA MEA I . n B 2 10 MLE 10 10 10 MLE MLE I . n B 2 11 7TK 11 11 11 7TK 7TK I . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email torizawatky@chugai-pharm.co.jp _pdbx_contact_author.name_first Takuya _pdbx_contact_author.name_last Torizawa _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7537-6123 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GDP 1 201 201 GDP GDP A . D 4 MG 1 202 202 MG MG A . E 5 SO4 1 203 203 SO4 SO4 A . F 5 SO4 1 204 204 SO4 SO4 A . G 5 SO4 1 205 205 SO4 SO4 A . H 6 HOH 1 301 301 HOH HOH A . H 6 HOH 2 302 302 HOH HOH A . H 6 HOH 3 303 303 HOH HOH A . H 6 HOH 4 304 304 HOH HOH A . H 6 HOH 5 305 305 HOH HOH A . H 6 HOH 6 306 306 HOH HOH A . H 6 HOH 7 307 307 HOH HOH A . H 6 HOH 8 308 308 HOH HOH A . H 6 HOH 9 309 309 HOH HOH A . H 6 HOH 10 310 310 HOH HOH A . H 6 HOH 11 311 311 HOH HOH A . H 6 HOH 12 312 312 HOH HOH A . H 6 HOH 13 313 313 HOH HOH A . H 6 HOH 14 314 314 HOH HOH A . H 6 HOH 15 315 315 HOH HOH A . H 6 HOH 16 316 316 HOH HOH A . H 6 HOH 17 317 317 HOH HOH A . H 6 HOH 18 318 318 HOH HOH A . H 6 HOH 19 319 319 HOH HOH A . H 6 HOH 20 320 320 HOH HOH A . H 6 HOH 21 321 321 HOH HOH A . H 6 HOH 22 322 322 HOH HOH A . H 6 HOH 23 323 323 HOH HOH A . H 6 HOH 24 324 324 HOH HOH A . H 6 HOH 25 325 325 HOH HOH A . H 6 HOH 26 326 326 HOH HOH A . H 6 HOH 27 327 327 HOH HOH A . H 6 HOH 28 328 328 HOH HOH A . H 6 HOH 29 329 329 HOH HOH A . H 6 HOH 30 330 330 HOH HOH A . H 6 HOH 31 331 331 HOH HOH A . H 6 HOH 32 332 332 HOH HOH A . H 6 HOH 33 333 333 HOH HOH A . H 6 HOH 34 334 334 HOH HOH A . H 6 HOH 35 335 335 HOH HOH A . H 6 HOH 36 336 336 HOH HOH A . H 6 HOH 37 337 337 HOH HOH A . H 6 HOH 38 338 338 HOH HOH A . H 6 HOH 39 339 339 HOH HOH A . H 6 HOH 40 340 340 HOH HOH A . H 6 HOH 41 341 341 HOH HOH A . H 6 HOH 42 342 342 HOH HOH A . H 6 HOH 43 343 343 HOH HOH A . H 6 HOH 44 344 344 HOH HOH A . H 6 HOH 45 345 345 HOH HOH A . H 6 HOH 46 346 346 HOH HOH A . H 6 HOH 47 347 347 HOH HOH A . H 6 HOH 48 348 348 HOH HOH A . H 6 HOH 49 349 349 HOH HOH A . H 6 HOH 50 350 350 HOH HOH A . H 6 HOH 51 351 351 HOH HOH A . H 6 HOH 52 352 352 HOH HOH A . H 6 HOH 53 353 353 HOH HOH A . H 6 HOH 54 354 354 HOH HOH A . H 6 HOH 55 355 355 HOH HOH A . H 6 HOH 56 356 356 HOH HOH A . H 6 HOH 57 357 357 HOH HOH A . H 6 HOH 58 358 358 HOH HOH A . H 6 HOH 59 359 359 HOH HOH A . H 6 HOH 60 360 360 HOH HOH A . H 6 HOH 61 361 361 HOH HOH A . H 6 HOH 62 362 362 HOH HOH A . H 6 HOH 63 363 363 HOH HOH A . H 6 HOH 64 364 364 HOH HOH A . H 6 HOH 65 365 365 HOH HOH A . H 6 HOH 66 366 366 HOH HOH A . H 6 HOH 67 367 367 HOH HOH A . H 6 HOH 68 368 368 HOH HOH A . H 6 HOH 69 369 369 HOH HOH A . H 6 HOH 70 370 370 HOH HOH A . H 6 HOH 71 371 371 HOH HOH A . H 6 HOH 72 372 372 HOH HOH A . H 6 HOH 73 373 373 HOH HOH A . H 6 HOH 74 374 374 HOH HOH A . H 6 HOH 75 375 375 HOH HOH A . H 6 HOH 76 376 376 HOH HOH A . H 6 HOH 77 377 377 HOH HOH A . H 6 HOH 78 378 378 HOH HOH A . H 6 HOH 79 379 379 HOH HOH A . H 6 HOH 80 380 380 HOH HOH A . H 6 HOH 81 381 381 HOH HOH A . H 6 HOH 82 382 382 HOH HOH A . H 6 HOH 83 383 383 HOH HOH A . H 6 HOH 84 384 384 HOH HOH A . H 6 HOH 85 385 385 HOH HOH A . H 6 HOH 86 386 386 HOH HOH A . H 6 HOH 87 387 387 HOH HOH A . H 6 HOH 88 388 388 HOH HOH A . H 6 HOH 89 389 389 HOH HOH A . H 6 HOH 90 390 390 HOH HOH A . H 6 HOH 91 391 391 HOH HOH A . H 6 HOH 92 392 392 HOH HOH A . H 6 HOH 93 393 393 HOH HOH A . H 6 HOH 94 394 394 HOH HOH A . H 6 HOH 95 395 395 HOH HOH A . H 6 HOH 96 396 396 HOH HOH A . H 6 HOH 97 397 397 HOH HOH A . H 6 HOH 98 398 398 HOH HOH A . H 6 HOH 99 399 399 HOH HOH A . H 6 HOH 100 400 400 HOH HOH A . H 6 HOH 101 401 401 HOH HOH A . H 6 HOH 102 402 402 HOH HOH A . H 6 HOH 103 403 403 HOH HOH A . H 6 HOH 104 404 404 HOH HOH A . H 6 HOH 105 405 405 HOH HOH A . H 6 HOH 106 406 406 HOH HOH A . H 6 HOH 107 407 407 HOH HOH A . H 6 HOH 108 408 408 HOH HOH A . H 6 HOH 109 409 409 HOH HOH A . H 6 HOH 110 410 410 HOH HOH A . H 6 HOH 111 411 411 HOH HOH A . H 6 HOH 112 412 412 HOH HOH A . H 6 HOH 113 413 413 HOH HOH A . H 6 HOH 114 414 414 HOH HOH A . H 6 HOH 115 415 415 HOH HOH A . H 6 HOH 116 416 416 HOH HOH A . H 6 HOH 117 417 417 HOH HOH A . H 6 HOH 118 418 418 HOH HOH A . H 6 HOH 119 419 419 HOH HOH A . I 6 HOH 1 101 101 HOH HOH I . I 6 HOH 2 102 102 HOH HOH I . I 6 HOH 3 103 103 HOH HOH I . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2780 ? 1 MORE -68 ? 1 'SSA (A^2)' 8590 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O3B ? C GDP . ? A GDP 201 ? 1_555 90.4 ? 2 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 176.0 ? 3 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 89.7 ? 4 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 313 ? 1_555 83.7 ? 5 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 313 ? 1_555 95.7 ? 6 O ? H HOH . ? A HOH 311 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 313 ? 1_555 92.3 ? 7 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 336 ? 1_555 91.2 ? 8 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 336 ? 1_555 87.4 ? 9 O ? H HOH . ? A HOH 311 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 336 ? 1_555 92.8 ? 10 O ? H HOH . ? A HOH 313 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 336 ? 1_555 174.0 ? 11 OG ? A SER 22 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 342 ? 1_555 93.1 ? 12 O3B ? C GDP . ? A GDP 201 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 342 ? 1_555 170.6 ? 13 O ? H HOH . ? A HOH 311 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 342 ? 1_555 87.5 ? 14 O ? H HOH . ? A HOH 313 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 342 ? 1_555 93.4 ? 15 O ? H HOH . ? A HOH 336 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 342 ? 1_555 83.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-26 2 'Structure model' 1 1 2023-08-02 3 'Structure model' 1 2 2023-08-16 4 'Structure model' 1 3 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' citation 6 3 'Structure model' citation_author 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 2 'Structure model' '_citation_author.identifier_ORCID' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 3 'Structure model' '_citation_author.identifier_ORCID' 8 4 'Structure model' '_chem_comp_atom.atom_id' 9 4 'Structure model' '_chem_comp_bond.atom_id_1' 10 4 'Structure model' '_chem_comp_bond.atom_id_2' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? 1.1.7 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'Jan 31, 2020' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.7 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? pointless ? ? ? 1.12.12 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? 2.3.63 5 ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.8 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 7 # _pdbx_entry_details.entry_id 8JJS _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 33 ? ? -39.67 113.69 2 1 LYS A 117 ? ? 74.20 33.38 3 1 ARG A 149 ? ? 85.21 -4.25 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 168 ? CG ? A GLU 173 CG 2 1 Y 1 A GLU 168 ? CD ? A GLU 173 CD 3 1 Y 1 A GLU 168 ? OE1 ? A GLU 173 OE1 4 1 Y 1 A GLU 168 ? OE2 ? A GLU 173 OE2 5 1 Y 1 A LYS 169 ? CG ? A LYS 174 CG 6 1 Y 1 A LYS 169 ? CD ? A LYS 174 CD 7 1 Y 1 A LYS 169 ? CE ? A LYS 174 CE 8 1 Y 1 A LYS 169 ? NZ ? A LYS 174 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A SER -3 ? A SER 2 3 1 Y 1 A SER -2 ? A SER 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A GLY 0 ? A GLY 5 6 1 Y 1 A MET 170 ? A MET 175 7 1 Y 1 A SER 171 ? A