HEADER OXIDOREDUCTASE 26-JUL-23 8K73 TITLE FACTOR-INHIBITING HYPOXIA-INDUCIBLE FACTOR IN COMPLEX WITH ZN(II) AND TITLE 2 2-(3-HYDROXY-2-((1-(PHENYLSULFONYL)PYRROLIDINE-3-CARBONYL)IMINO)-2,3- TITLE 3 DIHYDROTHIAZOL-4-YL)ACETIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FACTOR INHIBITING HIF-1,FIH-1,HYPOXIA-INDUCIBLE FACTOR COMPND 5 ASPARAGINE HYDROXYLASE; COMPND 6 EC: 1.14.11.30,1.14.11.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HIF1AN, FIH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS FACTOR-INHIBITING HYPOXIA-INDUCIBLE FACTOR, FIH, 2OG DEPENDENT KEYWDS 2 DIOXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.NAKASHIMA,T.P.CORNER,R.Z.R.TEO,L.BREWITZ,C.J.SCHOFIELD REVDAT 1 13-DEC-23 8K73 0 JRNL AUTH T.P.CORNER,R.Z.R.TEO,Y.WU,E.SALAH,Y.NAKASHIMA,G.FIORINI, JRNL AUTH 2 A.TUMBER,A.BRASNETT,J.P.HOLT-MARTYN,W.D.FIGG JR.,X.ZHANG, JRNL AUTH 3 L.BREWITZ,C.J.SCHOFIELD JRNL TITL STRUCTURE-GUIDED OPTIMISATION OF N -HYDROXYTHIAZOLE-DERIVED JRNL TITL 2 INHIBITORS OF FACTOR INHIBITING HYPOXIA-INDUCIBLE JRNL TITL 3 FACTOR-ALPHA. JRNL REF CHEM SCI V. 14 12098 2023 JRNL REFN ISSN 2041-6520 JRNL PMID 37969593 JRNL DOI 10.1039/D3SC04253G REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 66833 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 3375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 61.2400 - 5.8300 1.00 2722 156 0.1655 0.1927 REMARK 3 2 5.8200 - 4.6200 1.00 2766 142 0.1507 0.1629 REMARK 3 3 4.6200 - 4.0400 1.00 2713 146 0.1445 0.1800 REMARK 3 4 4.0400 - 3.6700 1.00 2742 145 0.1804 0.2249 REMARK 3 5 3.6700 - 3.4100 1.00 2744 147 0.1901 0.1955 REMARK 3 6 3.4100 - 3.2100 1.00 2769 122 0.2244 0.2419 REMARK 3 7 3.2100 - 3.0500 1.00 2753 146 0.2352 0.2714 REMARK 3 8 3.0500 - 2.9100 1.00 2716 129 0.2290 0.2256 REMARK 3 9 2.9100 - 2.8000 1.00 2751 160 0.2254 0.2274 REMARK 3 10 2.8000 - 2.7000 1.00 2702 179 0.2572 0.2582 REMARK 3 11 2.7000 - 2.6200 1.00 2741 142 0.2691 0.3001 REMARK 3 12 2.6200 - 2.5400 1.00 2726 149 0.2620 0.3147 REMARK 3 13 2.5400 - 2.4800 1.00 2757 141 0.2404 0.2626 REMARK 3 14 2.4800 - 2.4200 1.00 2705 153 0.2428 0.2872 REMARK 3 15 2.4200 - 2.3600 1.00 2741 161 0.2630 0.2557 REMARK 3 16 2.3600 - 2.3100 1.00 2724 144 0.2838 0.3117 REMARK 3 17 2.3100 - 2.2700 1.00 2772 109 0.3035 0.3620 REMARK 3 18 2.2700 - 2.2200 1.00 2710 163 0.3577 0.3069 REMARK 3 19 2.2200 - 2.1800 1.00 2777 142 0.3513 0.3620 REMARK 3 20 2.1800 - 2.1500 1.00 2703 173 0.3731 0.4074 REMARK 3 21 2.1500 - 2.1100 0.99 2648 160 0.3873 0.3941 REMARK 3 22 2.1100 - 2.0800 0.98 2763 125 0.4041 0.4029 REMARK 3 23 2.0800 - 2.0500 0.68 1889 75 0.4211 0.3792 REMARK 3 24 2.0500 - 2.0200 0.52 1424 66 0.4316 0.4625 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2990 REMARK 3 ANGLE : 0.589 4069 REMARK 3 CHIRALITY : 0.045 396 REMARK 3 PLANARITY : 0.004 533 REMARK 3 DIHEDRAL : 16.771 1097 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5983 -29.5024 21.9742 REMARK 3 T TENSOR REMARK 3 T11: 0.8380 T22: 0.5838 REMARK 3 T33: 0.8113 T12: 0.0273 REMARK 3 T13: 0.2701 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 0.4340 L22: 0.6440 REMARK 3 L33: 0.7653 L12: -0.5544 REMARK 3 L13: -0.5808 L23: 0.7483 REMARK 3 S TENSOR REMARK 3 S11: -0.1002 S12: -0.2905 S13: 0.0100 REMARK 3 S21: 0.7598 S22: -0.3289 S23: 0.9621 REMARK 3 S31: 0.2924 S32: -0.6176 S33: 0.3706 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0151 -19.7517 22.4147 REMARK 3 T TENSOR REMARK 3 T11: 0.8675 T22: 0.5014 REMARK 3 T33: 0.5631 T12: 0.0507 REMARK 3 T13: 0.1471 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 1.9688 L22: 3.2846 REMARK 3 L33: 2.4943 L12: -0.2977 REMARK 3 L13: 0.1695 L23: -0.0350 REMARK 3 S TENSOR REMARK 3 S11: 0.0395 S12: -0.3925 S13: 0.2671 REMARK 3 S21: 0.4912 S22: 0.1588 S23: -0.0791 REMARK 3 S31: -0.1078 S32: -0.0219 S33: -0.1374 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5325 -22.2870 -3.8510 REMARK 3 T TENSOR REMARK 3 T11: 1.0568 T22: 0.7812 REMARK 3 T33: 0.6481 T12: 0.0947 REMARK 3 T13: -0.0527 T23: 0.1523 REMARK 3 L TENSOR REMARK 3 L11: 2.7586 L22: 1.3492 REMARK 3 L33: 0.6625 L12: -0.4829 REMARK 3 L13: -0.0500 L23: -0.0678 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: 0.7958 S13: 0.1059 REMARK 3 S21: -0.8248 S22: -0.2450 S23: 0.1405 REMARK 3 S31: -0.5106 S32: -0.3002 S33: 0.2193 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3197 -25.4734 7.8708 REMARK 3 T TENSOR REMARK 3 T11: 0.6550 T22: 0.4277 REMARK 3 T33: 0.5258 T12: 0.0367 REMARK 3 T13: 0.0921 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 1.2738 L22: 2.9640 REMARK 3 L33: 2.7717 L12: -0.3185 REMARK 3 L13: -0.5293 L23: 1.6616 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: 0.1709 S13: 0.1145 REMARK 3 S21: -0.1404 S22: 0.0416 S23: 0.2632 REMARK 3 S31: -0.3146 S32: -0.0929 S33: -0.0588 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5501 -26.1327 13.0182 REMARK 3 T TENSOR REMARK 3 T11: 0.6577 T22: 0.5473 REMARK 3 T33: 0.6968 T12: 0.0287 REMARK 3 T13: 0.0610 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 1.2088 L22: 2.7192 REMARK 3 L33: 2.1803 L12: 0.2123 REMARK 3 L13: -0.5849 L23: 0.7713 REMARK 3 S TENSOR REMARK 3 S11: 0.1570 S12: 0.1215 S13: -0.1068 REMARK 3 S21: 0.1190 S22: 0.1485 S23: -0.2159 REMARK 3 S31: -0.2336 S32: 0.3275 S33: -0.2898 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 312 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7475 -43.7465 -1.6353 REMARK 3 T TENSOR REMARK 3 T11: 0.5860 T22: 0.5999 REMARK 3 T33: 0.5282 T12: -0.0196 REMARK 3 T13: 0.0354 T23: -0.0345 REMARK 3 L TENSOR REMARK 3 L11: 1.9315 L22: 2.7198 REMARK 3 L33: 2.2823 L12: -0.8662 REMARK 3 L13: -0.4421 L23: 0.2131 REMARK 3 S TENSOR REMARK 3 S11: -0.0219 S12: 0.1598 S13: 0.4702 REMARK 3 S21: -0.2171 S22: -0.0263 S23: -0.2068 REMARK 3 S31: -0.3330 S32: 0.2243 S33: 0.0280 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8K73 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1300033515. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66833 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 74.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 26.50 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 26.60 REMARK 200 R MERGE FOR SHELL (I) : 4.