HEADER IMMUNE SYSTEM 11-AUG-23 8KEI TITLE CRYO-EM STRUCTURE OF NADPH OXIDASE 2 IN COMPLEX WITH P22PHOX AND EROS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME B-245 LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME B(558) ALPHA CHAIN,CYTOCHROME B558 SUBUNIT ALPHA, COMPND 5 NEUTROPHIL CYTOCHROME B 22 KDA POLYPEPTIDE,SUPEROXIDE-GENERATING COMPND 6 NADPH OXIDASE LIGHT CHAIN SUBUNIT,P22 PHAGOCYTE B-CYTOCHROME,P22- COMPND 7 PHOX,P22PHOX; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CYTOCHROME B-245 HEAVY CHAIN; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: CGD91-PHOX,CYTOCHROME B(558) SUBUNIT BETA,CYTOCHROME B558 COMPND 13 SUBUNIT BETA,HEME-BINDING MEMBRANE GLYCOPROTEIN GP91PHOX,NADPH COMPND 14 OXIDASE 2,NEUTROPHIL CYTOCHROME B 91 KDA POLYPEPTIDE,SUPEROXIDE- COMPND 15 GENERATING NADPH OXIDASE HEAVY CHAIN SUBUNIT,GP91-1,GP91-PHOX,P22 COMPND 16 PHAGOCYTE B-CYTOCHROME; COMPND 17 EC: 1.-.-.-; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 3; COMPND 20 MOLECULE: MONOCLONAL ANTIBODY 7G5 HEAVY CHAIN; COMPND 21 CHAIN: C; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 4; COMPND 24 MOLECULE: CYTOCHROME B-245 CHAPERONE 1; COMPND 25 CHAIN: D; COMPND 26 SYNONYM: ESSENTIAL FOR REACTIVE OXYGEN SPECIES PROTEIN,EROS; COMPND 27 ENGINEERED: YES; COMPND 28 MOL_ID: 5; COMPND 29 MOLECULE: MONOCLONAL ANTIBODY 7G5 LIGHT CHAIN; COMPND 30 CHAIN: E; COMPND 31 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CYBA; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: CYBB, NOX2; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 19 ORGANISM_COMMON: RABBIT; SOURCE 20 ORGANISM_TAXID: 9986; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 24 MOL_ID: 4; SOURCE 25 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 26 ORGANISM_COMMON: HUMAN; SOURCE 27 ORGANISM_TAXID: 9606; SOURCE 28 GENE: CYBC1, C17ORF62, EROS; SOURCE 29 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 30 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 32 MOL_ID: 5; SOURCE 33 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 34 ORGANISM_COMMON: RABBIT; SOURCE 35 ORGANISM_TAXID: 9986; SOURCE 36 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 37 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 38 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS NADPH OXIDASE, IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR S.Y.LIANG,A.J.LIU,Y.Z.LIU,R.D.YE REVDAT 1 22-MAY-24 8KEI 0 JRNL AUTH S.Y.LIANG,A.J.LIU,Y.Z.LIU,R.D.YE JRNL TITL CRYO-EM STRUCTURE OF NADPH OXIDASE 2 IN COMPLEX WITH P22PHOX JRNL TITL 2 AND EROS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.560 REMARK 3 NUMBER OF PARTICLES : 131926 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8KEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 23-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300039576. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : NADPH OXIDASE 2 IN COMPLEX WITH REMARK 245 CYTOCHROME B-245 LIGHT CHAIN, REMARK 245 CYTOCHROME B-245 CHAPERONE 1 REMARK 245 AND A MONOCLONAL ANTIBODY REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5200.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 373 REMARK 465 GLN B 374 REMARK 465 GLU B 375 REMARK 465 PHE B 376 REMARK 465 GLN B 377 REMARK 465 ASP B 378 REMARK 465 ALA B 379 REMARK 465 TRP B 380 REMARK 465 ASP B 484 REMARK 465 GLU B 485 REMARK 465 SER B 486 REMARK 465 GLN B 487 REMARK 465 ALA B 488 REMARK 465 ASN B 489 REMARK 465 HIS B 490 REMARK 465 PHE B 491 REMARK 465 ALA B 492 REMARK 465 VAL B 493 REMARK 465 HIS B 494 REMARK 465 HIS B 495 REMARK 465 ASP B 496 REMARK 465 GLU B 497 REMARK 465 GLU B 498 REMARK 465 LYS B 499 REMARK 465 ASP B 500 REMARK 465 VAL B 501 REMARK 465 ILE B 502 REMARK 465 THR B 503 REMARK 465 GLY B 504 REMARK 465 LEU B 505 REMARK 465 LYS B 506 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS C 51 CA - CB - SG ANGL. DEV. = 7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 56 49.68 -93.57 REMARK 500 LEU A 79 44.98 -88.64 REMARK 500 ARG A 85 11.00 53.71 REMARK 500 THR A 107 12.70 59.69 REMARK 500 ASP B 95 42.92 -86.58 REMARK 500 ILE B 160 -65.08 -122.17 REMARK 500 LYS B 161 165.21 179.46 REMARK 500 GLU B 164 -8.90 72.41 REMARK 500 THR B 196 -5.34 74.03 REMARK 500 GLU B 225 -8.96 72.04 REMARK 500 LYS B 247 52.71 -91.85 REMARK 500 MET B 268 12.38 -140.80 REMARK 500 PHE B 305 -129.99 61.23 REMARK 500 GLU B 320 -144.08 59.96 REMARK 500 LEU B 335 30.01 -141.43 REMARK 500 THR B 343 58.28 -96.62 REMARK 500 GLU B 347 18.35 50.93 REMARK 500 ALA B 409 137.56 -172.34 REMARK 500 THR B 448 37.47 -99.97 REMARK 500 PHE B 473 -63.56 -90.50 REMARK 500 LEU B 474 -127.97 48.37 REMARK 500 ASN B 518 -4.04 68.20 REMARK 500 PRO B 528 155.31 -44.43 REMARK 500 PRO B 558 40.84 -79.49 REMARK 500 LYS B 567 -140.12 59.03 REMARK 500 ILE C 49 -63.40 -106.44 REMARK 500 ASP C 56 -146.36 59.15 REMARK 500 SER C 139 52.23 -91.02 REMARK 500 PRO C 158 47.51 -93.64 REMARK 500 ASN D 62 32.65 -94.42 REMARK 500 LYS D 77 62.09 61.64 REMARK 500 GLN E 43 155.24 67.82 REMARK 500 ALA E 52 -9.16 71.98 REMARK 500 SER E 61 1.18 -68.97 REMARK 500 PHE E 92 56.12 -97.90 REMARK 500 TYR E 93 -50.36 -122.13 REMARK 500 PHE E 102 14.39 -140.