SER 176 8 1 Y 1 A LYS 172 ? A LYS 177 9 1 Y 1 A ASP 173 ? A ASP 178 10 1 Y 1 A GLY 174 ? A GLY 179 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 7T2 N N N N 1 7T2 C C N N 2 7T2 O O N N 3 7T2 CA C N S 4 7T2 CB C N N 5 7T2 CG C Y N 6 7T2 CD1 C Y N 7 7T2 CD2 C Y N 8 7T2 CE1 C Y N 9 7T2 CE2 C Y N 10 7T2 CZ C Y N 11 7T2 CM C N N 12 7T2 CL CL N N 13 7T2 H H N N 14 7T2 OXT O N N 15 7T2 HA H N N 16 7T2 H5 H N N 17 7T2 H6 H N N 18 7T2 H7 H N N 19 7T2 H8 H N N 20 7T2 H9 H N N 21 7T2 H10 H N N 22 7T2 H11 H N N 23 7T2 H12 H N N 24 7T2 H13 H N N 25 7T2 HXT H N N 26 7TK N N N N 27 7TK CA C N S 28 7TK C C N N 29 7TK O O N N 30 7TK CB C N N 31 7TK CG C N N 32 7TK OD1 O N N 33 7TK N5 N N N 34 7TK C4 C N N 35 7TK C3 C N N 36 7TK C2 C N N 37 7TK C1 C N N 38 7TK O1 O N N 39 7TK H1 H N N 40 7TK H2 H N N 41 7TK H4 H N N 42 7TK H5 H N N 43 7TK H6 H N N 44 7TK H7 H N N 45 7TK H8 H N N 46 7TK H9 H N N 47 7TK H10 H N N 48 7TK H11 H N N 49 7TK H12 H N N 50 7TK H13 H N N 51 7TK H14 H N N 52 7TK H15 H N N 53 ALA N N N N 54 ALA CA C N S 55 ALA C C N N 56 ALA O O N N 57 ALA CB C N N 58 ALA OXT O N N 59 ALA H H N N 60 ALA H2 H N N 61 ALA HA H N N 62 ALA HB1 H N N 63 ALA HB2 H N N 64 ALA HB3 H N N 65 ALA HXT H N N 66 ARG N N N N 67 ARG CA C N S 68 ARG C C N N 69 ARG O O N N 70 ARG CB C N N 71 ARG CG C N N 72 ARG CD C N N 73 ARG NE N N N 74 ARG CZ C N N 75 ARG NH1 N N N 76 ARG NH2 N N N 77 ARG OXT O N N 78 ARG H H N N 79 ARG H2 H N N 80 ARG HA H N N 81 ARG HB2 H N N 82 ARG HB3 H N N 83 ARG HG2 H N N 84 ARG HG3 H N N 85 ARG HD2 H N N 86 ARG HD3 H N N 87 ARG HE H N N 88 ARG HH11 H N N 89 ARG HH12 H N N 90 ARG HH21 H N N 91 ARG HH22 H N N 92 ARG HXT H N N 93 ASN N N N N 94 ASN CA C N S 95 ASN C C N N 96 ASN O O N N 97 ASN CB C N N 98 ASN CG C N N 99 ASN OD1 O N N 100 ASN ND2 N N N 101 ASN OXT O N N 102 ASN H H N N 103 ASN H2 H N N 104 ASN HA H N N 105 ASN HB2 H N N 106 ASN HB3 H N N 107 ASN HD21 H N N 108 ASN HD22 H N N 109 ASN HXT H N N 110 ASP N N N N 111 ASP CA C N S 112 ASP C C N N 113 ASP O O N N 114 ASP CB C N N 115 ASP CG C N N 116 ASP OD1 O N N 117 ASP OD2 O N N 118 ASP OXT O N N 119 ASP H H N N 120 ASP H2 H N N 121 ASP HA H N N 122 ASP HB2 H N N 123 ASP HB3 H N N 124 ASP HD2 H N N 125 ASP HXT H N N 126 CYS N N N N 127 CYS CA C N R 128 CYS C C N N 129 CYS O O N N 130 CYS CB C N N 131 CYS SG S N N 132 CYS OXT O N N 133 CYS H H N N 134 CYS H2 H N N 135 CYS HA H N N 136 CYS HB2 H N N 137 CYS HB3 H N N 138 CYS HG H N N 139 CYS HXT H N N 140 GDP PB P N N 141 GDP O1B O N N 142 GDP O2B O N N 143 GDP O3B O N N 144 GDP O3A O N N 145 GDP PA P N N 146 GDP O1A O N N 147 GDP O2A O N N 148 GDP "O5'" O N N 149 GDP "C5'" C N N 150 GDP "C4'" C N R 151 GDP "O4'" O N N 152 GDP "C3'" C N S 153 GDP "O3'" O N N 154 GDP "C2'" C N R 155 GDP "O2'" O N N 156 GDP "C1'" C N R 157 GDP N9 N Y N 158 GDP C8 C Y N 159 GDP N7 N Y N 160 GDP C5 C Y N 161 GDP C6 C N N 162 GDP O6 O N N 163 GDP N1 N N N 164 GDP C2 C N N 165 GDP N2 N N N 166 GDP N3 N N N 167 GDP C4 C Y N 168 GDP HOB2 H N N 169 GDP HOB3 H N N 170 GDP HOA2 H N N 171 GDP "H5'" H N N 172 GDP "H5''" H N N 173 GDP "H4'" H N N 174 GDP "H3'" H N N 175 GDP "HO3'" H N N 176 GDP "H2'" H N N 177 GDP "HO2'" H N N 178 GDP "H1'" H N N 179 GDP H8 H N N 180 GDP HN1 H N N 181 GDP HN21 H N N 182 GDP HN22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 IAE N N N N 257 IAE C C N N 258 IAE O O N N 259 IAE CA C N S 260 IAE CB C N N 261 IAE CG C N N 262 IAE CD C Y N 263 IAE CE1 C Y N 264 IAE CE2 C Y N 265 IAE CZ1 C Y N 266 IAE CZ2 C Y N 267 IAE CH C Y N 268 IAE CI C N N 269 IAE FI1 F N N 270 IAE FI2 F N N 271 IAE FI3 F N N 272 IAE OXT O N N 273 IAE H2 H N N 274 IAE H H N N 275 IAE HA H N N 276 IAE HB1 H N N 277 IAE HB2 H N N 278 IAE HG1 H N N 279 IAE HG2 H N N 280 IAE H9 H N N 281 IAE H10 