HEADER TRANSPORT PROTEIN 02-JUN-23 8JLF TITLE CRYO-EM STRUCTURE OF SV2A IN COMPLEX WITH BONT/A2 HC COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTIC VESICLE GLYCOPROTEIN 2A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BOTULINUM NEUROTOXIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SV2A; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM; SOURCE 10 ORGANISM_TAXID: 1491; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SYNAPTIC VESICLE, EPILEPSY, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.YAMAGATA REVDAT 2 08-MAY-24 8JLF 1 JRNL REVDAT 1 01-MAY-24 8JLF 0 JRNL AUTH A.YAMAGATA,K.ITO,T.SUZUKI,N.DOHMAE,T.TERADA,M.SHIROUZU JRNL TITL STRUCTURAL BASIS FOR ANTIEPILEPTIC DRUGS AND BOTULINUM JRNL TITL 2 NEUROTOXIN RECOGNITION OF SV2A. JRNL REF NAT COMMUN V. 15 3027 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38637505 JRNL DOI 10.1038/S41467-024-47322-4 REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, COOT, REFMAC, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.010 REMARK 3 NUMBER OF PARTICLES : 510137 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8JLF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1300038171. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : SV2A IN COMPLEX WITH BONT/A2 HC REMARK 245 DOMAIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 4890 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ASP A -6 REMARK 465 TYR A -5 REMARK 465 LYS A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 ASP A -1 REMARK 465 ASP A 0 REMARK 465 LYS A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 3 REMARK 465 GLY A 4 REMARK 465 PHE A 5 REMARK 465 ARG A 6 REMARK 465 ASP A 7 REMARK 465 ARG A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 PHE A 11 REMARK 465 ILE A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 ALA A 15 REMARK 465 LYS A 16 REMARK 465 ASP A 17 REMARK 465 ILE A 18 REMARK 465 ALA A 19 REMARK 465 LYS A 20 REMARK 465 GLU A 21 REMARK 465 VAL A 22 REMARK 465 LYS A 23 REMARK 465 LYS A 24 REMARK 465 HIS A 25 REMARK 465 ALA A 26 REMARK 465 ALA A 27 REMARK 465 LYS A 28 REMARK 465 LYS A 29 REMARK 465 VAL A 30 REMARK 465 VAL A 31 REMARK 465 LYS A 32 REMARK 465 GLY A 33 REMARK 465 LEU A 34 REMARK 465 ASP A 35 REMARK 465 ARG A 36 REMARK 465 VAL A 37 REMARK 465 GLN A 38 REMARK 465 ASP A 39 REMARK 465 GLU A 40 REMARK 465 TYR A 41 REMARK 465 SER