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 POV A 601 REMARK 610 LBN B 604 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 101 NE2 REMARK 620 2 HEM B 602 NA 94.6 REMARK 620 3 HEM B 602 NB 102.6 90.1 REMARK 620 4 HEM B 602 NC 88.6 176.8 89.6 REMARK 620 5 HEM B 602 ND 86.3 89.7 171.1 90.1 REMARK 620 6 HIS B 209 NE2 149.2 102.4 102.9 74.6 68.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 115 NE2 REMARK 620 2 HEM B 601 NA 99.6 REMARK 620 3 HEM B 601 NB 91.6 89.7 REMARK 620 4 HEM B 601 NC 84.6 175.9 90.6 REMARK 620 5 HEM B 601 ND 94.4 89.5 174.0 89.7 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-37159 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF NADPH OXIDASE 2 IN COMPLEX WITH P22PHOX AND REMARK 900 EROS DBREF 8KEI A 3 135 UNP P13498 CY24A_HUMAN 3 135 DBREF 8KEI B 6 570 UNP P04839 CY24B_HUMAN 6 570 DBREF 8KEI C 2 225 PDB 8KEI 8KEI 2 225 DBREF 8KEI D 1 164 UNP Q9BQA9 CYBC1_HUMAN 1 164 DBREF 8KEI E 2 218 PDB 8KEI 8KEI 2 218 SEQRES 1 A 133 GLN ILE GLU TRP ALA MET TRP ALA ASN GLU GLN ALA LEU SEQRES 2 A 133 ALA SER GLY LEU ILE LEU ILE THR GLY GLY ILE VAL ALA SEQRES 3 A 133 THR ALA GLY ARG PHE THR GLN TRP TYR PHE GLY ALA TYR SEQRES 4 A 133 SER ILE VAL ALA GLY VAL PHE VAL CYS LEU LEU GLU TYR SEQRES 5 A 133 PRO ARG GLY LYS ARG LYS LYS GLY SER THR MET GLU ARG SEQRES 6 A 133 TRP GLY GLN LYS TYR MET THR ALA VAL VAL LYS LEU PHE SEQRES 7 A 133 GLY PRO PHE THR ARG ASN TYR TYR VAL ARG ALA VAL LEU SEQRES 8 A 133 HIS LEU LEU LEU SER VAL PRO ALA GLY PHE LEU LEU ALA SEQRES 9 A 133 THR ILE LEU GLY THR ALA CYS LEU ALA ILE ALA SER GLY SEQRES 10 A 133 ILE TYR LEU LEU ALA ALA VAL ARG GLY GLU GLN TRP THR SEQRES 11 A 133 PRO ILE GLU SEQRES 1 B 565 VAL ASN GLU GLY LEU SER ILE PHE VAL ILE LEU VAL TRP SEQRES 2 B 565 LEU GLY LEU ASN VAL PHE LEU PHE VAL TRP TYR TYR ARG SEQRES 3 B 565 VAL TYR ASP ILE PRO PRO LYS PHE PHE TYR THR ARG LYS SEQRES 4 B 565 LEU LEU GLY SER ALA LEU ALA LEU ALA ARG ALA PRO ALA SEQRES 5 B 565 ALA CYS LEU ASN PHE ASN CYS MET LEU ILE LEU LEU PRO SEQRES 6 B 565 VAL CYS ARG ASN LEU LEU SER PHE LEU ARG GLY SER SER SEQRES 7 B 565 ALA CYS CYS SER THR ARG VAL ARG ARG GLN LEU ASP ARG SEQRES 8 B 565 ASN LEU THR PHE HIS LYS MET VAL ALA TRP MET ILE ALA SEQRES 9 B 565 LEU HIS SER ALA ILE HIS THR ILE ALA HIS LEU PHE ASN SEQRES 10 B 565 VAL GLU TRP CYS VAL ASN ALA ARG VAL ASN ASN SER ASP SEQRES 11 B 565 PRO TYR SER VAL ALA LEU SER GLU LEU GLY ASP ARG GLN SEQRES 12 B 565 ASN GLU SER TYR LEU ASN PHE ALA ARG LYS ARG ILE LYS SEQRES 13 B 565 ASN PRO GLU GLY GLY LEU TYR LEU ALA VAL THR LEU LEU SEQRES 14 B 565 ALA GLY ILE THR GLY VAL VAL ILE THR LEU CYS LEU ILE SEQRES 15 B 565 LEU ILE ILE THR SER SER THR LYS THR ILE ARG ARG SER SEQRES 16 B 565 TYR PHE GLU VAL PHE TRP TYR THR HIS HIS LEU PHE VAL SEQRES 17 B 565 ILE PHE PHE ILE GLY LEU ALA ILE HIS GLY ALA GLU ARG SEQRES 18 