data_8K8A # _entry.id 8K8A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8K8A pdb_00008k8a 10.2210/pdb8k8a/pdb WWPDB D_1300039780 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-03-06 2 'Structure model' 1 1 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_citation.journal_volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8K8A _pdbx_database_status.recvd_initial_deposition_date 2023-07-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 chensizhuo@163.com sizhuo Chen ? 'principal investigator/group leader' 0000-0002-9014-4723 3 keliu2015@mail.ccnu.edu.cn ke Liu ? 'principal investigator/group leader' 0000-0002-7082-262X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Min, J.R.' 1 ? 'Chen, S.Z.' 2 ? 'Liu, K.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 300 _citation.language ? _citation.page_first 105776 _citation.page_last 105776 _citation.title 'Structural basis for specific DNA sequence recognition by the transcription factor NFIL3.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jbc.2024.105776 _citation.pdbx_database_id_PubMed 38382670 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, S.' 1 ? primary 'Lei, M.' 2 ? primary 'Liu, K.' 3 ? primary 'Min, J.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nuclear factor interleukin-3-regulated protein' 8485.794 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*AP*TP*TP*AP*CP*GP*TP*AP*AP*TP*G)-3') ; 3661.416 2 ? ? ? ? 3 water nat water 18.015 74 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;E4 promoter-binding protein 4,Interleukin-3 promoter transcriptional activator,Interleukin-3-binding protein 1,Transcriptional activator NF-IL3A ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GEFMPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQ GEFMPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQ A,B ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DT)(DT)(DA)(DC)(DG)(DT)(DA)(DA)(DT)(DG)' CATTACGTAATG C,D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 PHE n 1 4 MET n 1 5 PRO n 1 6 ASP n 1 7 GLU n 1 8 LYS n 1 9 LYS n 1 10 ASP n 1 11 ALA n 1 12 MET n 1 13 TYR n 1 14 TRP n 1 15 GLU n 1 16 LYS n 1 17 ARG n 1 18 ARG n 1 19 LYS n 1 20 ASN n 1 21 ASN n 1 22 GLU n 1 23 ALA n 1 24 ALA n 1 25 LYS n 1 26 ARG n 1 27 SER n 1 28 ARG n 1 29 GLU n 1 30 LYS n 1 31 ARG n 1 32 ARG n 1 33 LEU n 1 34 ASN n 1 35 ASP n 1 36 LEU n 1 37 VAL n 1 38 LEU n 1 39 GLU n 1 40 ASN n 1 41 LYS n 1 42 LEU n 1 43 ILE n 1 44 ALA n 1 45 LEU n 1 46 GLY n 1 47 GLU n 1 48 GLU n 1 49 ASN n 1 50 ALA n 1 51 THR n 1 52 LEU n 1 53 LYS n 1 54 ALA n 1 55 GLU n 1 56 LEU n 1 57 LEU n 1 58 SER n 1 59 LEU n 1 60 LYS n 1 61 LEU n 1 62 LYS n 1 63 PHE n 1 64 GLY n 1 65 LEU n 1 66 ILE n 1 67 SER n 1 68 SER n 1 69 THR n 1 70 ALA n 1 71 TYR n 1 72 ALA n 1 73 GLN n 2 1 DC n 2 2 DA n 2 3 DT n 2 4 DT n 2 5 DA n 2 6 DC n 2 7 DG n 2 8 DT n 2 9 DA n 2 10 DA n 2 11 DT n 2 12 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 73 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NFIL3, E4BP4, IL3BP1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 64 ? ? ? A . n A 1 2 GLU 2 65 ? ? ? A . n A 1 3 PHE 3 66 ? ? ? A . n A 1 4 MET 4 67 67 MET MET A . n A 1 5 PRO 5 68 68 PRO PRO A . n A 1 6 ASP 6 69 69 ASP ASP A . n A 1 7 GLU 7 70 70 GLU GLU A . n A 1 8 LYS 8 71 71 LYS LYS A . n A 1 9 LYS 9 72 72 LYS LYS A . n A 1 10 ASP 10 73 73 ASP ASP A . n A 1 11 ALA 11 74 74 ALA ALA A . n A 1 12 MET 12 75 75 MET MET A . n A 1 13 TYR 13 76 76 TYR TYR A . n A 1 14 TRP 14 77 77 TRP TRP A . n A 1 15 GLU 15 78 78 GLU GLU A . n A 1 16 LYS 16 79 79 LYS LYS A . n A 1 17 ARG 17 80 80 ARG ARG A . n A 1 18 ARG 18 81 81 ARG ARG A . n A 1 19 LYS 19 82 82 LYS LYS A . n A 1 20 ASN 20 83 83 ASN ASN A . n A 1 21 ASN 21 84 84 ASN ASN A . n A 1 22 GLU 22 85 85 GLU GLU A . n A 1 23 ALA 23 86 86 ALA ALA A . n A 1 24 ALA 24 87 87 ALA ALA A . n A 1 25 LYS 25 88 88 LYS LYS A . n A 1 26 ARG 26 89 89 ARG ARG A . n A 1 27 SER 27 90 90 SER SER A . n A 1 28 ARG 28 91 91 ARG ARG A . n A 1 29 GLU 29 92 92 GLU GLU A . n A 1 30 LYS 30 93 93 LYS LYS A . n A 1 31 ARG 31 94 94 ARG ARG A . n A 1 32 ARG 32 95 95 ARG ARG A . n A 1 33 LEU 33 96 96 LEU LEU A . n A 1 34 ASN 34 97 97 ASN ASN A . n A 1 35 ASP 35 98 98 ASP ASP A . n A 1 36 LEU 36 99 99 LEU LEU A . n A 1 37 VAL 37 100 100 VAL VAL A . n A 1 38 LEU 38 101 101 LEU LEU A . n A 1 39 GLU 39 102 102 GLU GLU A . n A 1 40 ASN 40 103 103 ASN ASN A . n A 1 41 LYS 41 104 104 LYS LYS A . n A 1 42 LEU 42 105 105 LEU LEU A . n A 1 43 ILE 43 106 106 ILE ILE A . n A 1 44 ALA 44 107 107 ALA ALA A . n A 1 45 LEU 45 108 108 LEU LEU A . n A 1 46 GLY 46 109 109 GLY GLY A . n A 1 47 GLU 47 110 110 GLU GLU A . n A 1 48 GLU 48 111 111 GLU GLU A . n A 1 49 ASN 49 112 112 ASN ASN A . n A 1 50 ALA 50 113 113 ALA ALA A . n A 1 51 THR 51 114 114 THR THR A . n A 1 52 LEU 52 115 115 LEU LEU A . n A 1 53 LYS 53 116 116 LYS LYS A . n A 1 54 ALA 54 117 117 ALA ALA A . n A 1 55 GLU 55 118 118 GLU GLU A . n A 1 56 LEU 56 119 119 LEU LEU A . n A 1 57 LEU 57 120 120 LEU LEU A . n A 1 58 SER 58 121 121 SER SER A . n A 1 59 LEU 59 122 122 LEU LEU A . n A 1 60 LYS 60 123 123 LYS LYS A . n A 1 61 LEU 61 124 124 LEU LEU A . n A 1 62 LYS 62 125 125 LYS LYS A . n A 1 63 PHE 63 126 126 PHE PHE A . n A 1 64 GLY 64 127 127 GLY GLY A . n A 1 65 LEU 65 128 128 LEU LEU A . n A 1 66 ILE 66 129 ? ? ? A . n A 1 67 SER 67 130 ? ? ? A . n A 1 68 SER 68 131 ? ? ? A . n A 1 69 THR 69 132 ? ? ? A . n A 1 70 ALA 70 133 ? ? ? A . n A 1 71 TYR 71 134 ? ? ? A . n A 1 72 ALA 72 135 ? ? ? A . n A 1 73 GLN 73 136 ? ? ? A . n B 1 1 GLY 1 64 ? ? ? B . n B 1 2 GLU 2 65 ? ? ? B . n B 1 3 PHE 3 66 ? ? ? B . n B 1 4 MET 4 67 ? ? ? B . n B 1 5 PRO 5 68 ? ? ? B . n B 1 6 ASP 6 69 ? ? ? B . n B 1 7 GLU 7 70 ? ? ? B . n B 1 8 LYS 8 71 ? ? ? B . n B 1 9 LYS 9 72 72 LYS LYS B . n B 1 10 ASP 10 73 73 ASP ASP B . n B 1 11 ALA 11 74 74 ALA ALA B . n B 1 12 MET 12 75 75 MET MET B . n B 1 13 TYR 13 76 76 TYR TYR B . n B 1 14 TRP 14 77 77 TRP TRP B . n B 1 15 GLU 15 78 78 GLU GLU B . n B 1 16 LYS 16 79 79 LYS LYS B . n B 1 17 ARG 17 80 80 ARG ARG B . n B 1 18 ARG 18 81 81 ARG ARG B . n B 1 19 LYS 19 82 82 LYS LYS B . n B 1 20 ASN 20 83 83 ASN ASN B . n B 1 21 ASN 21 84 84 ASN ASN B . n B 1 22 GLU 22 85 85 GLU GLU B . n B 1 23 ALA 23 86 86 ALA ALA B . n B 1 24 ALA 24 87 87 ALA ALA B . n B 1 25 LYS 25 88 88 LYS LYS B . n B 1 26 ARG 26 89 89 ARG ARG B . n B 1 27 SER 27 90 90 SER SER B . n B 1 28 ARG 28 91 91 ARG ARG B . n B 1 29 GLU 29 92 92 GLU GLU B . n B 1 30 LYS 30 93 93 LYS LYS B . n B 1 31 ARG 31 94 94 ARG ARG B . n B 1 32 ARG 32 95 95 ARG ARG B . n B 1 33 LEU 33 96 96 LEU LEU B . n B 1 34 ASN 34 97 97 ASN ASN B . n B 1 35 ASP 35 98 98 ASP ASP B . n B 1 36 LEU 36 99 99 LEU LEU B . n B 1 37 VAL 37 100 100 VAL VAL B . n B 1 38 LEU 38 101 101 LEU LEU B . n B 1 39 GLU 39 102 102 GLU GLU B . n B 1 40 ASN 40 103 103 ASN ASN B . n B 1 41 LYS 41 104 104 LYS LYS B . n B 1 42 LEU 42 105 105 LEU LEU B . n B 1 43 ILE 43 106 106 ILE ILE B . n B 1 44 ALA 44 107 107 ALA ALA B . n B 1 45 LEU 45 108 108 LEU LEU B . n B 1 46 GLY 46 109 109 GLY GLY B . n B 1 47 