HEADER DNA BINDING PROTEIN 24-MAR-23 8OJJ TITLE CRYO-EM STRUCTURE OF THE DNAD-NTD TETRAMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPLICATION PROTEIN DNAD; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: DNAD, BSU22350; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS REPLICATION HELICASE LOADING, SMALL CRYO-EM STRUCTURE, DNA BINDING KEYWDS 2 PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR C.WINTERHALTER,S.PELLICIARI,N.CRONIN,T.R.D.COSTA,H.MURRAY,A.ILANGOVAN REVDAT 3 24-JUL-24 8OJJ 1 REMARK REVDAT 2 31-MAY-23 8OJJ 1 JRNL REVDAT 1 17-MAY-23 8OJJ 0 JRNL AUTH C.WINTERHALTER,S.PELLICIARI,D.STEVENS,S.FENYK,E.MARCHAND, JRNL AUTH 2 N.B.CRONIN,P.SOULTANAS,T.R.D.COSTA,A.ILANGOVAN,H.MURRAY JRNL TITL THE DNA REPLICATION INITIATION PROTEIN DNAD RECOGNISES A JRNL TITL 2 SPECIFIC STRAND OF THE BACILLUS SUBTILIS CHROMOSOME ORIGIN. JRNL REF NUCLEIC ACIDS RES. V. 51 4322 2023 JRNL REFN ESSN 1362-4962 JRNL PMID 37093985 JRNL DOI 10.1093/NAR/GKAD277 REMARK 2 REMARK 2 RESOLUTION. 5.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 5.470 REMARK 3 NUMBER OF PARTICLES : 443529 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8OJJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292129387. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HOMO TETRAMERIC COMPLEX OF DNAD REMARK 245 N-TERMINAL DOMAIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 700.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2700.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 116 REMARK 465 THR A 117 REMARK 465 GLN A 118 REMARK 465 GLU A 119 REMARK 465 ARG A 120 REMARK 465 LYS A 121 REMARK 465 ALA A 122 REMARK 465 GLU A 123 REMARK 465 GLY A 124 REMARK 465 GLU A 125 REMARK 465 GLN A 126 REMARK 465 LYS A 127 REMARK 465 SER A 128 REMARK 465 LEU A 129 REMARK 465 TYR A 130 REMARK 465 THR A 131 REMARK 465 ILE A 132 REMARK 465 PHE A 133 REMARK 465 GLU A 134 REMARK 465 GLU A 135 REMARK 465 GLU A 136 REMARK 465 PHE A 137 REMARK 465 ALA A 138 REMARK 465 ARG A 139 REMARK 465 PRO A 140 REMARK 465 LEU A 141 REMARK 465 SER A 142 REMARK 465 PRO A 143 REMARK 465 LEU A 144 REMARK 465 GLU A 145 REMARK 465 CYS A 146 REMARK 465 GLU A 147 REMARK 465 THR A 148 REMARK 465 LEU A 149 REMARK 465 ALA A 150 REMARK 465 ILE A 151 REMARK 465 TRP A 152 REMARK 465 GLN A 153 REMARK 465 ASP A 154 REMARK 465 GLN A 155 REMARK 465 ASP A 156 REMARK 465 GLN A 157 REMARK 465 HIS A 158 REMARK 465 ASP A 159 REMARK 465 ALA A 160 REMARK 465 GLN A 161 REMARK 465 LEU A 162 REMARK 465 ILE A 163 REMARK 465 LYS A 164 REMARK 465 HIS A 165 REMARK 465 ALA A 166 REMARK 465 LEU A 