H N N 282 IAE H11 H N N 283 IAE H12 H N N 284 IAE HXT H N N 285 ILE N N N N 286 ILE CA C N S 287 ILE C C N N 288 ILE O O N N 289 ILE CB C N S 290 ILE CG1 C N N 291 ILE CG2 C N N 292 ILE CD1 C N N 293 ILE OXT O N N 294 ILE H H N N 295 ILE H2 H N N 296 ILE HA H N N 297 ILE HB H N N 298 ILE HG12 H N N 299 ILE HG13 H N N 300 ILE HG21 H N N 301 ILE HG22 H N N 302 ILE HG23 H N N 303 ILE HD11 H N N 304 ILE HD12 H N N 305 ILE HD13 H N N 306 ILE HXT H N N 307 LEU N N N N 308 LEU CA C N S 309 LEU C C N N 310 LEU O O N N 311 LEU CB C N N 312 LEU CG C N N 313 LEU CD1 C N N 314 LEU CD2 C N N 315 LEU OXT O N N 316 LEU H H N N 317 LEU H2 H N N 318 LEU HA H N N 319 LEU HB2 H N N 320 LEU HB3 H N N 321 LEU HG H N N 322 LEU HD11 H N N 323 LEU HD12 H N N 324 LEU HD13 H N N 325 LEU HD21 H N N 326 LEU HD22 H N N 327 LEU HD23 H N N 328 LEU HXT H N N 329 LYS N N N N 330 LYS CA C N S 331 LYS C C N N 332 LYS O O N N 333 LYS CB C N N 334 LYS CG C N N 335 LYS CD C N N 336 LYS CE C N N 337 LYS NZ N N N 338 LYS OXT O N N 339 LYS H H N N 340 LYS H2 H N N 341 LYS HA H N N 342 LYS HB2 H N N 343 LYS HB3 H N N 344 LYS HG2 H N N 345 LYS HG3 H N N 346 LYS HD2 H N N 347 LYS HD3 H N N 348 LYS HE2 H N N 349 LYS HE3 H N N 350 LYS HZ1 H N N 351 LYS HZ2 H N N 352 LYS HZ3 H N N 353 LYS HXT H N N 354 MAA N N N N 355 MAA CM C N N 356 MAA CA C N S 357 MAA CB C N N 358 MAA C C N N 359 MAA O O N N 360 MAA OXT O N N 361 MAA H H N N 362 MAA HM1 H N N 363 MAA HM2 H N N 364 MAA HM3 H N N 365 MAA HA H N N 366 MAA HB1 H N N 367 MAA HB2 H N N 368 MAA HB3 H N N 369 MAA HXT H N N 370 MEA C1 C N N 371 MEA N N N N 372 MEA CA C N S 373 MEA C C N N 374 MEA O O N N 375 MEA CB C N N 376 MEA CG C Y N 377 MEA CD1 C Y N 378 MEA CE1 C Y N 379 MEA CZ C Y N 380 MEA CE2 C Y N 381 MEA CD2 C Y N 382 MEA OXT O N N 383 MEA HC1 H N N 384 MEA HC2 H N N 385 MEA HC3 H N N 386 MEA H H N N 387 MEA HA H N N 388 MEA HB1 H N N 389 MEA HB2 H N N 390 MEA HD1 H N N 391 MEA HE1 H N N 392 MEA HZ H N N 393 MEA HE2 H N N 394 MEA HD2 H N N 395 MEA HXT H N N 396 MET N N N N 397 MET CA C N S 398 MET C C N N 399 MET O O N N 400 MET CB C N N 401 MET CG C N N 402 MET SD S N N 403 MET CE C N N 404 MET OXT O N N 405 MET H H N N 406 MET H2 H N N 407 MET HA H N N 408 MET HB2 H N N 409 MET HB3 H N N 410 MET HG2 H N N 411 MET HG3 H N N 412 MET HE1 H N N 413 MET HE2 H N N 414 MET HE3 H N N 415 MET HXT H N N 416 MG MG MG N N 417 MLE N N N N 418 MLE CN C N N 419 MLE CA C N S 420 MLE CB C N N 421 MLE CG C N N 422 MLE CD1 C N N 423 MLE CD2 C N N 424 MLE C C N N 425 MLE O O N N 426 MLE OXT O N N 427 MLE H H N N 428 MLE HN1 H N N 429 MLE HN2 H N N 430 MLE HN3 H N N 431 MLE HA H N N 432 MLE HB2 H N N 433 MLE HB3 H N N 434 MLE HG H N N 435 MLE HD11 H N N 436 MLE HD12 H N N 437 MLE HD13 H N N 438 MLE HD21 H N N 439 MLE HD22 H N N 440 MLE HD23 H N N 441 MLE HXT H N N 442 PHE N N N N 443 PHE CA C N S 444 PHE C C N N 445 PHE O O N N 446 PHE CB C N N 447 PHE CG C Y N 448 PHE CD1 C Y N 449 PHE CD2 C Y N 450 PHE CE1 C Y N 451 PHE CE2 C Y N 452 PHE CZ C Y N 453 PHE OXT O N N 454 PHE H H N N 455 PHE H2 H N N 456 PHE HA H N N 457 PHE HB2 H N N 458 PHE HB3 H N N 459 PHE HD1 H N N 460 PHE HD2 H N N 461 PHE HE1 H N N 462 PHE HE2 H N N 463 PHE HZ H N N 464 PHE HXT H N N 465 PRO N N N N 466 PRO CA C N S 467 PRO C C N N 468 PRO O O N N 469 PRO CB C N N 470 PRO CG C N N 471 PRO CD C N N 472 PRO OXT O N N 473 PRO H H N N 474 PRO HA H N N 475 PRO HB2 H N N 476 PRO HB3 H N N 477 PRO HG2 H N N 478 PRO HG3 H N N 479 PRO HD2 H N N 480 PRO HD3 H N N 481 PRO HXT H N N 482 SAR N N N N 483 SAR CA C N N 484 SAR C C N N 485 SAR O O N N 486 SAR CN C N N 487 SAR OXT O N N 488 SAR H H N N 489 SAR HA2 H N N 490 SAR HA3 H N N 491 SAR HN1 H N N 492 SAR HN2 H N N 493 SAR HN3 H N N 494 SAR HXT H N N 495 SER N N N N 496 SER