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4B7K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.27 MM FIH, 0.5 MM ZINC ACETATE, 2 MM REMARK 280 RT105, 0.1 M HEPES, PH 7.5, 6%W/V PEG400, 1.6 M AMMONIUM SULFATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.62950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.30450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.30450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.31475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.30450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.30450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 108.94425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.30450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.30450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.31475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.30450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.30450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 108.94425 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.62950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -218.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 86.60900 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -86.60900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 ALA A 8 REMARK 465 VAL A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 29 CD OE1 OE2 REMARK 470 LEU A 101 CG CD1 CD2 REMARK 470 LYS A 106 CD CE NZ REMARK 470 ASN A 113 CG OD1 ND2 REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 ARG A 117 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 133 CD OE1 NE2 REMARK 470 ARG A 156 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 66 40.44 -141.88 REMARK 500 ASN A 113 46.27 -90.44 REMARK 500 ASN A 151 -164.72 -127.22 REMARK 500 ILE A 210 -56.30 -121.30 REMARK 500 ARG A 238 -1.36 77.73 REMARK 500 ASN A 246 71.85 -153.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 410 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 199 NE2 REMARK 620 2 ASP A 201 OD2 128.1 REMARK 620 3 HIS A 279 NE2 90.5 80.9 REMARK 620 4 VK6 A 411 O06 96.7 132.1 83.0 REMARK 620 N 1 2 3 DBREF 8K73 A 1 349 UNP Q9NWT6 HIF1N_HUMAN 1 349 SEQRES 1 A 349 MET ALA ALA THR ALA ALA GLU ALA VAL ALA SER GLY SER SEQRES 2 A 349 GLY GLU PRO ARG GLU GLU ALA GLY ALA LEU GLY PRO ALA SEQRES 3 A 349 TRP ASP GLU SER GLN LEU ARG SER TYR SER PHE PRO THR SEQRES 4 A 349 ARG PRO ILE PRO ARG LEU SER GLN SER ASP PRO ARG ALA SEQRES 5 A 349 GLU GLU LEU ILE GLU ASN GLU GLU PRO VAL VAL LEU THR SEQRES 6 A 349 ASP THR ASN LEU VAL TYR PRO ALA LEU LYS TRP ASP LEU SEQRES 7 A 349 GLU TYR LEU GLN GLU ASN ILE GLY ASN GLY ASP PHE SER SEQRES 8 A 349 VAL TYR SER ALA SER THR HIS LYS PHE LEU TYR TYR ASP SEQRES 9 A 349 GLU LYS LYS MET ALA ASN PHE GLN ASN PHE LYS PRO ARG SEQRES 10 A 349 SER ASN ARG GLU GLU MET LYS PHE HIS GLU PHE VAL GLU SEQRES 11 A 349 LYS LEU GLN ASP ILE GLN GLN ARG GLY GLY GLU GLU ARG SEQRES 12 A 349 LEU TYR LEU GLN GLN THR LEU ASN ASP THR VAL GLY ARG SEQRES 13 A 349 LYS ILE VAL MET ASP PHE LEU GLY PHE ASN TRP ASN TRP SEQRES 14 A 349 ILE ASN LYS GLN GLN GLY LYS ARG GLY TRP GLY GLN LEU SEQRES 15 A 349 THR SER ASN LEU LEU LEU ILE GLY MET GLU GLY ASN VAL SEQRES 