HEADER DNA BINDING PROTEIN 05-JUN-23 8JMK TITLE STRUCTURE OF HELICOBACTER PYLORI SOJ MUTANT, D41A BOUND TO DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPOOJ REGULATOR (SOJ); COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP COMPND 9 *CP*T)-3'); COMPND 10 CHAIN: E; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP COMPND 15 *GP*A)-3'); COMPND 16 CHAIN: F; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI 26695; SOURCE 3 ORGANISM_TAXID: 85962; SOURCE 4 GENE: HP_1139; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS HELICOBACTER PYLORI, CHROMOSOME PARTITION, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.T.WU,C.H.CHU,Y.J.SUN REVDAT 3 24-JUL-24 8JMK 1 JRNL REVDAT 2 19-JUN-24 8JMK 1 JRNL REVDAT 1 29-MAY-24 8JMK 0 JRNL AUTH C.H.CHU,C.T.WU,M.G.LIN,C.Y.YEN,Y.Z.WU,C.D.HSIAO,Y.J.SUN JRNL TITL INSIGHTS INTO THE MOLECULAR MECHANISM OF PARABS SYSTEM IN JRNL TITL 2 CHROMOSOME PARTITION BY HPPARA AND HPPARB. JRNL REF NUCLEIC ACIDS RES. V. 52 7321 2024 JRNL REFN ESSN 1362-4962 JRNL PMID 38842933 JRNL DOI 10.1093/NAR/GKAE450 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 47.5 REMARK 3 NUMBER OF REFLECTIONS : 39518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.8790 - 6.3257 0.49 2966 149 0.1893 0.2299 REMARK 3 2 6.3257 - 5.0305 0.48 2944 150 0.2149 0.2891 REMARK 3 3 5.0305 - 4.3974 0.47 2874 146 0.1876 0.2436 REMARK 3 4 4.3974 - 3.9967 0.48 2898 149 0.2047 0.2934 REMARK 3 5 3.9967 - 3.7109 0.48 2956 145 0.2265 0.3329 REMARK 3 6 3.7109 - 3.4925 0.48 2931 142 0.2297 0.3248 REMARK 3 7 3.4925 - 3.3179 0.48 2920 147 0.2452 0.3389 REMARK 3 8 3.3179 - 3.1737 0.48 2942 144 0.2396 0.2959 REMARK 3 9 3.1737 - 3.0517 0.49 2949 148 0.2567 0.3576 REMARK 3 10 3.0517 - 2.9465 0.48 2990 144 0.2512 0.3534 REMARK 3 11 2.9465 - 2.8545 0.48 2941 150 0.2626 0.3335 REMARK 3 12 2.8545 - 2.7729 0.47 2817 141 0.2693 0.3794 REMARK 3 13 2.7729 - 2.7000 0.41 2508 127 0.2929 0.3870 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 9586 REMARK 3 ANGLE : 1.619 13192 REMARK 3 CHIRALITY : 0.110 1532 REMARK 3 PLANARITY : 0.007 1476 REMARK 3 DIHEDRAL : 21.391 3666 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 35.0209 -31.7739 70.5936 REMARK 3 T TENSOR REMARK 3 T11: 0.2189 T22: 0.1537 REMARK 3 T33: 0.2411 T12: 0.0695 REMARK 3 T13: -0.0505 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 1.1877 L22: 0.7169 REMARK 3 L33: 1.3255 L12: 0.5559 REMARK 3 L13: -0.7333 L23: -0.4970 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: -0.0063 S13: 0.0108 REMARK 3 S21: -0.0076 S22: -0.0240 S23: 0.0014 REMARK 3 S31: 0.0215 S32: -0.0169 S33: 0.0536 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8JMK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1300038175. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44627 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.33700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6IUC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% ETHYLENE GLYCOL, PH 5.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC E 2 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DC E 3 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DC E 4 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT E 5 O4' - C1' - N1 ANGL. DEV. = 5.9 DEGREES REMARK 500 DG E 6 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT E 7 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT E 8 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT E 9 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DA E 11 O4' - C1' - N9 ANGL. DEV. = 5.2 DEGREES REMARK 500 DG E 15 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG E 16 O4' - C1' - N9 ANGL. DEV. = 3.3 DEGREES REMARK 500 DC E 19 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA E 20 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DC E 22 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DT E 24 C1' - O4' - C4' ANGL. DEV. = -6.3 DEGREES REMARK 500 DT E 24 O4' - C1' - N1 ANGL. DEV. = 6.2 DEGREES REMARK 500 DA F 1 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT F 5 O4' - C1' - N1 ANGL. DEV. = 5.7 DEGREES REMARK 500 DG F 6 O4' - C1' - N9 ANGL. DEV. = 6.8 DEGREES REMARK 500 DT F 7 C3' - C2' - C1' ANGL. DEV. = -5.9 DEGREES REMARK 500 DT F 8 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC F 9 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC F 10 O4' - C1' - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DA F 11 O4' - C1' - N9 ANGL. DEV. = 4.3 DEGREES REMARK 500 DG F 15 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DA F 16 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA F 20 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG F 21 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG F 22 C3' - C2' - C1' ANGL. DEV. = -5.3 DEGREES REMARK 500 DG F 22 O4' - C1' - C2' ANGL. DEV. = -5.1 DEGREES REMARK 500 DG F 22 O4' - C1' - N9 ANGL. DEV. = 6.4 DEGREES REMARK 500 DG F 23 O4' - C4' - C3' ANGL. DEV. = -2.5 