CA C N S 497 SER C C N N 498 SER O O N N 499 SER CB C N N 500 SER OG O N N 501 SER OXT O N N 502 SER H H N N 503 SER H2 H N N 504 SER HA H N N 505 SER HB2 H N N 506 SER HB3 H N N 507 SER HG H N N 508 SER HXT H N N 509 SO4 S S N N 510 SO4 O1 O N N 511 SO4 O2 O N N 512 SO4 O3 O N N 513 SO4 O4 O N N 514 THR N N N N 515 THR CA C N S 516 THR C C N N 517 THR O O N N 518 THR CB C N R 519 THR OG1 O N N 520 THR CG2 C N N 521 THR OXT O N N 522 THR H H N N 523 THR H2 H N N 524 THR HA H N N 525 THR HB H N N 526 THR HG1 H N N 527 THR HG21 H N N 528 THR HG22 H N N 529 THR HG23 H N N 530 THR HXT H N N 531 TYR N N N N 532 TYR CA C N S 533 TYR C C N N 534 TYR O O N N 535 TYR CB C N N 536 TYR CG C Y N 537 TYR CD1 C Y N 538 TYR CD2 C Y N 539 TYR CE1 C Y N 540 TYR CE2 C Y N 541 TYR CZ C Y N 542 TYR OH O N N 543 TYR OXT O N N 544 TYR H H N N 545 TYR H2 H N N 546 TYR HA H N N 547 TYR HB2 H N N 548 TYR HB3 H N N 549 TYR HD1 H N N 550 TYR HD2 H N N 551 TYR HE1 H N N 552 TYR HE2 H N N 553 TYR HH H N N 554 TYR HXT H N N 555 VAL N N N N 556 VAL CA C N S 557 VAL C C N N 558 VAL O O N N 559 VAL CB C N N 560 VAL CG1 C N N 561 VAL CG2 C N N 562 VAL OXT O N N 563 VAL H H N N 564 VAL H2 H N N 565 VAL HA H N N 566 VAL HB H N N 567 VAL HG11 H N N 568 VAL HG12 H N N 569 VAL HG13 H N N 570 VAL HG21 H N N 571 VAL HG22 H N N 572 VAL HG23 H N N 573 VAL HXT H N N 574 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7T2 CM N sing N N 1 7T2 CL CZ sing N N 2 7T2 N CA sing N N 3 7T2 CE1 CZ doub Y N 4 7T2 CE1 CD1 sing Y N 5 7T2 CZ CE2 sing Y N 6 7T2 CD1 CG doub Y N 7 7T2 CE2 CD2 doub Y N 8 7T2 CG CD2 sing Y N 9 7T2 CG CB sing N N 10 7T2 CA CB sing N N 11 7T2 CA C sing N N 12 7T2 O C doub N N 13 7T2 N H sing N N 14 7T2 C OXT sing N N 15 7T2 CA HA sing N N 16 7T2 CB H5 sing N N 17 7T2 CB H6 sing N N 18 7T2 CD1 H7 sing N N 19 7T2 CD2 H8 sing N N 20 7T2 CE1 H9 sing N N 21 7T2 CE2 H10 sing N N 22 7T2 CM H11 sing N N 23 7T2 CM H12 sing N N 24 7T2 CM H13 sing N N 25 7T2 OXT HXT sing N N 26 7TK CG OD1 doub N N 27 7TK CG CB sing N N 28 7TK CB CA sing N N 29 7TK CA C sing N N 30 7TK CA N sing N N 31 7TK C O doub N N 32 7TK C N5 sing N N 33 7TK C1 N5 sing N N 34 7TK C1 C2 sing N N 35 7TK N5 C4 sing N N 36 7TK C2 C3 sing N N 37 7TK C4 C3 sing N N 38 7TK CG O1 sing N N 39 7TK N H1 sing N N 40 7TK N H2 sing N N 41 7TK CA H4 sing N N 42 7TK CB H5 sing N N 43 7TK CB H6 sing N N 44 7TK C4 H7 sing N N 45 7TK C4 H8 sing N N 46 7TK C3 H9 sing N N 47 7TK C3 H10 sing N N 48 7TK C2 H11 sing N N 49 7TK C2 H12 sing N N 50 7TK C1 H13 sing N N 51 7TK C1 H14 sing N N 52 7TK O1 H15 sing N N 53 ALA N CA sing N N 54 ALA N H sing N N 55 ALA N H2 sing N N 56 ALA CA C sing N N 57 ALA CA CB sing N N 58 ALA CA HA sing N N 59 ALA C O doub N N 60 ALA C OXT sing N N 61 ALA CB HB1 sing N N 62 ALA CB HB2 sing N N 63 ALA CB HB3 sing N N 64 ALA OXT HXT sing N N 65 ARG N CA sing N N 66 ARG N H sing N N 67 ARG N H2 sing N N 68 ARG CA C sing N N 69 ARG CA CB sing N N 70 ARG CA HA sing N N 71 ARG C O doub N N 72 ARG C OXT sing N N 73 ARG CB CG sing N N 74 ARG CB HB2 sing N N 75 ARG CB HB3 sing N N 76 ARG CG CD sing N N 77 ARG CG HG2 sing N N 78 ARG CG HG3 sing N N 79 ARG CD NE sing N N 80 ARG CD HD2 sing N N 81 ARG CD HD3 sing N N 82 ARG NE CZ sing N N 83 ARG NE HE sing N N 84 ARG CZ NH1 sing N N 85 ARG CZ NH2 doub N N 86 ARG NH1 HH11 sing N N 87 ARG NH1 HH12 sing N N 88 ARG NH2 HH21 sing N N 89 ARG NH2 HH22 sing N N 90 ARG OXT HXT sing N N 91 ASN N CA sing N N 92 ASN N H sing N N 93 ASN N H2 sing N N 94 ASN CA C sing N N 95 ASN CA CB sing N N 96 ASN CA HA sing N N 97 ASN C O doub N N 98 ASN C OXT sing N N 99 ASN CB CG sing N N 100 ASN CB HB2 sing N N 101 ASN CB HB3 sing N N 102 ASN CG OD1 doub N N 103 ASN CG ND2 sing N N 104 ASN ND2 HD21 sing N N 105 ASN ND2 HD22 