HEADER OXIDOREDUCTASE 03-AUG-23 8KB3 TITLE SUPEROXIDE DISMUTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE [MN]; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM STR. LT2; SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 ATCC: 14028S; SOURCE 6 GENE: SODA, STM4055; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DESTROYS SUPEROXIDE ANION RADICALS WHICH ARE NORMALLY PRODUCED WITHIN KEYWDS 2 THE CELLS AND WHICH ARE TOXIC TO BIOLOGICAL SYSTEMS, DIMER., KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.ZHAI,B.Q.LI,H.H.JIA REVDAT 1 07-AUG-24 8KB3 0 JRNL AUTH L.ZHAI,B.Q.LI,H.H.JIA JRNL TITL YDIU REGULATES SALMONELLA OXIDATIVE STRESS BY UMPYLATION OF JRNL TITL 2 SODA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 50645 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.2800 - 4.2300 0.95 2780 144 0.1553 0.1873 REMARK 3 2 4.2300 - 3.3600 0.99 2822 140 0.1520 0.1749 REMARK 3 3 3.3600 - 2.9300 0.99 2797 138 0.1798 0.1897 REMARK 3 4 2.9300 - 2.6700 0.93 2648 125 0.1859 0.2151 REMARK 3 5 2.6700 - 2.4800 0.97 2733 151 0.1763 0.2117 REMARK 3 6 2.4800 - 2.3300 0.98 2728 156 0.1821 0.2024 REMARK 3 7 2.3300 - 2.2100 0.98 2782 131 0.1778 0.2406 REMARK 3 8 2.2100 - 2.1200 0.98 2711 157 0.1861 0.2216 REMARK 3 9 2.1200 - 2.0400 0.98 2755 140 0.1687 0.1940 REMARK 3 10 2.0400 - 1.9600 0.91 2524 142 0.1719 0.1990 REMARK 3 11 1.9600 - 1.9000 0.95 2657 151 0.1692 0.2076 REMARK 3 12 1.9000 - 1.8500 0.97 2693 132 0.1959 0.2226 REMARK 3 13 1.8500 - 1.8000 0.97 2720 145 0.1816 0.2203 REMARK 3 14 1.8000 - 1.7600 0.96 2700 150 0.1769 0.2430 REMARK 3 15 1.7600 - 1.7200 0.94 2591 150 0.1822 0.2373 REMARK 3 16 1.7200 - 1.6800 0.93 2524 180 0.1813 0.2392 REMARK 3 17 1.6800 - 1.6500 0.89 2541 117 0.1846 0.2022 REMARK 3 18 1.6500 - 1.6200 0.87 2382 108 0.1959 0.2224 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.143 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.862 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3382 REMARK 3 ANGLE : 1.037 4582 REMARK 3 CHIRALITY : 0.057 480 REMARK 3 PLANARITY : 0.007 589 REMARK 3 DIHEDRAL : 6.983 450 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8KB3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 10-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300039989. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.8 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50682 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.610 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.16600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1 M BIS-TRIS REMARK 280 PH 6.5, 25% W/V POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.56400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ASN A 45 CG OD1 ND2 REMARK 470 LEU A 165 CD1 REMARK 470 MET B 1 CG SD CE REMARK 470 ASP B 62 CG OD1 OD2 REMARK 470 ARG B 105 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 LEU B 165 CD1 REMARK 470 LYS B 187 CG CD CE NZ REMARK 470 LYS B 206 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 428 O HOH A 578 2.14 REMARK 500 OH TYR B 12 O HOH B 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 405 O HOH A 445 2655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 30 -64.00 -109.62 REMARK 500 LYS A 90 138.18 -171.90 REMARK 500 ASN A 146 -124.77 56.75 REMARK 500 TYR A 174 -2.93 -143.26 REMARK 500 GLN A 179 -129.59 41.16 REMARK 500 PRO B 9 2.30 -69.87 REMARK 500 LYS B 30 -62.89 -107.70 REMARK 500 LYS B 90 134.47 -174.12 REMARK 500 ASN B 146 -125.75 57.15 REMARK 500 TYR B 174 -3.38 -144.34 REMARK 500 GLN B 179 -126.17 37.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 304 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 27 NE2 REMARK 620 2 HIS A 82 NE2 82.0 REMARK 620 3 ASP A 168 OD2 77.9 117.2 REMARK 620 4 HIS A 172 NE2 101.5 124.6 117.6 REMARK 620 5 HOH A 457 O 167.7 99.4 90.7 87.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 27 NE2 REMARK 620 2 HIS B 82 NE2 88.1 REMARK 620 3 ASP B 168 OD2 82.2 105.6 REMARK 620 4 HIS B 172 NE2 98.6 135.1 119.2 REMARK 620 5 HOH B 462 O 169.8 95.1 87.6 85.9 REMARK 620 N 1 2 3 4 DBREF 8KB3 A 1 206 UNP P43019 SODM_SALTY 1 206 DBREF 8KB3 B 1 206 UNP P43019 SODM_SALTY 1 206 SEQRES 1 A 206 MET SER TYR THR LEU PRO SER LEU PRO TYR ALA TYR ASP SEQRES 2 A 206 ALA LEU GLU PRO HIS PHE ASP LYS GLN THR MET GLU ILE SEQRES 3 A 206 HIS HIS THR LYS HIS HIS GLN THR TYR VAL ASN ASN ALA SEQRES 4 A 206 ASN ALA ALA LEU GLU ASN LEU PRO GLU PHE ALA SER LEU SEQRES 5 A 206 PRO VAL GLU GLU LEU ILE THR LYS LEU ASP GLN VAL PRO SEQRES 6 A 206 ALA ASP LYS LYS THR VAL LEU ARG ASN ASN ALA GLY GLY SEQRES 7 A 206 HIS ALA ASN HIS SER LEU PHE TRP LYS GLY LEU LYS LYS SEQRES 8 A 206 GLY THR THR LEU GLN GLY ASP LEU LYS ALA ALA ILE GLU SEQRES 9 A 206 ARG ASP PHE GLY SER VAL ASP ASN PHE LYS ALA GLU PHE SEQRES 10 A 206 GLU LYS ALA ALA ALA THR ARG PHE GLY SER GLY TRP ALA SEQRES 11 A 206 TRP LEU VAL LEU LYS GLY ASP LYS LEU ALA VAL VAL SER SEQRES 12 A 206 THR ALA ASN GLN ASP SER PRO LEU MET GLY GLU ALA ILE SEQRES 13 A 206 SER GLY ALA SER GLY PHE PRO ILE LEU GLY LEU ASP VAL SEQRES 14 A 206 TRP GLU HIS ALA TYR TYR LEU LYS PHE GLN ASN ARG ARG SEQRES 15 A 206 PRO ASP TYR ILE LYS GLU PHE TRP ASN VAL VAL ASN TRP SEQRES 16 A 206 ASP GLU ALA ALA ALA ARG PHE ALA ALA LYS LYS SEQRES 1 B 206 MET SER TYR THR LEU PRO SER LEU PRO TYR ALA TYR ASP SEQRES 2 B 206 ALA LEU GLU PRO HIS PHE ASP LYS GLN THR MET GLU ILE SEQRES 3 B 206 HIS HIS THR LYS HIS HIS GLN THR TYR VAL ASN ASN ALA SEQRES 4 B 206 ASN ALA ALA LEU GLU ASN LEU PRO GLU PHE ALA SER LEU SEQRES 5 B 206 PRO VAL GLU GLU LEU ILE THR LYS LEU ASP GLN VAL PRO SEQRES 6 B 206 ALA ASP LYS LYS THR VAL LEU ARG ASN ASN ALA GLY GLY SEQRES 7 B 206 HIS ALA ASN HIS SER LEU PHE TRP LYS GLY LEU LYS LYS SEQRES 8 B 206 GLY THR THR LEU GLN GLY ASP LEU LYS ALA ALA ILE GLU SEQRES 9 B 206 ARG ASP PHE GLY SER VAL ASP ASN PHE LYS ALA GLU PHE SEQRES 10 B 206 GLU LYS ALA ALA ALA THR ARG PHE GLY SER GLY TRP