HEADER OXIDOREDUCTASE 10-JUL-23 8K1G TITLE CRYSTAL STRUCTURE OF ETHYLENE GLYCOL-BOUND GLYCEROL DEHYDROGENASE FROM TITLE 2 KLEBSIELLA PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROL DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.1.1.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: GLDA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCEROL DEHYDROGENASE, ETHYLENE GLYCOL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR W.KANG REVDAT 1 29-MAY-24 8K1G 0 JRNL AUTH G.S.KO,T.Q.NGUYEN,S.KHO,W.KANG JRNL TITL CRYSTAL STRUCTURE OF GLYCEROL DEHYDROGENASE FROM KLEBSIELLA JRNL TITL 2 PNEUMONIAE JRNL REF J. KOREAN CHEM. SOC. V. 68 32 2024 JRNL DOI 10.5012/JKCS.2024.68.1.32 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 40006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1976 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5000 - 5.0400 1.00 2915 131 0.1559 0.1919 REMARK 3 2 5.0400 - 4.0000 1.00 2765 156 0.1432 0.1402 REMARK 3 3 4.0000 - 3.5000 1.00 2742 150 0.1642 0.1754 REMARK 3 4 3.5000 - 3.1800 1.00 2718 163 0.1834 0.2058 REMARK 3 5 3.1800 - 2.9500 1.00 2703 148 0.2113 0.2345 REMARK 3 6 2.9500 - 2.7800 1.00 2719 134 0.2027 0.2482 REMARK 3 7 2.7800 - 2.6400 1.00 2687 146 0.1961 0.2187 REMARK 3 8 2.6400 - 2.5200 1.00 2696 141 0.2074 0.2298 REMARK 3 9 2.5200 - 2.4200 1.00 2699 141 0.2202 0.2469 REMARK 3 10 2.4200 - 2.3400 1.00 2696 135 0.2134 0.2422 REMARK 3 11 2.3400 - 2.2700 1.00 2678 140 0.2185 0.2835 REMARK 3 12 2.2700 - 2.2000 1.00 2691 146 0.2415 0.2445 REMARK 3 13 2.2000 - 2.1500 1.00 2675 132 0.2543 0.2972 REMARK 3 14 2.1500 - 2.0900 0.98 2646 113 0.2724 0.3002 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.209 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.552 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2767 REMARK 3 ANGLE : 0.891 3754 REMARK 3 CHIRALITY : 0.051 438 REMARK 3 PLANARITY : 0.006 489 REMARK 3 DIHEDRAL : 5.911 398 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.7422 -35.4329 -14.0999 REMARK 3 T TENSOR REMARK 3 T11: 0.2261 T22: 0.2055 REMARK 3 T33: 0.3022 T12: -0.0470 REMARK 3 T13: -0.0348 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.8019 L22: 1.9636 REMARK 3 L33: 1.8866 L12: 0.6425 REMARK 3 L13: 0.4943 L23: 1.0007 REMARK 3 S TENSOR REMARK 3 S11: -0.0354 S12: 0.0888 S13: -0.0860 REMARK 3 S21: -0.1522 S22: 0.0317 S23: 0.2465 REMARK 3 S31: 0.0687 S32: -0.1655 S33: 0.0086 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 367 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0688 -10.3691 -17.4192 REMARK 3 T TENSOR REMARK 3 T11: 0.2118 T22: 0.2255 REMARK 3 T33: 0.2052 T12: -0.0359 REMARK 3 T13: -0.0388 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.8233 L22: 2.0478 REMARK 3 L33: 1.1221 L12: -0.4545 REMARK 3 L13: 0.1605 L23: -0.1980 REMARK 3 S TENSOR REMARK 3 S11: 0.0233 S12: 0.1245 S13: 0.0267 REMARK 3 S21: -0.2227 S22: 0.0385 S23: 0.1688 REMARK 3 S31: -0.0541 S32: -0.1120 S33: -0.0524 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8K1G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1300039341. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 11C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40012 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 17.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5ZXL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.6 M AMMONIUM TARTRATE DIBASIC, 0.15 REMARK 280 M SODIUM ACETATE TRIBASIC, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 91.00700 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 40.35350 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 91.00700 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 40.35350 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 91.00700 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 40.35350 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 91.00700 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 40.35350 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 91.00700 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 40.35350 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 91.00700 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 40.35350 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 91.00700 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 40.35350 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 91.00700 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 91.00700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 40.35350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 96820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -277.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 HIS A 268 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 365 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 251 -127.96 -145.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 688 DISTANCE = 6.68 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 271 NE2 REMARK 620 2 EDO A 402 O1 107.6 REMARK 620 3 EDO A 407 O2 71.1 72.0 REMARK 620 N 1 2 DBREF 8K1G A 1 367 UNP A6TGD6 A6TGD6_KLEP7 1 367 SEQRES 1 A 367 MET ASP ARG ILE ILE GLN SER PRO GLY LYS TYR ILE GLN SEQRES 2 A 367 GLY THR GLY ALA ILE LYS ARG LEU GLY ASP TYR LEU LYS SEQRES 3 A 367 PRO LEU ALA GLU ARG TRP LEU VAL VAL GLY ASP LYS PHE SEQRES 4 A 367 VAL LEU GLY PHE ALA GLU GLU MET LEU ARG LYS SER LEU SEQRES 5 A 367 ALA ASP ALA GLY LEU ALA ALA GLU ILE ALA PRO PHE GLY SEQRES 6 A 367 GLY GLU CYS SER HIS ASN GLU ILE ASN ARG LEU ARG ASP SEQRES 7 A 367 ILE ALA GLY ASN ALA LYS CYS THR ALA VAL LEU GLY ILE SEQRES 8 A 367 GLY GLY GLY LYS THR LEU ASP THR ALA LYS ALA LEU ALA SEQRES 9 A 367 HIS PHE MET ASN VAL PRO VAL ALA ILE ALA PRO THR ILE SEQRES 10 A 367 ALA SER THR ASP ALA PRO CYS SER ALA LEU SER VAL ILE SEQRES 11 A 367 TYR THR ASP GLU GLY GLU PHE ASP SER TYR LEU MET LEU SEQRES 12 A 367 PRO ARG ASN PRO ASN MET VAL ILE VAL ASP THR GLN ILE SEQRES 13 A 367 VAL ALA GLY ALA PRO ALA ARG LEU LEU ALA ALA GLY ILE SEQRES 14 A 367 GLY ASP ALA LEU ALA THR TRP PHE GLU ALA ARG ALA CYS SEQRES 15 A 367 SER ARG SER GLY ALA THR THR MET ALA GLY GLY LYS CYS SEQRES 16 A 367 THR GLN ALA ALA LEU ALA LEU ALA GLU LEU CYS TYR ASN SEQRES 17 A 367 THR LEU LEU GLU GLU GLY GLU LYS ALA MET LEU ALA ALA SEQRES 18 A 367 GLU GLN HIS VAL VAL THR PRO ALA LEU GLU ARG VAL VAL SEQRES 19 A 367 GLU ALA ASN THR TYR LEU SER GLY VAL GLY PHE GLU SER SEQRES 20 A 367 GLY GLY LEU ALA ALA ALA HIS ALA ILE HIS ASN GLY MET SEQRES 21 A 367 THR ALA ILE PRO ASP ALA HIS HIS TYR TYR HIS GLY GLU SEQRES 22 A 367 LYS VAL ALA PHE GLY THR LEU THR GLN LEU VAL LEU GLU SEQRES 23 A 367 ASN ALA PRO VAL ASP GLU ILE GLU THR VAL ALA ALA LEU SEQRES 24 A 367 CYS HIS SER VAL GLY LEU PRO ILE THR LEU ALA GLN LEU SEQRES 25 A 367 ASP ILE LYS GLY ASP ILE PRO THR LYS MET ARG LEU VAL SEQRES 26 A 367 ALA GLU ALA ALA CYS ALA GLU GLY GLU THR ILE HIS ASN SEQRES 27 A 367 MET PRO GLY GLY VAL ASP SER ASP GLN VAL TYR ALA ALA SEQRES 28 A 367 LEU LEU VAL ALA ASP GLN TYR GLY GLN ARG PHE LEU GLN SEQRES 29 A 367 GLU TRP GLU HET ZN A 401 1 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET GOL A 405 6 HET EDO A 406 4 HET EDO A 407 4 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 EDO 5(C2 H6 O2) FORMUL 6 GOL C3 H8 O3 FORMUL 9 HOH *188(H2 O) HELIX 1 AA1 GLY A 16 LYS A 19 5 4 HELIX 2 AA2 ARG A 20 LYS A 26 1 7 HELIX 3 AA3 ASP A 37 ALA A 55 1 19 HELIX 4 AA4 SER A 69 ALA A 83 1 15 HELIX 5 AA5 GLY A 93 ASN A 108 1 16 HELIX 6 AA6 THR A 154 ALA A 160 1 7 HELIX 7 AA7 PRO A 161 GLY A 186 1 26 HELIX 8 AA8 THR A 196 HIS A 224 1 29 HELIX 9 AA9 THR A 227 GLY A 249 1 23 HELIX 10 AB1 ALA A 251 MET A 260 1 10 HELIX 11 AB2 THR A 261 ILE A 263 5 3 HELIX 12 AB3 TYR A 270 GLU A 286 1 17 HELIX 13 AB4 PRO A 289 VAL A 303 1 15 HELIX 14 AB5 LEU A 309 ASP A 313 5 5 HELIX 15 AB6 ASP A 317 CYS A 330 1 14 HELIX 16 AB7 GLU A 334 MET A 339 5 6 HELIX 17 AB8 ASP A 344 GLU A 367 1 24 SHEET 1 AA1 6 LYS A 10 GLY A 14 0 SHEET 2 AA1 6 MET A 149 ASP A 153 1 O VAL A 152 N ILE A 12 SHEET 3 AA1 6 VAL A 111 PRO A 115 1 N ILE A 113 O ILE A 151 SHEET 4 AA1 6 ALA A 87 GLY A 92 1 N GLY A 90 O ALA A 114 SHEET 5 AA1 6 ARG A 31 GLY A 36 1 N LEU A 33 O LEU A 89 SHEET 6 AA1 6 ALA A 58 PRO A 63 1 O ALA A 62 N VAL A 34 SHEET 1 AA2 2 LEU A 127 TYR A 131 0 SHEET 2 AA2 2 PHE A 137 MET A 142 -1 O LEU A 141 N SER A 128 LINK NE2 HIS A 271 ZN ZN A 401 1555 1555 2.30 LINK ZN ZN A 401 O1 EDO A 402 1555 1555 2.69 LINK ZN ZN A 401 O2 EDO A 407 1555 1555 2.59 CRYST1 182.014 182.014 80.707 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005494 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005494 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012390 0.00000