sing N N 106 ASN OXT HXT sing N N 107 ASP N CA sing N N 108 ASP N H sing N N 109 ASP N H2 sing N N 110 ASP CA C sing N N 111 ASP CA CB sing N N 112 ASP CA HA sing N N 113 ASP C O doub N N 114 ASP C OXT sing N N 115 ASP CB CG sing N N 116 ASP CB HB2 sing N N 117 ASP CB HB3 sing N N 118 ASP CG OD1 doub N N 119 ASP CG OD2 sing N N 120 ASP OD2 HD2 sing N N 121 ASP OXT HXT sing N N 122 CYS N CA sing N N 123 CYS N H sing N N 124 CYS N H2 sing N N 125 CYS CA C sing N N 126 CYS CA CB sing N N 127 CYS CA HA sing N N 128 CYS C O doub N N 129 CYS C OXT sing N N 130 CYS CB SG sing N N 131 CYS CB HB2 sing N N 132 CYS CB HB3 sing N N 133 CYS SG HG sing N N 134 CYS OXT HXT sing N N 135 GDP PB O1B doub N N 136 GDP PB O2B sing N N 137 GDP PB O3B sing N N 138 GDP PB O3A sing N N 139 GDP O2B HOB2 sing N N 140 GDP O3B HOB3 sing N N 141 GDP O3A PA sing N N 142 GDP PA O1A doub N N 143 GDP PA O2A sing N N 144 GDP PA "O5'" sing N N 145 GDP O2A HOA2 sing N N 146 GDP "O5'" "C5'" sing N N 147 GDP "C5'" "C4'" sing N N 148 GDP "C5'" "H5'" sing N N 149 GDP "C5'" "H5''" sing N N 150 GDP "C4'" "O4'" sing N N 151 GDP "C4'" "C3'" sing N N 152 GDP "C4'" "H4'" sing N N 153 GDP "O4'" "C1'" sing N N 154 GDP "C3'" "O3'" sing N N 155 GDP "C3'" "C2'" sing N N 156 GDP "C3'" "H3'" sing N N 157 GDP "O3'" "HO3'" sing N N 158 GDP "C2'" "O2'" sing N N 159 GDP "C2'" "C1'" sing N N 160 GDP "C2'" "H2'" sing N N 161 GDP "O2'" "HO2'" sing N N 162 GDP "C1'" N9 sing N N 163 GDP "C1'" "H1'" sing N N 164 GDP N9 C8 sing Y N 165 GDP N9 C4 sing Y N 166 GDP C8 N7 doub Y N 167 GDP C8 H8 sing N N 168 GDP N7 C5 sing Y N 169 GDP C5 C6 sing N N 170 GDP C5 C4 doub Y N 171 GDP C6 O6 doub N N 172 GDP C6 N1 sing N N 173 GDP N1 C2 sing N N 174 GDP N1 HN1 sing N N 175 GDP C2 N2 sing N N 176 GDP C2 N3 doub N N 177 GDP N2 HN21 sing N N 178 GDP N2 HN22 sing N N 179 GDP N3 C4 sing N N 180 GLN N CA sing N N 181 GLN N H sing N N 182 GLN N H2 sing N N 183 GLN CA C sing N N 184 GLN CA CB sing N N 185 GLN CA HA sing N N 186 GLN C O doub N N 187 GLN C OXT sing N N 188 GLN CB CG sing N N 189 GLN CB HB2 sing N N 190 GLN CB HB3 sing N N 191 GLN CG CD sing N N 192 GLN CG HG2 sing N N 193 GLN CG HG3 sing N N 194 GLN CD OE1 doub N N 195 GLN CD NE2 sing N N 196 GLN NE2 HE21 sing N N 197 GLN NE2 HE22 sing N N 198 GLN OXT HXT sing N N 199 GLU N CA sing N N 200 GLU N H sing N N 201 GLU N H2 sing N N 202 GLU CA C sing N N 203 GLU CA CB sing N N 204 GLU CA HA sing N N 205 GLU C O doub N N 206 GLU C OXT sing N N 207 GLU CB CG sing N N 208 GLU CB HB2 sing N N 209 GLU CB HB3 sing N N 210 GLU CG CD sing N N 211 GLU CG HG2 sing N N 212 GLU CG HG3 sing N N 213 GLU CD OE1 doub N N 214 GLU CD OE2 sing N N 215 GLU OE2 HE2 sing N N 216 GLU OXT HXT sing N N 217 GLY N CA sing N N 218 GLY N H sing N N 219 GLY N H2 sing N N 220 GLY CA C sing N N 221 GLY CA HA2 sing N N 222 GLY CA HA3 sing N N 223 GLY C O doub N N 224 GLY C OXT sing N N 225 GLY OXT HXT sing N N 226 HIS N CA sing N N 227 HIS N H sing N N 228 HIS N H2 sing N N 229 HIS CA C sing N N 230 HIS CA CB sing N N 231 HIS CA HA sing N N 232 HIS C O doub N N 233 HIS C OXT sing N N 234 HIS CB CG sing N N 235 HIS CB HB2 sing N N 236 HIS CB HB3 sing N N 237 HIS CG ND1 sing Y N 238 HIS CG CD2 doub Y N 239 HIS ND1 CE1 doub Y N 240 HIS ND1 HD1 sing N N 241 HIS CD2 NE2 sing Y N 242 HIS CD2 HD2 sing N N 243 HIS CE1 NE2 sing Y N 244 HIS CE1 HE1 sing N N 245 HIS NE2 HE2 sing N N 246 HIS OXT HXT sing N N 247 HOH O H1 sing N N 248 HOH O H2 sing N N 249 IAE O C doub N N 250 IAE N CA sing N N 251 IAE C CA sing N N 252 IAE CA CB sing N N 253 IAE CB CG sing N N 254 IAE CG CD sing N N 255 IAE CE2 CD doub Y N 256 IAE CE2 CZ2 sing Y N 257 IAE CD CE1 sing Y N 258 IAE CZ2 CH doub Y N 259 IAE CE1 CZ1 doub Y N 260 IAE CH CZ1 sing Y N 261 IAE CH CI