A 42 REMARK 465 ARG A 43 REMARK 465 ARG A 44 REMARK 465 SER A 45 REMARK 465 TYR A 46 REMARK 465 SER A 47 REMARK 465 ARG A 48 REMARK 465 PHE A 49 REMARK 465 GLU A 50 REMARK 465 GLU A 51 REMARK 465 GLU A 52 REMARK 465 ASP A 53 REMARK 465 ASP A 54 REMARK 465 ASP A 55 REMARK 465 ASP A 56 REMARK 465 ASP A 57 REMARK 465 PHE A 58 REMARK 465 PRO A 59 REMARK 465 ALA A 60 REMARK 465 PRO A 61 REMARK 465 SER A 62 REMARK 465 ASP A 63 REMARK 465 GLY A 64 REMARK 465 TYR A 65 REMARK 465 TYR A 66 REMARK 465 ARG A 67 REMARK 465 GLY A 68 REMARK 465 GLU A 69 REMARK 465 GLY A 70 REMARK 465 THR A 71 REMARK 465 GLN A 72 REMARK 465 ASP A 73 REMARK 465 GLU A 74 REMARK 465 GLU A 75 REMARK 465 GLU A 76 REMARK 465 GLY A 77 REMARK 465 GLY A 78 REMARK 465 ALA A 79 REMARK 465 SER A 80 REMARK 465 SER A 81 REMARK 465 ASP A 82 REMARK 465 ALA A 83 REMARK 465 THR A 84 REMARK 465 GLU A 85 REMARK 465 GLY A 86 REMARK 465 HIS A 87 REMARK 465 ASP A 88 REMARK 465 GLU A 89 REMARK 465 ASP A 90 REMARK 465 ASP A 91 REMARK 465 GLU A 92 REMARK 465 ILE A 93 REMARK 465 TYR A 94 REMARK 465 GLU A 95 REMARK 465 GLY A 96 REMARK 465 GLU A 97 REMARK 465 TYR A 98 REMARK 465 GLN A 99 REMARK 465 GLY A 100 REMARK 465 ILE A 101 REMARK 465 PRO A 102 REMARK 465 ARG A 103 REMARK 465 ALA A 104 REMARK 465 GLU A 105 REMARK 465 SER A 106 REMARK 465 GLY A 107 REMARK 465 GLY A 108 REMARK 465 LYS A 109 REMARK 465 GLY A 110 REMARK 465 GLU A 111 REMARK 465 ARG A 112 REMARK 465 MET A 113 REMARK 465 ALA A 114 REMARK 465 ASP A 115 REMARK 465 GLY A 116 REMARK 465 ALA A 117 REMARK 465 PRO A 118 REMARK 465 LEU A 119 REMARK 465 ALA A 120 REMARK 465 GLY A 121 REMARK 465 VAL A 122 REMARK 465 ARG A 123 REMARK 465 GLY A 124 REMARK 465 GLY A 125 REMARK 465 LEU A 126 REMARK 465 SER A 127 REMARK 465 ASP A 128 REMARK 465 GLY A 129 REMARK 465 GLU A 130 REMARK 465 GLY A 131 REMARK 465 PRO A 132 REMARK 465 PRO A 133 REMARK 465 GLY A 134 REMARK 465 GLY A 135 REMARK 465 ARG A 136 REMARK 465 ASP A 404 REMARK 465 GLU A 405 REMARK 465 LEU A 406 REMARK 465 ILE A 407 REMARK 465 GLU A 408 REMARK 465 ILE A 409 REMARK 465 GLN A 410 REMARK 465 SER A 411 REMARK 465 ASP A 412 REMARK 465 THR A 413 REMARK 465 GLY A 414 REMARK 465 THR A 415 REMARK 465 TRP A 416 REMARK 465 TYR A 417 REMARK 465 LYS B 871 REMARK 465 ASN B 872 REMARK 465 ILE B 873 REMARK 465 VAL B 874 REMARK 465 ASN B 875 REMARK 465 LEU B 1296 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 231 NE - CZ - NH1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 231 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 359 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 PHE A 686 CB - CG - CD2 ANGL. DEV. = -9.1 DEGREES REMARK 500 PHE A 686 CB - CG - CD1 ANGL. DEV. = 11.