data_8K1E # _entry.id 8K1E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8K1E pdb_00008k1e 10.2210/pdb8k1e/pdb WWPDB D_1300039212 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-01-15 ? 2 'Structure model' 1 1 2025-07-30 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8K1E _pdbx_database_status.recvd_initial_deposition_date 2023-07-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email huanglin36@mail.sysu.edu.cn _pdbx_contact_author.name_first Lin _pdbx_contact_author.name_last Huang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2121-365X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'He, Y.' 1 ? 'Deng, J.' 2 ? 'Lin, X.' 3 ? 'Huang, L.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Discov' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2056-5968 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 128 _citation.page_last 128 _citation.title 'Structural basis for tRNA mimicry by mascRNA and menRNA.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41421-024-00761-1 _citation.pdbx_database_id_PubMed 39743619 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, Y.' 1 0009-0001-6301-881X primary 'Deng, J.' 2 ? primary 'Lin, X.' 3 ? primary 'Lu, Z.' 4 ? primary 'Wang, L.' 5 ? primary 'Xu, L.' 6 ? primary 'Zhang, Y.' 7 ? primary 'Wang, J.' 8 ? primary 'Huang, L.' 9 0000-0002-2121-365X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (58-MER)' 18787.129 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 5 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 7 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 5 water nat water 18.015 82 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCGCUGGUGGUGGCACGUCCAGCACGGCUGGGCCGGGGUUCGAGUCCCCGCAGUGUU _entity_poly.pdbx_seq_one_letter_code_can GGCGCUGGUGGUGGCACGUCCAGCACGGCUGGGCCGGGGUUCGAGUCCCCGCAGUGUU _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'SODIUM ION' NA 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 G n 1 5 C n 1 6 U n 1 7 G n 1 8 G n 1 9 U n 1 10 G n 1 11 G n 1 12 U n 1 13 G n 1 14 G n 1 15 C n 1 16 A n 1 17 C n 1 18 G n 1 19 U n 1 20 C n 1 21 C n 1 22 A n 1 23 G n 1 24 C n 1 25 A n 1 26 C n 1 27 G n 1 28 G n 1 29 C n 1 30 U n 1 31 G n 1 32 G n 1 33 G n 1 34 C n 1 35 C n 1 36 G n 1 37 G n 1 38 G n 1 39 G n 1 40 U n 1 41 U n 1 42 C n 1 43 G n 1 44 A n 1 45 G n 1 46 U n 1 47 C n 1 48 C n 1 49 C n 1 50 C n 1 51 G n 1 52 C n 1 53 A n 1 54 G n 1 55 U n 1 56 G n 1 57 U n 1 58 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 58 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 G 4 4 4 G G A . n A 1 5 C 5 5 5 C C A . n A 1 6 U 6 6 6 U U A . n A 1 7 G 7 7 7 G G A . n A 1 8 G 8 8 8 G G A . n A 1 9 U 9 9 9 U U A . n A 1 10 G 10 10 10 G G A . n A 1 11 G 11 11 11 G G A . n A 1 12 U 12 12 ? ? ? A . n A 1 13 G 13 13 13 G G A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n A 1 16 A 16 16 16 A A A . n A 1 17 C 17 17 17 C C A . n A 1 18 G 18 18 18 G G A . n A 1 19 U 19 19 19 U U A . n A 1 20 C 20 20 20 C C A . n A 1 21 C 21 21 21 C C A . n A 1 22 A 22 22 22 A A A . n A 1 23 G 23 23 23 G G A . n A 1 24 C 24 24 24 C C A . n A 1 25 A 25 25 25 A A A . n A 1 26 C 26 26 26 C C A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 C 29 29 29 C C A . n A 1 30 U 30 30 30 U U A . n A 1 31 G 31 31 31 G G A . n A 1 32 G 32 32 32 G G A . n A 1 33 G 33 33 33 G G A . n A 1 34 C 34 34 34 C C A . n A 1 35 C 35 35 35 C C A . n A 1 36 G 36 36 36 G G A . n A 1 37 G 37 37 37 G G A . n A 1 38 G 38 38 38 G G A . n A 1 39 G 39 39 39 G G A . n A 1 40 U 40 40 40 U U A . n A 1 41 U 41 41 41 U U A . n A 1 42 C 42 42 42 C C A . n A 1 43 G 43 43 43 G G A . n A 1 44 A 44 44 44 A A A . n A 1 45 G 45 45 45 G G A . n A 1 46 U 46 46 46 U U A . n A 1 47 C 47 47 47 C C A . n A 1 48 C 48 48 48 C C A . n A 1 49 C 49 49 49 C C A . n A 1 50 C 50 50 50 C C A . n A 1 51 G 51 51 51 G G A . n A 1 52 C 52 52 52 C C A . n A 1 53 A 53 53 53 A A A . n A 1 54 G 54 54 54 G G A . n A 1 55 U 55 55 55 U U A . n A 1 56 G 56 56 56 G G A . n A 1 57 U 57 57 57 U U A . n A 1 58 U 58 58 58 U U A . n B 1 1 G 1 1 1 G G B . n B 1 2 G 2 2 2 G G B . n B 1 3 C 3 3 3 C C B . n B 1 4 G 4 4 4 G G B . n B 1 5 C 5 5 5 C C B . n B 1 6 U 6 6 6 U U B . n B 1 7 G 7 7 7 G G B . n B 1 8 G 8 8 8 G G B . n B 1 9 U 9 9 9 U U B . n B 1 10 G 10 10 10 G G B . n B 1 11 G 11 11 11 G G B . n B 1 12 U 12 12 ? ? ? B . n B 1 13 G 13 13 13 G G B . n B 1 14 G 14 14 14 G G B . n B 1 15 C 15 15 15 C C B . n B 1 16 A 16 16 16 A A B . n B 1 17 C 17 17 17 C C B . n B 1 18 G 18 18 18 G G B . n B 1 19 U 19 19 19 U U B . n B 1 20 C 20 20 20 C C B . n B 1 21 C 21 21 21 C C B . n B 1 22 A 22 22 22 A A B . n B 1 23 G 23 23 23 G G B . n B 1 24 C 24 24 24 C C B . n B 1 25 A 25 25 ? ? ? B . n B 1 26 C 26 26 ? ? ? B . n B 1 27 G 27 27 ? ? ? B . n B 1 28 G 28 28 28 G G B . n B 1 29 C 29 29 29 C C B . n B 1 30 U 30 30 30 U U B . n B 1 31 G 31 31 31 G G B . n B 1 32 G 32 32 32 G G B . n B 1 33 G 33 33 33 G G B . n B 1 34 C 34 34 34 C C B . n B 1 35 C 35 35 35 C C B . n B 1 36 G 36 36 36 G G B . n B 1 37 G 37 37 37 G G B . n B 1 38 G 38 38 38 G G B . n B 1 39 G 39 39 39 G G B . n B 1 40 U 40 40 40 U U B . n B 1 41 U 41 41 41 U U B . n B 1 42 C 42 42 42 C C B . n B 1 43 G 43 43 43 G G B . n B 1 44 A 44 44 44 A A B . n B 1 45 G 45 45 45 G G B . n B 1 46 U 46 46 46 U U B . n B 1 47 C 47 47 47 C C B . n B 1 48 C 48 48 48 C C B . n B 1 49 C 49 49 49 C C B . n B 1 50 C 50 50 50 C C B . n B 1 51 G 51 51 51 G G B . n B 1 52 C 52 52 52 C C B . n B 1 53 A 53 53 53 A A B . n B 1 54 G 54 54 54 G G B . n B 1 55 U 55 55 55 U U B . n B 1 56 G 56 56 56 G G B . n B 1 57 U 57 57 57 U U B . n B 1 58 U 58 58 58 U U B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 2 K 1 102 2 K K A . E 2 K 1 103 3 K K A . F 2 K 1 104 4 K K A . G 2 K 1 105 5 K K A . H 3 NA 1 106 2 NA NA A . I 3 NA 1 107 3 NA NA A . J 3 NA 1 108 5 NA NA A . K 3 NA 1 109 7 NA NA A . L 3 NA 1 110 8 NA NA A . M 4 MG 1 111 1 MG MG A . N 4 MG 1 112 2 MG MG A . O 4 MG 1 113 3 MG MG A . P 4 MG 1 114 4 MG MG A . Q 3 NA 1 101 6 NA NA B . R 3 NA 1 102 9 NA NA B . S 5 HOH 1 201 69 HOH HOH A . S 5 HOH 2 202 37 HOH HOH A . S 5 HOH 3 203 59 HOH HOH A . S 5 HOH 4 204 11 HOH HOH A . S 5 HOH 5 205 47 HOH HOH A . S 5 HOH 6 206 65 HOH HOH A . S 5 HOH 7 207 33 HOH HOH A . S 5 HOH 8 208 2 HOH HOH A . S 5 HOH 9 209 7 HOH HOH A . S 5 HOH 10 210 50 HOH HOH A . S 5 HOH 11 211 20 HOH HOH A . S 5 HOH 12 212 4 HOH HOH A . S 5 HOH 