HEADER DNA BINDING PROTEIN 12-AUG-23 8KEL TITLE STRUCTURE OF DEXA REVEAL THE NOVEL MECHANISM OF DNA CATALYSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXODEOXYRIBONUCLEASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI 0.1197; SOURCE 3 ORGANISM_TAXID: 1005443; SOURCE 4 GENE: DEXA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS CHLORINASE, SAM, CLDA, FDA, ANTIBIOTIC, OXIDOREDUCTASE, DNA BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.LIU,B.MA,Y.KANG,B.LIU,Y.LI REVDAT 1 19-FEB-25 8KEL 0 JRNL AUTH Y.H.LIU JRNL TITL STRUCTURE OF EXOD AT 2.4 ANGSTROMS RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 30056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9400 - 6.2000 0.97 2976 164 0.1964 0.2240 REMARK 3 2 6.2000 - 4.9200 0.99 2956 142 0.2498 0.2951 REMARK 3 3 4.9200 - 4.3000 0.97 2931 136 0.1967 0.2499 REMARK 3 4 4.3000 - 3.9100 0.99 2921 155 0.2093 0.2685 REMARK 3 5 3.9100 - 3.6300 0.73 2166 99 0.2327 0.2888 REMARK 3 6 3.6300 - 3.4200 0.98 2929 115 0.2287 0.2675 REMARK 3 7 3.4200 - 3.2400 1.00 2959 140 0.2346 0.3105 REMARK 3 8 3.2400 - 3.1000 1.00 2929 175 0.2510 0.3832 REMARK 3 9 3.1000 - 2.9800 1.00 2942 155 0.2660 0.3533 REMARK 3 10 2.9800 - 2.8800 0.99 2913 153 0.2936 0.3737 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.434 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.255 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6694 REMARK 3 ANGLE : 1.082 9089 REMARK 3 CHIRALITY : 0.058 1017 REMARK 3 PLANARITY : 0.010 1186 REMARK 3 DIHEDRAL : 7.216 891 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 20.1862 -1.2055 27.4365 REMARK 3 T TENSOR REMARK 3 T11: 0.4365 T22: 0.4246 REMARK 3 T33: 0.5838 T12: 0.0067 REMARK 3 T13: -0.0334 T23: 0.0813 REMARK 3 L TENSOR REMARK 3 L11: 1.0399 L22: 0.7311 REMARK 3 L33: 2.7303 L12: -0.4078 REMARK 3 L13: -1.4248 L23: 0.8050 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: 0.1441 S13: 0.1425 REMARK 3 S21: -0.1499 S22: 0.0391 S23: -0.0766 REMARK 3 S31: -0.0096 S32: -0.1325 S33: -0.0498 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8KEL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300040012. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30240 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.880 REMARK 200 RESOLUTION RANGE LOW (A) : 35.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.02M CALCIUM CHLORIDE DIHYDRATE, 0.1M REMARK 280 SODIUM ACETATE TRIHYDRATE PH 4.6, 30% V/V (+/-)-2-METHYL-2,4- REMARK 280 PENTANEDIOL, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.14250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 222 REMARK 465 LEU A 223 REMARK 465 PRO A 224 REMARK 465 THR A 225 REMARK 465 LYS A 226 REMARK 465 ARG A 227 REMARK 465 THR B 225 REMARK 465 LYS B 226 REMARK 465 ARG B 227 REMARK 465 GLU C 32 REMARK 465 VAL C 33 REMARK 465 VAL C 34 REMARK 465 GLU C 35 REMARK 465 PRO C 174 REMARK 465 LEU C 175 REMARK 465 PRO C 176 REMARK 465 LYS C 177 REMARK 465 GLY C 178 REMARK 465 MET C 207 REMARK 465 GLY C 208 REMARK 465 LEU C 209 REMARK 465 GLU C 210 REMARK 465 ASP C 211 REMARK 465 ALA C 212 REMARK 465 PRO C 213 REMARK 465 SER C 214 REMARK 465 GLU C 215 REMARK 465 GLU C 216 REMARK 465 GLU C 217 REMARK 465 CYS C 218 REMARK 465 ASP C 219 REMARK 465 PRO C 220 REMARK 465 LEU C 221 REMARK 465 SER C 222 REMARK 465 LEU C 223 REMARK 465 PRO C 224 REMARK 465 THR C 225 REMARK 465 LYS C 226 REMARK 465 ARG C 227 REMARK 465 VAL D 33 REMARK 465 VAL D 34 REMARK 465 GLU D 35 REMARK 465 LYS D 177 REMARK 465 GLY D 178 REMARK 465 THR D 179 REMARK 465 LEU D 180 REMARK 465 ASP D 181 REMARK 465 GLY D 182 REMARK 465 PHE D 183 REMARK 465 GLU D 216 REMARK 465 GLU D 217 REMARK 465 CYS D 218 REMARK 465 THR D 225 REMARK 465 LYS D 226 REMARK 465 ARG D 227 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 20 CG1 CG2 CD1 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 HIS A 186 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 211 CG OD1 OD2 REMARK 470 SER A 214 OG REMARK 470 ASP A 219 CG OD1 OD2 REMARK 470 LEU A 221 CG CD1 CD2 REMARK 470 VAL B 34 CG1 CG2 REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 ASP B 38 CG OD1 OD2 REMARK 470 LYS B 46 CG CD CE NZ REMARK 470 GLU B 66 CG CD OE1 OE2 REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 ARG B 76 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 77 CG CD CE NZ REMARK 470 ASN B 78 CG OD1 ND2 REMARK 470 ILE B 79 CG1 CG2 CD1 REMARK 470 ASN B 103 CG OD1 ND2 REMARK 470 ASP B 169 CG OD1 OD2 REMARK 470 LYS B 177 CG CD CE NZ REMARK 470 LEU B 180 CG CD1 CD2 REMARK 470 ASP B 181 CG OD1 OD2 REMARK 470 VAL B 184 CG1 CG2 REMARK 470 LYS B 194 CG CD CE NZ REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 ARG B 204 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 ASP B 211 CG OD1 OD2 REMARK 470 GLU B 215 CG CD OE1 OE2 REMARK 470 GLU B 216 CG CD OE1 OE2 REMARK 470 GLU B 217 CG CD OE1 OE2 REMARK 470 ASP B 219 CG OD1 OD2 REMARK 470 LEU B 221 CG CD1 CD2 REMARK 470 LEU B 223 CG CD1 CD2 REMARK 470 PRO B 224 CG CD REMARK 470 ILE C 20 CG1 CG2 CD1 REMARK 470 LYS C 46 CG CD CE NZ REMARK 470 LYS C 48 CG CD CE NZ REMARK 470 LYS C 52 CG CD CE