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 202 -0.82 68.53 REMARK 500 PRO A 388 47.07 -83.37 REMARK 500 PHE A 439 52.15 -96.86 REMARK 500 THR A 588 -178.63 66.42 REMARK 500 PHE A 644 44.04 -87.51 REMARK 500 ILE A 710 -60.32 -96.91 REMARK 500 ASP B 910 53.87 -118.27 REMARK 500 LYS B 911 -8.81 -58.21 REMARK 500 PRO B 950 -173.73 -68.42 REMARK 500 ASP B1099 -166.40 -78.60 REMARK 500 ILE B1148 -58.26 -122.50 REMARK 500 TYR B1155 41.20 -105.14 REMARK 500 ASP B1256 56.60 36.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-36395 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF SV2A IN COMPLEX WITH BONT/A2 HC DBREF 8JLF A 2 742 UNP Q7L0J3 SV2A_HUMAN 2 742 DBREF 8JLF B 871 1296 UNP D2KCK3 D2KCK3_CLOBO 871 1296 SEQADV 8JLF MET A -7 UNP Q7L0J3 INITIATING METHIONINE SEQADV 8JLF ASP A -6 UNP Q7L0J3 EXPRESSION TAG SEQADV 8JLF TYR A -5 UNP Q7L0J3 EXPRESSION TAG SEQADV 8JLF LYS A -4 UNP Q7L0J3 EXPRESSION TAG SEQADV 8JLF ASP A -3 UNP Q7L0J3 EXPRESSION TAG SEQADV 8JLF ASP A -2 UNP Q7L0J3 EXPRESSION TAG SEQADV 8JLF ASP A -1 UNP Q7L0J3 EXPRESSION TAG SEQADV 8JLF ASP A 0 UNP Q7L0J3 EXPRESSION TAG SEQADV 8JLF LYS A 1 UNP Q7L0J3 EXPRESSION TAG SEQRES 1 A 750 MET ASP TYR LYS ASP ASP ASP ASP LYS GLU GLU GLY PHE SEQRES 2 A 750 ARG ASP ARG ALA ALA PHE ILE ARG GLY ALA LYS ASP ILE SEQRES 3 A 750 ALA LYS GLU VAL LYS LYS HIS ALA ALA LYS LYS VAL VAL SEQRES 4 A 750 LYS GLY LEU ASP ARG VAL GLN ASP GLU TYR SER ARG ARG SEQRES 5 A 750 SER TYR SER ARG PHE GLU GLU GLU ASP ASP ASP ASP ASP SEQRES 6 A 750 PHE PRO ALA PRO SER ASP GLY TYR TYR ARG GLY GLU GLY SEQRES 7 A 750 THR GLN ASP GLU GLU GLU GLY GLY ALA SER SER ASP ALA SEQRES 8 A 750 THR GLU GLY HIS ASP GLU ASP ASP GLU ILE TYR GLU GLY SEQRES 9 A 750 GLU TYR GLN GLY ILE PRO ARG ALA GLU SER GLY GLY LYS SEQRES 10 A 750 GLY GLU ARG MET ALA ASP GLY ALA PRO LEU ALA GLY VAL SEQRES 11 A 750 ARG GLY GLY LEU SER ASP GLY GLU GLY PRO PRO GLY GLY SEQRES 12 A 750 ARG GLY GLU ALA GLN ARG ARG LYS GLU ARG GLU GLU LEU SEQRES 13 A 750 ALA GLN GLN TYR GLU ALA ILE LEU ARG GLU CYS GLY HIS SEQRES 14 A 750 