HEADER SIGNALING PROTEIN 20-JUN-23 8JSJ TITLE CRYSTAL STRUCTURE OF AN N-TERMINAL CYCLIC NUCLEOTIDE-BINDING DOMAIN OF TITLE 2 A PYCTIR FROM NOVOSPHINGOBIUM PENTAROMATIVORANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYCTIR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: NCBI: WP_081473994.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOVOSPHINGOBIUM PENTAROMATIVORANS US6-1; SOURCE 3 ORGANISM_TAXID: 1088721; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CUMP RECEPTOR, PYCSAR EFFECTOR PROTEIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.-C.WANG,C.-S.YANG,M.-H.HOU,Y.CHEN REVDAT 2 17-JUL-24 8JSJ 1 COMPND JRNL REVDAT 1 03-JUL-24 8JSJ 0 JRNL AUTH M.H.HOU,C.J.CHEN,C.S.YANG,Y.C.WANG,Y.CHEN JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF CYCLIC JRNL TITL 2 PYRIMIDINE-REGULATED ANTI-PHAGE SYSTEM. JRNL REF NAT COMMUN V. 15 5634 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38965224 JRNL DOI 10.1038/S41467-024-49861-2 REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 4901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 247 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 175 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 49.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.3730 REMARK 3 BIN FREE R VALUE SET COUNT : 5 REMARK 3 BIN FREE R VALUE : 0.1600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1017 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04100 REMARK 3 B22 (A**2) : -0.04100 REMARK 3 B33 (A**2) : 0.13400 REMARK 3 B12 (A**2) : -0.02100 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.273 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.401 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.293 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.894 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.893 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.864 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1024 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1040 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1380 ; 1.451 ; 1.633 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2383 ; 1.135 ; 1.594 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 132 ; 8.969 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 55 ;30.882 ;21.818 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 191 ;22.793 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.384 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 138 ; 0.047 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1151 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 217 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 238 ; 0.245 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 44 ; 0.246 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 471 ; 0.156 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 31 ; 0.204 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 534 ; 4.218 ; 5.291 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 532 ; 4.208 ; 5.283 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 664 ; 6.882 ; 7.907 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 664 ; 6.890 ; 7.908 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 489 ; 4.801 ; 6.149 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 490 ; 4.798 ; 6.152 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 714 ; 7.749 ; 8.899 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 715 ; 7.743 ; 8.903 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8JSJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1300038779. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 07A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5229 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.858 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 34.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 85.