B 565 ILE VAL ARG GLY GLN THR ALA GLU SER LEU ALA VAL HIS SEQRES 19 B 565 ASN ILE THR VAL CYS GLU GLN LYS ILE SER GLU TRP GLY SEQRES 20 B 565 LYS ILE LYS GLU CYS PRO ILE PRO GLN PHE ALA GLY ASN SEQRES 21 B 565 PRO PRO MET THR TRP LYS TRP ILE VAL GLY PRO MET PHE SEQRES 22 B 565 LEU TYR LEU CYS GLU ARG LEU VAL ARG PHE TRP ARG SER SEQRES 23 B 565 GLN GLN LYS VAL VAL ILE THR LYS VAL VAL THR HIS PRO SEQRES 24 B 565 PHE LYS THR ILE GLU LEU GLN MET LYS LYS LYS GLY PHE SEQRES 25 B 565 LYS MET GLU VAL GLY GLN TYR ILE PHE VAL LYS CYS PRO SEQRES 26 B 565 LYS VAL SER LYS LEU GLU TRP HIS PRO PHE THR LEU THR SEQRES 27 B 565 SER ALA PRO GLU GLU ASP PHE PHE SER ILE HIS ILE ARG SEQRES 28 B 565 ILE VAL GLY ASP TRP THR GLU GLY LEU PHE ASN ALA CYS SEQRES 29 B 565 GLY CYS ASP LYS GLN GLU PHE GLN ASP ALA TRP LYS LEU SEQRES 30 B 565 PRO LYS ILE ALA VAL ASP GLY PRO PHE GLY THR ALA SER SEQRES 31 B 565 GLU ASP VAL PHE SER TYR GLU VAL VAL MET LEU VAL GLY SEQRES 32 B 565 ALA GLY ILE GLY VAL THR PRO PHE ALA SER ILE LEU LYS SEQRES 33 B 565 SER VAL TRP TYR LYS TYR CYS ASN ASN ALA THR ASN LEU SEQRES 34 B 565 LYS LEU LYS LYS ILE TYR PHE TYR TRP LEU CYS ARG ASP SEQRES 35 B 565 THR HIS ALA PHE GLU TRP PHE ALA ASP LEU LEU GLN LEU SEQRES 36 B 565 LEU GLU SER GLN MET GLN GLU ARG ASN ASN ALA GLY PHE SEQRES 37 B 565 LEU SER TYR ASN ILE TYR LEU THR GLY TRP ASP GLU SER SEQRES 38 B 565 GLN ALA ASN HIS PHE ALA VAL HIS HIS ASP GLU GLU LYS SEQRES 39 B 565 ASP VAL ILE THR GLY LEU LYS GLN LYS THR LEU TYR GLY SEQRES 40 B 565 ARG PRO ASN TRP ASP ASN GLU PHE LYS THR ILE ALA SER SEQRES 41 B 565 GLN HIS PRO ASN THR ARG ILE GLY VAL PHE LEU CYS GLY SEQRES 42 B 565 PRO GLU ALA LEU ALA GLU THR LEU SER LYS GLN SER ILE SEQRES 43 B 565 SER ASN SER GLU SER GLY PRO ARG GLY VAL HIS PHE ILE SEQRES 44 B 565 PHE ASN LYS GLU ASN PHE SEQRES 1 C 224 GLN SER LEU GLU GLU SER GLY GLY ASP LEU VAL LYS PRO SEQRES 2 C 224 GLY ALA SER LEU THR LEU THR CYS THR ALA SER GLY ILE SEQRES 3 C 224 ASP PHE SER GLY TYR HIS TYR MET CYS TRP VAL ARG GLN SEQRES 4 C 224 ALA PRO GLY LYS GLY LEU GLU TRP ILE GLY CYS THR HIS SEQRES 5 C 224 SER GLY ASP GLY THR THR TYR TYR ALA ARG TRP ALA LYS SEQRES 6 C 224 GLY ARG PHE THR ILE SER LYS THR SER SER THR THR VAL SEQRES 7 C 224 THR LEU GLN MET THR SER LEU THR ALA ALA ASP THR ALA SEQRES 8 C 224 THR TYR PHE CYS ALA ARG ARG TYR VAL PHE SER GLY GLY SEQRES 9 C 224 TYR SER GLY LEU ASP SER TRP GLY PRO GLY THR LEU VAL SEQRES 10 C 224 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 C 224 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 C 224 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 C 224 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 C 224 