GLY ARG PHE GLN TRP THR LEU TYR PHE VAL LEU GLY LEU SEQRES 15 A 750 ALA LEU MET ALA ASP GLY VAL GLU VAL PHE VAL VAL GLY SEQRES 16 A 750 PHE VAL LEU PRO SER ALA GLU LYS ASP MET CYS LEU SER SEQRES 17 A 750 ASP SER ASN LYS GLY MET LEU GLY LEU ILE VAL TYR LEU SEQRES 18 A 750 GLY MET MET VAL GLY ALA PHE LEU TRP GLY GLY LEU ALA SEQRES 19 A 750 ASP ARG LEU GLY ARG ARG GLN CYS LEU LEU ILE SER LEU SEQRES 20 A 750 SER VAL ASN SER VAL PHE ALA PHE PHE SER SER PHE VAL SEQRES 21 A 750 GLN GLY TYR GLY THR PHE LEU PHE CYS ARG LEU LEU SER SEQRES 22 A 750 GLY VAL GLY ILE GLY GLY SER ILE PRO ILE VAL PHE SER SEQRES 23 A 750 TYR PHE SER GLU PHE LEU ALA GLN GLU LYS ARG GLY GLU SEQRES 24 A 750 HIS LEU SER TRP LEU CYS MET PHE TRP MET ILE GLY GLY SEQRES 25 A 750 VAL TYR ALA ALA ALA MET ALA TRP ALA ILE ILE PRO HIS SEQRES 26 A 750 TYR GLY TRP SER PHE GLN MET GLY SER ALA TYR GLN PHE SEQRES 27 A 750 HIS SER TRP ARG VAL PHE VAL LEU VAL CYS ALA PHE PRO SEQRES 28 A 750 SER VAL PHE ALA ILE GLY ALA LEU THR THR GLN PRO GLU SEQRES 29 A 750 SER PRO ARG PHE PHE LEU GLU ASN GLY LYS HIS ASP GLU SEQRES 30 A 750 ALA TRP MET VAL LEU LYS GLN VAL HIS ASP THR ASN MET SEQRES 31 A 750 ARG ALA LYS GLY HIS PRO GLU ARG VAL PHE SER VAL THR SEQRES 32 A 750 HIS ILE LYS THR ILE HIS GLN GLU ASP GLU LEU ILE GLU SEQRES 33 A 750 ILE GLN SER ASP THR GLY THR TRP TYR GLN ARG TRP GLY SEQRES 34 A 750 VAL ARG ALA LEU SER LEU GLY GLY GLN VAL TRP GLY ASN SEQRES 35 A 750 PHE LEU SER CYS PHE GLY PRO GLU TYR ARG ARG ILE THR SEQRES 36 A 750 LEU MET MET MET GLY VAL TRP PHE THR MET SER PHE SER SEQRES 37 A 750 TYR TYR GLY LEU THR VAL TRP PHE PRO ASP MET ILE ARG SEQRES 38 A 750 HIS LEU GLN ALA VAL ASP TYR ALA SER ARG THR LYS VAL SEQRES 39 A 750 PHE PRO GLY GLU ARG VAL GLU HIS VAL THR PHE ASN PHE SEQRES 40 A 750 THR LEU GLU ASN GLN ILE HIS ARG GLY GLY GLN TYR PHE SEQRES 41 A 750 ASN ASP LYS PHE ILE GLY LEU ARG LEU LYS SER VAL SER SEQRES 42 A 750 PHE GLU ASP SER LEU PHE GLU GLU CYS TYR PHE GLU ASP SEQRES 43 A 750 VAL THR SER SER ASN THR PHE PHE ARG ASN CYS THR PHE SEQRES 44 A 750 ILE ASN THR VAL PHE TYR ASN THR ASP LEU PHE GLU TYR SEQRES 45 A 750 LYS PHE VAL ASN SER ARG LEU ILE ASN SER THR PHE LEU SEQRES 46 A 750 HIS ASN LYS GLU GLY CYS PRO LEU ASP VAL THR GLY THR SEQRES 47 A 750 GLY GLU GLY ALA TYR MET VAL TYR PHE VAL SER PHE LEU SEQRES 48 A 750 GLY THR LEU ALA VAL LEU PRO GLY ASN ILE VAL SER ALA SEQRES 