167 REMARK 465 LYS A 168 REMARK 465 GLU A 169 REMARK 465 ALA A 170 REMARK 465 VAL A 171 REMARK 465 LEU A 172 REMARK 465 SER A 173 REMARK 465 GLY A 174 REMARK 465 LYS A 175 REMARK 465 LEU A 176 REMARK 465 SER A 177 REMARK 465 PHE A 178 REMARK 465 ARG A 179 REMARK 465 TYR A 180 REMARK 465 ILE A 181 REMARK 465 ASP A 182 REMARK 465 ARG A 183 REMARK 465 ILE A 184 REMARK 465 LEU A 185 REMARK 465 PHE A 186 REMARK 465 GLU A 187 REMARK 465 TRP A 188 REMARK 465 LYS A 189 REMARK 465 LYS A 190 REMARK 465 ASN A 191 REMARK 465 GLY A 192 REMARK 465 LEU A 193 REMARK 465 LYS A 194 REMARK 465 THR A 195 REMARK 465 VAL A 196 REMARK 465 GLU A 197 REMARK 465 GLN A 198 REMARK 465 ALA A 199 REMARK 465 LYS A 200 REMARK 465 ILE A 201 REMARK 465 HIS A 202 REMARK 465 SER A 203 REMARK 465 GLN A 204 REMARK 465 LYS A 205 REMARK 465 PHE A 206 REMARK 465 ARG A 207 REMARK 465 ARG A 208 REMARK 465 VAL A 209 REMARK 465 GLN A 210 REMARK 465 ALA A 211 REMARK 465 LYS A 212 REMARK 465 GLN A 213 REMARK 465 ASN A 214 REMARK 465 GLU A 215 REMARK 465 PRO A 216 REMARK 465 GLN A 217 REMARK 465 LYS A 218 REMARK 465 GLU A 219 REMARK 465 TYR A 220 REMARK 465 LYS A 221 REMARK 465 ARG A 222 REMARK 465 GLN A 223 REMARK 465 VAL A 224 REMARK 465 PRO A 225 REMARK 465 PHE A 226 REMARK 465 TYR A 227 REMARK 465 ASN A 228 REMARK 465 TRP A 229 REMARK 465 LEU A 230 REMARK 465 GLU A 231 REMARK 465 GLN A 232 REMARK 465 GLN B 116 REMARK 465 THR B 117 REMARK 465 GLN B 118 REMARK 465 GLU B 119 REMARK 465 ARG B 120 REMARK 465 LYS B 121 REMARK 465 ALA B 122 REMARK 465 GLU B 123 REMARK 465 GLY B 124 REMARK 465 GLU B 125 REMARK 465 GLN B 126 REMARK 465 LYS B 127 REMARK 465 SER B 128 REMARK 465 LEU B 129 REMARK 465 TYR B 130 REMARK 465 THR B 131 REMARK 465 ILE B 132 REMARK 465 PHE B 133 REMARK 465 GLU B 134 REMARK 465 GLU B 135 REMARK 465 GLU B 136 REMARK 465 PHE B 137 REMARK 465 ALA B 138 REMARK 465 ARG B 139 REMARK 465 PRO B 140 REMARK 465 LEU B 141 REMARK 465 SER B 142 REMARK 465 PRO B 143 REMARK 465 LEU B 144 REMARK 465 GLU B 145 REMARK 465 CYS B 146 REMARK 465 GLU B 147 REMARK 465 THR B 148 REMARK 465 LEU B 149 REMARK 465 ALA B 150 REMARK 465 ILE B 151 REMARK 465 TRP B 152 REMARK 465 GLN B 153 REMARK 465 ASP B 154 REMARK 465 GLN B 155 REMARK 465 ASP B 156 REMARK 465 GLN B 157 REMARK 465 HIS B 158 REMARK 465 ASP B 159 REMARK 465 ALA B 160 REMARK 465 GLN B 161 REMARK 465 LEU B 162 REMARK 465 ILE B 163 REMARK 465 LYS B 164 REMARK 465 HIS B 165 REMARK 465 ALA B 166 REMARK 465 LEU B 167 REMARK 465 LYS B 168 REMARK 465 GLU B 169 REMARK 465 ALA B 170 REMARK 465 VAL B 171 REMARK 465 LEU B 172 REMARK 465 