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: ALPHAFOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.01 M CALCIUM REMARK 280 CHLORIDE DIHYDRATE,0.05 M SODIUM CACODYLATE TRIHYDRATE PH 6.5,10% REMARK 280 W/V POLYETHYLENE GLYCOL 4,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.23267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.11633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.67450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 15.55817 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 77.79083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.23267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 31.11633 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 15.55817 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 46.67450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 77.79083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 92 REMARK 465 GLY A 93 REMARK 465 THR A 94 REMARK 465 SER A 95 REMARK 465 PRO A 96 REMARK 465 ALA A 97 REMARK 465 ARG A 141 REMARK 465 LEU A 142 REMARK 465 ASP A 143 REMARK 465 GLU A 144 REMARK 465 ARG A 145 REMARK 465 ASN A 146 REMARK 465 LYS A 147 REMARK 465 GLY A 148 REMARK 465 ILE A 149 REMARK 465 GLY A 150 REMARK 465 GLN A 151 REMARK 465 THR A 152 REMARK 465 ASN A 153 REMARK 465 ASP A 154 REMARK 465 ILE A 155 REMARK 465 PRO A 156 REMARK 465 ARG A 157 REMARK 465 ILE A 158 REMARK 465 PHE A 159 REMARK 465 VAL A 160 REMARK 465 ILE A 161 REMARK 465 SER A 162 REMARK 465 SER A 163 REMARK 465 SER A 164 REMARK 465 GLU A 165 REMARK 465 LYS A 166 REMARK 465 ILE A 167 REMARK 465 GLY A 168 REMARK 465 VAL A 169 REMARK 465 ALA A 170 REMARK 465 ASN A 171 REMARK 465 GLU A 172 REMARK 465 ILE A 173 REMARK 465 VAL A 174 REMARK 465 ARG A 175 REMARK 465 ASN A 176 REMARK 465 LEU A 177 REMARK 465 ASP A 178 REMARK 465 SER A 179 REMARK 465 LYS A 180 REMARK 465 GLU A 181 REMARK 465 ILE A 182 REMARK 465 ALA A 183 REMARK 465 VAL A 184 REMARK 465 GLN A 185 REMARK 465 LEU A 186 REMARK 465 TRP A 187 REMARK 465 ASP A 188 REMARK 465 LYS A 189 REMARK 465 GLY A 190 REMARK 465 THR A 191 REMARK 465 PHE A 192 REMARK 465 GLY A 193 REMARK 465 ILE A 194 REMARK 465 SER A 195 REMARK 465 ASP A 196 REMARK 465 TYR A 197 REMARK 465 PRO A 198 REMARK 465 ILE A 199 REMARK 465 SER A 200 REMARK 465 SER A 201 REMARK 465 LEU A 202 REMARK 465 MET A 203 REMARK 465 ASP A 204 REMARK 465 ALA A 205 REMARK 465 ILE A 206 REMARK 465 GLU A 207 REMARK 465 SER A 208 REMARK 465 SER A 209 REMARK 465 ASP A 210 REMARK 465 PHE A 211 REMARK 465 THR A 212 REMARK 465 ILE A 213 REMARK 465 ALA A 214 REMARK 465 VAL A 215 REMARK 465 VAL A 216 REMARK 465 GLY A 217 REMARK 465 ALA A 218 REMARK 465 ASP A 219 REMARK 465 ASP A 220 REMARK 465 THR A 221 REMARK 465 LEU A 222 REMARK 465 THR A 223 REMARK 465 MET A 224 REMARK 465 ARG A 225 REMARK 465 GLY A 226 REMARK 465 GLU A 227 REMARK 465 THR A 228 REMARK 465 HIS A 229 REMARK 465 GLN A 230 REMARK 465 VAL A 231 REMARK 465 ALA A 232 REMARK 465 ARG A 233 REMARK 465 ASP A 234 REMARK 465 ASN A 235 REMARK 465 VAL A 236 REMARK 465 HIS A 237 REMARK 465 LEU A 238 REMARK 465 GLU A 239 REMARK 465 PHE A 240 REMARK 465 GLY A 241 REMARK 465 ILE A 242 REMARK 465 SER A 243 REMARK 465 LEU A 244 REMARK 465 GLY A 245 REMARK 465 VAL A 246 REMARK 465 LEU A 247 REMARK 465 GLY A 248 REMARK 465 ARG A 249 REMARK 465 ARG A 250 REMARK 465 ARG A 251 REMARK 465 SER A 252 REMARK 465 MET A 253 REMARK 465 LEU A 254 REMARK 465 LEU A 255 REMARK 465 VAL A 256 REMARK 465 CYS A 257 REMARK 465 ALA A 258 REMARK 465 ASP A 259 REMARK 465 ASP A 260 REMARK 465 GLY A 261 REMARK 465 VAL A 262 REMARK 465 ARG A 263 REMARK 465 LEU A 264 REMARK 465 PRO A 265 REMARK 465 SER A 266 REMARK 465 ASP A 267 REMARK 465 ALA A 268 REMARK 465 ALA A 269 REMARK 465 GLY A 270 REMARK 465 LEU A 271 REMARK 465 THR A 272 REMARK 465 THR A 273 REMARK 465 LEU A 274 REMARK 465 ARG A 275 REMARK 465 TYR A 276 REMARK 465 ARG A 277 REMARK 465 THR A 278 REMARK 465 GLY A 279 REMARK 465 SER A 280 REMARK 