GLU 47 110 110 GLU GLU B . n B 1 48 GLU 48 111 111 GLU GLU B . n B 1 49 ASN 49 112 112 ASN ASN B . n B 1 50 ALA 50 113 113 ALA ALA B . n B 1 51 THR 51 114 114 THR THR B . n B 1 52 LEU 52 115 115 LEU LEU B . n B 1 53 LYS 53 116 116 LYS LYS B . n B 1 54 ALA 54 117 117 ALA ALA B . n B 1 55 GLU 55 118 118 GLU GLU B . n B 1 56 LEU 56 119 119 LEU LEU B . n B 1 57 LEU 57 120 120 LEU LEU B . n B 1 58 SER 58 121 121 SER SER B . n B 1 59 LEU 59 122 122 LEU LEU B . n B 1 60 LYS 60 123 123 LYS LYS B . n B 1 61 LEU 61 124 124 LEU LEU B . n B 1 62 LYS 62 125 125 LYS LYS B . n B 1 63 PHE 63 126 126 PHE PHE B . n B 1 64 GLY 64 127 127 GLY GLY B . n B 1 65 LEU 65 128 128 LEU LEU B . n B 1 66 ILE 66 129 129 ILE ILE B . n B 1 67 SER 67 130 130 SER SER B . n B 1 68 SER 68 131 ? ? ? B . n B 1 69 THR 69 132 ? ? ? B . n B 1 70 ALA 70 133 ? ? ? B . n B 1 71 TYR 71 134 ? ? ? B . n B 1 72 ALA 72 135 ? ? ? B . n B 1 73 GLN 73 136 ? ? ? B . n C 2 1 DC 1 1 1 DC DC C . n C 2 2 DA 2 2 2 DA DA C . n C 2 3 DT 3 3 3 DT DT C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DC 6 6 6 DC DC C . n C 2 7 DG 7 7 7 DG DG C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DA 10 10 10 DA DA C . n C 2 11 DT 11 11 11 DT DT C . n C 2 12 DG 12 12 12 DG DG C . n D 2 1 DC 1 1 1 DC DC D . n D 2 2 DA 2 2 2 DA DA D . n D 2 3 DT 3 3 3 DT DT D . n D 2 4 DT 4 4 4 DT DT D . n D 2 5 DA 5 5 5 DA DA D . n D 2 6 DC 6 6 6 DC DC D . n D 2 7 DG 7 7 7 DG DG D . n D 2 8 DT 8 8 8 DT DT D . n D 2 9 DA 9 9 9 DA DA D . n D 2 10 DA 10 10 10 DA DA D . n D 2 11 DT 11 11 11 DT DT D . n D 2 12 DG 12 12 12 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 201 80 HOH HOH A . E 3 HOH 2 202 39 HOH HOH A . E 3 HOH 3 203 29 HOH HOH A . E 3 HOH 4 204 49 HOH HOH A . E 3 HOH 5 205 37 HOH HOH A . E 3 HOH 6 206 22 HOH HOH A . E 3 HOH 7 207 19 HOH HOH A . E 3 HOH 8 208 69 HOH HOH A . E 3 HOH 9 209 25 HOH HOH A . E 3 HOH 10 210 6 HOH HOH A . E 3 HOH 11 211 30 HOH HOH A . E 3 HOH 12 212 41 HOH HOH A . E 3 HOH 13 213 62 HOH HOH A . E 3 HOH 14 214 20 HOH HOH A . E 3 HOH 15 215 11 HOH HOH A . E 3 HOH 16 216 45 HOH HOH A . E 3 HOH 17 217 68 HOH HOH A . E 3 HOH 18 218 42 HOH HOH A . E 3 HOH 19 219 4 HOH HOH A . E 3 HOH 20 220 34 HOH HOH A . E 3 HOH 21 221 15 HOH HOH A . E 3 HOH 22 222 47 HOH HOH A . E 3 HOH 23 223 58 HOH HOH A . E 3 HOH 24 224 55 HOH HOH A . E 3 HOH 25 225 27 HOH HOH A . E 3 HOH 26 226 40 HOH HOH A . E 3 HOH 27 227 12 HOH HOH A . E 3 HOH 28 228 32 HOH HOH A . E 3 HOH 29 229 36 HOH HOH A . E 3 HOH 30 230 53 HOH HOH A . E 3 HOH 31 231 54 HOH HOH A . E 3 HOH 32 232 38 HOH HOH A . F 3 HOH 1 201 3 HOH HOH B . F 3 HOH 2 202 7 HOH HOH B . F 3 HOH 3 203 67 HOH HOH B . F 3 HOH 4 204 13 HOH HOH B . F 3 HOH 5 205 64 HOH HOH B . F 3 HOH 6 206 48 HOH HOH B . F 3 HOH 7 207 31 HOH HOH B . F 3 HOH 8 208 9 HOH HOH B . F 3 HOH 9 209 23 HOH HOH B . F 3 HOH 10 210 26 HOH HOH B . F 3 HOH 11 211 18 HOH HOH B . F 3 HOH 12 212 61 HOH HOH B . F 3 HOH 13 213 81 HOH HOH B . F 3 HOH 14 214 59 HOH HOH B . F 3 HOH 15 215 63 HOH HOH B . F 3 HOH 16 216 35 HOH HOH B . F 3 HOH 17 217 33 HOH HOH B . G 3 HOH 1 101 28 HOH HOH C . G 3 HOH 2 102 16 HOH HOH C . G 3 HOH 3 103 44 HOH HOH C . G 3 HOH 4 104 24 HOH HOH C . G 3 HOH 5 105 66 HOH HOH C . G 3 HOH 6 106 2 HOH HOH C . G 3 HOH 7 107 75 HOH HOH C . G 3 HOH 8 108 10 HOH HOH C . G 3 HOH 9 109 76 HOH HOH C . G 3 HOH 10 110 60 HOH HOH C . G 3 HOH 11 111 8 HOH HOH C . G 3 HOH 12 112 43 HOH HOH C . G 3 HOH 13 113 71 HOH HOH C . G 3 HOH 14 114 72 HOH HOH C . G 3 HOH 15 115 50 HOH HOH C . H 3 HOH 1 101 21 HOH HOH D . H 3 HOH 