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 C 224 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 C 224 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 C 224 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 C 224 LYS SER CYS SEQRES 1 D 164 MET TYR LEU GLN VAL GLU THR ARG THR SER SER ARG LEU SEQRES 2 D 164 HIS LEU LYS ARG ALA PRO GLY ILE ARG SER TRP SER LEU SEQRES 3 D 164 LEU VAL GLY ILE LEU SER ILE GLY LEU ALA ALA ALA TYR SEQRES 4 D 164 TYR SER GLY ASP SER LEU GLY TRP LYS LEU PHE TYR VAL SEQRES 5 D 164 THR GLY CYS LEU PHE VAL ALA VAL GLN ASN LEU GLU ASP SEQRES 6 D 164 TRP GLU GLU ALA ILE PHE ASP LYS SER THR GLY LYS VAL SEQRES 7 D 164 VAL LEU LYS THR PHE SER LEU TYR LYS LYS LEU LEU THR SEQRES 8 D 164 LEU PHE ARG ALA GLY HIS ASP GLN VAL VAL VAL LEU LEU SEQRES 9 D 164 HIS ASP VAL ARG ASP VAL SER VAL GLU GLU GLU LYS VAL SEQRES 10 D 164 ARG TYR PHE GLY LYS GLY TYR MET VAL VAL LEU ARG LEU SEQRES 11 D 164 ALA THR GLY PHE SER HIS PRO LEU THR GLN SER ALA VAL SEQRES 12 D 164 MET GLY HIS ARG SER ASP VAL GLU ALA ILE ALA LYS LEU SEQRES 13 D 164 ILE THR SER PHE LEU GLU LEU HIS SEQRES 1 E 217 ALA LEU VAL MET THR GLN THR PRO SER SER VAL SER ALA SEQRES 2 E 217 ALA VAL ARG GLY THR VAL THR ILE LYS CYS GLN ALA SER SEQRES 3 E 217 GLU ASN ILE TYR SER ASN LEU ALA TRP TYR GLN GLN LYS SEQRES 4 E 217 PRO GLY GLN PRO PRO LYS LEU LEU ILE TYR GLY ALA SER SEQRES 5 E 217 LYS LEU ALA SER GLY VAL PRO SER ARG PHE LYS GLY SER SEQRES 6 E 217 GLY SER GLY THR ASP TYR THR LEU THR ILE ARG ASP LEU SEQRES 7 E 217 GLU ALA ALA ASP ALA ALA THR TYR TYR CYS GLN GLN PHE SEQRES 8 E 217 TYR ASP SER LEU ASN THR ASP ASN ALA PHE GLY GLY GLY SEQRES 9 E 217 THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER SEQRES 10 E 217 VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER SEQRES 11 E 217 GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR SEQRES 12 E 217 PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA SEQRES 13 E 217 LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN SEQRES 14 E 217 ASP SER LYS ASP SER THR TYR SER LEU SER SER THR LEU SEQRES 15 E 217 THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR SEQRES 16 E 217 ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL SEQRES 17 E 217 THR LYS SER PHE ASN ARG GLY GLU CYS HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET POV A 601 26 HET HEM B 601 43 HET HEM B 602 43 HET NAG B 603 14 HET LBN B 604 48 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM POV (2S)-3-(HEXADECANOYLOXY)-2-[(9Z)-OCTADEC-9- HETNAM 2 POV ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL PHOSPHATE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM LBN 