465 ASP A 281 REMARK 465 ASP A 282 REMARK 465 GLU A 283 REMARK 465 MET A 284 REMARK 465 LYS A 285 REMARK 465 ARG A 286 REMARK 465 THR A 287 REMARK 465 VAL A 288 REMARK 465 ARG A 289 REMARK 465 ASN A 290 REMARK 465 ALA A 291 REMARK 465 CYS A 292 REMARK 465 ILE A 293 REMARK 465 GLU A 294 REMARK 465 ALA A 295 REMARK 465 LYS A 296 REMARK 465 GLU A 297 REMARK 465 HIS A 298 REMARK 465 ILE A 299 REMARK 465 GLU A 300 REMARK 465 LYS A 301 REMARK 465 GLU A 302 REMARK 465 GLY A 303 REMARK 465 VAL A 304 REMARK 465 PHE A 305 REMARK 465 THR A 306 REMARK 465 ASP A 307 REMARK 465 ARG A 308 REMARK 465 ARG A 309 REMARK 465 ALA A 310 REMARK 465 ARG A 311 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 8 -34.13 -138.41 REMARK 500 ALA A 28 80.10 40.22 REMARK 500 ASN A 29 37.79 32.35 REMARK 500 ASP A 48 124.77 -38.19 REMARK 500 ASN A 75 14.10 50.75 REMARK 500 GLN A 79 -94.75 -114.37 REMARK 500 ALA A 84 127.94 -39.77 REMARK 500 PRO A 99 -165.82 -69.43 REMARK 500 THR A 118 -72.01 -51.35 REMARK 500 THR A 124 -68.52 -23.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 446 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A 447 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH A 448 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH A 449 DISTANCE = 7.21 ANGSTROMS REMARK 525 HOH A 450 DISTANCE = 11.26 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8JSF RELATED DB: PDB DBREF 8JSJ A 1 311 PDB 8JSJ 8JSJ 1 311 SEQRES 1 A 311 MET GLY ALA LEU LEU ASP ARG PHE SER GLY ASP GLU LYS SEQRES 2 A 311 LYS GLY ARG LEU ILE GLU ALA VAL CYS GLY GLN ASP LEU SEQRES 3 A 311 VAL ALA ASN ASP LYS ASP LEU ALA GLU GLN ILE VAL ALA SEQRES 4 A 311 ALA GLY VAL LEU GLN GLU ILE ALA ASP GLY ASP VAL ILE SEQRES 5 A 311 ILE LYS GLN GLY ASP TRP ASP ASP ASP LEU PHE LEU ILE SEQRES 6 A 311 LEU ALA GLY LYS MET GLN ILE THR ILE ASN GLY ARG PRO SEQRES 7 A 311 GLN THR VAL ARG GLU ALA GLY THR HIS VAL GLY GLU LEU SEQRES 8 A 311 THR GLY THR SER PRO ALA ARG PRO ARG THR ALA THR VAL SEQRES 9 A 311 SER ALA ILE GLY GLU ALA LEU VAL LEU ARG LEU LYS ARG SEQRES 10 A 311 THR VAL LEU ASP GLU ILE THR ARG ASP SER PRO ALA TYR SEQRES 11 A 311 LEU LYS ARG MET LEU ASP VAL VAL ALA GLY ARG LEU ASP SEQRES 12 A 311 GLU ARG ASN LYS GLY ILE GLY GLN THR ASN ASP ILE PRO SEQRES 13 A 311 ARG ILE PHE VAL ILE SER SER SER GLU LYS ILE GLY VAL SEQRES 14 A 311 ALA ASN GLU ILE VAL ARG ASN LEU ASP SER LYS GLU ILE SEQRES 15 A 311 ALA VAL GLN LEU TRP ASP LYS GLY THR PHE GLY ILE SER SEQRES 16 A 311 ASP TYR PRO ILE SER SER LEU MET ASP ALA ILE GLU SER SEQRES 17 A 311 SER ASP PHE THR ILE ALA VAL VAL GLY ALA ASP ASP THR SEQRES 18 A 311 LEU THR MET ARG GLY GLU THR HIS GLN VAL ALA ARG ASP SEQRES 19 A 311 ASN VAL HIS LEU GLU PHE GLY ILE SER LEU GLY VAL LEU SEQRES 20 A 311 GLY ARG ARG ARG SER MET LEU LEU VAL CYS ALA ASP ASP SEQRES 21 A 311 GLY VAL ARG LEU PRO SER ASP ALA ALA GLY LEU THR THR SEQRES 22 A 311 LEU ARG TYR ARG THR GLY SER ASP ASP GLU MET LYS ARG SEQRES 23 A 311 THR VAL ARG ASN ALA CYS ILE GLU ALA LYS GLU HIS ILE SEQRES 24 A 311 GLU LYS GLU GLY VAL PHE THR ASP ARG ARG ALA ARG FORMUL 2 HOH *50(H2 O) HELIX 1 AA1 GLY A 2 ARG A 7 1 6 HELIX 2 AA2 GLY A 10 GLU A 12 5 3 HELIX 3 AA3 LYS A 13 GLY A 23 1 11 HELIX 4 AA4 ASP A 30 GLY A 41 1 12 HELIX 5 AA5 ARG A 117 ARG A 125 1 9 HELIX 6 AA6 SER A 127 VAL A 137 1 11 SHEET 1 AA1 4 VAL A 42 ILE A 46 0 SHEET 2 AA1 4 SER A 105 LYS A 116 -1 O ALA A 110 N ILE A 46 SHEET 3 AA1 4 ASP A 61 ILE A 74 -1 N LYS A 69 O ILE A 107 SHEET 4 AA1 4 ARG A 77 GLU A 83 -1 O ARG A 77 N ILE A 74 SHEET 1 AA2 4 VAL A 42 ILE A 46 0 SHEET 2 AA2 4 SER A 105 LYS A 116 -1 O ALA A 110 N ILE A 46 SHEET 3 AA2 4 ASP A 61 ILE A 74 -1 N LYS A 69 O ILE A 107 SHEET 4 AA2 4 HIS A 87 VAL A 88 -1 O VAL A 88 N PHE A 63 CRYST1 87.115 87.115 93.349 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011479 0.006627 0.000000 0.00000 SCALE2 0.000000 0.013255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010712 0.00000