sing N N 262 IAE FI2 CI sing N N 263 IAE FI1 CI sing N N 264 IAE CI FI3 sing N N 265 IAE C OXT sing N N 266 IAE N H2 sing N N 267 IAE N H sing N N 268 IAE CA HA sing N N 269 IAE CB HB1 sing N N 270 IAE CB HB2 sing N N 271 IAE CG HG1 sing N N 272 IAE CG HG2 sing N N 273 IAE CE1 H9 sing N N 274 IAE CE2 H10 sing N N 275 IAE CZ1 H11 sing N N 276 IAE CZ2 H12 sing N N 277 IAE OXT HXT sing N N 278 ILE N CA sing N N 279 ILE N H sing N N 280 ILE N H2 sing N N 281 ILE CA C sing N N 282 ILE CA CB sing N N 283 ILE CA HA sing N N 284 ILE C O doub N N 285 ILE C OXT sing N N 286 ILE CB CG1 sing N N 287 ILE CB CG2 sing N N 288 ILE CB HB sing N N 289 ILE CG1 CD1 sing N N 290 ILE CG1 HG12 sing N N 291 ILE CG1 HG13 sing N N 292 ILE CG2 HG21 sing N N 293 ILE CG2 HG22 sing N N 294 ILE CG2 HG23 sing N N 295 ILE CD1 HD11 sing N N 296 ILE CD1 HD12 sing N N 297 ILE CD1 HD13 sing N N 298 ILE OXT HXT sing N N 299 LEU N CA sing N N 300 LEU N H sing N N 301 LEU N H2 sing N N 302 LEU CA C sing N N 303 LEU CA CB sing N N 304 LEU CA HA sing N N 305 LEU C O doub N N 306 LEU C OXT sing N N 307 LEU CB CG sing N N 308 LEU CB HB2 sing N N 309 LEU CB HB3 sing N N 310 LEU CG CD1 sing N N 311 LEU CG CD2 sing N N 312 LEU CG HG sing N N 313 LEU CD1 HD11 sing N N 314 LEU CD1 HD12 sing N N 315 LEU CD1 HD13 sing N N 316 LEU CD2 HD21 sing N N 317 LEU CD2 HD22 sing N N 318 LEU CD2 HD23 sing N N 319 LEU OXT HXT sing N N 320 LYS N CA sing N N 321 LYS N H sing N N 322 LYS N H2 sing N N 323 LYS CA C sing N N 324 LYS CA CB sing N N 325 LYS CA HA sing N N 326 LYS C O doub N N 327 LYS C OXT sing N N 328 LYS CB CG sing N N 329 LYS CB HB2 sing N N 330 LYS CB HB3 sing N N 331 LYS CG CD sing N N 332 LYS CG HG2 sing N N 333 LYS CG HG3 sing N N 334 LYS CD CE sing N N 335 LYS CD HD2 sing N N 336 LYS CD HD3 sing N N 337 LYS CE NZ sing N N 338 LYS CE HE2 sing N N 339 LYS CE HE3 sing N N 340 LYS NZ HZ1 sing N N 341 LYS NZ HZ2 sing N N 342 LYS NZ HZ3 sing N N 343 LYS OXT HXT sing N N 344 MAA N CM sing N N 345 MAA N CA sing N N 346 MAA N H sing N N 347 MAA CM HM1 sing N N 348 MAA CM HM2 sing N N 349 MAA CM HM3 sing N N 350 MAA CA CB sing N N 351 MAA CA C sing N N 352 MAA CA HA sing N N 353 MAA CB HB1 sing N N 354 MAA CB HB2 sing N N 355 MAA CB HB3 sing N N 356 MAA C O doub N N 357 MAA C OXT sing N N 358 MAA OXT HXT sing N N 359 MEA C1 N sing N N 360 MEA C1 HC1 sing N N 361 MEA C1 HC2 sing N N 362 MEA C1 HC3 sing N N 363 MEA N CA sing N N 364 MEA N H sing N N 365 MEA CA C sing N N 366 MEA CA CB sing N N 367 MEA CA HA sing N N 368 MEA C O doub N N 369 MEA C OXT sing N N 370 MEA CB CG sing N N 371 MEA CB HB1 sing N N 372 MEA CB HB2 sing N N 373 MEA CG CD1 doub Y N 374 MEA CG CD2 sing Y N 375 MEA CD1 CE1 sing Y N 376 MEA CD1 HD1 sing N N 377 MEA CE1 CZ doub Y N 378 MEA CE1 HE1 sing N N 379 MEA CZ CE2 sing Y N 380 MEA CZ HZ sing N N 381 MEA CE2 CD2 doub Y N 382 MEA CE2 HE2 sing N N 383 MEA CD2 HD2 sing N N 384 MEA OXT HXT sing N N 385 MET N CA sing N N 386 MET N H sing N N 387 MET N H2 sing N N 388 MET CA C sing N N 389 MET CA CB sing N N 390 MET CA HA sing N N 391 MET C O doub N N 392 MET C OXT sing N N 393 MET CB CG sing N N 394 MET CB HB2 sing N N 395 MET CB HB3 sing N N 396 MET CG SD sing N N 397 MET CG HG2 sing N N 398 MET CG HG3 sing N N 399 MET SD CE sing N N 400 MET CE HE1 sing N N 401 MET CE HE2 sing N N 402 MET CE HE3 sing N N 403 MET OXT HXT sing N N 404 MLE N CN sing N N 405 MLE N CA sing N N 406 MLE N H sing N N 407 MLE CN HN1 sing N N 408 MLE CN HN2 sing N N 409 MLE CN HN3 sing N N 410 MLE CA CB sing N N 411 MLE CA C sing N N 412 MLE CA HA sing N N 413 MLE CB CG sing N N 414 MLE CB HB2 sing N N 415 MLE CB HB3 sing N N 416 MLE CG CD1 sing N N 417 MLE CG CD2 sing N N 418 MLE CG HG sing N N 419 MLE CD1 HD11 sing N N 420 MLE CD1 HD12 sing