13 213 24 HOH HOH A . S 5 HOH 14 214 63 HOH HOH A . S 5 HOH 15 215 12 HOH HOH A . S 5 HOH 16 216 73 HOH HOH A . S 5 HOH 17 217 25 HOH HOH A . S 5 HOH 18 218 18 HOH HOH A . S 5 HOH 19 219 78 HOH HOH A . S 5 HOH 20 220 15 HOH HOH A . S 5 HOH 21 221 21 HOH HOH A . S 5 HOH 22 222 17 HOH HOH A . S 5 HOH 23 223 44 HOH HOH A . S 5 HOH 24 224 9 HOH HOH A . S 5 HOH 25 225 53 HOH HOH A . S 5 HOH 26 226 6 HOH HOH A . S 5 HOH 27 227 51 HOH HOH A . S 5 HOH 28 228 41 HOH HOH A . S 5 HOH 29 229 5 HOH HOH A . S 5 HOH 30 230 68 HOH HOH A . S 5 HOH 31 231 49 HOH HOH A . S 5 HOH 32 232 1 HOH HOH A . S 5 HOH 33 233 3 HOH HOH A . S 5 HOH 34 234 62 HOH HOH A . S 5 HOH 35 235 58 HOH HOH A . S 5 HOH 36 236 38 HOH HOH A . S 5 HOH 37 237 81 HOH HOH A . S 5 HOH 38 238 23 HOH HOH A . S 5 HOH 39 239 57 HOH HOH A . S 5 HOH 40 240 8 HOH HOH A . S 5 HOH 41 241 66 HOH HOH A . S 5 HOH 42 242 13 HOH HOH A . S 5 HOH 43 243 26 HOH HOH A . S 5 HOH 44 244 71 HOH HOH A . S 5 HOH 45 245 45 HOH HOH A . S 5 HOH 46 246 54 HOH HOH A . S 5 HOH 47 247 52 HOH HOH A . S 5 HOH 48 248 22 HOH HOH A . S 5 HOH 49 249 46 HOH HOH A . S 5 HOH 50 250 79 HOH HOH A . S 5 HOH 51 251 76 HOH HOH A . S 5 HOH 52 252 34 HOH HOH A . S 5 HOH 53 253 19 HOH HOH A . S 5 HOH 54 254 43 HOH HOH A . S 5 HOH 55 255 35 HOH HOH A . S 5 HOH 56 256 60 HOH HOH A . S 5 HOH 57 257 80 HOH HOH A . S 5 HOH 58 258 77 HOH HOH A . S 5 HOH 59 259 31 HOH HOH A . S 5 HOH 60 260 55 HOH HOH A . S 5 HOH 61 261 61 HOH HOH A . T 5 HOH 1 201 27 HOH HOH B . T 5 HOH 2 202 40 HOH HOH B . T 5 HOH 3 203 72 HOH HOH B . T 5 HOH 4 204 67 HOH HOH B . T 5 HOH 5 205 14 HOH HOH B . T 5 HOH 6 206 75 HOH HOH B . T 5 HOH 7 207 48 HOH HOH B . T 5 HOH 8 208 32 HOH HOH B . T 5 HOH 9 209 30 HOH HOH B . T 5 HOH 10 210 36 HOH HOH B . T 5 HOH 11 211 82 HOH HOH B . T 5 HOH 12 212 10 HOH HOH B . T 5 HOH 13 213 28 HOH HOH B . T 5 HOH 14 214 56 HOH HOH B . T 5 HOH 15 215 70 HOH HOH B . T 5 HOH 16 216 16 HOH HOH B . T 5 HOH 17 217 74 HOH HOH B . T 5 HOH 18 218 29 HOH HOH B . T 5 HOH 19 219 39 HOH HOH B . T 5 HOH 20 220 42 HOH HOH B . T 5 HOH 21 221 64 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 126.748 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8K1E _cell.details ? _cell.formula_units_Z ? _cell.length_a 137.589 _cell.length_a_esd ? _cell.length_b 29.193 _cell.length_b_esd ? _cell.length_c 99.144 _cell.length_c_esd ? _cell.volume 319086.464 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8K1E _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8K1E _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.04 M Lithium chloride, 0.08 M Strontium chloride hexahydrate, 0.02 M Magnesium chloride hexahydrate, 28% v/v (+ / -)-2-Methyl-2,4-pentanediol, 0.012 M Spermine tetrahydrochloride ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-01-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL10U2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL10U2 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 44.14 _reflns.entry_id 8K1E _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.23 _reflns.d_resolution_low 79.44 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15793 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.904 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.23 _reflns_shell.d_res_low 2.29 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1034 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.371 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 90.3 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 54.49 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8K1E _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.23 _refine.ls_d_res_low 36.25 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15752 _refine.ls_number_reflns_R_free 786 _refine.ls_number_reflns_R_work 14966 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.90 _refine.ls_percent_reflns_R_free 4.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2380 _refine.ls_R_factor_R_free 0.2659 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2365 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.8310 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3434 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.23 _refine_hist.d_res_low 36.25 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 2483 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2385 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0024 ? 2660 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5909 ? 4142 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0289 ? 555 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0046 ? 111 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 9.7309 ? 1317 ? f_dihedral_angle_d ? ? # _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id d_2 _refine_ls_restr_ncs.pdbx_ens_id ens_1 _refine_ls_restr_ncs.rms_dev_position 1.38884466801 _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_type 'Torsion NCS' _refine_ls_restr_ncs.pdbx_asym_id A _refine_ls_restr_ncs.pdbx_auth_asym_id A _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? _refine_ls_restr_ncs.ncs_model_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.23 2.37 . . 125 2327 94.49 . . . . 0.3109 . . . . . . . . . . . 0.3520 'X-RAY DIFFRACTION' 2.37 2.55 . . 147 2472 99.92 . . . . 0.3079 . . . . . . . . . . . 0.3457 'X-RAY DIFFRACTION' 2.55 2.81 . . 114 2521 100.00 . . . . 0.3293 . . . . . . . . . . . 0.3251 'X-RAY DIFFRACTION' 2.81 3.22 . . 142 2504 99.89 . . . . 0.2441 . . . . . . . . . . . 0.2900 'X-RAY DIFFRACTION' 3.22 4.05 . . 129 2515 99.55 . . . . 0.1935 . . . . . . . . . . . 0.2273 'X-RAY DIFFRACTION' 4.05 36.25 . . 129 2627 99.46 . . . . 0.2164 . . . . . . . . . . . 