HEADER HYDROLASE 07-JUN-23 8JOI TITLE CRYSTAL STRUCTURE OF BEL-1 E166A MUTANT. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLA(BEL1); SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BETA-LACTAMASE, MUTANT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.DHANKHAR,S.HAZRA REVDAT 1 19-JUN-24 8JOI 0 JRNL AUTH K.DHANKHAR,S.HAZRA JRNL TITL CRYSTAL STRUCTURE OF BEL-1 E166A MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 67456 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.068 REMARK 3 FREE R VALUE TEST SET COUNT : 3419 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4667 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 274 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4009 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.72300 REMARK 3 B22 (A**2) : 1.72300 REMARK 3 B33 (A**2) : -5.59000 REMARK 3 B12 (A**2) : 0.86200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.414 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4100 ; 0.014 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3923 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5565 ; 1.992 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9015 ; 0.673 ; 1.566 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 528 ; 6.645 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 29 ;12.175 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 677 ;15.077 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 646 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4861 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 927 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 913 ; 0.237 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 44 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2059 ; 0.186 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 180 ; 0.262 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 2 ; 0.057 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2106 ; 2.747 ; 2.479 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2106 ; 2.746 ; 2.479 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2630 ; 3.752 ; 4.454 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2631 ; 3.752 ; 4.455 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1994 ; 3.189 ; 2.968 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1991 ; 3.166 ; 2.963 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2933 ; 4.317 ; 5.271 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2928 ; 4.271 ; 5.256 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 8023 ; 6.237 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 39.8739 19.7813 0.0387 REMARK 3 T TENSOR REMARK 3 T11: 0.0035 T22: 0.0014 REMARK 3 T33: 0.0601 T12: -0.0004 REMARK 3 T13: -0.0015 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.0069 L22: 0.0788 REMARK 3 L33: 0.0719 L12: -0.0219 REMARK 3 L13: -0.0121 L23: 0.0192 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0013 