49 A 750 LEU LEU MET ASP LYS ILE GLY ARG LEU ARG MET LEU ALA SEQRES 50 A 750 GLY SER SER VAL MET SER CYS VAL SER CYS PHE PHE LEU SEQRES 51 A 750 SER PHE GLY ASN SER GLU SER ALA MET ILE ALA LEU LEU SEQRES 52 A 750 CYS LEU PHE GLY GLY VAL SER ILE ALA SER TRP ASN ALA SEQRES 53 A 750 LEU ASP VAL LEU THR VAL GLU LEU TYR PRO SER ASP LYS SEQRES 54 A 750 ARG THR THR ALA PHE GLY PHE LEU ASN ALA LEU CYS LYS SEQRES 55 A 750 LEU ALA ALA VAL LEU GLY ILE SER ILE PHE THR SER PHE SEQRES 56 A 750 VAL GLY ILE THR LYS ALA ALA PRO ILE LEU PHE ALA SER SEQRES 57 A 750 ALA ALA LEU ALA LEU GLY SER SER LEU ALA LEU LYS LEU SEQRES 58 A 750 PRO GLU THR ARG GLY GLN VAL LEU GLN SEQRES 1 B 426 LYS ASN ILE VAL ASN THR SER ILE LEU SER ILE VAL TYR SEQRES 2 B 426 LYS LYS ASP ASP LEU ILE ASP LEU SER ARG TYR GLY ALA SEQRES 3 B 426 LYS ILE ASN ILE GLY ASP ARG VAL TYR TYR ASP SER ILE SEQRES 4 B 426 ASP LYS ASN GLN ILE LYS LEU ILE ASN LEU GLU SER SER SEQRES 5 B 426 THR ILE GLU VAL ILE LEU LYS ASN ALA ILE VAL TYR ASN SEQRES 6 B 426 SER MET TYR GLU ASN PHE SER THR SER PHE TRP ILE LYS SEQRES 7 B 426 ILE PRO LYS TYR PHE SER LYS ILE ASN LEU ASN ASN GLU SEQRES 8 B 426 TYR THR ILE ILE ASN CYS ILE GLU ASN ASN SER GLY TRP SEQRES 9 B 426 LYS VAL SER LEU ASN TYR GLY GLU ILE ILE TRP THR LEU SEQRES 10 B 426 GLN ASP ASN LYS GLN ASN ILE GLN ARG VAL VAL PHE LYS SEQRES 11 B 426 TYR SER GLN MET VAL ASN ILE SER ASP TYR ILE ASN ARG SEQRES 12 B 426 TRP ILE PHE VAL THR ILE THR ASN ASN ARG LEU THR LYS SEQRES 13 B 426 SER LYS ILE TYR ILE ASN GLY ARG LEU ILE ASP GLN LYS SEQRES 14 B 426 PRO ILE SER ASN LEU GLY ASN ILE HIS ALA SER ASN LYS SEQRES 15 B 426 ILE MET PHE LYS LEU ASP GLY CYS ARG ASP PRO ARG ARG SEQRES 16 B 426 TYR ILE MET ILE LYS TYR PHE ASN LEU PHE ASP LYS GLU SEQRES 17 B 426 LEU ASN GLU LYS GLU ILE LYS ASP LEU TYR ASP SER GLN SEQRES 18 B 426 SER ASN SER GLY ILE LEU LYS ASP PHE TRP GLY ASN TYR SEQRES 19 B 426 LEU GLN TYR ASP LYS PRO TYR TYR MET LEU ASN LEU PHE SEQRES 20 B 426 ASP PRO ASN LYS TYR VAL ASP VAL ASN ASN ILE GLY ILE SEQRES 21 B 426 ARG GLY TYR MET TYR LEU LYS GLY PRO ARG GLY SER VAL SEQRES 22 B 426 VAL THR THR ASN ILE TYR LEU ASN SER THR LEU TYR GLU SEQRES 23 B 426 GLY THR LYS PHE ILE ILE LYS LYS TYR ALA SER GLY ASN SEQRES 24 B 426 GLU ASP ASN ILE VAL ARG ASN ASN ASP ARG VAL TYR ILE SEQRES 25 B 426 ASN VAL VAL VAL LYS ASN LYS GLU TYR ARG LEU ALA THR SEQRES 26 B 426 ASN