0.2332 # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.matrix[1][1] 0.984298029865 _struct_ncs_oper.matrix[1][2] -0.0834249107225 _struct_ncs_oper.matrix[1][3] -0.155556011378 _struct_ncs_oper.matrix[2][1] -0.0833851126527 _struct_ncs_oper.matrix[2][2] -0.996494246123 _struct_ncs_oper.matrix[2][3] 0.00679267490115 _struct_ncs_oper.matrix[3][1] -0.155577348585 _struct_ncs_oper.matrix[3][2] 0.00628503900984 _struct_ncs_oper.matrix[3][3] -0.987803718808 _struct_ncs_oper.vector[1] 1.60369151293 _struct_ncs_oper.vector[2] -19.7481210298 _struct_ncs_oper.vector[3] 45.8146286233 _struct_ncs_oper.details ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;(chain "A" and (resid 1 through 24 or resid 28 through 58)) ; ens_1 d_2 ;chain "B" ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details ens_1 d_1 1 A G 1 . A U 6 . A G 1 A U 6 ? ? ens_1 d_2 1 B G 1 . B U 6 . B G 1 B U 6 ? ? # _struct_ncs_ens.id ens_1 _struct_ncs_ens.details ? # _struct_ncs_ens_gen.ens_id ens_1 _struct_ncs_ens_gen.dom_id_1 d_2 _struct_ncs_ens_gen.dom_id_2 d_1 _struct_ncs_ens_gen.oper_id 1 # _struct.entry_id 8K1E _struct.title 'Crystal structure of a human menRNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8K1E _struct_keywords.text 'MascRNA, tRNA-like, MALAT1, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 3 ? R N N 3 ? S N N 5 ? T N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8K1E _struct_ref.pdbx_db_accession 8K1E _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8K1E A 1 ? 58 ? 8K1E 1 ? 58 ? 1 58 2 1 8K1E B 1 ? 58 ? 8K1E 1 ? 58 ? 1 58 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 710 ? 1 MORE -27 ? 1 'SSA (A^2)' 18850 ? 2 'ABSA (A^2)' 2900 ? 2 MORE -92 ? 2 'SSA (A^2)' 36650 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,S 1 3 B,Q,R,T 2 1,2 A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,S 2 3,4 B,Q,R,T # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 78.2714787991 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 79.4415786259 3 'crystal symmetry operation' 3_556 x+1/2,y+1/2,z+1 1.0000000000 0.0000000000 0.0000000000 9.4769787991 0.0000000000 1.0000000000 0.0000000000 14.5965000000 0.0000000000 0.0000000000 1.0000000000 79.4415786259 4 'crystal symmetry operation' 4_555 -x+1/2,y+1/2,-z -1.0000000000 0.0000000000 0.0000000000 68.7945000000 0.0000000000 1.0000000000 0.0000000000 14.5965000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 11 "O3'" ? ? ? 1_555 K NA . NA ? ? A G 11 A NA 109 1_555 ? ? ? ? ? ? ? 2.267 ? ? metalc2 metalc ? ? A G 23 O6 ? ? ? 1_555 E K . K ? ? A G 23 A K 103 1_555 ? ? ? ? ? ? ? 2.881 ? ? metalc3 metalc ? ? A C 24 "O2'" ? ? ? 1_555 D K . K ? ? A C 24 A K 102 1_555 ? ? ? ? ? ? ? 2.643 ? ? metalc4 metalc ? ? A C 24 O2 ? ? ? 1_555 D K . K ? ? A C 24 A K 102 1_555 ? ? ? ? ? ? ? 2.795 ? ? metalc5 metalc ? ? A C 24 O2 ? ? ? 1_555 E K . K ? ? A C 24 A K 103 1_555 ? ? ? ? ? ? ? 2.810 ? ? metalc6 metalc ? ? A C 26 OP2 ? ? ? 1_555 D K . K ? ? A C 26 A K 102 1_555 ? ? ? ? ? ? ? 2.750 ? ? metalc7 metalc ? ? A G 28 O6 ? ? ? 1_555 E K . K ? ? A G 28 A K 103 1_555 ? ? ? ? ? ? ? 2.711 ? ? metalc8 metalc ? ? A C 35 OP1 ? ? ? 1_555 P MG . MG ? ? A C 35 A MG 114 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc9 metalc ? ? A U 41 O4 ? ? ? 1_555 O MG . MG ? ? A U 41 A MG 113 1_555 ? ? ? ? ? ? ? 2.788 ? ? metalc10 metalc ? ? A G 45 O6 ? ? ? 1_555 I NA . NA ? ? A G 45 A NA 107 1_555 ? ? ? ? ? ? ? 2.765 ? ? metalc11 metalc ? ? A G 54 O6 ? ? ? 1_555 F K . K ? ? A G 54 A K 104 1_555 ? ? ? ? ? ? ? 2.694 ? ? metalc12 metalc ? ? A U 55 O4 ? ? ? 1_555 F K . K ? ? A U 55 A K 104 1_555 ? ? ? ? ? ? ? 2.708 ? ? metalc13 metalc ? ? A U 55 O4 ? ? ? 1_555 G K . K ? ? A U 55 A K 105 1_555 ? ? ? ? ? ? ? 2.722 ? ? metalc14 metalc ? ? A U 58 "O3'" ? ? ? 1_555 L NA . NA ? ? A U 58 A NA 110 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc15 metalc ? ? D K . K ? ? ? 1_555 S HOH . O ? ? A K 102 A HOH 235 1_555 ? ? ? ? ? ? ? 2.803 ? ? metalc16 metalc ? ? F K . K ? ? ? 1_555 S HOH . O ? ? A K 104 A HOH 206 1_555 ? ? ? ? ? ? ? 2.685 ? ? metalc17 metalc ? ? G K . K ? ? ? 1_555 S HOH . O ? ? A K 105 A HOH 206 1_555 ? ? ? ? ? ? ? 3.256 ? ? metalc18 metalc ? ? L NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 110 A HOH 210 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc19 metalc ? ? M MG . MG ? ? ? 1_555 S HOH . O ? ? A MG 111 A HOH 219 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc20 metalc ? ? M MG . MG ? ? ? 1_555 S HOH . O ? ? A MG 111 A HOH 232 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc21 metalc ? ? M MG . MG ? ? ? 1_555 S HOH . O ? ? A MG 111 A HOH 241 1_555 ? ? ? ? ? ? ? 2.709 ? ? metalc22 metalc ? ? N MG . MG ? ? ? 1_555 S HOH . O ? ? A MG 112 A HOH 230 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc23 metalc ? ? O MG . MG ? ? ? 1_555 S HOH . O ? ? A MG 113 A HOH 254 1_555 ? ? ? ? ? ? ? 2.851 ? ? metalc24 metalc ? ? P MG . MG ? ? ? 1_555 S HOH . O ? ? A MG 114 A HOH 202 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc25 metalc ? ? B G 45 O6 ? ? ? 1_555 Q NA . NA ? ? B G 45 B NA 101 1_555 ? ? ? ? ? ? ? 2.997 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A U 58 O2 ? ? A G 1 A U 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog2 hydrog ? ? A G 1 O6 ? ? ? 1_555 A U 58 N3 ? ? A G 1 A U 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog3 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 57 O2 ? ? A G 2 A U 57 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog4 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 57 N3 ? ? A G 2 A U 57 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 56 N1 ? ? A C 3 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 56 O6 ? ? A C 3 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 56 N2 ? ? A C 3 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 A U 55 O2 ? ? A G 4 A U 55 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog9 hydrog ? ? A G 4 O6 ? ? ? 1_555 A U 55 N3 ? ? A G 4 A U 55 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog10 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 5 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 5 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 5 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 53 N1 ? ? A U 6 A A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 53 N6 ? ? A U 6 A A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 52 N3 ? ? A G 7 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 52 O2 ? ? A G 7 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 52 N4 ? ? A G 7 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 17 N3 ? ? A G 8 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 17 O2 ? ? A G 8 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 17 N4 ? ? A G 8 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N7 ? ? ? 1_555 A G 45 N2 ? ? A G 8 A G 45 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A G 45 N1 ? ? A G 8 A G 45 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 16 N1 ? ? A U 9 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 16 N6 ? ? A U 9 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 15 N3 ? ? A G 10 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 15 O2 ? ? A G 10 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 15 N4 ? ? A G 10 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 N1 ? ? ? 