S13: -0.0030 REMARK 3 S21: -0.0123 S22: -0.0034 S23: 0.0080 REMARK 3 S31: 0.0073 S32: -0.0075 S33: 0.0012 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 35.8201 26.4366 32.7873 REMARK 3 T TENSOR REMARK 3 T11: 0.0007 T22: 0.0024 REMARK 3 T33: 0.0601 T12: 0.0003 REMARK 3 T13: 0.0005 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.0423 L22: 0.0445 REMARK 3 L33: 0.0652 L12: -0.0373 REMARK 3 L13: -0.0155 L23: 0.0009 REMARK 3 S TENSOR REMARK 3 S11: -0.0055 S12: -0.0034 S13: -0.0036 REMARK 3 S21: 0.0044 S22: 0.0060 S23: 0.0067 REMARK 3 S31: 0.0028 S32: -0.0099 S33: -0.0004 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8JOI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1300037975. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-6000HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67521 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 27.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE, 0.1M MES MONOHYDRATE, REMARK 280 20% ETG, 10% PEG 8000, 0.1M SODIUM FORMATE, 0.1M AMMONIUM REMARK 280 ACETATE, 0.1M SODIUM CITRATE TRIBASIC DIHYDRATE, 0.1M POTASSIUM REMARK 280 SODIUM TARTRATE, 0.1M SODIUM OXAMATE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 192 CE NZ REMARK 470 LYS A 228 CE NZ REMARK 470 LYS A 229 CE NZ REMARK 470 ARG A 258 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 165 CG CD CE NZ REMARK 470 LYS B 192 CE NZ REMARK 470 LYS B 228 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER B 103 HZ3 LYS B 207 1.18 REMARK 500 HG SER A 103 HZ3 LYS A 207 1.30 REMARK 500 O HOH B 355 O HOH B 399 1.72 REMARK 500 O ALA A 15 O HOH A 401 2.00 REMARK 500 O HOH A 491 O HOH A 507 2.03 REMARK 500 O HOH B 353 O HOH B 373 2.05 REMARK 500 O HOH B 310 O HOH B 352 2.06 REMARK 500 OD1 ASP B 200 O HOH B 301 2.18 REMARK 500 O HOH A 464 O HOH A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 H1 ASP A 1 O HOH A 410 5555 1.55 REMARK 500 H3 ASP A 1 O HOH A 410 5555 1.57 REMARK 500 N ASP A 1 O HOH A 410 5555 1.89 REMARK 500 N ASP B 1 O HOH B 368 6555 2.11 REMARK 500 O HOH A 462 O HOH B 383 1554 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 83 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 181 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 181 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 195 CB - CA - C ANGL. DEV. = -13.5 DEGREES REMARK 500 ARG A 195 CG - CD - NE ANGL. DEV. = -14.1 DEGREES REMARK 500 ARG B 181 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 181 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 195 CG - CD - NE ANGL. DEV. = -18.0 DEGREES REMARK 500 ARG B 195 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 41 -143.43 54.90 REMARK 500 ALA A 78 61.70 -159.27 REMARK 500 ASP A 136 -32.35 -131.85 REMARK 500 THR A 193 -122.99 -102.81 REMARK 500 CYS B 41 -144.48 55.27 REMARK 500 SER B 71 -47.03 -28.41 REMARK 500 ALA B 78 62.08 -163.73 REMARK 500 LEU B 142 1.76 -62.40 REMARK 500 THR B 193 -125.17 -107.