HEADER MEMBRANE PROTEIN 27-MAR-23 8OK4 TITLE VARIANT SURFACE GLYCOPROTEIN VSG11WT-OIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: VARIANT SURFACE GLYCOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 3 ORGANISM_TAXID: 5702; SOURCE 4 GENE: TB427.BES126.15; SOURCE 5 EXPRESSION_SYSTEM: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 5702 KEYWDS VARIANT SURFACE GLYCOPROTEIN SURAMIN TRYPANOSOMIASIS DRUG RESISTANCE KEYWDS 2 GLYCOSYLATION, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.P.ZEELEN,C.E.STEBBINS,F.ARESTA-BRANCO,K.FOTI REVDAT 1 13-SEP-23 8OK4 0 JRNL AUTH S.DAKOVIC,J.P.ZEELEN,A.GKEKA,M.CHANDRA,M.VAN STRAATEN, JRNL AUTH 2 K.FOTI,J.ZHONG,E.P.VLACHOU,F.ARESTA-BRANCO,J.P.VERDI, JRNL AUTH 3 F.N.PAPAVASILIOU,C.E.STEBBINS JRNL TITL A STRUCTURAL CLASSIFICATION OF THE VARIANT SURFACE JRNL TITL 2 GLYCOPROTEINS OF THE AFRICAN TRYPANOSOMEY. JRNL REF PLOS NEGL TROP DIS V. 17 11621 2023 JRNL REFN ESSN 1935-2735 JRNL PMID 37656766 JRNL DOI 10.1371/JOURNAL.PNTD.0011621 REMARK 2 REMARK 2 RESOLUTION. 1.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2-4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 99764 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.9400 - 3.8200 1.00 3395 179 0.1775 0.1839 REMARK 3 2 3.8200 - 3.0300 1.00 3255 172 0.1477 0.1722 REMARK 3 3 3.0300 - 2.6500 1.00 3235 170 0.1589 0.1973 REMARK 3 4 2.6500 - 2.4100 1.00 3201 168 0.1487 0.1569 REMARK 3 5 2.4100 - 2.2300 1.00 3194 169 0.1388 0.1547 REMARK 3 6 2.2300 - 2.1000 1.00 3182 167 0.1301 0.1467 REMARK 3 7 2.1000 - 2.0000 1.00 3172 167 0.1395 0.1535 REMARK 3 8 2.0000 - 1.9100 1.00 3177 167 0.1386 0.1717 REMARK 3 9 1.9100 - 1.8400 1.00 3168 167 0.1353 0.1694 REMARK 3 10 1.8400 - 1.7700 1.00 3162 166 0.1372 0.1764 REMARK 3 11 1.7700 - 1.7200 1.00 3170 167 0.1443 0.1919 REMARK 3 12 1.7200 - 1.6700 1.00 3145 166 0.1489 0.2012 REMARK 3 13 1.6700 - 1.6200 1.00 3102 163 0.1515 0.1693 REMARK 3 14 1.6200 - 1.5900 1.00 3203 169 0.1542 0.1894 REMARK 3 15 1.5900 - 1.5500 1.00 3115 164 0.1568 0.1988 REMARK 3 16 1.5500 - 1.5200 1.00 3153 166 0.1596 0.1970 REMARK 3 17 1.5200 - 1.4900 1.00 3131 163 0.1622 0.2195 REMARK 3 18 1.4900 - 1.4600 1.00 3130 165 0.1616 0.2215 REMARK 3 19 1.4600 - 1.4300 1.00 3176 168 0.1805 0.2160 REMARK 3 20 1.4300 - 1.4100 1.00 3081 162 0.1890 0.2546 REMARK 3 21 1.4100 - 1.3800 1.00 3138 165 0.2025 0.2219 REMARK 3 22 1.3800 - 1.3600 1.00 3151 165 0.2165 0.2734 REMARK 3 23 1.3600 - 1.3400 1.00 3140 165 0.2437 0.2898 REMARK 3 24 1.3400 - 1.3200 1.00 3123 164 0.2496 0.3650 REMARK 3 25 1.3200 - 1.3100 1.00 3094 163 0.2450 0.2906 REMARK 3 26 1.3100 - 1.2900 1.00 3152 166 0.2406 0.2925 REMARK 3 27 1.2900 - 1.2700 1.00 3111 163 0.2482 0.2384 REMARK 3 28 1.2700 - 1.2600 1.00 3116 163 0.2626 0.3152 REMARK 3 29 1.2600 - 1.2400 1.00 3120 164 0.2803 0.2909 REMARK 3 30 1.2400 - 1.2300 0.99 3088 161 0.2778 0.3358 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8OK4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292124822. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99764 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.230 REMARK 200 RESOLUTION RANGE LOW (A) : 40.