1_555 A U 46 O2 ? ? A G 11 A U 46 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog29 hydrog ? ? A G 13 N1 ? ? ? 1_555 A U 41 O2 ? ? A G 13 A U 41 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog30 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 42 N3 ? ? A G 14 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 14 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 14 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 17 N4 ? ? ? 1_555 A G 45 O6 ? ? A C 17 A G 45 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog34 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 34 N3 ? ? A G 18 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 34 O2 ? ? A G 18 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 34 N4 ? ? A G 18 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 19 N3 ? ? ? 1_555 A G 33 O6 ? ? A U 19 A G 33 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog38 hydrog ? ? A U 19 O2 ? ? ? 1_555 A G 33 N1 ? ? A U 19 A G 33 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog39 hydrog ? ? A C 20 N3 ? ? ? 1_555 A G 32 N1 ? ? A C 20 A G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 20 N4 ? ? ? 1_555 A G 32 O6 ? ? A C 20 A G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 20 O2 ? ? ? 1_555 A G 32 N2 ? ? A C 20 A G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 21 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 21 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 21 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A A 22 N1 ? ? ? 1_555 A U 30 N3 ? ? A A 22 A U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A A 22 N6 ? ? ? 1_555 A U 30 O4 ? ? A A 22 A U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 28 O6 ? ? A C 24 A G 28 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog51 hydrog ? ? A C 35 N3 ? ? ? 1_555 A G 51 N1 ? ? A C 35 A G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 35 N4 ? ? ? 1_555 A G 51 O6 ? ? A C 35 A G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 35 O2 ? ? ? 1_555 A G 51 N2 ? ? A C 35 A G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 36 N1 ? ? ? 1_555 A C 50 N3 ? ? A G 36 A C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 36 N2 ? ? ? 1_555 A C 50 O2 ? ? A G 36 A C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 36 O6 ? ? ? 1_555 A C 50 N4 ? ? A G 36 A C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 37 N1 ? ? ? 1_555 A C 49 N3 ? ? A G 37 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 37 N2 ? ? ? 1_555 A C 49 O2 ? ? A G 37 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 37 O6 ? ? ? 1_555 A C 49 N4 ? ? A G 37 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 38 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 38 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 38 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 39 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 39 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 39 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 39 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 39 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 39 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 40 N3 ? ? ? 1_555 A A 44 N7 ? ? A U 40 A A 44 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog67 hydrog ? ? A U 40 O2 ? ? ? 1_555 A A 44 N6 ? ? A U 40 A A 44 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog68 hydrog ? ? B G 1 N1 ? ? ? 1_555 B U 58 O2 ? ? B G 1 B U 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog69 hydrog ? ? B G 1 O6 ? ? ? 1_555 B U 58 N3 ? ? B G 1 B U 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog70 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 57 O2 ? ? B G 2 B U 57 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog71 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 57 N3 ? ? B G 2 B U 57 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 56 N1 ? ? B C 3 B G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 56 O6 ? ? B C 3 B G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 56 N2 ? ? B C 3 B G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B G 4 N1 ? ? ? 1_555 B U 55 O2 ? ? B G 4 B U 55 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog76 hydrog ? ? B G 4 O6 ? ? ? 1_555 B U 55 N3 ? ? B G 4 B U 55 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog77 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 54 N1 ? ? B C 5 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 54 O6 ? ? B C 5 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 54 N2 ? ? B C 5 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 53 N1 ? ? B U 6 B A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 53 N6 ? ? B U 6 B A 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 52 N3 ? ? B G 7 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 52 O2 ? ? B G 7 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 52 N4 ? ? B G 7 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B G 8 N1 ? ? ? 1_555 B C 17 N3 ? ? B G 8 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B G 8 N2 ? ? ? 1_555 B C 17 O2 ? ? B G 8 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B G 8 O6 ? ? ? 1_555 B C 17 N4 ? ? B G 8 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B G 8 N7 ? ? ? 1_555 B G 45 N2 ? ? B G 8 B G 45 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog89 hydrog ? ? B G 8 O6 ? ? ? 1_555 B G 45 N1 ? ? B G 8 B G 45 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog90 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 16 N1 ? ? B U 9 B A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 16 N6 ? ? B U 9 B A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 15 N3 ? ? B G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 15 O2 ? ? B G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 15 N4 ? ? B G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B G 11 N1 ? ? ? 1_555 B U 46 O2 ? ? B G 11 B U 46 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog96 hydrog ? ? B G 13 N1 ? ? ? 1_555 B U 41 O2 ? ? B G 13 B U 41 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog97 hydrog ? ? B G 14 N1 ? ? ? 