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 126 0.09 SIDE CHAIN REMARK 500 ARG A 181 0.15 SIDE CHAIN REMARK 500 ARG B 37 0.16 SIDE CHAIN REMARK 500 ARG B 126 0.09 SIDE CHAIN REMARK 500 ARG B 258 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 425 DISTANCE = 6.55 ANGSTROMS DBREF 8JOI A 1 263 UNP Q3SAW3 Q3SAW3_PSEAI 21 283 DBREF 8JOI B 1 263 UNP Q3SAW3 Q3SAW3_PSEAI 21 283 SEQADV 8JOI ALA A 139 UNP Q3SAW3 GLU 159 ENGINEERED MUTATION SEQADV 8JOI ALA B 139 UNP Q3SAW3 GLU 159 ENGINEERED MUTATION SEQRES 1 A 263 ASP PHE GLU HIS ALA ILE SER ASP LEU GLU ALA HIS ASN SEQRES 2 A 263 GLN ALA LYS ILE GLY VAL ALA LEU VAL SER GLU ASN GLY SEQRES 3 A 263 ASN LEU ILE GLN GLY TYR ARG ALA ASN GLU ARG PHE ALA SEQRES 4 A 263 MET CYS SER THR PHE LYS LEU PRO LEU ALA ALA LEU VAL SEQRES 5 A 263 LEU SER ARG ILE ASP ALA GLY GLU GLU ASN PRO GLU ARG SEQRES 6 A 263 LYS LEU HIS TYR ASP SER ALA PHE LEU GLU GLU TYR ALA SEQRES 7 A 263 PRO ALA ALA LYS ARG TYR VAL ALA THR GLY TYR MET THR SEQRES 8 A 263 VAL THR GLU ALA ILE GLN SER ALA LEU GLN LEU SER ASP SEQRES 9 A 263 ASN ALA ALA ALA ASN LEU LEU LEU LYS GLU VAL GLY GLY SEQRES 10 A 263 PRO PRO LEU LEU THR LYS TYR PHE ARG SER LEU GLY ASP SEQRES 11 A 263 LYS VAL SER ARG LEU ASP ARG ILE ALA PRO THR LEU ASN SEQRES 12 A 263 THR ASN THR PRO GLY ASP GLU ARG ASP THR THR THR PRO SEQRES 13 A 263 MET SER MET ALA GLN THR VAL SER LYS LEU ILE PHE GLY SEQRES 14 A 263 ASP THR LEU THR TYR LYS SER LYS GLY GLN LEU ARG ARG SEQRES 15 A 263 LEU LEU ILE GLY ASN GLN THR GLY ASP LYS THR ILE ARG SEQRES 16 A 263 ALA GLY LEU PRO ASP SER TRP VAL THR GLY ASP LYS THR SEQRES 17 A 263 GLY SER CYS ALA ASN GLY GLY ARG ASN ASP VAL ALA PHE SEQRES 18 A 263 PHE ILE THR THR ALA GLY LYS LYS TYR VAL LEU SER VAL SEQRES 19 A 263 TYR THR ASN ALA PRO GLU LEU GLN GLY GLU GLU ARG ALA SEQRES 20 A 263 LEU LEU ILE ALA SER VAL ALA LYS LEU ALA ARG GLN TYR SEQRES 21 A 263 VAL VAL HIS SEQRES 1 B 263 ASP PHE GLU HIS ALA ILE SER ASP LEU GLU ALA HIS ASN SEQRES 2 B 263 GLN ALA LYS ILE GLY VAL ALA LEU VAL SER GLU ASN GLY SEQRES 3 B 263 ASN LEU ILE GLN GLY TYR ARG ALA ASN GLU ARG PHE ALA SEQRES 4 B 263 MET CYS SER THR PHE LYS LEU PRO LEU ALA ALA LEU VAL SEQRES 5 B 263 LEU SER ARG ILE ASP ALA GLY GLU GLU ASN PRO GLU ARG SEQRES 6 B 263 LYS LEU HIS TYR ASP SER ALA PHE LEU GLU GLU TYR ALA SEQRES 7 B 263 PRO ALA ALA LYS ARG TYR VAL ALA THR GLY TYR MET THR SEQRES 8 B 263 VAL THR GLU ALA ILE GLN SER ALA LEU GLN LEU SER ASP SEQRES 9 B 263 ASN ALA ALA ALA ASN LEU LEU LEU LYS GLU VAL GLY GLY SEQRES 10 B 263 PRO PRO LEU LEU THR LYS TYR PHE ARG SER LEU GLY ASP SEQRES 11 B 263 LYS VAL SER ARG LEU ASP ARG ILE ALA PRO THR LEU ASN SEQRES 12 B 263 THR ASN THR PRO GLY ASP GLU ARG ASP THR THR THR PRO SEQRES 13 B 263 MET SER MET ALA GLN THR VAL SER LYS LEU ILE PHE GLY SEQRES 14 B 263 ASP THR LEU THR TYR LYS SER LYS GLY GLN LEU ARG ARG SEQRES 15 B 263 