DEGREES REMARK 500 DA F 24 O4' - C4' - C3' ANGL. DEV. = -2.7 DEGREES REMARK 500 DA F 24 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 10 148.85 -172.38 REMARK 500 ASP A 58 -70.47 -73.10 REMARK 500 GLU A 105 -76.62 -111.73 REMARK 500 ARG A 108 -168.96 -100.02 REMARK 500 SER A 176 -78.67 -103.21 REMARK 500 ALA A 218 -72.87 -60.15 REMARK 500 GLU B 105 -75.81 -81.35 REMARK 500 ARG B 108 -168.45 -125.60 REMARK 500 SER B 176 -78.57 -118.33 REMARK 500 TYR B 244 -77.48 -100.63 REMARK 500 GLU C 105 -76.43 -103.94 REMARK 500 SER C 176 -81.35 -124.52 REMARK 500 GLU D 105 -70.73 -95.57 REMARK 500 SER D 176 -82.20 -122.04 REMARK 500 TYR D 244 -79.64 -101.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 18 OG1 REMARK 620 2 ATP A 501 O1G 145.1 REMARK 620 3 ATP A 501 O1B 88.3 77.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 18 OG1 REMARK 620 2 ATP B 301 O1G 149.1 REMARK 620 3 ATP B 301 O1B 86.8 77.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 18 OG1 REMARK 620 2 ATP C 301 O1G 148.1 REMARK 620 3 ATP C 301 O1B 88.0 71.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR D 18 OG1 REMARK 620 2 ATP D 301 O1G 153.8 REMARK 620 3 ATP D 301 O1B 87.3 77.7 REMARK 620 N 1 2 DBREF 8JMK A 1 264 UNP O25759 O25759_HELPY 1 264 DBREF 8JMK B 1 264 UNP O25759 O25759_HELPY 1 264 DBREF 8JMK C 1 264 UNP O25759 O25759_HELPY 1 264 DBREF 8JMK D 1 264 UNP O25759 O25759_HELPY 1 264 DBREF 8JMK E 1 24 PDB 8JMK 8JMK 1 24 DBREF 8JMK F 1 24 PDB 8JMK 8JMK 1 24 SEQADV 8JMK ALA A 41 UNP O25759 ASP 41 ENGINEERED MUTATION SEQADV 8JMK ALA B 41 UNP O25759 ASP 41 ENGINEERED MUTATION SEQADV 8JMK ALA C 41 UNP O25759 ASP 41 ENGINEERED MUTATION SEQADV 8JMK ALA D 41 UNP O25759 ASP 41 ENGINEERED MUTATION SEQRES 1 A 264 MET MET SER GLU ILE ILE ALA VAL ALA ASN GLN LYS GLY SEQRES 2 A 264 GLY VAL GLY LYS THR THR THR ALA VAL ASN LEU ALA ALA SEQRES 3 A 264 SER LEU ALA VAL HIS GLU LYS LYS ILE LEU LEU ILE ASP SEQRES 4 A 264 PHE ALA PRO GLN ALA ASN ALA THR SER SER LEU GLY PHE SEQRES 5 A 264 ARG ARG ASP LYS ILE ASP TYR ASP ILE TYR HIS VAL LEU SEQRES 6 A 264 ILE GLY ARG LYS GLN ILE SER GLN VAL ILE LEU LYS THR SEQRES 7 A 264 GLN MET PRO PHE LEU ASP LEU VAL PRO SER ASN LEU GLY SEQRES 8 A 264 LEU ALA GLY PHE GLU LYS THR PHE TYR ASP SER GLN ASP SEQRES 9 A 264 GLU ASN LYS ARG GLY GLU LEU MET LEU LYS ASN ALA LEU SEQRES 10 A 264 GLU SER VAL VAL GLY LEU TYR ASP TYR ILE ILE ILE ASP SEQRES 11 A 264 SER PRO PRO ALA LEU GLY PRO LEU THR ILE ASN SER LEU SEQRES 12 A 264 SER ALA