HEADER ALLERGEN 15-MAR-23 8OFD TITLE CRYSTAL STRUCTURE OF BETA-CONGLUTIN FROM LUPINUS ALBUS REFINED TO 2.81 TITLE 2 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONGLUTIN BETA 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN LUP-1; COMPND 5 OTHER_DETAILS: 1-30 - SIGNAL PROTEIN (NOT PRESENT) 31-108 - COMPND 6 PROPEPTIDE (NOT PRESENT) 109-531 - CONGLUTIN BETA 1. RESIDUES 408-415 COMPND 7 AND 518-531 NOT INCLUDED. RESIDUE 176 CHANGED FROM L TO I BASED ON COMPND 8 EXPERIMENTAL DATA. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LUPINUS ALBUS; SOURCE 3 ORGANISM_COMMON: WHITE LUPINE, LUPINUS TERMIS; SOURCE 4 ORGANISM_TAXID: 3870 KEYWDS BETA-CONGLUTIN, LUP AN 1, SEED STORAGE PROTEIN, ALLERGEN EXPDTA X-RAY DIFFRACTION AUTHOR R.M.DOLOT,C.K.O'SULLIVAN,M.JAUSET-RUBIO REVDAT 1 14-JUN-23 8OFD 0 JRNL AUTH R.M.DOLOT,C.K.O'SULLIVAN,M.JAUSET-RUBIO JRNL TITL FIRST CRYSTAL STRUCTURE OF BETA-CONGLUTIN, A MAJOR LUPIN JRNL TITL 2 ALLERGEN FROM LUPINUS ALBUS SEEDS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0411 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15686 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.934 REMARK 3 FREE R VALUE TEST SET COUNT : 774 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1077 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.4420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3281 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.89500 REMARK 3 B22 (A**2) : 0.89500 REMARK 3 B33 (A**2) : -1.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.080 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.303 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.270 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.911 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.844 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3367 ; 0.005 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3139 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4553 ; 1.317 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7195 ; 0.439 ; 1.570 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 403 ; 8.748 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 33 ;11.377 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 586 ;20.804 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 476 ; 0.058 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4162 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 874 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 803 ; 0.228 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 162 ; 0.242 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1613 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 141 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.159 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1613 ; 4.955 ; 6.211 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1612 ; 4.941 ; 6.212 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2015 ; 7.673 ;11.142 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2016 ; 7.672 ;11.144 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1754 ; 5.080 ; 6.659 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1755 ; 5.079 ; 6.658 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2538 ; 7.904 ;12.003 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2539 ; 7.903 ;12.002 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8OFD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292128847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU PHOTONJET-S REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-6000HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO 1.171.41.100 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15700 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.810 REMARK 200 RESOLUTION RANGE LOW (A) : 21.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.17000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.40 REMARK 200 R MERGE FOR SHELL (I) : 1.00100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.9.02 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% (V/V) TACSIMATE PH 7.0, 50 MM REMARK 280 HEPES PH 7.0, 2 MM SPERMINE, AND 2 MM HEXAAMINE COBALT (III), REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 83.31500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -144.30581 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 166.63000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 602 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 408 REMARK 465 GLN A 409 REMARK 465 GLN A 410 REMARK 465 ASP A 411 REMARK 465 GLU A 412 REMARK 465 GLN A 413 REMARK 465 GLU A 414 REMARK 465 GLU A 415 REMARK 465 LYS A 518 REMARK 465 GLU A 519 REMARK 465 GLY A 520 REMARK 465 ARG A 521 REMARK 465 ARG A 522 REMARK 465 GLY A 523 REMARK 465 ARG A 524 REMARK 465 ARG A 525 REMARK 465 GLY A 526 REMARK 465 PRO A 527 REMARK 465 ILE A 528 REMARK 465 SER A 529 REMARK 465 SER A 530 REMARK 465 ILE A 531 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 706 O HOH A 735 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 111 85.36 79.39 REMARK 500 SER A 119 -39.14 -32.76 REMARK 500 ARG A 121 6.45 -67.51 REMARK 500 TYR A 126 109.56 -169.36 REMARK 500 ASN A 128 -168.73 -125.51 REMARK 500 PHE A 139 -15.98 -46.75 REMARK 500 GLN A 141 -92.02 -70.70 REMARK 500 LEU A 146 58.67 -118.31 REMARK 500 ASN A 162 75.05 44.92 REMARK 500 ALA A 172 147.05 -173.83 REMARK 500 ASN A 180 117.73 -170.23 REMARK 500 ASP A 191 -90.44 -100.07 REMARK 500 PRO A 207 176.78 -59.30 REMARK 500 ASN A 220 8.33 -153.55 REMARK 500 PRO A 231 152.66 -47.52 REMARK 500 LEU A 277 -77.85 -113.17 REMARK 500 ASP A 281 89.84 -160.36 REMARK 500 GLU A 282 52.08 -107.92 REMARK 500 GLN A 283 -142.92 -144.50 REMARK 500 GLU A 284 142.11 -173.22 REMARK 500 TYR A 285 -50.70 -140.48 REMARK 500 GLU A 286 47.81 29.58 REMARK 500 GLN A 288 150.90 70.32 REMARK 500 ARG A 290 -72.72 -173.64 REMARK 500 GLN A 292 -93.74 -168.53 REMARK 500 SER A 295 -66.85 67.01 REMARK 500 HIS A 296 -40.30 -151.86 REMARK 500 SER A 320 -84.37 -84.80 REMARK 500 SER A 321 -82.11 43.55 REMARK 500 PRO A 326 92.01 -41.38 REMARK 500 SER A 327 -154.74 -110.10 REMARK 500 ASN A 343 -158.74 -150.99 REMARK 500 GLU A 350 128.57 -173.89 REMARK 500 ARG A 355 40.55 -105.62 REMARK 500 ASN A 356 80.74 -165.31 REMARK 500 GLN A 406 -128.51 66.97 REMARK 500 GLU A 418 117.11 -22.34 REMARK 500 ALA A 437 131.93 -33.79 REMARK 500 ASN A 448 105.30 -53.35 REMARK 500 GLU A 460 14.03 82.32 REMARK 500 TYR A 504 -67.85 73.70 REMARK 500 GLN A 512 -139.76 -155.22 REMARK 500 GLN A 514 106.66 164.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 121 0.07 SIDE CHAIN REMARK 500 ARG A 153 0.12 SIDE CHAIN REMARK 500 ARG A 205 0.09 SIDE CHAIN REMARK 500 ARG A 304 0.12 SIDE CHAIN REMARK 500 ARG A 355 0.08 SIDE CHAIN REMARK 500 ARG A 426 0.07 SIDE CHAIN REMARK 500 ARG A 450 0.11 SIDE CHAIN REMARK 500 ARG A 475 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 777 DISTANCE = 7.22 ANGSTROMS REMARK 525 HOH A 778 DISTANCE = 7.44 ANGSTROMS REMARK 525 HOH A 779 DISTANCE = 7.53 ANGSTROMS REMARK 525 HOH A 780 DISTANCE = 7.65 ANGSTROMS REMARK 525 HOH A 781 DISTANCE = 7.80 ANGSTROMS REMARK 525 HOH A 782 DISTANCE = 8.14 ANGSTROMS DBREF 8OFD A 109 531 UNP Q53HY0 CONB1_LUPAL 109 531 SEQADV 8OFD ILE A 176 UNP Q53HY0 LEU 176 VARIANT SEQRES 1 A 423 ARG ARG GLN ARG ASN PRO TYR HIS PHE ASN SER GLN ARG SEQRES 2 A 423 PHE GLN THR LEU TYR LYS ASN ARG ASN GLY LYS ILE ARG SEQRES 3 A 423 VAL LEU GLU ARG PHE ASP GLN ARG THR ASN ARG LEU GLU SEQRES 4 A 423 ASN LEU GLN ASN TYR ARG ILE VAL GLU PHE GLN SER LYS SEQRES 5 A 423 PRO ASN THR LEU ILE LEU PRO LYS HIS SER ASP ALA ASP SEQRES 6 A 423 TYR VAL ILE VAL VAL LEU ASN GLY ARG ALA THR ILE THR SEQRES 7 A 423 ILE VAL ASN PRO ASP ARG ARG GLN ALA TYR ASN LEU GLU SEQRES 8 A 423 TYR GLY ASP ALA LEU ARG ILE PRO ALA GLY SER THR SER SEQRES 9 A 423 TYR ILE LEU ASN PRO ASP ASP ASN GLN LYS LEU ARG VAL SEQRES 10 A 423 VAL LYS LEU ALA ILE PRO ILE ASN ASN PRO GLY TYR PHE SEQRES 11 A 423 TYR ASP PHE TYR PRO SER SER THR LYS ASP GLN GLN SER SEQRES 12 A 423 TYR PHE SER GLY PHE SER ARG ASN THR LEU GLU ALA THR SEQRES 13 A 423 PHE ASN THR ARG TYR GLU GLU ILE GLN ARG ILE LEU LEU SEQRES 14 A 423 GLY ASN GLU ASP GLU GLN GLU TYR GLU GLU GLN ARG ARG SEQRES 15 A 423 GLY GLN GLU GLN SER HIS GLN ASP GLU GLY VAL ILE VAL SEQRES 16 A 423 ARG VAL SER ARG GLU GLN ILE GLN GLU LEU THR LYS TYR SEQRES 17 A 423 ALA GLN SER SER SER GLY LYS ASP LYS PRO SER GLN SER SEQRES 18 A 423 GLY PRO PHE ASN LEU ARG SER ASN GLU PRO ILE TYR SER SEQRES 19 A 423 ASN LYS TYR GLY ASN PHE TYR GLU ILE THR PRO ASP ARG SEQRES 20 A 423 ASN PRO GLN VAL GLN ASP LEU ASP ILE SER LEU THR PHE SEQRES 21 A 423 THR GLU ILE ASN GLU GLY ALA LEU LEU LEU PRO HIS TYR SEQRES 22 A 423 ASN SER LYS ALA ILE PHE ILE VAL VAL VAL GLY GLU GLY SEQRES 23 A 423 ASN GLY LYS TYR GLU LEU VAL GLY ILE ARG ASP GLN GLN SEQRES 24 A 423 ARG GLN GLN ASP GLU GLN GLU GLU GLU PRO GLU GLU VAL SEQRES 25 A 423 ARG ARG TYR SER ALA ARG LEU SER GLU GLY ASP ILE PHE SEQRES 26 A 423 VAL ILE PRO ALA GLY TYR PRO ILE SER VAL ASN ALA SER SEQRES 27 A 423 SER ASN LEU ARG LEU LEU GLY PHE GLY ILE ASN ALA TYR SEQRES 28 A 423 GLU ASN GLN ARG ASN PHE LEU ALA GLY SER GLU ASP ASN SEQRES 29 A 423 VAL ILE ARG GLN LEU ASP ARG GLU VAL LYS GLU LEU THR SEQRES 30 A 423 PHE PRO GLY SER ALA GLU ASP ILE GLU ARG LEU ILE LYS SEQRES 31 A 423 ASN GLN GLN GLN SER TYR PHE ALA ASN ALA LEU PRO GLN SEQRES 32 A 423 GLN GLN GLN GLN SER GLU LYS GLU GLY ARG ARG GLY ARG SEQRES 33 A 423 ARG GLY PRO ILE SER SER ILE HET ACT A 601 4 HET NA A 602 1 HET K A 603 1 HETNAM ACT ACETATE ION HETNAM NA SODIUM ION HETNAM K POTASSIUM ION FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 NA NA 1+ FORMUL 4 K K 1+ FORMUL 5 HOH *82(H2 O) HELIX 1 AA1 ASN A 118 GLN A 120 5 3 HELIX 2 AA2 SER A 251 PHE A 256 5 6 HELIX 3 AA3 SER A 257 ASN A 266 1 10 HELIX 4 AA4 ARG A 268 LEU A 277 1 10 HELIX 5 AA5 SER A 306 LYS A 315 1 10 HELIX 6 AA6 THR A 352 ASN A 356 5 5 HELIX 7 AA7 ASP A 478 PHE A 486 1 9 HELIX 8 AA8 SER A 489 ASN A 499 1 11 SHEET 1 AA1 7 HIS A 116 PHE A 117 0 SHEET 2 AA1 7 ILE A 432 ILE A 435 -1 O ILE A 432 N PHE A 117 SHEET 3 AA1 7 ILE A 386 GLU A 393 -1 N VAL A 389 O PHE A 433 SHEET 4 AA1 7 LEU A 449 ILE A 456 -1 O PHE A 454 N ILE A 388 SHEET 5 AA1 7 SER A 365 ILE A 371 -1 N ILE A 371 O LEU A 449 SHEET 6 AA1 7 GLY A 346 ILE A 351 -1 N ASN A 347 O GLU A 370 SHEET 7 AA1 7 TYR A 341 ASN A 343 -1 N TYR A 341 O PHE A 348 SHEET 1 AA2 7 PHE A 122 LYS A 127 0 SHEET 2 AA2 7 GLY A 131 LEU A 136 -1 O VAL A 135 N GLN A 123 SHEET 3 AA2 7 ARG A 153 SER A 159 -1 O GLN A 158 N LYS A 132 SHEET 4 AA2 7 LEU A 223 PRO A 231 -1 O LYS A 227 N VAL A 155 SHEET 5 AA2 7 ALA A 172 ASN A 180 -1 N VAL A 177 O VAL A 226 SHEET 6 AA2 7 ASP A 202 ILE A 206 -1 O LEU A 204 N ILE A 176 SHEET 7 AA2 7 PHE A 332 ASN A 333 -1 O PHE A 332 N ALA A 203 SHEET 1 AA3 2 THR A 163 ILE A 165 0 SHEET 2 AA3 2 ILE A 302 ARG A 304 -1 O VAL A 303 N LEU A 164 SHEET 1 AA4 2 HIS A 169 SER A 170 0 SHEET 2 AA4 2 ASP A 240 PHE A 241 -1 O PHE A 241 N HIS A 169 SHEET 1 AA5 3 ARG A 193 LEU A 198 0 SHEET 2 AA5 3 ALA A 183 VAL A 188 -1 N ILE A 185 O TYR A 196 SHEET 3 AA5 3 THR A 211 LEU A 215 -1 O THR A 211 N VAL A 188 SHEET 1 AA6 5 VAL A 420 LEU A 427 0 SHEET 2 AA6 5 GLY A 396 ILE A 403 -1 N GLY A 402 O ARG A 421 SHEET 3 AA6 5 PRO A 440 ASN A 444 -1 O ASN A 444 N LYS A 397 SHEET 4 AA6 5 ALA A 375 ASN A 382 -1 N HIS A 380 O ILE A 441 SHEET 5 AA6 5 ARG A 463 PHE A 465 -1 O ASN A 464 N TYR A 381 SHEET 1 AA7 5 VAL A 420 LEU A 427 0 SHEET 2 AA7 5 GLY A 396 ILE A 403 -1 N GLY A 402 O ARG A 421 SHEET 3 AA7 5 PRO A 440 ASN A 444 -1 O ASN A 444 N LYS A 397 SHEET 4 AA7 5 ALA A 375 ASN A 382 -1 N HIS A 380 O ILE A 441 SHEET 5 AA7 5 PHE A 505 ASN A 507 -1 O ALA A 506 N LEU A 376 CRYST1 166.630 166.630 40.098 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006001 0.003465 0.000000 0.00000 SCALE2 0.000000 0.006930 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024939 0.00000