1-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN POV POPC HETSYN HEM HEME HETSYN LBN (2R)-2-[(9Z)-9-OCTADECENOYLOXY]-3-(PALMITOYLOXY)PROPYL HETSYN 2 LBN 2-(TRIMETHYLAMMONIO)ETHYL PHOSPHATE FORMUL 6 NAG 5(C8 H15 N O6) FORMUL 6 BMA 2(C6 H12 O6) FORMUL 8 POV C42 H82 N O8 P FORMUL 9 HEM 2(C34 H32 FE N4 O4) FORMUL 12 LBN C42 H82 N O8 P HELIX 1 AA1 TRP A 6 GLY A 31 1 26 HELIX 2 AA2 TRP A 36 GLU A 53 1 18 HELIX 3 AA3 GLN A 70 LYS A 78 1 9 HELIX 4 AA4 ASN A 86 SER A 98 1 13 HELIX 5 AA5 VAL A 99 PHE A 103 5 5 HELIX 6 AA6 LEU A 109 GLY A 128 1 20 HELIX 7 AA7 SER B 11 ILE B 35 1 25 HELIX 8 AA8 PRO B 36 PHE B 39 5 4 HELIX 9 AA9 PHE B 40 GLY B 47 1 8 HELIX 10 AB1 SER B 48 GLY B 81 1 34 HELIX 11 AB2 ARG B 96 VAL B 131 1 36 HELIX 12 AB3 ASP B 135 GLU B 143 1 9 HELIX 13 AB4 GLU B 164 LEU B 173 1 10 HELIX 14 AB5 GLY B 176 SER B 193 1 18 HELIX 15 AB6 TYR B 207 HIS B 210 5 4 HELIX 16 AB7 LEU B 211 GLY B 223 1 13 HELIX 17 AB8 THR B 232 ASN B 240 1 9 HELIX 18 AB9 LYS B 247 TRP B 251 5 5 HELIX 19 AC1 ILE B 273 SER B 291 1 19 HELIX 20 AC2 TRP B 361 PHE B 366 5 6 HELIX 21 AC3 VAL B 413 ASN B 430 1 18 HELIX 22 AC4 PHE B 451 SER B 463 1 13 HELIX 23 AC5 GLN B 464 ASN B 469 5 6 HELIX 24 AC6 ASN B 518 SER B 525 1 8 HELIX 25 AC7 ALA B 543 SER B 554 1 12 HELIX 26 AC8 ALA C 62 LYS C 66 5 5 HELIX 27 AC9 SER C 196 THR C 200 5 5 HELIX 28 AD1 GLY D 20 TYR D 40 1 21 HELIX 29 AD2 GLY D 46 ASN D 62 1 17 HELIX 30 AD3 SER D 84 THR D 91 1 8 HELIX 31 AD4 LEU D 92 ARG D 94 5 3 HELIX 32 AD5 HIS D 146 GLU D 162 1 17 HELIX 33 AD6 SER E 125 SER E 131 1 7 HELIX 34 AD7 SER E 186 GLU E 191 1 6 SHEET 1 AA1 2 ARG B 229 GLN B 231 0 SHEET 2 AA1 2 PHE B 262 GLY B 264 -1 O ALA B 263 N GLY B 230 SHEET 1 AA2 3 VAL B 296 VAL B 301 0 SHEET 2 AA2 3 GLU B 309 LYS B 313 -1 O GLN B 311 N LYS B 299 SHEET 3 AA2 3 ILE B 353 HIS B 354 -1 O ILE B 353 N LEU B 310 SHEET 1 AA3 6 ALA B 386 VAL B 387 0 SHEET 2 AA3 6 TYR B 324 LYS B 328 -1 N LYS B 328 O ALA B 386 SHEET 3 AA3 6 GLU B 336 THR B 341 -1 O HIS B 338 N VAL B 327 SHEET 4 AA3 6 GLN D 99 VAL D 102 1 O VAL D 101 N TRP B 337 SHEET 5 AA3 6 VAL D 78 PHE D 83 -1 N VAL D 78 O VAL D 102 SHEET 6 AA3 6 TRP D 66 ILE D 70 -1 N TRP D 66 O PHE D 83 SHEET 1 AA4 3 VAL B 404 VAL B 407 0 SHEET 2 AA4 3 ILE B 532 LEU B 536 1 O GLY B 533 N MET B 405 SHEET 3 AA4 3 PHE B 563 PHE B 565 1 O ILE B 564 N ILE B 532 SHEET 1 AA5 2 TRP B 443 CYS B 445 0 SHEET 2 AA5 2 ILE B 478 LEU B 480 1 O TYR B 479 N TRP B 443 SHEET 1 AA6 4 SER C 3 SER C 7 0 SHEET 2 AA6 4 LEU C 18 SER C 25 -1 O THR C 23 N GLU C 5 SHEET 3 AA6 4 THR C 78 MET C 83 -1 O VAL C 79 N CYS C 22 SHEET 4 AA6 4 PHE C 69 THR C 74 -1 N THR C 74 O THR C 78 SHEET 1 AA7 4 LEU C 46 HIS C 53 0 SHEET 2 AA7 4 TYR C 34 GLN C 40 -1 N ARG C 39 O GLU C 47 SHEET 3 AA7 4 THR C 93 VAL C 101 -1 O PHE C 95 N VAL C 38 SHEET 4 AA7 4 SER C 107 ASP C 110 -1 O GLY C 108 N TYR C 100 SHEET 1 AA8 3 THR C 144 VAL C 151 0 SHEET 2 AA8 3 TYR C 185 PRO C 194 -1 O VAL C 193 N ALA C 145 SHEET 3 AA8 3 VAL C 172 THR C 174 -1 N HIS C 173 O VAL C 190 SHEET 1 AA9 3 THR C 144 VAL C 151 0 SHEET 2 AA9 3 TYR C 185 PRO C 194 -1 O VAL C 193 N ALA C 145 SHEET 3 AA9 3 VAL C 178 LEU C 179 -1 N VAL C 178 O SER C 186 SHEET 1 AB1 3 THR C 160 TRP C 163 0 SHEET 2 AB1 3 ILE C 204 ASN C 208 -1 O ASN C 206 N SER C 162 SHEET 3 AB1 3 ASP C 217 LYS C 219 -1 O LYS C 218 N CYS C 205 SHEET 1 AB2 2 GLN D 4 VAL D 5 0 SHEET 2 AB2 2 LEU D 15 LYS D 16 -1 O LYS D 16 N GLN D 4 SHEET 1 AB3 3 VAL D 107 LYS D 116 0 SHEET 2 AB3 3 LYS D 122 LEU D 130 -1 O GLY D 123 N GLU D 115 SHEET 3 AB3 3 SER D 135 PRO D 137 -1 O HIS D 136 N LEU D 128 SHEET 1 AB4 3 VAL D 107 LYS D 116 0 SHEET 2 AB4 3 LYS D 122 LEU D 130 -1 O GLY D 123 N GLU D 115 SHEET 3 AB4 3 VAL D 143 MET D 144 -1 O VAL D 143 N TYR D 124 SHEET 1 AB5 4 MET E 5 GLN E 7 0 SHEET 2 AB5 4 VAL E 20 ALA E 26 -1 O GLN E 25 N THR E 6 SHEET 3 AB5 4 ASP E 71 ILE E 76 -1 O ILE E 76 N VAL E 20 SHEET 4 AB5 4 LYS E 64 SER E 68 -1 N LYS E 64 O THR E 75 SHEET 1 AB6 2 SER E 13 ALA E 15 0 SHEET 2 AB6 2 GLU E 109 LYS E 111 1 O LYS E 111 N ALA E 14 SHEET 1 AB7 3 LYS E 46 TYR E 50 0 SHEET 2 AB7 3 LEU E 34 GLN E 39 -1 N GLN E 38 O LYS E 46 SHEET 3 AB7 3 THR E 86 GLN E 91 -1 O THR E 86 N GLN E 39 SHEET 1 AB8 4 SER E 118 PHE E 122 0 SHEET 2 AB8 4 ALA E 134 PHE E 143 -1 O ASN E 141 N SER E 118 SHEET 3 AB8 4 TYR E 177 LEU E 185 -1 O LEU E 185 N ALA E 134 SHEET 4 AB8 4 GLN E 164 VAL E 167 -1 N GLN E 164 O THR E 182 SHEET 1 AB9 4 ALA E 157 LEU E 158 0 SHEET 2 AB9 4 ALA E 148 VAL E 154 -1 N VAL E 154 O ALA E 157 SHEET 3 AB9 4 VAL E 195 HIS E 202 -1 O GLU E 199 N GLN E 151 SHEET 4 AB9 4 PHE E 213 ASN E 214 -1 O PHE E 213 N TYR E 196 SSBOND 1 CYS B 244 CYS B 257 1555 1555 2.03 SSBOND 2 CYS C 22 CYS C 96 1555 1555 2.04 SSBOND 3 CYS C 36 CYS C 51 1555 1555 2.01 SSBOND 4 CYS C 149 CYS C 205 1555 1555 2.03 SSBOND 5 CYS E 24 CYS E 89 1555 1555 2.04 SSBOND 6 CYS E 138 CYS E 198 1555 1555 2.03 LINK ND2 ASN B 132 C1 NAG B 603 1555 1555 1.45 LINK ND2 ASN B 149 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 240 C1 NAG F 1 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.45 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.46 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.47 LINK NE2 HIS B 101 FE HEM B 602 1555 1555 2.12 LINK NE2 HIS B 115 FE HEM B 601 1555 1555 2.22 LINK NE2 HIS B 209 FE HEM B 602 1555 1555 2.78 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000