N N 421 MLE CD1 HD13 sing N N 422 MLE CD2 HD21 sing N N 423 MLE CD2 HD22 sing N N 424 MLE CD2 HD23 sing N N 425 MLE C O doub N N 426 MLE C OXT sing N N 427 MLE OXT HXT sing N N 428 PHE N CA sing N N 429 PHE N H sing N N 430 PHE N H2 sing N N 431 PHE CA C sing N N 432 PHE CA CB sing N N 433 PHE CA HA sing N N 434 PHE C O doub N N 435 PHE C OXT sing N N 436 PHE CB CG sing N N 437 PHE CB HB2 sing N N 438 PHE CB HB3 sing N N 439 PHE CG CD1 doub Y N 440 PHE CG CD2 sing Y N 441 PHE CD1 CE1 sing Y N 442 PHE CD1 HD1 sing N N 443 PHE CD2 CE2 doub Y N 444 PHE CD2 HD2 sing N N 445 PHE CE1 CZ doub Y N 446 PHE CE1 HE1 sing N N 447 PHE CE2 CZ sing Y N 448 PHE CE2 HE2 sing N N 449 PHE CZ HZ sing N N 450 PHE OXT HXT sing N N 451 PRO N CA sing N N 452 PRO N CD sing N N 453 PRO N H sing N N 454 PRO CA C sing N N 455 PRO CA CB sing N N 456 PRO CA HA sing N N 457 PRO C O doub N N 458 PRO C OXT sing N N 459 PRO CB CG sing N N 460 PRO CB HB2 sing N N 461 PRO CB HB3 sing N N 462 PRO CG CD sing N N 463 PRO CG HG2 sing N N 464 PRO CG HG3 sing N N 465 PRO CD HD2 sing N N 466 PRO CD HD3 sing N N 467 PRO OXT HXT sing N N 468 SAR N CA sing N N 469 SAR N CN sing N N 470 SAR N H sing N N 471 SAR CA C sing N N 472 SAR CA HA2 sing N N 473 SAR CA HA3 sing N N 474 SAR C O doub N N 475 SAR C OXT sing N N 476 SAR CN HN1 sing N N 477 SAR CN HN2 sing N N 478 SAR CN HN3 sing N N 479 SAR OXT HXT sing N N 480 SER N CA sing N N 481 SER N H sing N N 482 SER N H2 sing N N 483 SER CA C sing N N 484 SER CA CB sing N N 485 SER CA HA sing N N 486 SER C O doub N N 487 SER C OXT sing N N 488 SER CB OG sing N N 489 SER CB HB2 sing N N 490 SER CB HB3 sing N N 491 SER OG HG sing N N 492 SER OXT HXT sing N N 493 SO4 S O1 doub N N 494 SO4 S O2 doub N N 495 SO4 S O3 sing N N 496 SO4 S O4 sing N N 497 THR N CA sing N N 498 THR N H sing N N 499 THR N H2 sing N N 500 THR CA C sing N N 501 THR CA CB sing N N 502 THR CA HA sing N N 503 THR C O doub N N 504 THR C OXT sing N N 505 THR CB OG1 sing N N 506 THR CB CG2 sing N N 507 THR CB HB sing N N 508 THR OG1 HG1 sing N N 509 THR CG2 HG21 sing N N 510 THR CG2 HG22 sing N N 511 THR CG2 HG23 sing N N 512 THR OXT HXT sing N N 513 TYR N CA sing N N 514 TYR N H sing N N 515 TYR N H2 sing N N 516 TYR CA C sing N N 517 TYR CA CB sing N N 518 TYR CA HA sing N N 519 TYR C O doub N N 520 TYR C OXT sing N N 521 TYR CB CG sing N N 522 TYR CB HB2 sing N N 523 TYR CB HB3 sing N N 524 TYR CG CD1 doub Y N 525 TYR CG CD2 sing Y N 526 TYR CD1 CE1 sing Y N 527 TYR CD1 HD1 sing N N 528 TYR CD2 CE2 doub Y N 529 TYR CD2 HD2 sing N N 530 TYR CE1 CZ doub Y N 531 TYR CE1 HE1 sing N N 532 TYR CE2 CZ sing Y N 533 TYR CE2 HE2 sing N N 534 TYR CZ OH sing N N 535 TYR OH HH sing N N 536 TYR OXT HXT sing N N 537 VAL N CA sing N N 538 VAL N H sing N N 539 VAL N H2 sing N N 540 VAL CA C sing N N 541 VAL CA CB sing N N 542 VAL CA HA sing N N 543 VAL C O doub N N 544 VAL C OXT sing N N 545 VAL CB CG1 sing N N 546 VAL CB CG2 sing N N 547 VAL CB HB sing N N 548 VAL CG1 HG11 sing N N 549 VAL CG1 HG12 sing N N 550 VAL CG1 HG13 sing N N 551 VAL CG2 HG21 sing N N 552 VAL CG2 HG22 sing N N 553 VAL CG2 HG23 sing N N 554 VAL OXT HXT sing N N 555 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 7T2 ? ? 7T2 ? ? 'SUBJECT OF INVESTIGATION' ? 2 7TK ? ? 7TK ? ? 'SUBJECT OF INVESTIGATION' ? 3 IAE ? ? IAE ? ? 'SUBJECT OF INVESTIGATION' ? 4 MAA ? ? MAA ? ? 'SUBJECT OF INVESTIGATION' ? 5 MEA ? ? MEA ? ? 'SUBJECT OF INVESTIGATION' ? 6 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? 7 MLE ? ? MLE ? ? 'SUBJECT OF INVESTIGATION' ? 8 SAR ? ? SAR ? ? 'SUBJECT OF INVESTIGATION' ? 9 SO4 ? ? SO4 ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 'MAGNESIUM ION' MG 5 'SULFATE ION' SO4 6 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #