HEADER VIRAL PROTEIN 04-AUG-23 8KBF TITLE STRUCTURE OF CBTAD1 COMPLEXED WITH 1',3'-CADPR AND CA3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THOERIS ANTI-DEFENSE 1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: (2-ACETYL-5-METHYLANILINO)(2,6-DIBROMOPHENYL)ACETAMIDE; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM; SOURCE 3 ORGANISM_TAXID: 1491; SOURCE 4 GENE: TAD1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630 KEYWDS VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.XIAO,Y.FENG REVDAT 4 04-DEC-24 8KBF 1 JRNL REMARK REVDAT 3 13-NOV-24 8KBF 1 JRNL REVDAT 2 06-NOV-24 8KBF 1 JRNL REVDAT 1 07-AUG-24 8KBF 0 JRNL AUTH D.LI,Y.XIAO,I.FEDOROVA,W.XIONG,Y.WANG,X.LIU,E.HUITING,J.REN, JRNL AUTH 2 Z.GAO,X.ZHAO,X.CAO,Y.ZHANG,J.BONDY-DENOMY,Y.FENG JRNL TITL SINGLE PHAGE PROTEINS SEQUESTER SIGNALS FROM TIR AND JRNL TITL 2 CGAS-LIKE ENZYMES. JRNL REF NATURE V. 635 719 2024 JRNL REFN ESSN 1476-4687 JRNL PMID 39478223 JRNL DOI 10.1038/S41586-024-08122-4 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 15411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 755 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8000 - 3.9500 1.00 3042 155 0.1676 0.2051 REMARK 3 2 3.9500 - 3.1400 1.00 2917 163 0.2174 0.2449 REMARK 3 3 3.1400 - 2.7400 1.00 2933 139 0.2403 0.3385 REMARK 3 4 2.7400 - 2.4900 1.00 2912 138 0.2485 0.3283 REMARK 3 5 2.4900 - 2.3100 1.00 2852 160 0.2837 0.3627 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2307 REMARK 3 ANGLE : 1.803 3139 REMARK 3 CHIRALITY : 0.091 338 REMARK 3 PLANARITY : 0.008 375 REMARK 3 DIHEDRAL : 25.449 487 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8KBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300039771. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15435 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 35.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 40.00 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 41.10 REMARK 200 R MERGE FOR SHELL (I) : 2.30500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7UAW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.2 M AMMONIUM SULFATE, 0.1 M CITRATE REMARK 280 PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 50.63500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.63500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.63500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.63500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.63500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.63500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 50.63500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 50.63500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 50.63500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 50.63500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 50.63500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 50.63500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 50.63500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 