ALA SER GLN ALA GLY VAL GLU LYS ILE LEU SER ALA SEQRES 27 B 426 LEU GLU ILE PRO ASP VAL GLY ASN LEU SER GLN VAL VAL SEQRES 28 B 426 VAL MET LYS SER LYS ASP ASP GLN GLY ILE ARG ASN LYS SEQRES 29 B 426 CYS LYS MET ASN LEU GLN ASP ASN ASN GLY ASN ASP ILE SEQRES 30 B 426 GLY PHE ILE GLY PHE HIS LEU TYR ASP ASN ILE ALA LYS SEQRES 31 B 426 LEU VAL ALA SER ASN TRP TYR ASN ARG GLN VAL GLY LYS SEQRES 32 B 426 ALA SER ARG THR PHE GLY CYS SER TRP GLU PHE ILE PRO SEQRES 33 B 426 VAL ASP ASP GLY TRP GLY GLU SER SER LEU HET NAG E 1 14 HET NAG E 2 14 HET FUC E 3 10 HET NAG A 801 14 HET NAG A 802 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 FUC C6 H12 O5 HELIX 1 AA1 GLY A 137 GLY A 160 1 24 HELIX 2 AA2 GLY A 162 VAL A 183 1 22 HELIX 3 AA3 PHE A 184 CYS A 198 1 15 HELIX 4 AA4 LEU A 209 GLY A 230 1 22 HELIX 5 AA5 GLY A 230 SER A 250 1 21 HELIX 6 AA6 TYR A 255 GLY A 270 1 16 HELIX 7 AA7 GLY A 271 SER A 281 1 11 HELIX 8 AA8 GLU A 282 LEU A 284 5 3 HELIX 9 AA9 ALA A 285 LYS A 288 5 4 HELIX 10 AB1 ARG A 289 TRP A 295 1 7 HELIX 11 AB2 CYS A 297 ILE A 315 1 19 HELIX 12 AB3 HIS A 331 THR A 352 1 22 HELIX 13 AB4 SER A 357 ASN A 364 1 8 HELIX 14 AB5 LYS A 366 GLY A 386 1 21 HELIX 15 AB6 ARG A 419 PHE A 439 1 21 HELIX 16 AB7 ARG A 444 ARG A 483 1 40 HELIX 17 AB8 PHE A 562 TYR A 564 5 3 HELIX 18 AB9 GLU A 592 THR A 605 1 14 HELIX 19 AC1 ALA A 607 GLY A 623 1 17 HELIX 20 AC2 GLY A 623 LEU A 642 1 20 HELIX 21 AC3 SER A 643 GLY A 645 5 3 HELIX 22 AC4 SER A 647 LEU A 676 1 30 HELIX 23 AC5 LYS A 681 SER A 706 1 26 HELIX 24 AC6 LYS A 712 LEU A 731 1 20 HELIX 25 AC7 LYS B 929 VAL B 933 5 5 HELIX 26 AC8 SER B 954 LEU B 958 5 5 HELIX 27 AC9 ASN B 1080 SER B 1092 1 13 HELIX 28 AD1 GLU B 1210 VAL B 1214 5 5 HELIX 29 AD2 ASN B 1265 LYS B 1273 1 9 SHEET 1 AA1 5 LYS A 485 THR A 496 0 SHEET 2 AA1 5 THR A 500 GLU A 527 1 O ARG A 507 N GLY A 489 SHEET 3 AA1 5 LEU A 530 GLU A 532 1 O LEU A 530 N TYR A 511 SHEET 4 AA1 5 THR A 550 ILE A 552 1 O THR A 550 N PHE A 531 SHEET 5 AA1 5 ARG A 570 ILE A 572 1 O ARG A 570 N PHE A 551 SHEET 1 AA2 8 PHE A 566 VAL A 567 0 SHEET 2 AA2 8 PHE A 545 ARG A 547 1 N PHE A 546 O VAL A 567 SHEET 3 AA2 8 THR A 500 GLU A 527 1 N PHE A 526 O ARG A 547 SHEET 4 AA2 8 TYR A 535 SER A 542 1 O TYR A 535 N PHE A 516 SHEET 5 AA2 8 VAL A 555 THR A 559 1 O TYR A 557 N PHE A 536 SHEET 6 AA2 8 SER A 574 LEU A 577 1 O THR A 575 N PHE A 556 SHEET 7 AA2 