ALA SEQRES 11 B 206 TRP LEU VAL LEU LYS GLY ASP LYS LEU ALA VAL VAL SER SEQRES 12 B 206 THR ALA ASN GLN ASP SER PRO LEU MET GLY GLU ALA ILE SEQRES 13 B 206 SER GLY ALA SER GLY PHE PRO ILE LEU GLY LEU ASP VAL SEQRES 14 B 206 TRP GLU HIS ALA TYR TYR LEU LYS PHE GLN ASN ARG ARG SEQRES 15 B 206 PRO ASP TYR ILE LYS GLU PHE TRP ASN VAL VAL ASN TRP SEQRES 16 B 206 ASP GLU ALA ALA ALA ARG PHE ALA ALA LYS LYS HET GOL A 301 6 HET EDO A 302 4 HET GOL A 303 6 HET MN A 304 1 HET SO4 A 305 5 HET SO4 A 306 5 HET EDO A 307 4 HET EDO A 308 4 HET EDO B 301 4 HET GOL B 302 6 HET MN B 303 1 HET SO4 B 304 5 HET SO4 B 305 5 HET EDO B 306 4 HET EDO B 307 4 HET EDO B 308 4 HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 4 EDO 7(C2 H6 O2) FORMUL 6 MN 2(MN 2+) FORMUL 7 SO4 4(O4 S 2-) FORMUL 19 HOH *438(H2 O) HELIX 1 AA1 ASP A 20 LYS A 30 1 11 HELIX 2 AA2 LYS A 30 GLU A 44 1 15 HELIX 3 AA3 LEU A 46 SER A 51 1 6 HELIX 4 AA4 PRO A 53 ILE A 58 1 6 HELIX 5 AA5 THR A 59 VAL A 64 5 6 HELIX 6 AA6 PRO A 65 ASP A 67 5 3 HELIX 7 AA7 LYS A 68 GLY A 88 1 21 HELIX 8 AA8 GLN A 96 GLY A 108 1 13 HELIX 9 AA9 SER A 109 ARG A 124 1 16 HELIX 10 AB1 SER A 149 MET A 152 5 4 HELIX 11 AB2 GLY A 153 GLY A 158 1 6 HELIX 12 AB3 TRP A 170 ALA A 173 5 4 HELIX 13 AB4 TYR A 174 GLN A 179 1 6 HELIX 14 AB5 ARG A 181 VAL A 193 1 13 HELIX 15 AB6 ASN A 194 LYS A 206 1 13 HELIX 16 AB7 ASP B 20 LYS B 30 1 11 HELIX 17 AB8 LYS B 30 GLU B 44 1 15 HELIX 18 AB9 LEU B 46 SER B 51 1 6 HELIX 19 AC1 PRO B 53 ILE B 58 1 6 HELIX 20 AC2 THR B 59 VAL B 64 5 6 HELIX 21 AC3 PRO B 65 GLY B 88 1 24 HELIX 22 AC4 GLN B 96 GLY B 108 1 13 HELIX 23 AC5 SER B 109 ARG B 124 1 16 HELIX 24 AC6 SER B 149 MET B 152 5 4 HELIX 25 AC7 GLY B 153 GLY B 158 1 6 HELIX 26 AC8 TRP B 170 ALA B 173 5 4 HELIX 27 AC9 TYR B 174 GLN B 179 1 6 HELIX 28 AD1 ARG B 181 TRP B 190 1 10 HELIX 29 AD2 ASN B 194 LYS B 206 1 13 SHEET 1 AA1 3 LYS A 138 ALA A 145 0 SHEET 2 AA1 3 GLY A 128 LYS A 135 -1 N VAL A 133 O ALA A 140 SHEET 3 AA1 3 PHE A 162 ASP A 168 -1 O LEU A 167 N ALA A 130 SHEET 1 AA2 3 LYS B 138 ALA B 145 0 SHEET 2 AA2 3 GLY B 128 LYS B 135 -1 N TRP B 131 O VAL B 142 SHEET 3 AA2 3 PHE B 162 ASP B 168 -1 O ILE B 164 N LEU B 132 LINK CG GLU B 55 C1 EDO B 306 1555 1555 1.50 LINK NE2 HIS A 27 MN MN A 304 1555 1555 2.14 LINK NE2 HIS A 82 MN MN A 304 1555 1555 2.24 LINK OD2 ASP A 168 MN MN A 304 1555 1555 1.95 LINK NE2 HIS A 172 MN MN A 304 1555 1555 2.10 LINK MN MN A 304 O HOH A 457 1555 1555 1.91 LINK NE2 HIS B 27 MN MN B 303 1555 1555 2.10 LINK NE2 HIS B 82 MN MN B 303 1555 1555 2.07 LINK OD2 ASP B 168 MN MN B 303 1555 1555 1.88 LINK NE2 HIS B 172 MN MN B 303 1555 1555 2.17 LINK MN MN B 303 O HOH B 462 1555 1555 1.99 CISPEP 1 GLU A 16 PRO A 17 0 6.94 CISPEP 2 GLU B 16 PRO B 17 0 4.05 CRYST1 50.026 45.128 92.508 90.00 90.16 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019990 0.000000 0.000056 0.00000 SCALE2 0.000000 0.022159 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010810 0.00000