1_555 B C 42 N3 ? ? B G 14 B C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B G 14 N2 ? ? ? 1_555 B C 42 O2 ? ? B G 14 B C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B G 14 O6 ? ? ? 1_555 B C 42 N4 ? ? B G 14 B C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B C 17 N4 ? ? ? 1_555 B G 45 O6 ? ? B C 17 B G 45 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog101 hydrog ? ? B G 18 N1 ? ? ? 1_555 B C 34 N3 ? ? B G 18 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B G 18 N2 ? ? ? 1_555 B C 34 O2 ? ? B G 18 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B G 18 O6 ? ? ? 1_555 B C 34 N4 ? ? B G 18 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B U 19 N3 ? ? ? 1_555 B G 33 O6 ? ? B U 19 B G 33 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog105 hydrog ? ? B U 19 O2 ? ? ? 1_555 B G 33 N1 ? ? B U 19 B G 33 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog106 hydrog ? ? B C 20 N3 ? ? ? 1_555 B G 32 N1 ? ? B C 20 B G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B C 20 N4 ? ? ? 1_555 B G 32 O6 ? ? B C 20 B G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B C 20 O2 ? ? ? 1_555 B G 32 N2 ? ? B C 20 B G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B C 21 N3 ? ? ? 1_555 B G 31 N1 ? ? B C 21 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B C 21 N4 ? ? ? 1_555 B G 31 O6 ? ? B C 21 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B C 21 O2 ? ? ? 1_555 B G 31 N2 ? ? B C 21 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B A 22 N1 ? ? ? 1_555 B U 30 N3 ? ? B A 22 B U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B A 22 N6 ? ? ? 1_555 B U 30 O4 ? ? B A 22 B U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B G 23 N1 ? ? ? 1_555 B C 29 N3 ? ? B G 23 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B G 23 N2 ? ? ? 1_555 B C 29 O2 ? ? B G 23 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B G 23 O6 ? ? ? 1_555 B C 29 N4 ? ? B G 23 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B C 24 N3 ? ? ? 1_555 B G 28 N1 ? ? B C 24 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B C 24 N4 ? ? ? 1_555 B G 28 O6 ? ? B C 24 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B C 24 O2 ? ? ? 1_555 B G 28 N2 ? ? B C 24 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B C 35 N3 ? ? ? 1_555 B G 51 N1 ? ? B C 35 B G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B C 35 N4 ? ? ? 1_555 B G 51 O6 ? ? B C 35 B G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B C 35 O2 ? ? ? 1_555 B G 51 N2 ? ? B C 35 B G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B G 36 N1 ? ? ? 1_555 B C 50 N3 ? ? B G 36 B C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B G 36 N2 ? ? ? 1_555 B C 50 O2 ? ? B G 36 B C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B G 36 O6 ? ? ? 1_555 B C 50 N4 ? ? B G 36 B C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 37 N1 ? ? ? 1_555 B C 49 N3 ? ? B G 37 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 37 N2 ? ? ? 1_555 B C 49 O2 ? ? B G 37 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B G 37 O6 ? ? ? 1_555 B C 49 N4 ? ? B G 37 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B G 38 N1 ? ? ? 1_555 B C 48 N3 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B G 38 N2 ? ? ? 1_555 B C 48 O2 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B G 38 O6 ? ? ? 1_555 B C 48 N4 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B G 39 N1 ? ? ? 1_555 B C 47 N3 ? ? B G 39 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B G 39 N2 ? ? ? 1_555 B C 47 O2 ? ? B G 39 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B G 39 O6 ? ? ? 1_555 B C 47 N4 ? ? B G 39 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B U 40 N3 ? ? ? 1_555 B A 44 N7 ? ? B U 40 B A 44 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog136 hydrog ? ? B U 40 O2 ? ? ? 1_555 B A 44 N6 ? ? B U 40 B A 44 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 23 ? A G 23 ? 1_555 K ? E K . ? A K 103 ? 1_555 O2 ? A C 24 ? A C 24 ? 1_555 103.0 ? 2 O6 ? A G 23 ? A G 23 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A G 28 ? A G 28 ? 1_555 76.4 ? 3 O2 ? A C 24 ? A C 24 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A G 28 ? A G 28 ? 1_555 116.4 ? 4 "O2'" ? A C 24 ? A C 24 ? 1_555 K ? D K . ? A K 102 ? 1_555 O2 ? A C 24 ? A C 24 ? 1_555 68.2 ? 5 "O2'" ? A C 24 ? A C 24 ? 1_555 K ? D K . ? A K 102 ? 1_555 OP2 ? A C 26 ? A C 26 ? 1_555 110.0 ? 6 O2 ? A C 24 ? A C 24 ? 1_555 K ? D K . ? A K 102 ? 1_555 OP2 ? A C 26 ? A C 26 ? 1_555 75.5 ? 7 "O2'" ? A C 24 ? A C 24 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? S HOH . ? A HOH 235 ? 1_555 69.3 ? 8 O2 ? A C 24 ? A C 24 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? S HOH . ? A HOH 235 ? 1_555 126.9 ? 9 OP2 ? A C 26 ? A C 26 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? S HOH . ? A HOH 235 ? 1_555 90.8 ? 10 OP1 ? A C 35 ? A C 35 ? 1_555 MG ? P MG . ? A MG 114 ? 1_555 O ? S HOH . ? A HOH 202 ? 1_555 86.3 ? 11 O4 ? A U 41 ? A U 41 ? 1_555 MG ? O MG . ? A MG 113 ? 1_555 O ? S HOH . ? A HOH 254 ? 1_555 77.5 ? 12 O6 ? A G 54 ? A G 54 ? 1_555 K ? F K . ? A K 104 ? 1_555 O4 ? A U 55 ? A U 55 ? 1_555 80.9 ? 13 O6 ? A G 54 ? A G 54 ? 1_555 K ? F K . ? A K 104 ? 1_555 O ? S HOH . ? A HOH 206 ? 1_555 87.7 ? 14 O4 ? A U 55 ? A U 55 ? 1_555 K ? F K . ? A K 104 ? 1_555 O ? S HOH . ? A HOH 206 ? 1_555 72.7 ? 15 O4 ? A U 55 ? A U 55 ? 1_555 K ? G K . ? A K 105 ? 1_555 O ? S HOH . ? A HOH 206 ? 1_555 63.9 ? 16 "O3'" ? A U 58 ? A U 58 ? 1_555 NA ? L NA . ? A NA 110 ? 1_555 O ? S HOH . ? A HOH 210 ? 1_555 60.6 ? 17 O ? S HOH . ? A HOH 219 ? 1_555 MG ? M MG . ? A MG 111 ? 1_555 O ? S HOH . ? A HOH 232 ? 1_555 133.3 ? 18 O ? S HOH . ? A HOH 219 ? 1_555 MG ? M MG . ? A MG 111 ? 1_555 O ? S HOH . ? A HOH 241 ? 1_555 77.2 ? 19 O ? S HOH . ? A HOH 232 ? 1_555 MG ? M MG . ? A MG 111 ? 1_555 O ? S HOH . ? A HOH 241 ? 1_555 70.5 ? # _pdbx_entry_details.entry_id 8K1E _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 211 ? ? O B HOH 218 ? ? 2.03 2 1 OP2 A G 1 ? ? O A HOH 201 ? ? 2.04 3 1 "O2'" B C 42 ? ? O B HOH 201 ? ? 2.09 4 1 OP1 A G 8 ? ? O A HOH 202 ? ? 2.12 5 1 O A HOH 246 ? ? O A HOH 260 ? ? 2.13 6 1 OP2 A G 51 ? ? O A HOH 203 ? ? 2.15 7 1 O B HOH 208 ? ? O B HOH 209 ? ? 2.18 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 23.3402672043 -4.06181970608 45.635360652 0.232185199217 ? -0.056388781326 ? -0.0499104117921 ? 