16 A 349 THR PRO ALA HIS TYR ASP GLU GLN GLN ASN PHE PHE ALA SEQRES 17 A 349 GLN ILE LYS GLY TYR LYS ARG CYS ILE LEU PHE PRO PRO SEQRES 18 A 349 ASP GLN PHE GLU CYS LEU TYR PRO TYR PRO VAL HIS HIS SEQRES 19 A 349 PRO CYS ASP ARG GLN SER GLN VAL ASP PHE ASP ASN PRO SEQRES 20 A 349 ASP TYR GLU ARG PHE PRO ASN PHE GLN ASN VAL VAL GLY SEQRES 21 A 349 TYR GLU THR VAL VAL GLY PRO GLY ASP VAL LEU TYR ILE SEQRES 22 A 349 PRO MET TYR TRP TRP HIS HIS ILE GLU SER LEU LEU ASN SEQRES 23 A 349 GLY GLY ILE THR ILE THR VAL ASN PHE TRP TYR LYS GLY SEQRES 24 A 349 ALA PRO THR PRO LYS ARG ILE GLU TYR PRO LEU LYS ALA SEQRES 25 A 349 HIS GLN LYS VAL ALA ILE MET ARG ASN ILE GLU LYS MET SEQRES 26 A 349 LEU GLY GLU ALA LEU GLY ASN PRO GLN GLU VAL GLY PRO SEQRES 27 A 349 LEU LEU ASN THR MET ILE LYS GLY ARG TYR ASN HET SO4 A 401 5 HET SO4 A 402 5 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET GOL A 408 6 HET GOL A 409 6 HET ZN A 410 1 HET VK6 A 411 27 HET SO4 A 412 5 HET SO4 A 413 5 HET SO4 A 414 5 HET SO4 A 415 5 HET SO4 A 416 5 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETNAM VK6 2-[(2~{Z})-3-OXIDANYL-2-[(3~{R})-1-(PHENYLSULFONYL) HETNAM 2 VK6 PYRROLIDIN-3-YL]CARBONYLIMINO-1,3-THIAZOL-4- HETNAM 3 VK6 YL]ETHANOIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 7(O4 S 2-) FORMUL 4 GOL 7(C3 H8 O3) FORMUL 11 ZN ZN 2+ FORMUL 12 VK6 C16 H17 N3 O6 S2 FORMUL 18 HOH *81(H2 O) HELIX 1 AA1 GLU A 19 LEU A 23 5 5 HELIX 2 AA2 ASP A 28 LEU A 32 5 5 HELIX 3 AA3 ASP A 49 ASN A 58 1 10 HELIX 4 AA4 VAL A 70 TRP A 76 5 7 HELIX 5 AA5 ASP A 77 ILE A 85 1 9 HELIX 6 AA6 ASP A 104 PHE A 111 5 8 HELIX 7 AA7 LYS A 124 GLY A 139 1 16 HELIX 8 AA8 GLY A 155 GLY A 164 1 10 HELIX 9 AA9 ASN A 166 ARG A 177 1 12 HELIX 10 AB1 PRO A 220 ASP A 222 5 3 HELIX 11 AB2 GLN A 223 TYR A 228 1 6 HELIX 12 AB3 PHE A 252 VAL A 258 5 7 HELIX 13 AB4 LYS A 311 GLY A 331 1 21 HELIX 14 AB5 ASN A 332 GLN A 334 5 3 HELIX 15 AB6 GLU A 335 LYS A 345 1 11 SHEET 1 AA1 5 THR A 39 PRO A 41 0 SHEET 2 AA1 5 GLY A 260 VAL A 265 1 O GLU A 262 N ARG A 40 SHEET 3 AA1 5 LYS A 214 PHE A 219 -1 N LEU A 218 O TYR A 261 SHEET 4 AA1 5 TRP A 278 SER A 283 -1 O HIS A 280 N ILE A 217 SHEET 5 AA1 5 VAL A 195 TYR A 200 -1 N THR A 196 O ILE A 281 SHEET 1 AA2 9 ARG A 44 LEU A 45 0 SHEET 2 AA2 9 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45 SHEET 3 AA2 9 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64 SHEET 4 AA2 9 GLN A 203 LYS A 211 -1 N PHE A 207 O LEU A 271 SHEET 5 AA2 9 THR A 290 LYS A 298 -1 O TYR A 297 N GLN A 204 SHEET 6 AA2 9 LEU A 182 GLY A 190 -1 N LEU A 188 O THR A 292 SHEET 7 AA2 9 ARG A 143 THR A 149 -1 N LEU A 146 O ILE A 189 SHEET 8 AA2 9 PHE A 90 ALA A 95 -1 N TYR A 93 O TYR A 145 SHEET 9 AA2 9 ARG A 120 MET A 123 -1 O MET A 123 N PHE A 90 LINK NE2 HIS A 199 ZN ZN A 410 1555 1555 2.16 LINK OD2 ASP A 201 ZN ZN A 410 1555 1555 2.03 LINK NE2 HIS A 279 ZN ZN A 410 1555 1555 2.31 LINK ZN ZN A 410 O06 VK6 A 411 1555 1555 1.84 CISPEP 1 TYR A 308 PRO A 309 0 0.43 CRYST1 86.609 86.609 145.259 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011546 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006884 0.00000