NZ REMARK 470 GLU C 74 CG CD OE1 OE2 REMARK 470 LYS C 77 CG CD CE NZ REMARK 470 GLU C 84 CG CD OE1 OE2 REMARK 470 LYS C 108 CG CD CE NZ REMARK 470 HIS C 186 CG ND1 CD2 CE1 NE2 REMARK 470 TYR C 201 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG C 204 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 205 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP D 38 CG OD1 OD2 REMARK 470 LYS D 46 CG CD CE NZ REMARK 470 GLU D 66 CG CD OE1 OE2 REMARK 470 GLU D 74 CG CD OE1 OE2 REMARK 470 ARG D 76 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 77 CG CD CE NZ REMARK 470 ASN D 78 CG OD1 ND2 REMARK 470 ILE D 79 CG1 CG2 CD1 REMARK 470 ASN D 103 CG OD1 ND2 REMARK 470 LEU D 164 CG CD1 CD2 REMARK 470 ASP D 169 CG OD1 OD2 REMARK 470 LEU D 175 CG CD1 CD2 REMARK 470 VAL D 184 CG1 CG2 REMARK 470 LYS D 194 CG CD CE NZ REMARK 470 MET D 199 CG SD CE REMARK 470 LYS D 200 CG CD CE NZ REMARK 470 TYR D 201 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU D 203 CG CD1 CD2 REMARK 470 ARG D 204 CG CD NE CZ NH1 NH2 REMARK 470 TYR D 205 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET D 207 CG SD CE REMARK 470 LEU D 209 CG CD1 CD2 REMARK 470 GLU D 210 CG CD OE1 OE2 REMARK 470 ASP D 211 CG OD1 OD2 REMARK 470 GLU D 215 CG CD OE1 OE2 REMARK 470 ASP D 219 CG OD1 OD2 REMARK 470 LEU D 221 CG CD1 CD2 REMARK 470 LEU D 223 CG CD1 CD2 REMARK 470 PRO D 224 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN C 154 OG SER D 117 2.08 REMARK 500 NE2 GLN A 131 O ASP A 142 2.15 REMARK 500 O GLN A 71 NH2 ARG A 76 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 27 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 PHE A 27 CB - CG - CD1 ANGL. DEV. = 5.1 DEGREES REMARK 500 PRO D 224 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 186 46.01 -90.32 REMARK 500 ASN B 70 30.08 -93.06 REMARK 500 CYS B 113 142.15 -179.01 REMARK 500 HIS B 186 40.02 -101.47 REMARK 500 HIS C 57 -36.24 -130.06 REMARK 500 PHE C 118 -62.55 -100.71 REMARK 500 ASP C 169 40.96 35.57 REMARK 500 HIS C 186 40.36 -105.00 REMARK 500 ASN D 70 36.37 -99.74 REMARK 500 TRP D 107 -62.48 -93.38 REMARK 500 CYS D 113 141.29 -175.89 REMARK 500 ASP D 169 -6.13 70.85 REMARK 500 PRO D 220 17.16 -57.40 REMARK 500 REMARK 500 REMARK: NULL DBREF 8KEL A 1 227 UNP P04536 EXOD_BPT4 1 227 DBREF 8KEL B 1 227 UNP P04536 EXOD_BPT4 1 227 DBREF 8KEL C 1 227 UNP P04536 EXOD_BPT4 1 227 DBREF 8KEL D 1 227 UNP P04536 EXOD_BPT4 1 227 SEQRES 1 A 227 MET PHE ASP PHE ILE ILE ASP PHE GLU THR MET GLY SER SEQRES 2 A 227 GLY GLU LYS ALA ALA VAL ILE ASP LEU ALA VAL ILE ALA SEQRES 