LEU LEU ILE GLY ASN GLN THR GLY ASP LYS THR ILE ARG SEQRES 16 B 263 ALA GLY LEU PRO ASP SER TRP VAL THR GLY ASP LYS THR SEQRES 17 B 263 GLY SER CYS ALA ASN GLY GLY ARG ASN ASP VAL ALA PHE SEQRES 18 B 263 PHE ILE THR THR ALA GLY LYS LYS TYR VAL LEU SER VAL SEQRES 19 B 263 TYR THR ASN ALA PRO GLU LEU GLN GLY GLU GLU ARG ALA SEQRES 20 B 263 LEU LEU ILE ALA SER VAL ALA LYS LEU ALA ARG GLN TYR SEQRES 21 B 263 VAL VAL HIS HET MES A 301 25 HET BR A 302 1 HET PO4 A 303 5 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM BR BROMIDE ION HETNAM PO4 PHOSPHATE ION FORMUL 3 MES C6 H13 N O4 S FORMUL 4 BR BR 1- FORMUL 5 PO4 O4 P 3- FORMUL 6 HOH *249(H2 O) HELIX 1 AA1 ASP A 1 GLN A 14 1 14 HELIX 2 AA2 CYS A 41 THR A 43 5 3 HELIX 3 AA3 PHE A 44 ALA A 58 1 15 HELIX 4 AA4 ASP A 70 LEU A 74 5 5 HELIX 5 AA5 ALA A 78 VAL A 85 1 8 HELIX 6 AA6 VAL A 92 LEU A 102 1 11 HELIX 7 AA7 ASP A 104 GLY A 116 1 13 HELIX 8 AA8 GLY A 117 LEU A 128 1 12 HELIX 9 AA9 PRO A 140 THR A 144 5 5 HELIX 10 AB1 THR A 155 GLY A 169 1 15 HELIX 11 AB2 THR A 173 GLY A 186 1 14 HELIX 12 AB3 THR A 193 LEU A 198 5 6 HELIX 13 AB4 GLN A 242 VAL A 261 1 20 HELIX 14 AB5 PHE B 2 GLN B 14 1 13 HELIX 15 AB6 CYS B 41 THR B 43 5 3 HELIX 16 AB7 PHE B 44 ALA B 58 1 15 HELIX 17 AB8 ASP B 70 LEU B 74 5 5 HELIX 18 AB9 ALA B 78 VAL B 85 1 8 HELIX 19 AC1 VAL B 92 LEU B 102 1 11 HELIX 20 AC2 ASP B 104 GLY B 116 1 13 HELIX 21 AC3 GLY B 117 LEU B 128 1 12 HELIX 22 AC4 PRO B 140 THR B 144 5 5 HELIX 23 AC5 THR B 155 GLY B 169 1 15 HELIX 24 AC6 THR B 173 GLY B 186 1 14 HELIX 25 AC7 THR B 193 LEU B 198 5 6 HELIX 26 AC8 GLN B 242 HIS B 263 1 22 SHEET 1 AA1 5 LEU A 28 TYR A 32 0 SHEET 2 AA1 5 LYS A 16 SER A 23 -1 N LEU A 21 O ILE A 29 SHEET 3 AA1 5 LYS A 229 ASN A 237 -1 O TYR A 235 N GLY A 18 SHEET 4 AA1 5 GLY A 215 ILE A 223 -1 N ASP A 218 O VAL A 234 SHEET 5 AA1 5 VAL A 203 SER A 210 -1 N GLY A 209 O ASN A 217 SHEET 1 AA2 2 PHE A 38 ALA A 39 0 SHEET 2 AA2 2 THR A 153 THR A 154 -1 O THR A 154 N PHE A 38 SHEET 1 AA3 2 LYS A 66 HIS A 68 0 SHEET 2 AA3 2 TYR A 89 THR A 91 -1 O MET A 90 N LEU A 67 SHEET 1 AA4 5 LEU B 28 TYR B 32 0 SHEET 2 AA4 5 LYS B 16 SER B 23 -1 N LEU B 21 O ILE B 29 SHEET 3 AA4 5 LYS B 229 ASN B 237 -1 O TYR B 235 N GLY B 18 SHEET 4 AA4 5 GLY B 215 ILE B 223 -1 N ASP B 218 O VAL B 234 SHEET 5 AA4 5 VAL B 203 CYS B 211 -1 N GLY B 209 O ASN B 217 SHEET 1 AA5 2 PHE B 38 ALA B 39 0 SHEET 2 AA5 2 THR B 153 THR B 154 -1 O THR B 154 N PHE B 38 SHEET 1 AA6 2 LYS B 66 HIS B 68 0 SHEET 2 AA6 2 TYR B 89 THR B 91 -1 O MET B 90 N LEU B 67 SSBOND 1 CYS A 41 CYS A 211 1555 1555 1.83 SSBOND 2 CYS B 41 CYS B 211 1555 1555 2.24 CISPEP 1 ALA A 139 PRO A 140 0 -1.16 CISPEP 2 ALA B 139 PRO B 140 0 -4.46 CRYST1 123.498 123.498 70.644 90.00 90.00 120.00 P 6 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008097 0.004675 0.000000 0.00000 SCALE2 0.000000 0.009350 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014155 0.00000