8 SER B1142 THR B1145 -1 O SER B1142 N PHE A 576 SHEET 8 AA2 8 TYR B1149 SER B1152 -1 O TYR B1149 N THR B1145 SHEET 1 AA3 5 ASP B 887 ASP B 890 0 SHEET 2 AA3 5 SER B 877 LYS B 884 -1 N VAL B 882 O ILE B 889 SHEET 3 AA3 5 TYR B1066 PHE B1075 -1 O LEU B1074 N LEU B 879 SHEET 4 AA3 5 ILE B 914 ILE B 917 -1 N LEU B 916 O ILE B1067 SHEET 5 AA3 5 TYR B 905 TYR B 906 -1 N TYR B 905 O LYS B 915 SHEET 1 AA4 7 ASP B 887 ASP B 890 0 SHEET 2 AA4 7 SER B 877 LYS B 884 -1 N VAL B 882 O ILE B 889 SHEET 3 AA4 7 TYR B1066 PHE B1075 -1 O LEU B1074 N LEU B 879 SHEET 4 AA4 7 PHE B 941 LYS B 948 -1 N SER B 942 O PHE B1075 SHEET 5 AA4 7 ILE B1015 ASN B1021 -1 O VAL B1017 N PHE B 945 SHEET 6 AA4 7 LYS B1026 ILE B1031 -1 O LYS B1028 N THR B1020 SHEET 7 AA4 7 ARG B1034 PRO B1040 -1 O ARG B1034 N ILE B1031 SHEET 1 AA5 7 LYS B 897 ILE B 900 0 SHEET 2 AA5 7 ILE B 924 ILE B 927 -1 O GLU B 925 N ASN B 899 SHEET 3 AA5 7 ALA B1049 ASP B1058 -1 O ILE B1053 N VAL B 926 SHEET 4 AA5 7 TYR B 962 ILE B 968 -1 N ASN B 966 O MET B1054 SHEET 5 AA5 7 GLY B 973 ASN B 979 -1 O VAL B 976 N ILE B 965 SHEET 6 AA5 7 GLU B 982 GLN B 988 -1 O GLN B 988 N GLY B 973 SHEET 7 AA5 7 ILE B 994 LYS B1000 -1 O VAL B 997 N TRP B 985 SHEET 1 AA6 2 TYR B1112 ASN B1115 0 SHEET 2 AA6 2 TRP B1282 ILE B1285 -1 O ILE B1285 N TYR B1112 SHEET 1 AA7 2 TYR B1122 VAL B1125 0 SHEET 2 AA7 2 MET B1134 LYS B1137 -1 O LYS B1137 N TYR B1122 SHEET 1 AA8 3 PHE B1160 LYS B1164 0 SHEET 2 AA8 3 ASP B1178 VAL B1186 -1 O ASN B1183 N ILE B1161 SHEET 3 AA8 3 LYS B1189 GLU B1190 -1 O LYS B1189 N VAL B1186 SHEET 1 AA9 7 PHE B1160 LYS B1164 0 SHEET 2 AA9 7 ASP B1178 VAL B1186 -1 O ASN B1183 N ILE B1161 SHEET 3 AA9 7 VAL B1220 LYS B1226 -1 O VAL B1221 N VAL B1180 SHEET 4 AA9 7 ARG B1232 GLN B1240 -1 O ASN B1238 N VAL B1222 SHEET 5 AA9 7 ASP B1246 TYR B1255 -1 O ILE B1250 N MET B1237 SHEET 6 AA9 7 ILE B1258 SER B1264 -1 O VAL B1262 N GLY B1251 SHEET 7 AA9 7 LYS B1204 ILE B1205 -1 N LYS B1204 O ALA B1263 SHEET 1 AB1 2 ARG B1192 ALA B1194 0 SHEET 2 AB1 2 SER B1207 LEU B1209 -1 O LEU B1209 N ARG B1192 LINK ND2 ASN A 498 C1 NAG A 801 1555 1555 1.47 LINK ND2 ASN A 548 C1 NAG A 802 1555 1555 1.47 LINK ND2 ASN A 573 C1 NAG E 1 1555 1555 1.43 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O6 NAG E 1 C1 FUC E 3 1555 1555 1.42 CISPEP 1 GLY B 1138 PRO B 1139 0 -8.12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000