SER B 173 REMARK 465 GLY B 174 REMARK 465 LYS B 175 REMARK 465 LEU B 176 REMARK 465 SER B 177 REMARK 465 PHE B 178 REMARK 465 ARG B 179 REMARK 465 TYR B 180 REMARK 465 ILE B 181 REMARK 465 ASP B 182 REMARK 465 ARG B 183 REMARK 465 ILE B 184 REMARK 465 LEU B 185 REMARK 465 PHE B 186 REMARK 465 GLU B 187 REMARK 465 TRP B 188 REMARK 465 LYS B 189 REMARK 465 LYS B 190 REMARK 465 ASN B 191 REMARK 465 GLY B 192 REMARK 465 LEU B 193 REMARK 465 LYS B 194 REMARK 465 THR B 195 REMARK 465 VAL B 196 REMARK 465 GLU B 197 REMARK 465 GLN B 198 REMARK 465 ALA B 199 REMARK 465 LYS B 200 REMARK 465 ILE B 201 REMARK 465 HIS B 202 REMARK 465 SER B 203 REMARK 465 GLN B 204 REMARK 465 LYS B 205 REMARK 465 PHE B 206 REMARK 465 ARG B 207 REMARK 465 ARG B 208 REMARK 465 VAL B 209 REMARK 465 GLN B 210 REMARK 465 ALA B 211 REMARK 465 LYS B 212 REMARK 465 GLN B 213 REMARK 465 ASN B 214 REMARK 465 GLU B 215 REMARK 465 PRO B 216 REMARK 465 GLN B 217 REMARK 465 LYS B 218 REMARK 465 GLU B 219 REMARK 465 TYR B 220 REMARK 465 LYS B 221 REMARK 465 ARG B 222 REMARK 465 GLN B 223 REMARK 465 VAL B 224 REMARK 465 PRO B 225 REMARK 465 PHE B 226 REMARK 465 TYR B 227 REMARK 465 ASN B 228 REMARK 465 TRP B 229 REMARK 465 LEU B 230 REMARK 465 GLU B 231 REMARK 465 GLN B 232 REMARK 465 GLN C 116 REMARK 465 THR C 117 REMARK 465 GLN C 118 REMARK 465 GLU C 119 REMARK 465 ARG C 120 REMARK 465 LYS C 121 REMARK 465 ALA C 122 REMARK 465 GLU C 123 REMARK 465 GLY C 124 REMARK 465 GLU C 125 REMARK 465 GLN C 126 REMARK 465 LYS C 127 REMARK 465 SER C 128 REMARK 465 LEU C 129 REMARK 465 TYR C 130 REMARK 465 THR C 131 REMARK 465 ILE C 132 REMARK 465 PHE C 133 REMARK 465 GLU C 134 REMARK 465 GLU C 135 REMARK 465 GLU C 136 REMARK 465 PHE C 137 REMARK 465 ALA C 138 REMARK 465 ARG C 139 REMARK 465 PRO C 140 REMARK 465 LEU C 141 REMARK 465 SER C 142 REMARK 465 PRO C 143 REMARK 465 LEU C 144 REMARK 465 GLU C 145 REMARK 465 CYS C 146 REMARK 465 GLU C 147 REMARK 465 THR C 148 REMARK 465 LEU C 149 REMARK 465 ALA C 150 REMARK 465 ILE C 151 REMARK 465 TRP C 152 REMARK 465 GLN C 153 REMARK 465 ASP C 154 REMARK 465 GLN C 155 REMARK 465 ASP C 156 REMARK 465 GLN C 157 REMARK 465 HIS C 158 REMARK 465 ASP C 159 REMARK 465 ALA C 160 REMARK 465 GLN C 161 REMARK 465 LEU C 162 REMARK 465 ILE C 163 REMARK 465 LYS C 164 REMARK 465 HIS C 165 REMARK 465 ALA C 166 REMARK 465 LEU C 167 REMARK 465 LYS C 168 REMARK 465 GLU C 169 REMARK 465 ALA C 170 REMARK 465 VAL C 171 REMARK 465 LEU C 172 REMARK 465 SER C 173 REMARK 465 GLY C 174 REMARK 465 LYS C 175 REMARK 465 LEU C 176 REMARK 465 SER C 177 REMARK 465 PHE C 178 REMARK 