ALA HIS SER VAL ILE ILE PRO ILE GLN CYS GLU SEQRES 13 A 264 PHE PHE ALA LEU GLU GLY THR LYS LEU LEU LEU ASN THR SEQRES 14 A 264 ILE ARG MET LEU GLN LYS SER THR ASN PRO LYS LEU LYS SEQRES 15 A 264 ILE ARG GLY PHE LEU PRO THR MET HIS VAL PRO GLN LEU SEQRES 16 A 264 ASN LEU THR LYS GLY VAL LEU ALA GLU LEU PHE LYS TYR SEQRES 17 A 264 PHE ASP SER GLU PHE PHE ARG ASP SER ALA THR GLY GLU SEQRES 18 A 264 TYR ILE MET ILE PRO LYS SER VAL LYS LEU ALA GLU SER SEQRES 19 A 264 PRO SER PHE GLY LYS PRO ILE LEU LEU TYR ASP ILE LYS SEQRES 20 A 264 SER ASN GLY SER ILE ALA TYR GLN LYS LEU ALA GLN SER SEQRES 21 A 264 ILE LEU GLN GLY SEQRES 1 B 264 MET MET SER GLU ILE ILE ALA VAL ALA ASN GLN LYS GLY SEQRES 2 B 264 GLY VAL GLY LYS THR THR THR ALA VAL ASN LEU ALA ALA SEQRES 3 B 264 SER LEU ALA VAL HIS GLU LYS LYS ILE LEU LEU ILE ASP SEQRES 4 B 264 PHE ALA PRO GLN ALA ASN ALA THR SER SER LEU GLY PHE SEQRES 5 B 264 ARG ARG ASP LYS ILE ASP TYR ASP ILE TYR HIS VAL LEU SEQRES 6 B 264 ILE GLY ARG LYS GLN ILE SER GLN VAL ILE LEU LYS THR SEQRES 7 B 264 GLN MET PRO PHE LEU ASP LEU VAL PRO SER ASN LEU GLY SEQRES 8 B 264 LEU ALA GLY PHE GLU LYS THR PHE TYR ASP SER GLN ASP SEQRES 9 B 264 GLU ASN LYS ARG GLY GLU LEU MET LEU LYS ASN ALA LEU SEQRES 10 B 264 GLU SER VAL VAL GLY LEU TYR ASP TYR ILE ILE ILE ASP SEQRES 11 B 264 SER PRO PRO ALA LEU GLY PRO LEU THR ILE ASN SER LEU SEQRES 12 B 264 SER ALA ALA HIS SER VAL ILE ILE PRO ILE GLN CYS GLU SEQRES 13 B 264 PHE PHE ALA LEU GLU GLY THR LYS LEU LEU LEU ASN THR SEQRES 14 B 264 ILE ARG MET LEU GLN LYS SER THR ASN PRO LYS LEU LYS SEQRES 15 B 264 ILE ARG GLY PHE LEU PRO THR MET HIS VAL PRO GLN LEU SEQRES 16 B 264 ASN LEU THR LYS GLY VAL LEU ALA GLU LEU PHE LYS TYR SEQRES 17 B 264 PHE ASP SER GLU PHE PHE ARG ASP SER ALA THR GLY GLU SEQRES 18 B 264 TYR ILE MET ILE PRO LYS SER VAL LYS LEU ALA GLU SER SEQRES 19 B 264 PRO SER PHE GLY LYS PRO ILE LEU LEU TYR ASP ILE LYS SEQRES 20 B 264 SER ASN GLY SER ILE ALA TYR GLN LYS LEU ALA GLN SER SEQRES 21 B 264 ILE LEU GLN GLY SEQRES 1 C 264 MET MET SER GLU ILE ILE ALA VAL ALA ASN GLN LYS GLY SEQRES 2 C 264 GLY VAL GLY LYS THR THR THR ALA VAL ASN LEU ALA ALA SEQRES 3 C 264 SER LEU ALA VAL HIS GLU LYS LYS ILE LEU LEU ILE ASP SEQRES 4 C 264 PHE ALA PRO GLN ALA ASN ALA THR SER SER LEU GLY PHE SEQRES 5 C 264 ARG ARG ASP LYS ILE ASP TYR ASP ILE TYR HIS VAL LEU SEQRES 6 C 264 ILE GLY ARG LYS GLN ILE SER GLN VAL ILE LEU LYS THR SEQRES 7 C 264 GLN MET PRO PHE LEU ASP LEU VAL PRO SER