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.27 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.77700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M NAKTARTRATE, 100 MM TRIS/HCL, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -37.43100 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 64.83239 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -74.86200 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 695 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 872 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 977 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 990 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 999 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1000 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1011 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1012 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 389 REMARK 465 ALA A 390 REMARK 465 SER A 391 REMARK 465 VAL A 392 REMARK 465 GLY A 393 REMARK 465 THR A 394 REMARK 465 ARG A 395 REMARK 465 HIS A 396 REMARK 465 LEU A 397 REMARK 465 GLU A 398 REMARK 465 THR A 399 REMARK 465 THR A 400 REMARK 465 LYS A 401 REMARK 465 GLN A 402 REMARK 465 ARG A 403 REMARK 465 VAL A 404 REMARK 465 SER A 405 REMARK 465 ASN A 406 REMARK 465 GLU A 407 REMARK 465 GLN A 408 REMARK 465 GLY A 409 REMARK 465 LYS A 410 REMARK 465 THR A 411 REMARK 465 GLN A 412 REMARK 465 GLN A 413 REMARK 465 THR A 414 REMARK 465 GLN A 415 REMARK 465 GLN A 416 REMARK 465 THR A 417 REMARK 465 CYS A 418 REMARK 465 GLU A 419 REMARK 465 GLN A 420 REMARK 465 TYR A 421 REMARK 465 ASN A 422 REMARK 465 ASN A 423 REMARK 465 LYS A 424 REMARK 465 LYS A 425 REMARK 465 ASN A 426 REMARK 465 ASP A 427 REMARK 465 CYS A 428 REMARK 465 VAL A 429 REMARK 465 LYS A 430 REMARK 465 THR A 431 REMARK 465 GLY A 432 REMARK 465 VAL A 433 REMARK 465 CYS A 434 REMARK 465 LYS A 435 REMARK 465 TRP A 436 REMARK 465 GLU A 437 REMARK 465 GLU A 438 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 142 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 170 CG CD1 CD2 REMARK 470 LYS A 282 CG CD CE NZ REMARK 470 LYS A 369 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 192 -174.61 -69.67 REMARK 500 THR A 207 -65.96 79.73 REMARK 500 ASP A 242 -96.37 -146.93 REMARK 500 THR A 316 -62.93 72.45 REMARK 500 CYS A 318 55.65 -94.66 REMARK 500 SER A 324 -77.52 -108.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1011 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A1012 DISTANCE = 6.92 ANGSTROMS DBREF 8OK4 A 24 438 UNP B3GVS7 B3GVS7_TRYBB 24 438 SEQRES 1 A 415 ASN ILE GLY THR GLY ASP ASN VAL LEU HIS ARG ALA ALA SEQRES 2 A 415 LEU CYS GLY ILE ILE GLU LEU ALA GLY LYS ARG ALA LYS SEQRES 3 A 415 LEU GLU THR ALA LEU PRO ASN PHE GLN ASN GLU LEU ASN SEQRES 4 A 415 SER ILE LEU GLU LEU ASN MET THR ALA ALA GLU PRO THR SEQRES 5 A 415 TRP LEU ASP GLN PHE ARG ASP LYS ASP ASP ARG SER LYS SEQRES 6 A 415 PRO ARG ASP LEU THR LYS GLN PRO LEU PRO LYS ASP THR SEQRES 7 A 415 ASN TRP ALA ASP HIS TRP THR ALA TRP ALA LYS ALA ALA SEQRES 8 A 415 LEU PRO LEU LEU ASN ASP GLU THR HIS GLN ALA LYS LEU SEQRES 9 A 415 LYS GLU TYR LYS LEU ALA GLY LEU GLN PRO GLU LYS LEU SEQRES 10 A 415 GLU ARG ALA ARG ASN THR ILE ARG ARG LEU THR ALA GLU SEQRES 11 A 415 ALA VAL ALA LYS ALA GLN ASP PRO THR VAL ALA GLU SER SEQRES 12 A 415 THR ALA ASP LEU THR THR GLU GLU ASP LEU GLN LYS GLN SEQRES 13 A 415 ILE ASN GLN ALA VAL TYR SER LYS ASP THR GLU PRO ASP SEQRES 14 A 415 ASP ASP PHE ASN GLY TYR THR ALA PHE GLU GLY LYS ALA SEQRES 15 A 415 SER THR ASN ARG GLN THR ILE CYS GLY SER ALA VAL ALA SEQRES 16 A 415 GLY SER LYS ALA THR ASN ALA MET ASP ALA LEU PHE CYS SEQRES 17 A 415 VAL CYS ALA ASP ASP ARG THR ASN GLY ALA ASP ALA GLY SEQRES 18 A 415 LYS ALA CYS VAL ALA GLY THR ALA PRO GLY THR GLY TRP SEQRES 19 A 415 ASN PRO GLY VAL THR ALA THR PRO THR GLY THR MET LEU SEQRES 20 A 415 GLN LYS VAL ARG LYS LEU CYS ASN THR HIS GLY LYS THR SEQRES 21 A 415 THR LEU SER ALA ALA ALA ILE GLU GLY ARG LEU THR ALA SEQRES 22 A 415 VAL GLY ASN LEU LEU THR ARG GLY SER ALA THR SER ILE SEQRES 23 A 415 LEU GLY SER PHE LEU ALA THR ASP CYS SER GLY ASP GLN SEQRES 24 A 415 GLY SER GLY MET CYS VAL ALA TYR THR GLU VAL THR ASP SEQRES 25 A 415 ALA LYS GLY THR PRO THR LYS ASP ILE PRO TRP MET GLN SEQRES 26 A 415 LYS LEU ASP SER VAL ARG ILE LYS LEU GLN LYS HIS GLU SEQRES 27 A 415 ARG ALA VAL GLU LYS LEU GLY LYS PRO GLN HIS ASP LEU SEQRES 28 A 415 LYS THR ILE LEU THR LEU ALA LYS ASP PRO ALA TYR LEU SEQRES 29 A 415 GLN LEU ALA SER VAL GLY THR ARG HIS LEU GLU THR THR SEQRES 30 A 415 LYS GLN ARG VAL SER ASN GLU GLN GLY LYS THR GLN GLN SEQRES 31 A 415 THR GLN GLN THR CYS GLU GLN TYR ASN ASN LYS LYS ASN SEQRES 32 A 415 ASP CYS VAL LYS THR GLY VAL CYS LYS TRP GLU GLU HET NAG B 1 26 HET NAG B 2 26 HET BMA B 3 19 HET MAN B 4 20 HET MAN B 5 21 HET MAN B 6 21 HET GLC A 501 21 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN 3(C6 H12 O6) FORMUL 3 GLC C6 H12 O6 FORMUL 4 HOH *412(H2 O) HELIX 1 AA1 ASN A 30 GLU A 42 1 13 HELIX 2 AA2 PHE A 57 ALA A 72 1 16 HELIX 3 AA3 GLU A 73 ASP A 78 1 6 HELIX 4 AA4 GLN A 79 ARG A 81 5 3 HELIX 5 AA5 ASN A 102 ASP A 105 5 4 HELIX 6 AA6 HIS A 106 LEU A 115 1 10 HELIX 7 AA7 PRO A 116 LEU A 118 5 3 HELIX 8 AA8 ASN A 119 TYR A 130 1 12 HELIX 9 AA9 GLN A 136 ALA A 158 1 23 HELIX 10 AB1 SER A 166 THR A 171 1 6 HELIX 11 AB2 THR A 172 SER A 186 1 15 HELIX 12 AB3 THR A 199 LYS A 204 5 6 HELIX 13 AB4 ASN A 208 GLY A 214 1 7 HELIX 14 AB5 ASN A 224 ALA A 234 1 11 HELIX 15 AB6 ASP A 242 ALA A 246 5 5 HELIX 16 AB7 THR A 266 LYS A 275 1 10 HELIX 17 AB8 SER A 286 LEU A 301 1 16 HELIX 18 AB9 THR A 339 ILE A 344 1 6 HELIX 19 AC1 ILE A 344 LYS A 382 1 39 HELIX 20 AC2 ASP A 383 GLN A 388 1 6 SHEET 1 AA1 2 ALA A 48 LEU A 50 0 SHEET 2 AA1 2 THR A 283 LEU A 285 1 O LEU A 285 N LYS A 49 SHEET 1 AA2 3 THR A 302 ARG A 303 0 SHEET 2 AA2 3 SER A 308 PHE A 313 -1 O ILE A 309 N THR A 302 SHEET 3 AA2 3 GLY A 325 TYR A 330 -1 O VAL A 328 N LEU A 310 SSBOND 1 CYS A 38 CYS A 277 1555 1555 2.04 SSBOND 2 CYS A 213 CYS A 231 1555 1555 2.07 SSBOND 3 CYS A 233 CYS A 247 1555 1555 2.03 SSBOND 4 CYS A 318 CYS A 327 1555 1555 2.07 LINK ND2 ASN A 68 C1 NAG B 1 1555 1555 1.44 LINK OG SER A 324 C1 GLC A 501 1555 1555 1.38 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.42 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.42 LINK O3 BMA B 3 C1 MAN B 4 1555 1555 1.45 LINK O6 BMA B 3 C1 MAN B 6 1555 1555 1.44 LINK O2 MAN B 4 C1 MAN B 5 1555 1555 1.43 CRYST1 74.862 74.862 105.611 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013358 0.007712 0.000000 0.00000 SCALE2 0.000000 0.015424 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009469 0.00000