465 ARG C 179 REMARK 465 TYR C 180 REMARK 465 ILE C 181 REMARK 465 ASP C 182 REMARK 465 ARG C 183 REMARK 465 ILE C 184 REMARK 465 LEU C 185 REMARK 465 PHE C 186 REMARK 465 GLU C 187 REMARK 465 TRP C 188 REMARK 465 LYS C 189 REMARK 465 LYS C 190 REMARK 465 ASN C 191 REMARK 465 GLY C 192 REMARK 465 LEU C 193 REMARK 465 LYS C 194 REMARK 465 THR C 195 REMARK 465 VAL C 196 REMARK 465 GLU C 197 REMARK 465 GLN C 198 REMARK 465 ALA C 199 REMARK 465 LYS C 200 REMARK 465 ILE C 201 REMARK 465 HIS C 202 REMARK 465 SER C 203 REMARK 465 GLN C 204 REMARK 465 LYS C 205 REMARK 465 PHE C 206 REMARK 465 ARG C 207 REMARK 465 ARG C 208 REMARK 465 VAL C 209 REMARK 465 GLN C 210 REMARK 465 ALA C 211 REMARK 465 LYS C 212 REMARK 465 GLN C 213 REMARK 465 ASN C 214 REMARK 465 GLU C 215 REMARK 465 PRO C 216 REMARK 465 GLN C 217 REMARK 465 LYS C 218 REMARK 465 GLU C 219 REMARK 465 TYR C 220 REMARK 465 LYS C 221 REMARK 465 ARG C 222 REMARK 465 GLN C 223 REMARK 465 VAL C 224 REMARK 465 PRO C 225 REMARK 465 PHE C 226 REMARK 465 TYR C 227 REMARK 465 ASN C 228 REMARK 465 TRP C 229 REMARK 465 LEU C 230 REMARK 465 GLU C 231 REMARK 465 GLN C 232 REMARK 465 GLN D 116 REMARK 465 THR D 117 REMARK 465 GLN D 118 REMARK 465 GLU D 119 REMARK 465 ARG D 120 REMARK 465 LYS D 121 REMARK 465 ALA D 122 REMARK 465 GLU D 123 REMARK 465 GLY D 124 REMARK 465 GLU D 125 REMARK 465 GLN D 126 REMARK 465 LYS D 127 REMARK 465 SER D 128 REMARK 465 LEU D 129 REMARK 465 TYR D 130 REMARK 465 THR D 131 REMARK 465 ILE D 132 REMARK 465 PHE D 133 REMARK 465 GLU D 134 REMARK 465 GLU D 135 REMARK 465 GLU D 136 REMARK 465 PHE D 137 REMARK 465 ALA D 138 REMARK 465 ARG D 139 REMARK 465 PRO D 140 REMARK 465 LEU D 141 REMARK 465 SER D 142 REMARK 465 PRO D 143 REMARK 465 LEU D 144 REMARK 465 GLU D 145 REMARK 465 CYS D 146 REMARK 465 GLU D 147 REMARK 465 THR D 148 REMARK 465 LEU D 149 REMARK 465 ALA D 150 REMARK 465 ILE D 151 REMARK 465 TRP D 152 REMARK 465 GLN D 153 REMARK 465 ASP D 154 REMARK 465 GLN D 155 REMARK 465 ASP D 156 REMARK 465 GLN D 157 REMARK 465 HIS D 158 REMARK 465 ASP D 159 REMARK 465 ALA D 160 REMARK 465 GLN D 161 REMARK 465 LEU D 162 REMARK 465 ILE D 163 REMARK 465 LYS D 164 REMARK 465 HIS D 165 REMARK 465 ALA D 166 REMARK 465 LEU D 167 REMARK 465 LYS D 168 REMARK 465 GLU D 169 REMARK 465 ALA D 170 REMARK 465 VAL D 171 REMARK 465 LEU D 172 REMARK 465 SER D 173 REMARK 465 GLY D 174 REMARK 465 LYS D 175 REMARK 465 LEU D 176 REMARK 465 SER D 177 REMARK 465 PHE D 178 REMARK 465 ARG D 179 REMARK 465 TYR D 180 REMARK 465 ILE D 181 REMARK 465 ASP D 182 REMARK 465 ARG D 183 REMARK 465 ILE D 184 