2 102 14 HOH HOH D . H 3 HOH 3 103 1 HOH HOH D . H 3 HOH 4 104 65 HOH HOH D . H 3 HOH 5 105 46 HOH HOH D . H 3 HOH 6 106 5 HOH HOH D . H 3 HOH 7 107 70 HOH HOH D . H 3 HOH 8 108 52 HOH HOH D . H 3 HOH 9 109 51 HOH HOH D . H 3 HOH 10 110 17 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.20.1_4487)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8K8A _cell.details ? _cell.formula_units_Z ? _cell.length_a 74.030 _cell.length_a_esd ? _cell.length_b 96.950 _cell.length_b_esd ? _cell.length_c 38.950 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8K8A _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8K8A _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.88 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Sodium acetate trihydrate pH 5.6, 8% w/v Polyethylene glycol 4000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-12-12 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8K8A _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.06 _reflns.d_resolution_low 58.82 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17871 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.06 _reflns_shell.d_res_low 2.17 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2578 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.904 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8K8A _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.07 _refine.ls_d_res_low 28.09 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17534 _refine.ls_number_reflns_R_free 921 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.88 _refine.ls_percent_reflns_R_free 5.25 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2297 _refine.ls_R_factor_R_free 0.2761 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2271 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.71 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.28 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 997 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 1557 _refine_hist.d_res_high 2.07 _refine_hist.d_res_low 28.09 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 1548 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.936 ? 2167 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 27.093 ? 365 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.044 ? 240 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 192 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.07 2.18 . . 115 2337 99.00 . . . . 0.2901 . . . . . . . . . . . 0.3498 'X-RAY DIFFRACTION' 2.18 2.32 . . 139 2262 97.00 . . . . 0.3707 . . . . . . . . . . . 0.4312 'X-RAY DIFFRACTION' 2.32 2.49 . . 127 2357 100.00 . . . . 0.2709 . . . . . . . . . . . 0.3208 'X-RAY DIFFRACTION' 2.49 2.74 . . 127 2358 99.00 . . . . 0.2529 . . . . . . . . . . . 0.2872 'X-RAY DIFFRACTION' 2.75 3.14 . . 142 2376 100.00 . . . . 0.2697 . . . . . . . . . . . 0.3253 'X-RAY DIFFRACTION' 3.14 3.96 . . 138 2384 99.00 . . . . 0.2109 . . . . . . . . . . . 0.2475 'X-RAY DIFFRACTION' 3.96 28.09 . . 133 2539 99.00 . . . . 0.1870 . . . . . . . . . . . 0.2390 # _struct.entry_id 8K8A _struct.title 'Crystal structure of NFIL3 in complex with TTACGTAA DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8K8A _struct_keywords.text 'NFIL3, bZIP, DNA-binding, C/EBP-related protein, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP NFIL3_HUMAN Q16649 ? 1 PDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISSTAYAQ 68 2 PDB 8K8A 8K8A ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8K8A A 5 ? 73 ? Q16649 68 ? 136 ? 68 136 2 1 8K8A B 5 ? 