0.389699579534 ? 0.015023885394 ? 0.414509777361 ? 2.05207118536 ? 1.07200027243 ? -0.179209663301 ? 0.800919722737 ? 0.26199784511 ? 1.70124472829 ? 0.293476123859 ? -0.627941746412 ? -0.319982129074 ? 0.122723836999 ? -0.273944449228 ? -0.338654834462 ? -0.122088301763 ? 0.0377245099442 ? -0.0243623068985 ? 2 'X-RAY DIFFRACTION' ? refined 48.7954275207 8.26493491104 48.9682211165 0.344330019478 ? -0.102929311785 ? 0.100641819145 ? 0.555254710479 ? -0.0930466306205 ? 0.653262004923 ? 2.56842412538 ? -0.461424070024 ? -0.672654742839 ? 0.0975586298926 ? 0.033778958532 ? 0.4420239153 ? 0.195026420739 ? -0.120290935814 ? 0.125375819221 ? 0.0369126489489 ? -0.442476055806 ? 0.376144364382 ? 0.488179344085 ? -0.627407826421 ? 0.237023814272 ? 3 'X-RAY DIFFRACTION' ? refined 35.2651385872 4.82143514517 49.1785780021 0.316722016223 ? -0.0806137553473 ? 0.0612113064234 ? 0.590879570093 ? -0.0678987491828 ? 0.493850670159 ? 2.14110988157 ? -0.389652532433 ? 0.346714376461 ? 0.357265672603 ? 0.458315020814 ? 0.906184668336 ? 0.0317405337792 ? -1.18487980014 ? -0.00174111057763 ? 0.0619143385422 ? 0.106482419717 ? -0.20632182985 ? 0.0971040462609 ? 0.0683339343204 ? 0.0093021166311 ? 4 'X-RAY DIFFRACTION' ? refined 15.2114284141 1.62234839546 40.9407343951 0.189542656032 ? -0.0335972763385 ? 0.0350446758433 ? 0.294436524174 ? -0.0414697989945 ? 0.289940672623 ? 2.54208132926 ? 0.406454302211 ? 0.81344251498 ? 1.41009057892 ? 0.0282766000736 ? 1.35452558764 ? 0.197267740409 ? -0.36985244726 ? 0.187245226002 ? 0.0991272991407 ? -0.205944401919 ? -0.0624426816235 ? 0.060903701869 ? -0.207930575973 ? 0.0298435488114 ? 5 'X-RAY DIFFRACTION' ? refined 13.1047665624 -15.921808688 -0.964537590848 0.758059417312 ? 0.00288399169245 ? 0.0493153609029 ? 0.452462077485 ? 0.00515204992705 ? 0.412050229639 ? 1.8307345022 ? -0.844259857811 ? -1.02624287718 ? 0.753600330535 ? 2.0029831302 ? 3.36176396512 ? 0.24580892002 ? 0.295982206093 ? 0.462839128206 ? -0.247317259473 ? 0.0992840275847 ? -0.416499327145 ? -0.483567059743 ? -0.363205189284 ? -0.310959011636 ? 6 'X-RAY DIFFRACTION' ? refined 32.092018389 -26.907030685 -9.99743843465 1.16958969701 ? 0.448603375669 ? -0.0275068952815 ? 1.9640926605 ? -0.0868196121699 ? 1.09823788614 ? 0.844660397562 ? -1.10358623133 ? 0.528541066385 ? 3.02810462875 ? 0.244828187759 ? 0.793994732044 ? -0.659861253521 ? -0.616420392306 ? -0.470642198586 ? 0.810738923743 ? 1.01904275009 ? -0.820344214223 ? 1.26886505918 ? 1.92199758957 ? -0.184175083101 ? 7 'X-RAY DIFFRACTION' ? refined 10.7929169021 -22.808215522 3.1655132872 0.828481613577 ? 0.00555525549437 ? -0.033780074639 ? 0.359179647901 ? -0.0350890508267 ? 0.410982656408 ? 1.36735402385 ? -0.179769401732 ? -1.07749477674 ? 0.561203708873 ? 0.48045579598 ? 1.28399082374 ? -0.0146789857194 ? 0.250983225909 ? -0.113348986857 ? 0.00109628759991 ? 0.0519401744265 ? -0.302227026839 ? 0.0399207372416 ? -0.289791754815 ? -0.0167158693939 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 1 ? A ? A 21 ? ? ;chain 'A' and (resid 1 through 21 ) ; 2 'X-RAY DIFFRACTION' 2 A ? A 22 ? A ? A 26 ? ? ;chain 'A' and (resid 22 through 26 ) ; 3 'X-RAY DIFFRACTION' 3 A ? A 27 ? A ? A 36 ? ? ;chain 'A' and (resid 27 through 36 ) ; 4 'X-RAY DIFFRACTION' 4 A ? A 37 ? A ? A 58 ? ? ;chain 'A' and (resid 37 through 58 ) ; 5 'X-RAY DIFFRACTION' 5 B ? B 1 ? B ? B 16 ? ? ;chain 'B' and (resid 1 through 16 ) ; 6 'X-RAY DIFFRACTION' 6 B ? B 17 ? B ? B 34 ? ? ;chain 'B' and (resid 17 through 34 ) ; 7 'X-RAY DIFFRACTION' 7 B ? B 35 ? B ? B 58 ? ? ;chain 'B' and (resid 35 through 58 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A U 12 ? A U 12 2 1 Y 1 B U 12 ? B U 12 3 1 Y 1 B A 25 ? B A 25 4 1 Y 1 B C 26 ? B C 26 5 1 Y 1 B G 27 ? B G 27 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 K K K N N 114 MG MG MG N N 115 NA NA NA N N 116 U OP3 O N N 117 U P P N N 118 U OP1 O N N 119 U OP2 O N N 120 U "O5'" O N N 121 U "C5'" C N N 122 U "C4'" C N R 123 U "O4'" O N N 124 U "C3'" C N S 125 U "O3'" O N N 126 U "C2'" C N R 127 U "O2'" O N N 128 U "C1'" C N R 129 U N1 N N N 130 U C2 C N N 131 U O2 O N N 132 U N3 N N N 133 U C4 C N N 134 U O4 O N N 135 U C5 C N N 136 U C6 C N N 137 U HOP3 H N N 138 U HOP2 H N N 139 U "H5'" H N N 140 U "H5''" H N N 141 U "H4'" H N N 142 U "H3'" H N N 143 U "HO3'" H N N 144 U "H2'" H N N 145 U "HO2'" H N N 146 U "H1'" H N N 147 U H3 H N N 148 U H5 H N N 149 U H6 H N N 150 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8K1E 'double helix' 8K1E 'a-form double helix' 8K1E 'parallel strands' 8K1E 'hairpin loop' 8K1E 'bulge loop' 8K1E 'mismatched base pair' 8K1E 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 28 1_555 A C 24 1_555 -0.133 -2.457 -1.021 20.076 -23.658 153.696 1 A_G28:C24_A A 28 ? A 24 ? ? ? 1 A C 29 1_555 A G 23 1_555 0.115 -0.111 0.414 -10.508 -6.096 -2.270 2 A_C29:G23_A A 29 ? A 23 ? 19 1 1 A U 30 1_555 A A 22 1_555 -0.041 -0.114 0.526 -1.286 -1.598 -2.440 3 A_U30:A22_A A 30 ? A 22 ? 20 1 1 A G 31 1_555 A C 21 1_555 -0.193 -0.152 0.371 1.543 -9.361 -0.882 4 A_G31:C21_A A 31 ? A 21 ? 19 1 1 A G 32 1_555 A C 20 1_555 -0.164 -0.142 0.397 -3.271 -8.624 -0.619 5 A_G32:C20_A A 32 ? A 20 ? 19 1 1 A G 33 1_555 A U 19 1_555 -2.301 -0.488 0.096 -2.129 -8.137 -1.487 6 A_G33:U19_A A 33 ? A 19 ? 28 1 1 A C 34 1_555 A G 18 1_555 0.208 -0.189 0.049 6.610 -6.337 0.238 7 A_C34:G18_A A 34 ? A 18 ? 19 1 1 A G 8 1_555 A C 17 1_555 -0.202 -0.149 -0.253 4.359 -7.983 3.244 8 A_G8:C17_A A 8 ? A 17 ? 19 1 1 A U 9 1_555 A A 16 1_555 0.032 -0.119 -0.041 -1.867 -4.915 10.498 9 A_U9:A16_A A 9 ? A 16 ? 20 1 1 A G 10 1_555 A C 15 1_555 -0.152 -0.136 -0.642 -11.386 -3.095 0.992 10 A_G10:C15_A A 10 ? A 15 ? 19 1 1 A G 11 1_555 A U 46 1_555 -0.444 5.084 -0.210 -27.689 -6.283 106.975 11 A_G11:U46_A A 11 ? A 46 ? ? 2 1 A G 13 1_555 A U 41 1_555 -0.445 5.582 -0.553 -21.642 -7.297 91.438 12 A_G13:U41_A A 13 ? A 41 ? ? 2 1 A A 44 1_555 A U 40 1_555 -4.167 -1.797 0.467 1.371 9.643 -101.658 13 A_A44:U40_A A 44 ? A 40 ? 24 4 1 A C 47 1_555 A G 39 1_555 0.196 -0.107 0.157 8.447 -7.219 1.495 14 A_C47:G39_A A 47 ? A 39 ? 19 1 1 A C 48 1_555 A G 38 1_555 0.222 -0.145 -0.040 0.255 -7.702 1.287 15 A_C48:G38_A A 48 ? A 38 ? 19 1 1 A C 49 1_555 A G 37 1_555 0.587 -0.150 -0.052 2.396 -5.202 2.774 16 A_C49:G37_A A 49 ? A 37 ? 19 1 1 A C 50 1_555 A G 36 1_555 0.266 -0.157 0.060 8.309 -10.250 1.306 17 A_C50:G36_A A 50 ? A 36 ? 