REMARK 465 LEU D 185 REMARK 465 PHE D 186 REMARK 465 GLU D 187 REMARK 465 TRP D 188 REMARK 465 LYS D 189 REMARK 465 LYS D 190 REMARK 465 ASN D 191 REMARK 465 GLY D 192 REMARK 465 LEU D 193 REMARK 465 LYS D 194 REMARK 465 THR D 195 REMARK 465 VAL D 196 REMARK 465 GLU D 197 REMARK 465 GLN D 198 REMARK 465 ALA D 199 REMARK 465 LYS D 200 REMARK 465 ILE D 201 REMARK 465 HIS D 202 REMARK 465 SER D 203 REMARK 465 GLN D 204 REMARK 465 LYS D 205 REMARK 465 PHE D 206 REMARK 465 ARG D 207 REMARK 465 ARG D 208 REMARK 465 VAL D 209 REMARK 465 GLN D 210 REMARK 465 ALA D 211 REMARK 465 LYS D 212 REMARK 465 GLN D 213 REMARK 465 ASN D 214 REMARK 465 GLU D 215 REMARK 465 PRO D 216 REMARK 465 GLN D 217 REMARK 465 LYS D 218 REMARK 465 GLU D 219 REMARK 465 TYR D 220 REMARK 465 LYS D 221 REMARK 465 ARG D 222 REMARK 465 GLN D 223 REMARK 465 VAL D 224 REMARK 465 PRO D 225 REMARK 465 PHE D 226 REMARK 465 TYR D 227 REMARK 465 ASN D 228 REMARK 465 TRP D 229 REMARK 465 LEU D 230 REMARK 465 GLU D 231 REMARK 465 GLN D 232 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD2 LEU A 20 OE1 GLN B 12 2.09 REMARK 500 CD2 LEU C 20 OE1 GLN D 12 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-16914 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE DNAD-NTD TETRAMER DBREF 8OJJ A 1 232 UNP P39787 DNAD_BACSU 1 232 DBREF 8OJJ B 1 232 UNP P39787 DNAD_BACSU 1 232 DBREF 8OJJ C 1 232 UNP P39787 DNAD_BACSU 1 232 DBREF 8OJJ D 1 232 UNP P39787 DNAD_BACSU 1 232 SEQRES 1 A 232 MET LYS LYS GLN GLN PHE ILE ASP MET GLN GLU GLN GLY SEQRES 2 A 232 THR SER THR ILE PRO ASN LEU LEU LEU THR HIS TYR LYS SEQRES 3 A 232 GLN LEU GLY LEU ASN GLU THR GLU LEU ILE LEU LEU LEU SEQRES 4 A 232 LYS ILE LYS MET HIS LEU GLU LYS GLY SER TYR PHE PRO SEQRES 5 A 232 THR PRO ASN GLN LEU GLN GLU GLY MET SER ILE SER VAL SEQRES 6 A 232 GLU GLU CYS THR ASN ARG LEU ARG MET PHE ILE GLN LYS SEQRES 7 A 232 GLY PHE LEU PHE ILE GLU GLU CYS GLU ASP GLN ASN GLY SEQRES 8 A 232 ILE LYS PHE GLU LYS TYR SER LEU GLN PRO LEU TRP GLY SEQRES 9 A 232 LYS LEU TYR GLU TYR ILE GLN LEU ALA GLN ASN GLN THR SEQRES 10 A 232 GLN GLU ARG LYS ALA GLU GLY GLU GLN LYS SER LEU TYR SEQRES 11 A 232 THR ILE PHE GLU GLU GLU PHE ALA ARG PRO LEU SER PRO SEQRES 12 A 232 LEU GLU CYS GLU THR LEU ALA ILE TRP GLN ASP GLN ASP SEQRES 13 A 232 GLN HIS ASP ALA GLN LEU ILE LYS HIS ALA LEU LYS GLU SEQRES 14 A 232 ALA VAL LEU SER GLY LYS LEU SER PHE ARG TYR ILE ASP SEQRES 15 A 232 ARG ILE LEU PHE GLU TRP LYS LYS ASN GLY LEU LYS THR SEQRES 16 A 232 VAL GLU GLN ALA LYS ILE HIS SER GLN LYS PHE ARG ARG SEQRES 17 A 232 VAL GLN ALA LYS GLN ASN GLU PRO