73 ? Q16649 68 ? 136 ? 68 136 3 2 8K8A C 1 ? 12 ? 8K8A 1 ? 12 ? 1 12 4 2 8K8A D 1 ? 12 ? 8K8A 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8K8A GLY A 1 ? UNP Q16649 ? ? 'expression tag' 64 1 1 8K8A GLU A 2 ? UNP Q16649 ? ? 'expression tag' 65 2 1 8K8A PHE A 3 ? UNP Q16649 ? ? 'expression tag' 66 3 1 8K8A MET A 4 ? UNP Q16649 ? ? 'expression tag' 67 4 2 8K8A GLY B 1 ? UNP Q16649 ? ? 'expression tag' 64 5 2 8K8A GLU B 2 ? UNP Q16649 ? ? 'expression tag' 65 6 2 8K8A PHE B 3 ? UNP Q16649 ? ? 'expression tag' 66 7 2 8K8A MET B 4 ? UNP Q16649 ? ? 'expression tag' 67 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5410 ? 1 MORE -37 ? 1 'SSA (A^2)' 12370 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 5 ? LYS A 9 ? PRO A 68 LYS A 72 5 ? 5 HELX_P HELX_P2 AA2 ASP A 10 ? PHE A 63 ? ASP A 73 PHE A 126 1 ? 54 HELX_P HELX_P3 AA3 ASP B 10 ? PHE B 63 ? ASP B 73 PHE B 126 1 ? 54 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 12 N1 ? ? C DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 12 O6 ? ? C DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 12 N2 ? ? C DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 11 N3 ? ? C DA 2 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 11 O4 ? ? C DA 2 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 6 N3 ? ? C DG 7 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 6 O2 ? ? C DG 7 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 6 N4 ? ? C DG 7 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 8 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 8 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 9 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 9 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 3 N3 ? ? C DA 10 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 10 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 2 N1 ? ? C DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 2 N6 ? ? C DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 12 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 12 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 12 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 12 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 12 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 12 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 214 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 0.8850 _pdbx_refine_tls.origin_y 22.1922 _pdbx_refine_tls.origin_z -5.8411 _pdbx_refine_tls.T[1][1] 0.3445 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0221 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0302 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.3618 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0264 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.3340 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.3534 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.8050 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.2857 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 2.8958 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.0481 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] -0.1735 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0444 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.0774 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0696 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0368 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.2093 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0521 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0216 