ASN LEU GLY SEQRES 8 C 264 LEU ALA GLY PHE GLU LYS THR PHE TYR ASP SER GLN ASP SEQRES 9 C 264 GLU ASN LYS ARG GLY GLU LEU MET LEU LYS ASN ALA LEU SEQRES 10 C 264 GLU SER VAL VAL GLY LEU TYR ASP TYR ILE ILE ILE ASP SEQRES 11 C 264 SER PRO PRO ALA LEU GLY PRO LEU THR ILE ASN SER LEU SEQRES 12 C 264 SER ALA ALA HIS SER VAL ILE ILE PRO ILE GLN CYS GLU SEQRES 13 C 264 PHE PHE ALA LEU GLU GLY THR LYS LEU LEU LEU ASN THR SEQRES 14 C 264 ILE ARG MET LEU GLN LYS SER THR ASN PRO LYS LEU LYS SEQRES 15 C 264 ILE ARG GLY PHE LEU PRO THR MET HIS VAL PRO GLN LEU SEQRES 16 C 264 ASN LEU THR LYS GLY VAL LEU ALA GLU LEU PHE LYS TYR SEQRES 17 C 264 PHE ASP SER GLU PHE PHE ARG ASP SER ALA THR GLY GLU SEQRES 18 C 264 TYR ILE MET ILE PRO LYS SER VAL LYS LEU ALA GLU SER SEQRES 19 C 264 PRO SER PHE GLY LYS PRO ILE LEU LEU TYR ASP ILE LYS SEQRES 20 C 264 SER ASN GLY SER ILE ALA TYR GLN LYS LEU ALA GLN SER SEQRES 21 C 264 ILE LEU GLN GLY SEQRES 1 D 264 MET MET SER GLU ILE ILE ALA VAL ALA ASN GLN LYS GLY SEQRES 2 D 264 GLY VAL GLY LYS THR THR THR ALA VAL ASN LEU ALA ALA SEQRES 3 D 264 SER LEU ALA VAL HIS GLU LYS LYS ILE LEU LEU ILE ASP SEQRES 4 D 264 PHE ALA PRO GLN ALA ASN ALA THR SER SER LEU GLY PHE SEQRES 5 D 264 ARG ARG ASP LYS ILE ASP TYR ASP ILE TYR HIS VAL LEU SEQRES 6 D 264 ILE GLY ARG LYS GLN ILE SER GLN VAL ILE LEU LYS THR SEQRES 7 D 264 GLN MET PRO PHE LEU ASP LEU VAL PRO SER ASN LEU GLY SEQRES 8 D 264 LEU ALA GLY PHE GLU LYS THR PHE TYR ASP SER GLN ASP SEQRES 9 D 264 GLU ASN LYS ARG GLY GLU LEU MET LEU LYS ASN ALA LEU SEQRES 10 D 264 GLU SER VAL VAL GLY LEU TYR ASP TYR ILE ILE ILE ASP SEQRES 11 D 264 SER PRO PRO ALA LEU GLY PRO LEU THR ILE ASN SER LEU SEQRES 12 D 264 SER ALA ALA HIS SER VAL ILE ILE PRO ILE GLN CYS GLU SEQRES 13 D 264 PHE PHE ALA LEU GLU GLY THR LYS LEU LEU LEU ASN THR SEQRES 14 D 264 ILE ARG MET LEU GLN LYS SER THR ASN PRO LYS LEU LYS SEQRES 15 D 264 ILE ARG GLY PHE LEU PRO THR MET HIS VAL PRO GLN LEU SEQRES 16 D 264 ASN LEU THR LYS GLY VAL LEU ALA GLU LEU PHE LYS TYR SEQRES 17 D 264 PHE ASP SER GLU PHE PHE ARG ASP SER ALA THR GLY GLU SEQRES 18 D 264 TYR ILE MET ILE PRO LYS SER VAL LYS LEU ALA GLU SER SEQRES 19 D 264 PRO SER PHE GLY LYS PRO ILE LEU LEU TYR ASP ILE LYS SEQRES 20 D 264 SER ASN GLY SER ILE ALA TYR GLN LYS LEU ALA GLN SER SEQRES 21 D 264 ILE LEU GLN GLY SEQRES 1 E 24 DT DC DC DC DT DG DT DT DT DC DA DC DG SEQRES 2 E 24 DT DG DG DA DA DC DA DC DC DC DT SEQRES 1 F 24 DA DG DG DG DT DG DT DT DC DC DA DC DG