3 A 227 PHE ASP PRO ASN PRO GLU VAL VAL GLU THR PHE ASP GLU SEQRES 4 A 227 LEU VAL SER ARG GLY ILE LYS ILE LYS PHE ASP LEU LYS SEQRES 5 A 227 SER GLN LYS GLY HIS ARG LEU PHE THR LYS SER THR ILE SEQRES 6 A 227 GLU TRP TRP LYS ASN GLN SER PRO GLU ALA ARG LYS ASN SEQRES 7 A 227 ILE ALA PRO SER ASP GLU ASP VAL SER THR ILE ASP GLY SEQRES 8 A 227 ILE ALA LYS PHE ASN ASP TYR ILE ASN ALA HIS ASN ILE SEQRES 9 A 227 ASP PRO TRP LYS SER GLN GLY TRP CYS ARG GLY MET SER SEQRES 10 A 227 PHE ASP PHE PRO ILE LEU VAL ASP LEU ILE ARG ASP ILE SEQRES 11 A 227 GLN ARG LEU ASN GLY VAL SER GLU ASN GLU LEU ASP THR SEQRES 12 A 227 PHE LYS LEU GLU PRO CYS LYS PHE TRP ASN GLN ARG ASP SEQRES 13 A 227 ILE ARG THR ARG ILE GLU ALA LEU LEU LEU VAL ARG ASP SEQRES 14 A 227 MET THR THR CYS PRO LEU PRO LYS GLY THR LEU ASP GLY SEQRES 15 A 227 PHE VAL ALA HIS ASP SER ILE HIS ASP CYS ALA LYS ASP SEQRES 16 A 227 ILE LEU MET MET LYS TYR ALA LEU ARG TYR ALA MET GLY SEQRES 17 A 227 LEU GLU ASP ALA PRO SER GLU GLU GLU CYS ASP PRO LEU SEQRES 18 A 227 SER LEU PRO THR LYS ARG SEQRES 1 B 227 MET PHE ASP PHE ILE ILE ASP PHE GLU THR MET GLY SER SEQRES 2 B 227 GLY GLU LYS ALA ALA VAL ILE ASP LEU ALA VAL ILE ALA SEQRES 3 B 227 PHE ASP PRO ASN PRO GLU VAL VAL GLU THR PHE ASP GLU SEQRES 4 B 227 LEU VAL SER ARG GLY ILE LYS ILE LYS PHE ASP LEU LYS SEQRES 5 B 227 SER GLN LYS GLY HIS ARG LEU PHE THR LYS SER THR ILE SEQRES 6 B 227 GLU TRP TRP LYS ASN GLN SER PRO GLU ALA ARG LYS ASN SEQRES 7 B 227 ILE ALA PRO SER ASP GLU ASP VAL SER THR ILE ASP GLY SEQRES 8 B 227 ILE ALA LYS PHE ASN ASP TYR ILE ASN ALA HIS ASN ILE SEQRES 9 B 227 ASP PRO TRP LYS SER GLN GLY TRP CYS ARG GLY MET SER SEQRES 10 B 227 PHE ASP PHE PRO ILE LEU VAL ASP LEU ILE ARG ASP ILE SEQRES 11 B 227 GLN ARG LEU ASN GLY VAL SER GLU ASN GLU LEU ASP THR SEQRES 12 B 227 PHE LYS LEU GLU PRO CYS LYS PHE TRP ASN GLN ARG ASP SEQRES 13 B 227 ILE ARG THR ARG ILE GLU ALA LEU LEU LEU VAL ARG ASP SEQRES 14 B 227 MET THR THR CYS PRO LEU PRO LYS GLY THR LEU ASP GLY SEQRES 15 B 227 PHE VAL ALA HIS ASP SER ILE HIS ASP CYS ALA LYS ASP SEQRES 16 B 227 ILE LEU MET MET LYS TYR ALA LEU ARG TYR ALA MET GLY SEQRES 17 B 227 LEU GLU ASP ALA PRO SER GLU GLU GLU CYS ASP PRO LEU SEQRES 18 B 227 SER LEU PRO THR LYS ARG SEQRES 1 C 227 MET PHE ASP PHE ILE ILE ASP PHE GLU THR MET GLY SER SEQRES 2 C 227 GLY GLU LYS ALA ALA VAL ILE ASP LEU ALA VAL ILE ALA SEQRES 3 C 227 PHE ASP PRO ASN PRO GLU VAL VAL GLU THR PHE ASP GLU SEQRES 4 C 227 LEU VAL SER ARG GLY ILE LYS ILE LYS PHE ASP LEU LYS SEQRES 5 C 227 SER GLN LYS GLY HIS ARG LEU