GLN LYS GLU TYR LYS SEQRES 18 A 232 ARG GLN VAL PRO PHE TYR ASN TRP LEU GLU GLN SEQRES 1 B 232 MET LYS LYS GLN GLN PHE ILE ASP MET GLN GLU GLN GLY SEQRES 2 B 232 THR SER THR ILE PRO ASN LEU LEU LEU THR HIS TYR LYS SEQRES 3 B 232 GLN LEU GLY LEU ASN GLU THR GLU LEU ILE LEU LEU LEU SEQRES 4 B 232 LYS ILE LYS MET HIS LEU GLU LYS GLY SER TYR PHE PRO SEQRES 5 B 232 THR PRO ASN GLN LEU GLN GLU GLY MET SER ILE SER VAL SEQRES 6 B 232 GLU GLU CYS THR ASN ARG LEU ARG MET PHE ILE GLN LYS SEQRES 7 B 232 GLY PHE LEU PHE ILE GLU GLU CYS GLU ASP GLN ASN GLY SEQRES 8 B 232 ILE LYS PHE GLU LYS TYR SER LEU GLN PRO LEU TRP GLY SEQRES 9 B 232 LYS LEU TYR GLU TYR ILE GLN LEU ALA GLN ASN GLN THR SEQRES 10 B 232 GLN GLU ARG LYS ALA GLU GLY GLU GLN LYS SER LEU TYR SEQRES 11 B 232 THR ILE PHE GLU GLU GLU PHE ALA ARG PRO LEU SER PRO SEQRES 12 B 232 LEU GLU CYS GLU THR LEU ALA ILE TRP GLN ASP GLN ASP SEQRES 13 B 232 GLN HIS ASP ALA GLN LEU ILE LYS HIS ALA LEU LYS GLU SEQRES 14 B 232 ALA VAL LEU SER GLY LYS LEU SER PHE ARG TYR ILE ASP SEQRES 15 B 232 ARG ILE LEU PHE GLU TRP LYS LYS ASN GLY LEU LYS THR SEQRES 16 B 232 VAL GLU GLN ALA LYS ILE HIS SER GLN LYS PHE ARG ARG SEQRES 17 B 232 VAL GLN ALA LYS GLN ASN GLU PRO GLN LYS GLU TYR LYS SEQRES 18 B 232 ARG GLN VAL PRO PHE TYR ASN TRP LEU GLU GLN SEQRES 1 C 232 MET LYS LYS GLN GLN PHE ILE ASP MET GLN GLU GLN GLY SEQRES 2 C 232 THR SER THR ILE PRO ASN LEU LEU LEU THR HIS TYR LYS SEQRES 3 C 232 GLN LEU GLY LEU ASN GLU THR GLU LEU ILE LEU LEU LEU SEQRES 4 C 232 LYS ILE LYS MET HIS LEU GLU LYS GLY SER TYR PHE PRO SEQRES 5 C 232 THR PRO ASN GLN LEU GLN GLU GLY MET SER ILE SER VAL SEQRES 6 C 232 GLU GLU CYS THR ASN ARG LEU ARG MET PHE ILE GLN LYS SEQRES 7 C 232 GLY PHE LEU PHE ILE GLU GLU CYS GLU ASP GLN ASN GLY SEQRES 8 C 232 ILE LYS PHE GLU LYS TYR SER LEU GLN PRO LEU TRP GLY SEQRES 9 C 232 LYS LEU TYR GLU TYR ILE GLN LEU ALA GLN ASN GLN THR SEQRES 10 C 232 GLN GLU ARG LYS ALA GLU GLY GLU GLN LYS SER LEU TYR SEQRES 11 C 232 THR ILE PHE GLU GLU GLU PHE ALA ARG PRO LEU SER PRO SEQRES 12 C 232 LEU GLU CYS GLU THR LEU ALA ILE TRP GLN ASP GLN ASP SEQRES 13 C 232 GLN HIS ASP ALA GLN LEU ILE LYS HIS ALA LEU LYS GLU SEQRES 14 C 232 ALA VAL LEU SER GLY LYS LEU SER PHE ARG TYR ILE ASP SEQRES 15 C 232 ARG ILE LEU PHE GLU TRP LYS LYS ASN GLY LEU LYS THR SEQRES 16 C 232 VAL GLU GLN ALA LYS ILE HIS SER GLN LYS PHE ARG ARG SEQRES 17 C 232 VAL GLN ALA LYS GLN ASN GLU PRO GLN LYS GLU TYR LYS SEQRES 18 C 232 ARG GLN VAL PRO PHE TYR ASN TRP LEU GLU GLN SEQRES 1 D 232 MET LYS LYS GLN GLN PHE ILE ASP MET GLN GLU GLN GLY SEQRES 2 D 232 THR SER THR ILE PRO ASN LEU LEU LEU THR HIS TYR LYS SEQRES 3 D 232 GLN LEU GLY LEU ASN GLU THR GLU LEU ILE LEU LEU LEU SEQRES 4 D 232 LYS ILE LYS MET HIS LEU GLU LYS GLY SER TYR PHE PRO SEQRES 5 D 232 THR PRO ASN GLN LEU GLN GLU GLY MET SER ILE SER VAL SEQRES 6 D 232 GLU GLU CYS THR ASN ARG LEU ARG MET PHE ILE GLN LYS SEQRES 7 D 232 GLY PHE LEU PHE ILE GLU GLU CYS GLU ASP GLN ASN GLY SEQRES 8 D 232 ILE LYS PHE GLU LYS TYR SER LEU GLN PRO LEU TRP GLY SEQRES 9 D 232 LYS LEU TYR GLU TYR ILE GLN LEU ALA GLN ASN GLN THR SEQRES 10 D 232 GLN GLU ARG LYS ALA GLU GLY GLU GLN LYS SER LEU TYR SEQRES 11 D 232 THR ILE PHE GLU GLU GLU PHE ALA ARG PRO LEU SER PRO SEQRES 12 D 232 LEU GLU CYS GLU THR LEU ALA ILE TRP GLN ASP GLN ASP SEQRES 13 D 232 GLN HIS ASP ALA GLN LEU ILE LYS HIS ALA LEU LYS GLU SEQRES 14 D 232 ALA VAL LEU SER GLY LYS LEU SER PHE ARG TYR ILE ASP SEQRES 15 D 232 ARG ILE LEU PHE GLU TRP LYS LYS ASN GLY LEU LYS THR SEQRES 16 D 232 VAL GLU GLN ALA LYS ILE HIS SER GLN LYS PHE ARG ARG SEQRES 17 D 232 VAL GLN ALA LYS GLN ASN GLU PRO GLN LYS GLU TYR LYS SEQRES 18 D 232 ARG GLN VAL PRO PHE TYR ASN TRP LEU GLU GLN HELIX 1 AA1 LYS A 2 GLY A 13 1 12 HELIX 2 AA2 ASN A 19 GLY A 29 1 11 HELIX 3 AA3 ASN A 31 GLU A 46 1 16 HELIX 4 AA4 THR A 53 GLU A 59 1 7 HELIX 5 AA5 SER A 64 GLY A 79 1 16 HELIX 6 AA6 LEU A 99 ASN A 115 1 17 HELIX 7 AA7 LYS B 2 GLY B 13 1 12 HELIX 8 AA8 ASN B 19 GLY B 29 1 11 HELIX 9 AA9 ASN B 31 GLU B 46 1 16 HELIX 10 AB1 THR B 53 GLU B 59 1 7 HELIX 11 AB2 SER B 64 GLY B 79 1 16 HELIX 12 AB3 LEU B 99 ASN B 115 1 17 HELIX 13 AB4 LYS C 2 GLY C 13 1 12 HELIX 14 AB5 ASN C 19 GLY C 29 1 11 HELIX 15 AB6 ASN C 31 GLU C 46 1 16 HELIX 16 AB7 THR C 53 GLU C 59 1 7 HELIX 17 AB8 SER C 64 GLY C 79 1 16 HELIX 18 AB9 LEU C 99 ASN C 115 1 17 HELIX 19 AC1 LYS D 2 GLY D 13 1 12 HELIX 20 AC2 ASN D 19 GLY D 29 1 11 HELIX 21 AC3 ASN D 31 GLU D 46 1 16 HELIX 22 AC4 THR D 53 GLU D 59 1 7 HELIX 23 AC5 SER D 64 GLY D 79 1 16 HELIX 24 AC6 LEU D 99 ASN D 115 1 17 SHEET 1 AA1 2 THR A 14 PRO A 18 0 SHEET 2 AA1 2 THR B 14 PRO B 18 -1 O SER B 15 N ILE A 17 SHEET 1 AA2 2 PHE A 82 GLU A 87 0 SHEET 2 AA2 2 LYS A 93 SER A 98 -1 O LYS A 96 N GLU A 84 SHEET 1 AA3 2 PHE B 82 GLU B 87 0 SHEET 2 AA3 2 LYS B 93 SER B 98 -1 O LYS B 96 N GLU B 84 SHEET 1 AA4 2 THR C 14 PRO C 18 0 SHEET 2 AA4 2 THR D 14 PRO D 18 -1 O SER D 15 N ILE C 17 SHEET 1 AA5 2 PHE C 82 GLU C 87 0 SHEET 2 AA5 2 LYS C 93 SER C 98 -1 O LYS C 96 N GLU C 84 SHEET 1 AA6 2 PHE D 82 GLU D 87 0 SHEET 2 AA6 2 LYS D 93 SER D 98 -1 O LYS D 96 N GLU D 84 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000