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0194 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0000 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 64 ? A GLY 1 2 1 Y 1 A GLU 65 ? A GLU 2 3 1 Y 1 A PHE 66 ? A PHE 3 4 1 Y 1 A ILE 129 ? A ILE 66 5 1 Y 1 A SER 130 ? A SER 67 6 1 Y 1 A SER 131 ? A SER 68 7 1 Y 1 A THR 132 ? A THR 69 8 1 Y 1 A ALA 133 ? A ALA 70 9 1 Y 1 A TYR 134 ? A TYR 71 10 1 Y 1 A ALA 135 ? A ALA 72 11 1 Y 1 A GLN 136 ? A GLN 73 12 1 Y 1 B GLY 64 ? B GLY 1 13 1 Y 1 B GLU 65 ? B GLU 2 14 1 Y 1 B PHE 66 ? B PHE 3 15 1 Y 1 B MET 67 ? B MET 4 16 1 Y 1 B PRO 68 ? B PRO 5 17 1 Y 1 B ASP 69 ? B ASP 6 18 1 Y 1 B GLU 70 ? B GLU 7 19 1 Y 1 B LYS 71 ? B LYS 8 20 1 Y 1 B SER 131 ? B SER 68 21 1 Y 1 B THR 132 ? B THR 69 22 1 Y 1 B ALA 133 ? B ALA 70 23 1 Y 1 B TYR 134 ? B TYR 71 24 1 Y 1 B ALA 135 ? B ALA 72 25 1 Y 1 B GLN 136 ? B GLN 73 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HOH O O N N 266 HOH H1 H N N 267 HOH H2 H N N 268 ILE N N N N 269 ILE CA C N S 270 ILE C C N N 271 ILE O O N N 272 ILE CB C N S 273 ILE CG1 C N N 274 ILE CG2 C N N 275 ILE CD1 C N N 276 ILE OXT O N N 277 ILE H H N N 278 ILE H2 H N N 279 ILE HA H N N 280 ILE HB H N N 281 ILE HG12 H N N 282 ILE HG13 H N N 283 ILE HG21 H N N 284 ILE HG22 H N N 285 ILE HG23 H N N 286 ILE HD11 H N N 287 ILE HD12 H N N 288 ILE HD13 H N N 289 ILE HXT H N N 290 LEU N N N N 291 LEU CA C N S 292 LEU C C N N 293 LEU O O N N 294 LEU CB C N N 295 LEU CG C N N 296 LEU CD1 C N N 297 LEU CD2 C N N 298 LEU OXT O N N 299 LEU H H N N 300 LEU H2 H N N 301 LEU HA H N N 302 LEU HB2 H N N 303 LEU HB3 H N N 304 LEU HG H N N 305 LEU HD11 H N N 306 LEU HD12 H N N 307 LEU HD13 H N N 308 LEU HD21 H N N 309 LEU HD22 H N N 310 LEU HD23 H N N 311 LEU HXT H N N 312 LYS N N N N 313 LYS CA C N S 314 LYS C C N N 315 LYS O O N N 316 LYS CB C N N 317 LYS CG C N N 318 LYS CD C N N 319 LYS CE C N N 320 LYS NZ N N N 321 LYS OXT O N N 322 LYS H H N N 323 LYS H2 H N N 324 LYS HA H N N 325 LYS HB2 H N N 326 LYS HB3 H N N 327 LYS HG2 H N N 328 LYS HG3 H N N 329 LYS HD2 H N N 330 LYS HD3 H N N 331 LYS HE2 H N N 332 LYS HE3 H N N 333 LYS HZ1 H N N 334 LYS HZ2 H N N 335 LYS HZ3 H N N 336 LYS HXT H N N 337 MET N N N N 338 MET CA C N S 339 MET C C N N 340 MET O O N N 341 MET CB C N N 342 MET CG C N N 343 MET SD S N N 344 MET CE C N N 345 MET OXT O N N 346 MET H H N N 347 MET H2 H N N 348 MET HA H N N 349 MET HB2 H N N 350 MET HB3 H N N 351 MET HG2 H N N 352 MET HG3 H N N 353 MET HE1 H N N 354 MET HE2 H N N 355 MET HE3 H N N 356 MET HXT H N N 357 PHE N N N N 358 PHE CA C N S 359 PHE C C N N 360 PHE O O N N 361 PHE CB C N N 362 PHE CG C Y N 363 PHE CD1 C Y N 364 PHE CD2 C Y N 365 PHE CE1 C Y N 366 PHE CE2 C Y N 367 PHE CZ C Y N 368 PHE OXT O N N 369 PHE H H N N 370 PHE H2 H N N 371 PHE HA H N N 372 PHE HB2 H N N 373 PHE HB3 H N N 374 PHE HD1 H N N 375 PHE HD2 H N N 376 PHE HE1 H N N 377 PHE HE2 H N N 378 PHE HZ H N N 379 PHE HXT H N N 380 PRO N N N N 381 PRO CA C N S 382 PRO C C N N 383 PRO O O N N 384 PRO CB C N N 385 PRO CG C N N 386 PRO CD C N N 387 PRO OXT O N N 388 PRO H H N N 389 PRO HA H N N 390 PRO HB2 H N N 391 PRO HB3 H N N 392 PRO HG2 H N N 393 PRO HG3 H N N 394 PRO HD2 H N N 395 PRO HD3 H N N 396 PRO HXT H N N 397 SER N N N N 398 SER CA C N S 399 SER C C N N 400 SER O O N N 401 SER CB C N N 402 SER OG O N N 403 SER OXT O N N 404 SER H H N N 405 SER H2 H N N 406 SER HA H N N 407 SER HB2 H N N 408 SER HB3 H N N 409 SER HG H N N 410 SER HXT H N N 411 THR N N N N 412 THR CA C N S 413 THR C C N N 