SEQRES 2 F 24 DT DG DA DA DA DC DA DG DG DG DA HET ATP A 501 31 HET MG A 502 1 HET ATP B 301 31 HET MG B 302 1 HET ATP C 301 31 HET MG C 302 1 HET ATP D 301 31 HET MG D 302 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 7 ATP 4(C10 H16 N5 O13 P3) FORMUL 8 MG 4(MG 2+) HELIX 1 AA1 GLY A 16 VAL A 30 1 15 HELIX 2 AA2 ALA A 44 SER A 49 1 6 HELIX 3 AA3 ARG A 53 ILE A 57 5 5 HELIX 4 AA4 ASP A 60 ILE A 66 1 7 HELIX 5 AA5 GLN A 70 ILE A 75 1 6 HELIX 6 AA6 ASN A 89 ALA A 93 5 5 HELIX 7 AA7 GLY A 94 ASP A 104 1 11 HELIX 8 AA8 LEU A 111 LEU A 117 1 7 HELIX 9 AA9 GLY A 136 ALA A 146 1 11 HELIX 10 AB1 PHE A 158 SER A 176 1 19 HELIX 11 AB2 LEU A 195 ASP A 210 1 16 HELIX 12 AB3 SER A 211 PHE A 213 5 3 HELIX 13 AB4 SER A 228 SER A 234 1 7 HELIX 14 AB5 PRO A 235 GLY A 238 5 4 HELIX 15 AB6 PRO A 240 ASP A 245 1 6 HELIX 16 AB7 SER A 248 GLN A 263 1 16 HELIX 17 AB8 GLY B 16 VAL B 30 1 15 HELIX 18 AB9 ALA B 44 LEU B 50 1 7 HELIX 19 AC1 ARG B 53 ILE B 57 5 5 HELIX 20 AC2 ASP B 60 ILE B 66 1 7 HELIX 21 AC3 GLN B 70 ILE B 75 1 6 HELIX 22 AC4 ASN B 89 ALA B 93 5 5 HELIX 23 AC5 GLY B 94 ASP B 101 1 8 HELIX 24 AC6 ASP B 101 ASN B 106 1 6 HELIX 25 AC7 LEU B 111 LEU B 117 1 7 HELIX 26 AC8 VAL B 120 TYR B 124 5 5 HELIX 27 AC9 GLY B 136 ALA B 145 1 10 HELIX 28 AD1 PHE B 158 SER B 176 1 19 HELIX 29 AD2 LEU B 195 ASP B 210 1 16 HELIX 30 AD3 SER B 211 PHE B 213 5 3 HELIX 31 AD4 SER B 228 SER B 234 1 7 HELIX 32 AD5 PRO B 235 GLY B 238 5 4 HELIX 33 AD6 PRO B 240 ASP B 245 1 6 HELIX 34 AD7 SER B 248 GLY B 264 1 17 HELIX 35 AD8 GLY C 16 VAL C 30 1 15 HELIX 36 AD9 ALA C 44 SER C 49 1 6 HELIX 37 AE1 ARG C 53 ILE C 57 5 5 HELIX 38 AE2 ASP C 60 ILE C 66 1 7 HELIX 39 AE3 GLN C 70 ILE C 75 1 6 HELIX 40 AE4 ASN C 89 ALA C 93 5 5 HELIX 41 AE5 GLY C 94 ASP C 104 1 11 HELIX 42 AE6 LEU C 111 GLU C 118 1 8 HELIX 43 AE7 GLY C 136 ALA C 146 1 11 HELIX 44 AE8 PHE C 158 LYS C 175 1 18 HELIX 45 AE9 LEU C 195 ASP C 210 1 16 HELIX 46 AF1 SER C 211 PHE C 213 5 3 HELIX 47 AF2 SER C 228 SER C 234 1 7 HELIX 48 AF3 PRO C 235 GLY C 238 5 4 HELIX 49 AF4 PRO C 240 ASP C 245 1 6 HELIX 50 AF5 SER C 248 GLN C 263 1 16 HELIX 51 AF6 GLY D 16 VAL D 30 1 15 HELIX 52 AF7 ALA D 44 LEU D 50 1 7 HELIX 53 AF8 ASP D 60 ILE D 66 1 7 HELIX 54 AF9 GLN D 70 ILE D 75 1 6 HELIX 55 AG1 ASN D 89 ALA D 93 5 5 HELIX 56 AG2 GLY D 94 ASN D 106 1 13 HELIX 57 AG3 LEU D 111 LEU D 117 1 7 HELIX 58 AG4 GLY D 136 ALA D 145 1 10 HELIX 59 AG5 PHE D 157 SER D 176 1 20 HELIX 60 AG6 LEU D 195 ASP D 210 1 16 