PHE THR LYS SER THR ILE SEQRES 6 C 227 GLU TRP TRP LYS ASN GLN SER PRO GLU ALA ARG LYS ASN SEQRES 7 C 227 ILE ALA PRO SER ASP GLU ASP VAL SER THR ILE ASP GLY SEQRES 8 C 227 ILE ALA LYS PHE ASN ASP TYR ILE ASN ALA HIS ASN ILE SEQRES 9 C 227 ASP PRO TRP LYS SER GLN GLY TRP CYS ARG GLY MET SER SEQRES 10 C 227 PHE ASP PHE PRO ILE LEU VAL ASP LEU ILE ARG ASP ILE SEQRES 11 C 227 GLN ARG LEU ASN GLY VAL SER GLU ASN GLU LEU ASP THR SEQRES 12 C 227 PHE LYS LEU GLU PRO CYS LYS PHE TRP ASN GLN ARG ASP SEQRES 13 C 227 ILE ARG THR ARG ILE GLU ALA LEU LEU LEU VAL ARG ASP SEQRES 14 C 227 MET THR THR CYS PRO LEU PRO LYS GLY THR LEU ASP GLY SEQRES 15 C 227 PHE VAL ALA HIS ASP SER ILE HIS ASP CYS ALA LYS ASP SEQRES 16 C 227 ILE LEU MET MET LYS TYR ALA LEU ARG TYR ALA MET GLY SEQRES 17 C 227 LEU GLU ASP ALA PRO SER GLU GLU GLU CYS ASP PRO LEU SEQRES 18 C 227 SER LEU PRO THR LYS ARG SEQRES 1 D 227 MET PHE ASP PHE ILE ILE ASP PHE GLU THR MET GLY SER SEQRES 2 D 227 GLY GLU LYS ALA ALA VAL ILE ASP LEU ALA VAL ILE ALA SEQRES 3 D 227 PHE ASP PRO ASN PRO GLU VAL VAL GLU THR PHE ASP GLU SEQRES 4 D 227 LEU VAL SER ARG GLY ILE LYS ILE LYS PHE ASP LEU LYS SEQRES 5 D 227 SER GLN LYS GLY HIS ARG LEU PHE THR LYS SER THR ILE SEQRES 6 D 227 GLU TRP TRP LYS ASN GLN SER PRO GLU ALA ARG LYS ASN SEQRES 7 D 227 ILE ALA PRO SER ASP GLU ASP VAL SER THR ILE ASP GLY SEQRES 8 D 227 ILE ALA LYS PHE ASN ASP TYR ILE ASN ALA HIS ASN ILE SEQRES 9 D 227 ASP PRO TRP LYS SER GLN GLY TRP CYS ARG GLY MET SER SEQRES 10 D 227 PHE ASP PHE PRO ILE LEU VAL ASP LEU ILE ARG ASP ILE SEQRES 11 D 227 GLN ARG LEU ASN GLY VAL SER GLU ASN GLU LEU ASP THR SEQRES 12 D 227 PHE LYS LEU GLU PRO CYS LYS PHE TRP ASN GLN ARG ASP SEQRES 13 D 227 ILE ARG THR ARG ILE GLU ALA LEU LEU LEU VAL ARG ASP SEQRES 14 D 227 MET THR THR CYS PRO LEU PRO LYS GLY THR LEU ASP GLY SEQRES 15 D 227 PHE VAL ALA HIS ASP SER ILE HIS ASP CYS ALA LYS ASP SEQRES 16 D 227 ILE LEU MET MET LYS TYR ALA LEU ARG TYR ALA MET GLY SEQRES 17 D 227 LEU GLU ASP ALA PRO SER GLU GLU GLU CYS ASP PRO LEU SEQRES 18 D 227 SER LEU PRO THR LYS ARG HELIX 1 AA1 THR A 36 GLY A 44 1 9 HELIX 2 AA2 ASP A 50 LYS A 55 1 6 HELIX 3 AA3 THR A 61 ASN A 70 1 10 HELIX 4 AA4 GLU A 74 ALA A 80 5 7 HELIX 5 AA5 SER A 87 ALA A 101 1 15 HELIX 6 AA6 GLY A 115 ASN A 134 1 20 HELIX 7 AA7 SER A 137 LEU A 141 5 5 HELIX 8 AA8 LYS A 150 TRP A 152 5 3 HELIX 9 AA9 ILE A 157 LEU A 166 1 10 HELIX 10 AB1 ASP A 187 GLY A 208 1 22 HELIX 11 AB2 THR B 36 GLY B 44 1 9 HELIX 12 AB3 LEU B 51 LYS B 55 5 5 HELIX 13 AB4 THR B 61 ASN B 70 1 10 HELIX 14 AB5 GLU B 74 