414 THR O O N N 415 THR CB C N R 416 THR OG1 O N N 417 THR CG2 C N N 418 THR OXT O N N 419 THR H H N N 420 THR H2 H N N 421 THR HA H N N 422 THR HB H N N 423 THR HG1 H N N 424 THR HG21 H N N 425 THR HG22 H N N 426 THR HG23 H N N 427 THR HXT H N N 428 TRP N N N N 429 TRP CA C N S 430 TRP C C N N 431 TRP O O N N 432 TRP CB C N N 433 TRP CG C Y N 434 TRP CD1 C Y N 435 TRP CD2 C Y N 436 TRP NE1 N Y N 437 TRP CE2 C Y N 438 TRP CE3 C Y N 439 TRP CZ2 C Y N 440 TRP CZ3 C Y N 441 TRP CH2 C Y N 442 TRP OXT O N N 443 TRP H H N N 444 TRP H2 H N N 445 TRP HA H N N 446 TRP HB2 H N N 447 TRP HB3 H N N 448 TRP HD1 H N N 449 TRP HE1 H N N 450 TRP HE3 H N N 451 TRP HZ2 H N N 452 TRP HZ3 H N N 453 TRP HH2 H N N 454 TRP HXT H N N 455 TYR N N N N 456 TYR CA C N S 457 TYR C C N N 458 TYR O O N N 459 TYR CB C N N 460 TYR CG C Y N 461 TYR CD1 C Y N 462 TYR CD2 C Y N 463 TYR CE1 C Y N 464 TYR CE2 C Y N 465 TYR CZ C Y N 466 TYR OH O N N 467 TYR OXT O N N 468 TYR H H N N 469 TYR H2 H N N 470 TYR HA H N N 471 TYR HB2 H N N 472 TYR HB3 H N N 473 TYR HD1 H N N 474 TYR HD2 H N N 475 TYR HE1 H N N 476 TYR HE2 H N N 477 TYR HH H N N 478 TYR HXT H N N 479 VAL N N N N 480 VAL CA C N S 481 VAL C C N N 482 VAL O O N N 483 VAL CB C N N 484 VAL CG1 C N N 485 VAL CG2 C N N 486 VAL OXT O N N 487 VAL H H N N 488 VAL H2 H N N 489 VAL HA H N N 490 VAL HB H N N 491 VAL HG11 H N N 492 VAL HG12 H N N 493 VAL HG13 H N N 494 VAL HG21 H N N 495 VAL HG22 H N N 496 VAL HG23 H N N 497 VAL HXT H N N 498 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TRP N CA sing N N 421 TRP N H sing N N 422 TRP N H2 sing N N 423 TRP CA C sing N N 424 TRP CA CB sing N N 425 TRP CA HA sing N N 426 TRP C O doub N N 427 TRP C OXT sing N N 428 TRP CB CG sing N N 429 TRP CB HB2 sing N N 430 TRP CB HB3 sing N N 431 TRP CG CD1 doub Y N 432 TRP CG CD2 sing Y N 433 TRP CD1 NE1 sing Y N 434 TRP CD1 HD1 sing N N 435 TRP CD2 CE2 doub Y N 436 TRP CD2 CE3 sing Y N 437 TRP NE1 CE2 sing Y N 438 TRP NE1 HE1 sing N N 439 TRP CE2 CZ2 sing Y N 440 TRP CE3 CZ3 doub Y N 441 TRP CE3 HE3 sing N N 442 TRP CZ2 CH2 doub Y N 443 TRP CZ2 HZ2 sing N N 444 TRP CZ3 CH2 sing Y N 445 TRP CZ3 HZ3 sing N N 446 TRP CH2 HH2 sing N N 447 TRP OXT HXT sing N N 448 TYR N CA sing N N 449 TYR N H sing N N 450 TYR N H2 sing N N 451 TYR CA C sing N N 452 TYR CA CB sing N N 453 TYR CA HA sing N N 454 TYR C O doub N N 455 TYR C OXT sing N N 456 TYR CB CG sing N N 457 TYR CB HB2 sing N N 458 TYR CB HB3 sing N N 459 TYR CG CD1 doub Y N 460 TYR CG CD2 sing Y N 461 TYR CD1 CE1 sing Y N 462 TYR CD1 HD1 sing N N 463 TYR CD2 CE2 doub Y N 464 TYR CD2 HD2 sing N N 465 TYR CE1 CZ doub Y N 466 TYR CE1 HE1 sing N N 467 TYR CE2 CZ sing Y N 468 TYR CE2 HE2 sing N N 469 TYR CZ OH sing N N 470 TYR OH HH sing N N 471 TYR OXT HXT sing N N 472 VAL N CA sing N N 473 VAL N H sing N N 474 VAL N H2 sing N N 475 VAL CA C sing N N 476 VAL CA CB sing N N 477 VAL CA HA sing N N 478 VAL C O doub N N 479 VAL C OXT sing N N 480 VAL CB CG1 sing N N 481 VAL CB CG2 sing N N 482 VAL CB HB sing N N 483 VAL CG1 HG11 sing N N 484 VAL CG1 HG12 sing N N 485 VAL CG1 HG13 sing N N 486 VAL CG2 HG21 sing N N 487 VAL CG2 HG22 sing N N 488 VAL CG2 HG23 sing N N 489 VAL OXT HXT sing N N 490 # _ndb_struct_conf_na.entry_id 8K8A _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 1 1_555 D DG 12 1_555 -0.292 -0.204 0.005 4.462 -3.286 1.840 1 C_DC1:DG12_D C 1 ? D 12 ? 19 1 1 C DA 2 1_555 D DT 11 1_555 -0.101 -0.255 0.069 -5.306 -7.174 5.220 2 C_DA2:DT11_D C 2 ? D 11 ? 20 1 1 C DT 3 1_555 D DA 10 1_555 -0.323 -0.116 -0.008 -1.122 -14.725 -2.945 3 C_DT3:DA10_D C 3 ? D 10 ? 