19 1 1 A G 51 1_555 A C 35 1_555 -0.222 -0.120 -0.072 -1.937 -8.541 1.601 18 A_G51:C35_A A 51 ? A 35 ? 19 1 1 A C 52 1_555 A G 7 1_555 0.238 -0.131 0.218 -5.198 -8.126 -1.010 19 A_C52:G7_A A 52 ? A 7 ? 19 1 1 A A 53 1_555 A U 6 1_555 0.013 -0.112 0.295 3.194 -10.194 -1.067 20 A_A53:U6_A A 53 ? A 6 ? 20 1 1 A G 54 1_555 A C 5 1_555 -0.116 -0.158 0.383 4.389 -10.991 0.188 21 A_G54:C5_A A 54 ? A 5 ? 19 1 1 A U 55 1_555 A G 4 1_555 2.327 -0.479 0.160 -0.350 -9.889 -1.381 22 A_U55:G4_A A 55 ? A 4 ? 28 1 1 A G 56 1_555 A C 3 1_555 -0.173 -0.181 0.246 0.320 -11.651 -0.344 23 A_G56:C3_A A 56 ? A 3 ? 19 1 1 A U 57 1_555 A G 2 1_555 0.207 -0.106 0.150 1.075 -11.008 -1.502 24 A_U57:G2_A A 57 ? A 2 ? 28 1 1 A U 58 1_555 A G 1 1_555 2.256 -0.555 0.115 0.160 -8.669 -3.059 25 A_U58:G1_A A 58 ? A 1 ? 28 1 1 B G 1 1_555 B U 58 1_555 -2.510 -0.594 0.093 -2.730 -11.617 -2.452 26 B_G1:U58_B B 1 ? B 58 ? 28 1 1 B G 2 1_555 B U 57 1_555 -0.184 -0.123 0.033 -4.315 -11.327 -1.516 27 B_G2:U57_B B 2 ? B 57 ? 28 1 1 B C 3 1_555 B G 56 1_555 0.162 -0.191 0.296 -3.474 -6.633 -2.020 28 B_C3:G56_B B 3 ? B 56 ? 19 1 1 B G 4 1_555 B U 55 1_555 -2.167 -0.362 0.191 -0.846 -10.063 -0.626 29 B_G4:U55_B B 4 ? B 55 ? 28 1 1 B C 5 1_555 B G 54 1_555 0.170 -0.139 0.269 -2.647 -9.602 0.677 30 B_C5:G54_B B 5 ? B 54 ? 19 1 1 B U 6 1_555 B A 53 1_555 0.008 -0.167 0.403 -3.633 -10.153 -0.031 31 B_U6:A53_B B 6 ? B 53 ? 20 1 1 B G 7 1_555 B C 52 1_555 -0.180 -0.189 0.476 7.598 -6.040 -0.788 32 B_G7:C52_B B 7 ? B 52 ? 19 1 1 B C 35 1_555 B G 51 1_555 0.139 -0.090 0.194 2.133 -5.767 0.531 33 B_C35:G51_B B 35 ? B 51 ? 19 1 1 B G 36 1_555 B C 50 1_555 -0.198 -0.138 -0.380 -7.268 -3.826 -0.609 34 B_G36:C50_B B 36 ? B 50 ? 19 1 1 B G 37 1_555 B C 49 1_555 -0.360 -0.148 -0.022 -2.373 -1.683 1.971 35 B_G37:C49_B B 37 ? B 49 ? 19 1 1 B G 38 1_555 B C 48 1_555 -0.175 -0.151 -0.048 -0.374 -3.943 1.259 36 B_G38:C48_B B 38 ? B 48 ? 19 1 1 B G 39 1_555 B C 47 1_555 -0.179 -0.129 0.166 -8.668 -5.149 1.374 37 B_G39:C47_B B 39 ? B 47 ? 19 1 1 B U 40 1_555 B A 44 1_555 4.236 -2.005 0.684 -2.354 10.335 -98.775 38 B_U40:A44_B B 40 ? B 44 ? 24 4 1 B U 41 1_555 B G 13 1_555 0.670 -5.628 0.478 22.347 7.276 -89.630 39 B_U41:G13_B B 41 ? B 13 ? ? 6 1 A G 14 1_555 A C 42 1_555 -0.185 -0.154 0.134 -11.879 -8.256 -0.402 40 A_G14:C42_A A 14 ? A 42 ? 19 1 1 B G 28 1_555 B C 24 1_555 -0.186 -0.255 0.674 -3.270 -2.011 -0.960 41 B_G28:C24_B B 28 ? B 24 ? 19 1 1 B C 29 1_555 B G 23 1_555 0.157 -0.180 0.493 -2.054 0.060 1.970 42 B_C29:G23_B B 29 ? B 23 ? 19 1 1 B U 30 1_555 B A 22 1_555 -0.060 -0.104 0.180 1.657 1.431 1.841 43 B_U30:A22_B B 30 ? B 22 ? 20 1 1 B G 31 1_555 B C 21 1_555 -0.202 -0.127 0.012 0.231 -5.946 1.461 44 B_G31:C21_B B 31 ? B 21 ? 19 1 1 B G 32 1_555 B C 20 1_555 -0.185 -0.117 0.043 -2.859 -4.976 1.920 45 B_G32:C20_B B 32 ? B 20 ? 19 1 1 B G 33 1_555 B U 19 1_555 -1.951 -0.452 -0.246 -0.595 -3.274 -0.698 46 B_G33:U19_B B 33 ? B 19 ? 28 1 1 B C 34 1_555 B G 18 1_555 0.234 -0.105 -0.210 6.216 -5.564 1.951 47 B_C34:G18_B B 34 ? B 18 ? 19 1 1 B G 8 1_555 B C 17 1_555 -0.248 -0.233 -0.736 1.112 -7.649 3.422 48 B_G8:C17_B B 8 ? B 17 ? 19 1 1 B U 9 1_555 B A 16 1_555 0.014 -0.130 -0.295 -2.023 -1.684 8.004 49 B_U9:A16_B B 9 ? B 16 ? 20 1 1 B G 10 1_555 B C 15 1_555 -0.165 -0.096 -0.224 -6.151 3.816 2.688 50 B_G10:C15_B B 10 ? B 15 ? 19 1 1 B G 11 1_555 B U 46 1_555 -0.598 4.681 -0.309 -31.499 -5.346 106.443 51 B_G11:U46_B B 11 ? B 46 ? ? 2 1 B G 14 1_555 B C 42 1_555 -0.174 -0.135 0.080 -13.883 -9.190 0.060 52 B_G14:C42_B B 14 ? B 42 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 28 1_555 A C 24 1_555 A C 29 1_555 A G 23 1_555 0.463 -0.101 3.054 -11.249 -7.005 126.885 -0.005 -0.342 3.030 -3.912 6.281 127.267 1 AA_G28C29:G23C24_AA A 28 ? A 24 ? A 29 ? A 23 ? 1 A C 29 1_555 A G 23 1_555 A U 30 1_555 A A 22 1_555 -0.161 -1.258 3.053 -3.346 5.708 31.799 -3.154 -0.243 2.793 10.279 6.026 32.462 2 AA_C29U30:A22G23_AA A 29 ? A 23 ? A 30 ? A 22 ? 1 A U 30 1_555 A A 22 1_555 A G 31 1_555 A C 21 1_555 0.510 -1.680 2.740 1.953 12.463 33.533 -4.091 -0.619 2.033 20.713 -3.246 35.764 3 AA_U30G31:C21A22_AA A 30 ? A 22 ? A 31 ? A 21 ? 1 A G 31 1_555 A C 21 1_555 A G 32 1_555 A C 20 1_555 0.007 -2.093 3.176 -0.109 4.699 33.738 -4.268 -0.028 2.867 8.047 0.186 34.054 4 AA_G31G32:C20C21_AA A 31 ? A 21 ? A 32 ? A 20 ? 1 A G 32 1_555 A C 20 1_555 A G 33 1_555 A U 19 1_555 0.351 -2.306 2.843 2.037 12.426 22.008 -7.762 -0.392 1.386 29.633 -4.859 25.317 5 AA_G32G33:U19C20_AA A 32 ? A 20 ? A 33 ? A 19 ? 1 A G 33 1_555 A U 19 1_555 A C 34 1_555 A G 18 1_555 -0.125 -1.228 3.208 0.800 4.005 43.276 -2.032 0.243 3.085 5.415 -1.082 43.460 6 AA_G33C34:G18U19_AA A 33 ? A 19 ? A 34 ? A 18 ? 1 A C 34 1_555 A G 18 1_555 A G 8 1_555 A C 17 1_555 -0.927 -1.248 3.042 1.827 13.495 39.103 -3.023 1.484 2.454 19.458 -2.634 41.319 7 AA_C34G8:C17G18_AA A 34 ? A 18 ? A 8 ? A 17 ? 1 A G 8 1_555 A C 17 1_555 A U 9 1_555 A A 16 1_555 0.814 -2.389 3.367 -1.185 3.837 32.800 -4.841 -1.628 3.045 6.763 2.089 33.038 8 AA_G8U9:A16C17_AA A 8 ? A 17 ? A 9 ? A 16 ? 1 A U 9 1_555 A A 16 1_555 A G 10 1_555 A C 15 1_555 -0.812 -2.136 3.436 7.152 10.637 30.595 -5.398 2.534 2.341 19.137 -12.869 33.113 9 AA_U9G10:C15A16_AA A 9 ? A 16 ? A 10 ? A 15 ? 1 A G 10 1_555 A C 15 1_555 A G 11 1_555 A U 46 1_555 2.332 -1.887 3.022 10.306 2.831 -8.863 5.955 16.410 0.589 -13.362 48.641 -13.876 10 AA_G10G11:U46C15_AA A 10 ? A 15 ? A 11 ? A 46 ? 1 A G 13 1_555 A U 41 1_555 A A 44 1_555 A U 40 1_555 -1.757 -2.951 -2.765 161.453 -62.023 75.238 -1.911 -0.249 -2.151 -31.503 -82.006 174.423 11 AA_G13A44:U40U41_AA A 13 ? A 41 ? A 44 ? A 40 ? 1 A A 44 1_555 A U 40 1_555 A C 47 1_555 A G 39 1_555 2.552 -2.119 3.196 -2.306 1.197 86.460 -1.572 -1.911 3.117 0.874 1.683 86.492 12 AA_A44C47:G39U40_AA A 44 ? A 40 ? A 47 ? A 39 ? 1 A C 47 1_555 A G 39 1_555 A C 48 1_555 A G 38 1_555 -0.570 -2.374 3.317 -1.186 4.745 31.322 -5.189 0.833 2.954 8.722 2.179 31.692 13 AA_C47C48:G38G39_AA A 47 ? A 39 ? A 48 ? A 38 ? 1 A C 48 1_555 A G 38 1_555 A C 49 1_555 A G 37 1_555 -0.353 -1.634 3.171 -0.175 3.527 29.857 -3.831 0.647 2.965 6.814 0.338 30.060 14 AA_C48C49:G37G38_AA A 48 ? A 38 ? A 49 ? A 37 ? 1 A C 49 1_555 A G 37 1_555 A C 50 1_555 A G 36 1_555 0.211 -1.394 3.008 2.163 7.079 33.369 -3.358 -0.058 2.673 12.144 -3.710 34.157 15 AA_C49C50:G36G37_AA A 49 ? A 37 ? A 50 ? A 36 ? 