HELIX 61 AG7 SER D 211 PHE D 213 5 3 HELIX 62 AG8 SER D 228 SER D 234 1 7 HELIX 63 AG9 PRO D 235 GLY D 238 5 4 HELIX 64 AH1 PRO D 240 TYR D 244 5 5 HELIX 65 AH2 SER D 248 GLN D 263 1 16 SHEET 1 AA1 7 LEU A 76 LYS A 77 0 SHEET 2 AA1 7 LEU A 83 VAL A 86 -1 O LEU A 85 N LEU A 76 SHEET 3 AA1 7 ILE A 35 ASP A 39 1 N ILE A 35 O ASP A 84 SHEET 4 AA1 7 TYR A 126 ASP A 130 1 O ILE A 128 N ILE A 38 SHEET 5 AA1 7 GLU A 4 VAL A 8 1 N VAL A 8 O ILE A 129 SHEET 6 AA1 7 SER A 148 GLN A 154 1 O ILE A 150 N ALA A 7 SHEET 7 AA1 7 LYS A 182 THR A 189 1 O LEU A 187 N ILE A 151 SHEET 1 AA2 7 LEU B 76 LYS B 77 0 SHEET 2 AA2 7 LEU B 83 VAL B 86 -1 O LEU B 85 N LEU B 76 SHEET 3 AA2 7 ILE B 35 ASP B 39 1 N LEU B 37 O ASP B 84 SHEET 4 AA2 7 TYR B 126 ASP B 130 1 O ILE B 128 N ILE B 38 SHEET 5 AA2 7 GLU B 4 VAL B 8 1 N VAL B 8 O ILE B 129 SHEET 6 AA2 7 SER B 148 GLN B 154 1 O ILE B 150 N ALA B 7 SHEET 7 AA2 7 LYS B 182 THR B 189 1 O LEU B 187 N ILE B 153 SHEET 1 AA3 7 LEU C 76 LYS C 77 0 SHEET 2 AA3 7 LEU C 83 VAL C 86 -1 O LEU C 85 N LEU C 76 SHEET 3 AA3 7 ILE C 35 ASP C 39 1 N LEU C 37 O VAL C 86 SHEET 4 AA3 7 TYR C 126 ASP C 130 1 O ILE C 128 N ILE C 38 SHEET 5 AA3 7 GLU C 4 VAL C 8 1 N ILE C 6 O ILE C 129 SHEET 6 AA3 7 SER C 148 GLN C 154 1 O ILE C 150 N ALA C 7 SHEET 7 AA3 7 LYS C 182 THR C 189 1 O LEU C 187 N ILE C 151 SHEET 1 AA4 7 LEU D 76 LYS D 77 0 SHEET 2 AA4 7 LEU D 83 VAL D 86 -1 O LEU D 85 N LEU D 76 SHEET 3 AA4 7 ILE D 35 ASP D 39 1 N LEU D 37 O ASP D 84 SHEET 4 AA4 7 TYR D 126 ASP D 130 1 O ILE D 128 N ILE D 38 SHEET 5 AA4 7 GLU D 4 VAL D 8 1 N VAL D 8 O ILE D 129 SHEET 6 AA4 7 SER D 148 GLN D 154 1 O SER D 148 N ALA D 7 SHEET 7 AA4 7 LYS D 182 THR D 189 1 O THR D 189 N ILE D 153 LINK OG1 THR A 18 MG MG A 502 1555 1555 2.70 LINK O1G ATP A 501 MG MG A 502 1555 1555 2.30 LINK O1B ATP A 501 MG MG A 502 1555 1555 2.19 LINK OG1 THR B 18 MG MG B 302 1555 1555 2.22 LINK O1G ATP B 301 MG MG B 302 1555 1555 2.23 LINK O1B ATP B 301 MG MG B 302 1555 1555 2.21 LINK OG1 THR C 18 MG MG C 302 1555 1555 2.23 LINK O1G ATP C 301 MG MG C 302 1555 1555 2.36 LINK O1B ATP C 301 MG MG C 302 1555 1555 2.37 LINK OG1 THR D 18 MG MG D 302 1555 1555 2.06 LINK O1G ATP D 301 MG MG D 302 1555 1555 2.05 LINK O1B ATP D 301 MG MG D 302 1555 1555 2.36 CRYST1 75.200 75.198 81.124 71.25 71.38 67.70 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013298 -0.005452 -0.003322 0.00000 SCALE2 0.000000 0.014373 -0.003372 0.00000 SCALE3 0.000000 0.000000 0.013361 0.00000