20 1 1 C DT 4 1_555 D DA 9 1_555 0.088 -0.092 -0.207 1.497 -13.691 4.347 4 C_DT4:DA9_D C 4 ? D 9 ? 20 1 1 C DA 5 1_555 D DT 8 1_555 0.182 -0.115 0.035 7.867 -12.167 0.722 5 C_DA5:DT8_D C 5 ? D 8 ? 20 1 1 C DC 6 1_555 D DG 7 1_555 0.350 0.016 0.131 0.219 -10.642 3.941 6 C_DC6:DG7_D C 6 ? D 7 ? 19 1 1 C DG 7 1_555 D DC 6 1_555 -0.319 -0.107 0.039 -0.905 -13.317 0.304 7 C_DG7:DC6_D C 7 ? D 6 ? 19 1 1 C DT 8 1_555 D DA 5 1_555 -0.150 -0.069 0.040 -6.533 -13.703 -1.031 8 C_DT8:DA5_D C 8 ? D 5 ? 20 1 1 C DA 9 1_555 D DT 4 1_555 0.041 -0.153 -0.194 -2.134 -11.493 4.274 9 C_DA9:DT4_D C 9 ? D 4 ? 20 1 1 C DA 10 1_555 D DT 3 1_555 0.146 -0.198 0.142 -0.719 -13.589 1.347 10 C_DA10:DT3_D C 10 ? D 3 ? 20 1 1 C DT 11 1_555 D DA 2 1_555 0.397 -0.076 -0.060 7.337 -5.965 6.443 11 C_DT11:DA2_D C 11 ? D 2 ? 20 1 1 C DG 12 1_555 D DC 1 1_555 0.384 -0.304 0.034 0.297 -6.995 3.043 12 C_DG12:DC1_D C 12 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 1 1_555 D DG 12 1_555 C DA 2 1_555 D DT 11 1_555 0.279 -0.098 3.440 -0.163 5.291 46.506 -0.586 -0.365 3.408 6.676 0.206 46.790 1 CC_DC1DA2:DT11DG12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 C DA 2 1_555 D DT 11 1_555 C DT 3 1_555 D DA 10 1_555 -0.687 -0.709 3.180 0.103 3.359 27.804 -2.228 1.444 3.072 6.958 -0.213 28.002 2 CC_DA2DT3:DA10DT11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C DT 3 1_555 D DA 10 1_555 C DT 4 1_555 D DA 9 1_555 0.308 0.038 3.189 2.868 6.768 34.160 -0.942 -0.088 3.153 11.358 -4.814 34.919 3 CC_DT3DT4:DA9DA10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DT 4 1_555 D DA 9 1_555 C DA 5 1_555 D DT 8 1_555 -0.607 1.101 3.208 -3.793 7.827 37.695 0.677 0.439 3.404 11.921 5.776 38.650 4 CC_DT4DA5:DT8DA9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 C DA 5 1_555 D DT 8 1_555 C DC 6 1_555 D DG 7 1_555 0.292 -0.872 3.455 -1.087 3.488 30.676 -2.342 -0.768 3.326 6.564 2.045 30.888 5 CC_DA5DC6:DG7DT8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 C DC 6 1_555 D DG 7 1_555 C DG 7 1_555 D DC 6 1_555 -0.190 0.352 3.338 0.289 9.553 34.407 -0.861 0.354 3.313 15.775 -0.477 35.671 6 CC_DC6DG7:DC6DG7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 C DG 7 1_555 D DC 6 1_555 C DT 8 1_555 D DA 5 1_555 -0.206 -0.826 3.413 0.387 4.395 30.262 -2.459 0.469 3.260 8.362 -0.736 30.575 7 CC_DG7DT8:DA5DC6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 C DT 8 1_555 D DA 5 1_555 C DA 9 1_555 D DT 4 1_555 0.882 1.332 3.242 4.421 6.687 40.326 1.144 -0.759 3.484 9.585 -6.338 41.083 8 CC_DT8DA9:DT4DA5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 C DA 9 1_555 D DT 4 1_555 C DA 10 1_555 D DT 3 1_555 -0.453 0.112 3.168 -4.752 6.594 34.496 -0.768 0.058 3.168 10.931 7.878 35.412 9 CC_DA9DA10:DT3DT4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 C DA 10 1_555 D DT 3 1_555 C DT 11 1_555 D DA 2 1_555 0.401 -0.645 3.123 1.708 3.817 28.283 -2.126 -0.445 3.030 7.759 -3.471 28.584 10 CC_DA10DT11:DA2DT3_DD C 10 ? D 3 ? C 11 ? D 2 ? 1 C DT 11 1_555 D DA 2 1_555 C DG 12 1_555 D DC 1 1_555 -0.079 -0.085 3.405 0.285 4.888 41.978 -0.639 0.140 3.375 6.796 -0.396 42.250 11 CC_DT11DG12:DC1DA2_DD C 11 ? D 2 ? C 12 ? D 1 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'solved apo structure from this study' # _atom_sites.entry_id 8K8A _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.013508 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010315 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025674 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_