ASN B 78 5 5 HELIX 15 AB6 SER B 87 HIS B 102 1 16 HELIX 16 AB7 PHE B 118 ASN B 134 1 17 HELIX 17 AB8 THR B 143 GLU B 147 5 5 HELIX 18 AB9 LYS B 150 GLN B 154 5 5 HELIX 19 AC1 ASP B 156 LEU B 166 1 11 HELIX 20 AC2 ASP B 187 GLY B 208 1 22 HELIX 21 AC3 PHE C 37 SER C 42 1 6 HELIX 22 AC4 LEU C 51 LYS C 55 5 5 HELIX 23 AC5 THR C 61 LYS C 69 1 9 HELIX 24 AC6 SER C 72 ALA C 80 1 9 HELIX 25 AC7 SER C 87 ALA C 101 1 15 HELIX 26 AC8 PHE C 118 ASN C 134 1 17 HELIX 27 AC9 SER C 137 LEU C 141 5 5 HELIX 28 AD1 ILE C 157 LEU C 165 1 9 HELIX 29 AD2 ASP C 187 ALA C 206 1 20 HELIX 30 AD3 PHE D 37 GLY D 44 1 8 HELIX 31 AD4 THR D 61 ASN D 70 1 10 HELIX 32 AD5 SER D 72 ASN D 78 1 7 HELIX 33 AD6 SER D 87 ALA D 101 1 15 HELIX 34 AD7 PHE D 118 LEU D 133 1 16 HELIX 35 AD8 THR D 143 GLU D 147 5 5 HELIX 36 AD9 ASP D 156 LEU D 165 1 10 HELIX 37 AE1 ASP D 187 GLY D 208 1 22 SHEET 1 AA1 6 ASP A 85 VAL A 86 0 SHEET 2 AA1 6 ILE A 45 PHE A 49 1 N LYS A 48 O VAL A 86 SHEET 3 AA1 6 VAL A 19 PHE A 27 -1 N LEU A 22 O ILE A 47 SHEET 4 AA1 6 ASP A 3 THR A 10 -1 N GLU A 9 O ILE A 20 SHEET 5 AA1 6 GLY A 111 CYS A 113 1 O TRP A 112 N ILE A 6 SHEET 6 AA1 6 GLN A 154 ASP A 156 1 O ARG A 155 N GLY A 111 SHEET 1 AA2 4 ILE B 45 LYS B 48 0 SHEET 2 AA2 4 VAL B 19 PHE B 27 -1 N LEU B 22 O ILE B 47 SHEET 3 AA2 4 ASP B 3 THR B 10 -1 N GLU B 9 O ILE B 20 SHEET 4 AA2 4 GLY B 111 TRP B 112 1 O TRP B 112 N PHE B 4 SHEET 1 AA3 5 ILE C 45 LYS C 48 0 SHEET 2 AA3 5 VAL C 19 PHE C 27 -1 N LEU C 22 O ILE C 47 SHEET 3 AA3 5 ASP C 3 THR C 10 -1 N GLU C 9 O ILE C 20 SHEET 4 AA3 5 GLY C 111 CYS C 113 1 O TRP C 112 N ILE C 6 SHEET 5 AA3 5 ARG C 155 ASP C 156 1 O ARG C 155 N GLY C 111 SHEET 1 AA4 3 PHE D 8 THR D 10 0 SHEET 2 AA4 3 VAL D 19 PHE D 27 -1 O ILE D 20 N GLU D 9 SHEET 3 AA4 3 ILE D 45 LYS D 48 -1 O ILE D 47 N LEU D 22 SHEET 1 AA5 4 PHE D 8 THR D 10 0 SHEET 2 AA5 4 VAL D 19 PHE D 27 -1 O ILE D 20 N GLU D 9 SHEET 3 AA5 4 ASP D 3 ILE D 5 -1 N ASP D 3 O PHE D 27 SHEET 4 AA5 4 GLY D 111 TRP D 112 1 O TRP D 112 N PHE D 4 CRYST1 84.548 76.285 108.009 90.00 93.36 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011828 0.000000 0.000694 0.00000 SCALE2 0.000000 0.013109 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009274 0.00000 MTRIX1 1 0.951793 -0.278577 -0.128391 9.74156 1 MTRIX2 1 -0.278492 -0.960251 0.018978 19.32619 1 MTRIX3 1 -0.128574 0.017693 -0.991542 106.64757 1 MTRIX1 2 0.981568 -0.176777 -0.072625 44.67004 1 MTRIX2 2 0.173819 0.983737 -0.045264 19.96659 1 MTRIX3 2 0.079446 0.031806 0.996332 54.15795 1 MASTER 426 0 0 37 22 0 0 12 6550 4 0 72 END