50.63500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 50.63500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 50.63500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 50.63500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 50.63500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 GLN A -2 REMARK 465 ASP A -1 REMARK 465 MET B -15 REMARK 465 GLY B -14 REMARK 465 SER B -13 REMARK 465 SER B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -3 REMARK 465 GLN B -2 REMARK 465 ASP B -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 314 O HOH B 326 1.84 REMARK 500 O5 OJC A 201 O HOH A 301 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 A C 1 C4 A C 1 C5 0.081 REMARK 500 A C 1 C5 A C 1 C6 0.072 REMARK 500 A C 1 C5 A C 1 N7 -0.045 REMARK 500 A C 1 N7 A C 1 C8 0.044 REMARK 500 A C 1 N9 A C 1 C4 -0.049 REMARK 500 A C 2 C4 A C 2 C5 0.078 REMARK 500 A C 2 C5 A C 2 C6 0.069 REMARK 500 A C 2 C5 A C 2 N7 -0.045 REMARK 500 A C 2 N7 A C 2 C8 0.043 REMARK 500 A C 2 N9 A C 2 C4 -0.053 REMARK 500 A C 3 C4 A C 3 C5 0.081 REMARK 500 A C 3 C5 A C 3 C6 0.072 REMARK 500 A C 3 C5 A C 3 N7 -0.045 REMARK 500 A C 3 N7 A C 3 C8 0.043 REMARK 500 A C 3 N9 A C 3 C4 -0.047 REMARK 500 A D 1 C4 A D 1 C5 0.080 REMARK 500 A D 1 C5 A D 1 C6 0.073 REMARK 500 A D 1 C5 A D 1 N7 -0.045 REMARK 500 A D 1 N7 A D 1 C8 0.045 REMARK 500 A D 1 N9 A D 1 C4 -0.050 REMARK 500 A D 2 C4 A D 2 C5 0.076 REMARK 500 A D 2 C5 A D 2 C6 0.070 REMARK 500 A D 2 C5 A D 2 N7 -0.051 REMARK 500 A D 2 N9 A D 2 C4 -0.047 REMARK 500 A D 3 C4 A D 3 C5 0.080 REMARK 500 A D 3 C5 A D 3 C6 0.073 REMARK 500 A D 3 C5 A D 3 N7 -0.045 REMARK 500 A D 3 N7 A D 3 C8 0.045 REMARK 500 A D 3 N9 A D 3 C4 -0.050 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 A C 1 N1 - C2 - N3 ANGL. DEV. = -5.7 DEGREES REMARK 500 A C 1 C2 - N3 - C4 ANGL. DEV. = 10.1 DEGREES REMARK 500 A C 1 N3 - C4 - C5 ANGL. DEV. = -7.5 DEGREES REMARK 500 A C 1 C4 - C5 - N7 ANGL. DEV. = -4.0 DEGREES REMARK 500 A C 1 C5 - N7 - C8 ANGL. DEV. = 3.6 DEGREES REMARK 500 A C 1 N7 - C8 - N9 ANGL. DEV. = -3.3 DEGREES REMARK 500 A C 1 C8 - N9 - C4 ANGL. DEV. = 3.4 DEGREES REMARK 500 A C 1 N3 - C4 - N9 ANGL. DEV. = 7.3 DEGREES REMARK 500 A C 2 C6 - N1 - C2 ANGL. DEV. = 3.9 DEGREES REMARK 500 A C 2 N1 - C2 - N3 ANGL. DEV. = -6.2 DEGREES REMARK 500 A C 2 C2 - N3 - C4 ANGL. DEV. = 9.8 DEGREES REMARK 500 A C 2 N3 - C4 - C5 ANGL. DEV. = -7.0 DEGREES REMARK 500 A C 2 C4 - C5 - N7 ANGL. DEV. = -4.0 DEGREES REMARK 500 A C 2 C5 - N7 - C8 ANGL. DEV. = 3.6 DEGREES REMARK 500 A C 2 N7 - C8 - N9 ANGL. DEV. = -3.5 DEGREES REMARK 500 A C 2 C8 - N9 - C4 ANGL. DEV. = 3.7 DEGREES REMARK 500 A C 2 N3 - C4 - N9 ANGL. DEV. = 6.9 DEGREES REMARK 500 A C 2 C6 - C5 - N7 ANGL. DEV. = 4.4 DEGREES REMARK 500 A C 3 N1 - C2 - N3 ANGL. DEV. = -5.7 DEGREES REMARK 500 A C 3 C2 - N3 - C4 ANGL. DEV. = 10.1 DEGREES REMARK 500 A C 3 N3 - C4 - C5 ANGL. DEV. = -7.7 DEGREES REMARK 500 A C 3 C4 - C5 - N7 ANGL. DEV. = -4.0 DEGREES REMARK 500 A C 3 C5 - N7 - C8 ANGL. DEV. = 3.6 DEGREES REMARK 500 A C 3 N7 - C8 - N9 ANGL. DEV. = -3.1 DEGREES REMARK 500 A C 3 C8 - N9 - C4 ANGL. DEV. = 3.3 DEGREES REMARK 500 A C 3 N3 - C4 - N9 ANGL. DEV. = 7.4 DEGREES REMARK 500 A D 1 N1 - C2 - N3 ANGL. DEV. = -5.8 DEGREES REMARK 500 A D 1 C2 - N3 - C4 ANGL. DEV. = 10.1 DEGREES REMARK 500 A D 1 N3 - C4 - C5 ANGL. DEV. = -7.5 DEGREES REMARK 500 A D 1 C4 - C5 - N7 ANGL. DEV. = -4.2 DEGREES REMARK 500 A D 1 C5 - N7 - C8 ANGL. DEV. = 3.7 DEGREES REMARK 500 A D 1 N7 - C8 - N9 ANGL. DEV. = -3.2 DEGREES REMARK 500 A D 1 C8 - N9 - C4 ANGL. DEV. = 3.2 DEGREES REMARK 500 A D 1 N3 - C4 - N9 ANGL. DEV. = 7.0 DEGREES REMARK 500 A D 1 C6 - C5 - N7 ANGL. DEV. = 4.4 DEGREES REMARK 500 A D 2 N1 - C2 - N3 ANGL. DEV. = -5.5 DEGREES REMARK 500 A D 2 C2 - N3 - C4 ANGL. DEV. = 10.0 DEGREES REMARK 500 A D 2 N3 - C4 - C5 ANGL. DEV. = -7.8 DEGREES REMARK 500 A D 2 C4 - C5 - N7 ANGL. DEV. = -4.5 DEGREES REMARK 500 A D 2 C5 - N7 - C8 ANGL. DEV. = 4.6 DEGREES REMARK 500 A D 2 N7 - C8 - N9 ANGL. DEV. = -4.1 DEGREES REMARK 500 A D 2 C8 - N9 - C4 ANGL. DEV. = 3.8 DEGREES REMARK 500 A D 2 N3 - C4 - N9 ANGL. DEV. = 7.7 DEGREES REMARK 500 A D 2 C6 - C5 - N7 ANGL. DEV. = 4.2 DEGREES REMARK 500 A D 3 N1 - C2 - N3 ANGL. DEV. = -5.8 DEGREES REMARK 500 A D 3 C2 - N3 - C4 ANGL. DEV. = 10.1 DEGREES REMARK 500 A D 3 N3 - C4 - C5 ANGL. DEV. = -7.5 DEGREES REMARK 500 A D 3 C4 - C5 - N7 ANGL. DEV. = -4.2 DEGREES REMARK 500 A D 3 C5 - N7 - C8 ANGL. DEV. = 3.6 DEGREES REMARK 500 A D 3 N7 - C8 - N9 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 53 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 61 62.86 63.75 REMARK 500 PHE A 87 55.29 -105.90 REMARK 500 REMARK 500 REMARK: NULL DBREF 8KBF A 1 124 UNP P0DW58 TAD1_CLOBO 1 124 DBREF 8KBF B 1 124 UNP P0DW58 TAD1_CLOBO 1 124 DBREF 8KBF C 1 3 PDB 8KBF 8KBF 1 3 DBREF 8KBF D 1 3 PDB 8KBF 8KBF 1 3 SEQADV 8KBF MET A -13 UNP P0DW58 INITIATING METHIONINE SEQADV 8KBF GLY A -12 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF SER A -11 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF SER A -10 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS A -9 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS A -8 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS A -7 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS A -6 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS A -5 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS A -4 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF SER A -3 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF GLN A -2 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF ASP A -1 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF PRO A 0 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF MET B -15 UNP P0DW58 INITIATING METHIONINE SEQADV 8KBF GLY B -14 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF SER B -13 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF SER B -12 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS B -11 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS B -10 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS B -9 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS B -8 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS B -7 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF HIS B -6 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF SER B -3 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF GLN B -2 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF ASP B -1 UNP P0DW58 EXPRESSION TAG SEQADV 8KBF PRO B 0 UNP P0DW58 EXPRESSION TAG SEQRES 1 A 138 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 138 PRO MET LYS GLU LEU SER THR ILE GLN LYS ARG GLU LYS SEQRES 3 A 138 LEU ASN THR VAL GLU ARG ILE GLY SER GLU GLY PRO GLY SEQRES 4 A 138 GLY ALA TYR HIS GLU TYR VAL ILE LYS SER ASN SER MET SEQRES 5 A 138 ASP SER GLN GLY ASN TYR ASP VAL TYR GLU THR ILE LYS SEQRES 6 A 138 PHE GLN LYS GLY ALA ARG LYS GLU GLU LYS SER GLN HIS SEQRES 7 A 138 GLY VAL ILE ASP SER ASP LEU LEU GLU ILE VAL ARG ASP SEQRES 8 A 138 ARG LEU LYS SER PHE GLN ALA GLY PRO PHE SER SER ARG SEQRES 9 A 138 GLU ASN ALA CYS ALA LEU THR HIS VAL GLU GLU ALA LEU SEQRES 10 A 138 MET TRP MET ASN ARG ARG VAL GLU ASP ARG ILE GLU ARG SEQRES 11 A 138 ASN VAL LEU GLY THR ASN THR LYS SEQRES 1 B 138 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 B 138 PRO MET LYS GLU LEU SER THR ILE GLN LYS ARG GLU LYS SEQRES 3 B 138 LEU ASN THR VAL GLU ARG ILE GLY SER GLU GLY PRO GLY SEQRES 4 B 138 GLY ALA TYR HIS GLU TYR VAL ILE LYS SER ASN SER MET SEQRES 5 B 138 ASP SER GLN GLY ASN TYR ASP VAL TYR GLU THR ILE LYS SEQRES 6 B 138 PHE GLN LYS GLY ALA ARG LYS GLU GLU LYS SER GLN HIS SEQRES 7 B 138 GLY VAL ILE ASP SER ASP LEU LEU GLU ILE VAL ARG ASP SEQRES 8 B 138 ARG LEU LYS SER PHE GLN ALA GLY PRO PHE SER SER ARG SEQRES 9 B 138 GLU ASN ALA CYS ALA LEU THR HIS VAL GLU GLU ALA LEU SEQRES 10 B 138 MET TRP MET ASN ARG ARG VAL GLU ASP ARG ILE GLU ARG SEQRES 11 B 138 ASN VAL LEU GLY THR ASN THR LYS SEQRES 1 C 3 A A A SEQRES 1 D 3 A A A HET OJC A 201 35 HET OJC B 201 35 HETNAM OJC (2R,3R,3AS,5S,6R,7S,8R,11R,13S,15AR)-2-(6-AMINO-9H- HETNAM 2 OJC PURIN-9-YL)-3,6,7,11,13-PENTAHYDROXYOCTAHYDRO-2H,5H, HETNAM 3 OJC 11H,13H-5,8-EPOXY-11LAMBDA~5~,13LAMBDA~5~-FURO[2,3- HETNAM 4 OJC G][1,3,5,9,2,4]TETRAOXADIPHOSPHACYCLOTETRADECINE-11, HETNAM 5 OJC 13-DIONE FORMUL 5 OJC 2(C15 H21 N5 O13 P2) FORMUL 7 HOH *53(H2 O) HELIX 1 AA1 GLY A 23 ALA A 27 5 5 HELIX 2 AA2 ILE A 67 GLY A 85 1 19 HELIX 3 AA3 SER A 89 ARG A 116 1 28 HELIX 4 AA4 GLY B 23 ALA B 27 5 5 HELIX 5 AA5 ILE B 67 GLY B 85 1 19 HELIX 6 AA6 SER B 89 ARG B 116 1 28 SHEET 1 AA1 3 ASN A 14 ILE A 19 0 SHEET 2 AA1 3 GLU A 30 SER A 35 -1 O GLU A 30 N ILE A 19 SHEET 3 AA1 3 TYR A 47 LYS A 51 -1 O GLU A 48 N ILE A 33 SHEET 1 AA2 3 ASN B 14 ILE B 19 0 SHEET 2 AA2 3 GLU B 30 SER B 35 -1 O LYS B 34 N THR B 15 SHEET 3 AA2 3 TYR B 47 LYS B 51 -1 O GLU B 48 N ILE B 33 CRYST1 101.270 101.270 101.270 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009875 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009875 0.00000