1 A C 50 1_555 A G 36 1_555 A G 51 1_555 A C 35 1_555 0.937 -2.125 3.346 1.688 10.169 29.260 -5.794 -1.453 2.532 19.387 -3.219 30.986 16 AA_C50G51:C35G36_AA A 50 ? A 36 ? A 51 ? A 35 ? 1 A G 51 1_555 A C 35 1_555 A C 52 1_555 A G 7 1_555 0.903 -1.307 3.170 -0.787 2.917 48.854 -1.788 -1.147 3.078 3.523 0.950 48.941 17 AA_G51C52:G7C35_AA A 51 ? A 35 ? A 52 ? A 7 ? 1 A C 52 1_555 A G 7 1_555 A A 53 1_555 A U 6 1_555 0.033 -1.052 2.924 -0.502 17.050 34.741 -3.333 -0.102 2.191 26.659 0.785 38.587 18 AA_C52A53:U6G7_AA A 52 ? A 7 ? A 53 ? A 6 ? 1 A A 53 1_555 A U 6 1_555 A G 54 1_555 A C 5 1_555 0.615 -1.557 3.030 1.205 8.037 29.509 -4.335 -0.959 2.549 15.414 -2.312 30.583 19 AA_A53G54:C5U6_AA A 53 ? A 6 ? A 54 ? A 5 ? 1 A G 54 1_555 A C 5 1_555 A U 55 1_555 A G 4 1_555 0.412 -1.369 3.343 5.089 5.906 43.536 -2.373 -0.071 3.166 7.888 -6.796 44.195 20 AA_G54U55:G4C5_AA A 54 ? A 5 ? A 55 ? A 4 ? 1 A U 55 1_555 A G 4 1_555 A G 56 1_555 A C 3 1_555 -0.485 -1.907 2.815 2.393 15.172 22.787 -6.584 1.428 1.264 33.898 -5.347 27.423 21 AA_U55G56:C3G4_AA A 55 ? A 4 ? A 56 ? A 3 ? 1 A G 56 1_555 A C 3 1_555 A U 57 1_555 A G 2 1_555 0.124 -1.258 3.260 1.711 4.155 34.089 -2.761 0.051 3.093 7.049 -2.903 34.375 22 AA_G56U57:G2C3_AA A 56 ? A 3 ? A 57 ? A 2 ? 1 A U 57 1_555 A G 2 1_555 A U 58 1_555 A G 1 1_555 0.365 -1.212 3.292 3.620 4.216 42.329 -2.086 -0.140 3.181 5.809 -4.987 42.676 23 AA_U57U58:G1G2_AA A 57 ? A 2 ? A 58 ? A 1 ? 1 A U 58 1_555 A G 1 1_555 B G 1 1_555 B U 58 1_555 0.021 -4.660 3.153 0.781 13.022 -38.504 4.987 0.134 4.437 -19.091 1.145 -40.574 24 AB_U58G1:U58G1_BA A 58 ? A 1 ? B 1 ? B 58 ? 1 B G 1 1_555 B U 58 1_555 B G 2 1_555 B U 57 1_555 -0.515 -1.173 3.296 -4.330 5.520 43.449 -2.084 0.281 3.166 7.399 5.804 43.985 25 BB_G1G2:U57U58_BB B 1 ? B 58 ? B 2 ? B 57 ? 1 B G 2 1_555 B U 57 1_555 B C 3 1_555 B G 56 1_555 -0.250 -1.167 3.313 -2.587 7.089 33.236 -3.099 0.023 3.018 12.199 4.451 34.059 26 BB_G2C3:G56U57_BB B 2 ? B 57 ? B 3 ? B 56 ? 1 B C 3 1_555 B G 56 1_555 B G 4 1_555 B U 55 1_555 1.274 -1.952 2.823 1.308 15.903 22.247 -6.857 -2.472 1.245 35.876 -2.950 27.319 27 BB_C3G4:U55G56_BB B 3 ? B 56 ? B 4 ? B 55 ? 1 B G 4 1_555 B U 55 1_555 B C 5 1_555 B G 54 1_555 -0.235 -1.408 3.296 -2.424 5.203 41.780 -2.486 0.081 3.115 7.254 3.379 42.155 28 BB_G4C5:G54U55_BB B 4 ? B 55 ? B 5 ? B 54 ? 1 B C 5 1_555 B G 54 1_555 B U 6 1_555 B A 53 1_555 -0.150 -1.593 3.193 -0.586 4.495 30.158 -3.873 0.175 2.933 8.577 1.118 30.489 29 BB_C5U6:A53G54_BB B 5 ? B 54 ? B 6 ? B 53 ? 1 B U 6 1_555 B A 53 1_555 B G 7 1_555 B C 52 1_555 -0.158 -1.363 2.696 -0.069 12.456 33.439 -3.593 0.250 2.074 20.773 0.116 35.621 30 BB_U6G7:C52A53_BB B 6 ? B 53 ? B 7 ? B 52 ? 1 B G 7 1_555 B C 52 1_555 B C 35 1_555 B G 51 1_555 -1.604 -1.272 3.337 -1.055 2.868 50.388 -1.698 1.805 3.296 3.365 1.238 50.475 31 BB_G7C35:G51C52_BB B 7 ? B 52 ? B 35 ? B 51 ? 1 B C 35 1_555 B G 51 1_555 B G 36 1_555 B C 50 1_555 -0.945 -2.111 3.238 -0.115 14.043 29.368 -5.867 1.673 2.045 25.914 0.213 32.486 32 BB_C35G36:C50G51_BB B 35 ? B 51 ? B 36 ? B 50 ? 1 B G 36 1_555 B C 50 1_555 B G 37 1_555 B C 49 1_555 0.138 -1.767 3.108 -2.534 6.368 31.917 -4.137 -0.641 2.696 11.416 4.543 32.626 33 BB_G36G37:C49C50_BB B 36 ? B 50 ? B 37 ? B 49 ? 1 B G 37 1_555 B C 49 1_555 B G 38 1_555 B C 48 1_555 0.097 -1.674 3.201 -0.866 3.362 28.818 -4.043 -0.375 2.986 6.723 1.733 29.022 34 BB_G37G38:C48C49_BB B 37 ? B 49 ? B 38 ? B 48 ? 1 B G 38 1_555 B C 48 1_555 B G 39 1_555 B C 47 1_555 0.548 -2.036 3.399 0.472 1.805 33.078 -3.883 -0.881 3.294 3.167 -0.828 33.129 35 BB_G38G39:C47C48_BB B 38 ? B 48 ? B 39 ? B 47 ? 1 B G 39 1_555 B C 47 1_555 B U 40 1_555 B A 44 1_555 -2.537 -2.189 3.187 0.650 1.053 87.283 -1.608 1.852 3.150 0.763 -0.471 87.290 36 BB_G39U40:A44C47_BB B 39 ? B 47 ? B 40 ? B 44 ? 1 B U 40 1_555 B A 44 1_555 B U 41 1_555 B G 13 1_555 1.907 -1.663 3.193 5.976 2.995 42.604 -2.558 -2.008 3.299 4.092 -8.164 43.101 37 BB_U40U41:G13A44_BB B 40 ? B 44 ? B 41 ? B 13 ? 1 B G 28 1_555 B C 24 1_555 B C 29 1_555 B G 23 1_555 0.051 -1.546 3.330 -0.939 1.512 33.782 -2.903 -0.240 3.257 2.600 1.615 33.827 38 BB_G28C29:G23C24_BB B 28 ? B 24 ? B 29 ? B 23 ? 1 B C 29 1_555 B G 23 1_555 B U 30 1_555 B A 22 1_555 -0.225 -1.621 3.216 1.751 4.178 29.848 -3.918 0.769 2.949 8.052 -3.374 30.182 39 BB_C29U30:A22G23_BB B 29 ? B 23 ? B 30 ? B 22 ? 1 B U 30 1_555 B A 22 1_555 B G 31 1_555 B C 21 1_555 0.378 -1.708 3.122 4.177 10.838 31.533 -4.523 -0.051 2.447 19.149 -7.381 33.553 40 BB_U30G31:C21A22_BB B 30 ? B 22 ? B 31 ? B 21 ? 1 B G 31 1_555 B C 21 1_555 B G 32 1_555 B C 20 1_555 0.153 -2.115 3.182 1.545 7.885 32.389 -4.865 -0.036 2.613 13.870 -2.718 33.345 41 BB_G31G32:C20C21_BB B 31 ? B 21 ? B 32 ? B 20 ? 1 B G 32 1_555 B C 20 1_555 B G 33 1_555 B U 19 1_555 0.128 -2.239 3.022 2.819 9.988 23.413 -7.300 0.344 1.922 23.206 -6.550 25.581 42 BB_G32G33:U19C20_BB B 32 ? B 20 ? B 33 ? B 19 ? 1 B G 33 1_555 B U 19 1_555 B C 34 1_555 B G 18 1_555 -0.085 -1.179 3.199 2.034 2.382 42.832 -1.839 0.311 3.126 3.256 -2.780 42.941 43 BB_G33C34:G18U19_BB B 33 ? B 19 ? B 34 ? B 18 ? 1 B C 34 1_555 B G 18 1_555 B G 8 1_555 B C 17 1_555 -1.549 -1.191 3.212 6.212 17.114 44.478 -2.681 2.349 2.401 21.569 -7.830 47.884 44 BB_C34G8:C17G18_BB B 34 ? B 18 ? B 8 ? B 17 ? 1 B G 8 1_555 B C 17 1_555 B U 9 1_555 B A 16 1_555 0.582 -2.164 3.365 -2.095 3.847 32.794 -4.442 -1.371 3.057 6.776 3.689 33.077 45 BB_G8U9:A16C17_BB B 8 ? B 17 ? B 9 ? B 16 ? 1 B U 9 1_555 B A 16 1_555 B G 10 1_555 B C 15 1_555 -0.557 -2.020 3.401 2.173 10.699 28.637 -5.788 1.453 2.457 20.703 -4.205 30.607 46 BB_U9G10:C15A16_BB B 9 ? B 16 ? B 10 ? B 15 ? 1 B G 10 1_555 B C 15 1_555 B G 11 1_555 B U 46 1_555 2.246 -2.083 3.108 12.082 8.582 -12.167 2.485 12.065 1.498 -29.433 41.433 -19.153 47 BB_G10G11:U46C15_BB B 10 ? B 15 ? B 11 ? B 46 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 32171191 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8K0Y _pdbx_initial_refinement_model.details 'Crystal structure of a medaka mascRNA U23G' # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 8K1E _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.007268 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005427 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.034255 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012588 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 16.37977 2.54835 ? ? 4.54127 84.28225 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #