HEADER RNA BINDING PROTEIN 27-MAR-23 8OK9 TITLE HETERODIMERIC COMPLEX OF ARCHAEOGLOBUS FULGIDUS ARGONAUTE PROTEIN TITLE 2 AF1318 (AFAGO) WITH DNA AND AFAGO-N PROTEIN CONTAINING N-L1-L2 TITLE 3 DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PIWI PROTEIN AF_1318; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ARHAEOGLOBUS FULGIDUS ARGONAUTE PROTEIN; COMPND 5 SYNONYM: AFAGO,AFPIWI,PIWI/MID DOMAIN PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ARCHAEOGLOBUS FULGIDUS AFAGO-N PROTEIN; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(P*AP*TP*CP*GP*AP*CP*CP*AP*GP*GP*CP*TP*AP*CP*G)- COMPND 15 3'); COMPND 16 CHAIN: R, S; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS DSM 4304; SOURCE 3 ORGANISM_TAXID: 224325; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 GENE: AF_1318; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS DSM 4304; SOURCE 12 ORGANISM_TAXID: 224325; SOURCE 13 STRAIN: DSM 8774; SOURCE 14 GENE: AFULGI_00014290; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PBAD; SOURCE 19 MOL_ID: 3; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 22 ORGANISM_TAXID: 562 KEYWDS PROTEIN-NUCLEIC ACID INTERACTIONS, ARGONAUTE, PAGO, GUIDE AND TARGET KEYWDS 2 SPECIFICITY, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.N.MANAKOVA,M.ZAREMBA REVDAT 2 27-MAR-24 8OK9 1 JRNL REVDAT 1 24-JAN-24 8OK9 0 JRNL AUTH E.MANAKOVA,E.GOLOVINAS,R.POCEVICIUTE,G.SASNAUSKAS, JRNL AUTH 2 A.SILANSKAS,D.RUTKAUSKAS,M.JANKUNEC,E.ZAGORSKAITE, JRNL AUTH 3 E.JURGELAITIS,A.GRYBAUSKAS,C.VENCLOVAS,M.ZAREMBA JRNL TITL THE MISSING PART: THE ARCHAEOGLOBUS FULGIDUS ARGONAUTE FORMS JRNL TITL 2 A FUNCTIONAL HETERODIMER WITH AN N-L1-L2 DOMAIN PROTEIN. JRNL REF NUCLEIC ACIDS RES. V. 52 2530 2024 JRNL REFN ESSN 1362-4962 JRNL PMID 38197228 JRNL DOI 10.1093/NAR/GKAD1241 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 41834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.080 REMARK 3 FREE R VALUE TEST SET COUNT : 4216 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 64.6900 - 7.7600 0.99 2512 268 0.1693 0.1820 REMARK 3 2 7.7600 - 6.1600 1.00 2499 284 0.1888 0.2030 REMARK 3 3 6.1600 - 5.3900 1.00 2505 277 0.1969 0.2178 REMARK 3 4 5.3900 - 4.8900 1.00 2523 271 0.1686 0.1796 REMARK 3 5 4.8900 - 4.5400 1.00 2450 326 0.1517 0.1681 REMARK 3 6 4.5400 - 4.2700 1.00 2499 287 0.1479 0.1792 REMARK 3 7 4.2700 - 4.0600 1.00 2471 306 0.1631 0.1857 REMARK 3 8 4.0600 - 3.8800 1.00 2517 285 0.1775 0.1780 REMARK 3 9 3.8800 - 3.7300 1.00 2538 253 0.1859 0.2245 REMARK 3 10 3.7300 - 3.6100 1.00 2502 294 0.2021 0.2492 REMARK 3 11 3.6100 - 3.4900 1.00 2569 249 0.2007 0.2523 REMARK 3 12 3.4900 - 3.3900 1.00 2460 313 0.2143 0.2574 REMARK 3 13 3.3900 - 3.3000 1.00 2501 260 0.2214 0.2620 REMARK 3 14 3.3000 - 3.2200 1.00 2555 261 0.2243 0.2488 REMARK 3 15 3.2200 - 3.1500 1.00 2516 265 0.2359 0.3099 REMARK 3 16 3.1500 - 3.0800 1.00 2508 290 0.2377 0.2973 REMARK 3 17 3.0800 - 3.0200 1.00 2490 284 0.2542 0.2788 REMARK 3 18 3.0200 - 2.9600 1.00 2556 257 0.2349 0.2822 REMARK 3 19 2.9600 - 2.9100 1.00 2451 301 0.2451 0.2752 REMARK 3 20 2.9100 - 2.8600 1.00 2535 269 0.2401 0.2904 REMARK 3 21 2.8600 - 2.8200 1.00 2515 252 0.2452 0.2963 REMARK 3 22 2.8200 - 2.7700 1.00 2506 293 0.2466 0.2687 REMARK 3 23 2.7700 - 2.7300 1.00 2467 291 0.2455 0.3007 REMARK 3 24 2.7300 - 2.6900 1.00 2548 281 0.2511 0.3017 REMARK 3 25 2.6900 - 2.6600 1.00 2521 275 0.2486 0.2804 REMARK 3 26 2.6600 - 2.6200 1.00 2508 260 0.2667 0.3098 REMARK 3 27 2.6200 - 2.5900 1.00 2462 328 0.2626 0.3301 REMARK 3 28 2.5900 - 2.5600 1.00 2517 273 0.2664 0.2984 REMARK 3 29 2.5600 - 2.5300 1.00 2511 289 0.2734 0.3299 REMARK 3 30 2.5300 - 2.5000 1.00 2524 290 0.2746 0.2678 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : 57.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6185 REMARK 3 ANGLE : 0.876 8458 REMARK 3 CHIRALITY : 0.059 924 REMARK 3 PLANARITY : 0.005 994 REMARK 3 DIHEDRAL : 21.646 2338 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8OK9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292129394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.01000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JUN 17, 2015 REMARK 200 DATA SCALING SOFTWARE : AIMLESS VERSION 0.7.2 : 27/05/18 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44100 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 144.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : 0.41300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP VERSION 6.1 : 23/01/06 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BISTRIS PH 5.5 0.1 M;AMMONIUM ACETATE REMARK 280 0.1 M; PEG10K 8%; CRYO-COOLING WITH ADDITION OF ETHYLENE GLYCOL REMARK 280 TO 30 %, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 280K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.85700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.17350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.94650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.17350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.85700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.94650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, R, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 MET C -13 REMARK 465 GLY C -12 REMARK 465 SER C -11 REMARK 465 SER C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 GLU C 2 REMARK 465 ILE C 3 REMARK 465 PRO C 4 REMARK 465 LEU C 5 REMARK 465 SER C 6 REMARK 465 SER C 7 REMARK 465 GLY C 8 REMARK 465 ASN C 9 REMARK 465 VAL C 10 REMARK 465 ASN C 11 REMARK 465 THR C 12 REMARK 465 PRO C 13 REMARK 465 ASP C 14 REMARK 465 VAL C 15 REMARK 465 ARG C 16 REMARK 465 SER C 17 REMARK 465 ASN C 246 REMARK 465 ASN C 247 REMARK 465 ASP C 248 REMARK 465 GLY C 249 REMARK 465 ILE C 250 REMARK 465 DG R 9 REMARK 465 DG R 10 REMARK 465 DC R 11 REMARK 465 DT R 12 REMARK 465 DA R 13 REMARK 465 DC R 14 REMARK 465 DG R 15 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA R 1 P DA R 1 OP3 -0.127 REMARK 500 DA S 1 P DA S 1 OP3 -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 2 28.17 46.84 REMARK 500 SER A 133 -56.38 -131.32 REMARK 500 ASP A 191 -169.03 -115.36 REMARK 500 ASN A 386 49.70 -78.68 REMARK 500 ASN C 24 49.97 -82.05 REMARK 500 GLU C 67 -71.31 -128.12 REMARK 500 GLN C 139 -132.92 54.18 REMARK 500 ASN C 159 29.77 44.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 159 OE1 REMARK 620 2 LEU A 427 O 80.1 REMARK 620 3 LEU A 427 OXT 81.7 53.8 REMARK 620 4 DA R 1 OP3 87.2 166.9 121.1 REMARK 620 5 DA R 1 OP1 130.2 128.6 86.8 58.5 REMARK 620 6 DC R 3 OP1 86.6 88.9 142.2 93.8 126.8 REMARK 620 N 1 2 3 4 5 DBREF 8OK9 A 1 427 UNP O28951 PIWI_ARCFU 1 427 DBREF1 8OK9 C 1 250 UNP A0A075WKW4_ARCFL DBREF2 8OK9 C A0A075WKW4 1 250 DBREF 8OK9 R 1 15 PDB 8OK9 8OK9 1 15 DBREF 8OK9 S 1 15 PDB 8OK9 8OK9 1 15 SEQADV 8OK9 MET A -13 UNP O28951 INITIATING METHIONINE SEQADV 8OK9 GLY A -12 UNP O28951 EXPRESSION TAG SEQADV 8OK9 SER A -11 UNP O28951 EXPRESSION TAG SEQADV 8OK9 SER A -10 UNP O28951 EXPRESSION TAG SEQADV 8OK9 HIS A -9 UNP O28951 EXPRESSION TAG SEQADV 8OK9 HIS A -8 UNP O28951 EXPRESSION TAG SEQADV 8OK9 HIS A -7 UNP O28951 EXPRESSION TAG SEQADV 8OK9 HIS A -6 UNP O28951 EXPRESSION TAG SEQADV 8OK9 HIS A -5 UNP O28951 EXPRESSION TAG SEQADV 8OK9 HIS A -4 UNP O28951 EXPRESSION TAG SEQADV 8OK9 SER A -3 UNP O28951 EXPRESSION TAG SEQADV 8OK9 GLN A -2 UNP O28951 EXPRESSION TAG SEQADV 8OK9 ASP A -1 UNP O28951 EXPRESSION TAG SEQADV 8OK9 PRO A 0 UNP O28951 EXPRESSION TAG SEQADV 8OK9 MET C -13 UNP A0A075WKW INITIATING METHIONINE SEQADV 8OK9 GLY C -12 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 SER C -11 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 SER C -10 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 HIS C -9 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 HIS C -8 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 HIS C -7 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 HIS C -6 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 HIS C -5 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 HIS C -4 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 SER C -3 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 GLN C -2 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 ASP C -1 UNP A0A075WKW EXPRESSION TAG SEQADV 8OK9 PRO C 0 UNP A0A075WKW EXPRESSION TAG SEQRES 1 A 441 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 441 PRO MET MET GLU TYR LYS ILE VAL GLU ASN GLY LEU THR SEQRES 3 A 441 TYR ARG ILE GLY ASN GLY ALA SER VAL PRO ILE SER ASN SEQRES 4 A 441 THR GLY GLU LEU ILE LYS GLY LEU ARG ASN TYR GLY PRO SEQRES 5 A 441 TYR GLU VAL PRO SER LEU LYS TYR ASN GLN ILE ALA LEU SEQRES 6 A 441 ILE HIS ASN ASN GLN PHE SER SER LEU ILE ASN GLN LEU SEQRES 7 A 441 LYS SER GLN ILE SER SER LYS ILE ASP GLU VAL TRP HIS SEQRES 8 A 441 ILE HIS ASN ILE ASN ILE SER GLU PHE ILE TYR ASP SER SEQRES 9 A 441 PRO HIS PHE ASP SER ILE LYS SER GLN VAL ASP ASN ALA SEQRES 10 A 441 ILE ASP THR GLY VAL ASP GLY ILE MET LEU VAL LEU PRO SEQRES 11 A 441 GLU TYR ASN THR PRO LEU TYR TYR LYS LEU LYS SER TYR SEQRES 12 A 441 LEU ILE ASN SER ILE PRO SER GLN PHE MET ARG TYR ASP SEQRES 13 A 441 ILE LEU SER ASN ARG ASN LEU THR PHE TYR VAL ASP ASN SEQRES 14 A 441 LEU LEU VAL GLN PHE VAL SER LYS LEU GLY GLY LYS PRO SEQRES 15 A 441 TRP ILE LEU ASN VAL ASP PRO GLU LYS GLY SER ASP ILE SEQRES 16 A 441 ILE ILE GLY THR GLY ALA THR ARG ILE ASP ASN VAL ASN SEQRES 17 A 441 LEU PHE CYS PHE ALA MET VAL PHE LYS LYS ASP GLY THR SEQRES 18 A 441 MET LEU TRP ASN GLU ILE SER PRO ILE VAL THR SER SER SEQRES 19 A 441 GLU TYR LEU THR TYR LEU LYS SER THR ILE LYS LYS VAL SEQRES 20 A 441 VAL TYR GLY PHE LYS LYS SER ASN PRO ASP TRP ASP VAL SEQRES 21 A 441 GLU LYS LEU THR LEU HIS VAL SER GLY LYS ARG PRO LYS SEQRES 22 A 441 MET LYS ASP GLY GLU THR LYS ILE LEU LYS GLU THR VAL SEQRES 23 A 441 GLU GLU LEU LYS LYS GLN GLU MET VAL SER ARG ASP VAL SEQRES 24 A 441 LYS TYR ALA ILE LEU HIS LEU ASN GLU THR HIS PRO PHE SEQRES 25 A 441 TRP VAL MET GLY ASP PRO ASN ASN ARG PHE HIS PRO TYR SEQRES 26 A 441 GLU GLY THR LYS VAL LYS LEU SER SER LYS ARG TYR LEU SEQRES 27 A 441 LEU THR LEU LEU GLN PRO TYR LEU LYS ARG ASN GLY LEU SEQRES 28 A 441 GLU MET VAL THR PRO ILE LYS PRO LEU SER VAL GLU ILE SEQRES 29 A 441 VAL SER ASP ASN TRP THR SER GLU GLU TYR TYR HIS ASN SEQRES 30 A 441 VAL HIS GLU ILE LEU ASP GLU ILE TYR TYR LEU SER LYS SEQRES 31 A 441 MET ASN TRP ARG GLY PHE ARG SER ARG ASN LEU PRO VAL SEQRES 32 A 441 THR VAL ASN TYR PRO LYS LEU VAL ALA GLY ILE ILE ALA SEQRES 33 A 441 ASN VAL ASN ARG TYR GLY GLY TYR PRO ILE ASN PRO GLU SEQRES 34 A 441 GLY ASN ARG SER LEU GLN THR ASN PRO TRP PHE LEU SEQRES 1 C 264 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 C 264 PRO MET GLU ILE PRO LEU SER SER GLY ASN VAL ASN THR SEQRES 3 C 264 PRO ASP VAL ARG SER SER GLY ILE LEU TYR ILE ASN ILE SEQRES 4 C 264 TYR PRO ILE VAL ASN TYR PRO GLU THR ILE LYS VAL SER SEQRES 5 C 264 ALA ILE PRO TYR TYR GLU GLU PHE LEU PRO GLY LYS TRP SEQRES 6 C 264 LYS LYS ARG ILE GLY ASP LEU ILE TYR LEU TYR GLY TYR SEQRES 7 C 264 GLY ILE GLU ASN GLU PHE ASP GLU ILE ASP ASN SER ASN SEQRES 8 C 264 ALA LEU PHE GLY LYS ILE PHE ARG LYS TYR LEU LEU ASP SEQRES 9 C 264 ILE LEU SER GLU ASN ILE ALA THR PRO TRP GLN LEU LYS SEQRES 10 C 264 GLU LEU GLY SER THR LEU ARG LEU VAL LYS GLU ILE THR SEQRES 11 C 264 GLU ASN TYR GLU PHE SER ASN ILE ILE LYS LEU GLN TYR SEQRES 12 C 264 GLU LEU ILE ILE ASN VAL HIS HIS TRP GLN ASN THR ASN SEQRES 13 C 264 PHE GLY ILE ILE VAL ASP LEU LYS ILE ASN ILE LEU ASP SEQRES 14 C 264 ARG GLU ASN ASN GLN ARG ILE SER TYR THR LYS ILE LYS SEQRES 15 C 264 ASP LYS TYR GLY GLU SER VAL LYS LYS LYS ILE TRP VAL SEQRES 16 C 264 SER VAL GLN ALA PHE HIS ARG HIS LEU THR PRO GLU GLY SEQRES 17 C 264 LYS LYS TYR ALA THR ALA MET ARG ASP LYS PHE ASN LEU SEQRES 18 C 264 LEU THR GLY LEU LEU LYS GLU ALA PHE GLY SER SER GLU SEQRES 19 C 264 ASP GLU LYS THR PHE SER THR PRO ASP GLY GLU ILE LYS SEQRES 20 C 264 ILE VAL PHE LYS PRO LEU GLU ILE VAL GLU VAL SER ASN SEQRES 21 C 264 ASN ASP GLY ILE SEQRES 1 R 15 DA DT DC DG DA DC DC DA DG DG DC DT DA SEQRES 2 R 15 DC DG SEQRES 1 S 15 DA DT DC DG DA DC DC DA DG DG DC DT DA SEQRES 2 S 15 DC DG HET MG A 501 1 HET ACY A 502 4 HET ACY A 503 4 HET ACY A 504 4 HET ACY A 505 4 HET ACY A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET ACY C 301 4 HET ACY C 302 4 HET EDO C 303 4 HET PEG C 304 7 HET ACY S 101 4 HET EDO S 102 4 HET EDO S 103 4 HETNAM MG MAGNESIUM ION HETNAM ACY ACETIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 5 MG MG 2+ FORMUL 6 ACY 8(C2 H4 O2) FORMUL 11 EDO 6(C2 H6 O2) FORMUL 17 PEG C4 H10 O3 FORMUL 21 HOH *200(H2 O) HELIX 1 AA1 ASN A 25 GLY A 37 1 13 HELIX 2 AA2 SER A 58 VAL A 75 1 18 HELIX 3 AA3 HIS A 92 GLY A 107 1 16 HELIX 4 AA4 ASN A 119 ASN A 132 1 14 HELIX 5 AA5 ILE A 143 ARG A 147 5 5 HELIX 6 AA6 ASN A 148 LEU A 164 1 17 HELIX 7 AA7 GLU A 221 ASN A 241 1 21 HELIX 8 AA8 MET A 260 GLN A 278 1 19 HELIX 9 AA9 ASP A 303 ARG A 307 5 5 HELIX 10 AB1 GLU A 359 SER A 375 1 17 HELIX 11 AB2 PRO A 388 GLY A 408 1 21 HELIX 12 AB3 ASN A 417 ASN A 423 1 7 HELIX 13 AB4 TYR C 64 ILE C 66 5 3 HELIX 14 AB5 ASN C 77 GLU C 94 1 18 HELIX 15 AB6 SER C 163 GLY C 172 1 10 HELIX 16 AB7 GLY C 172 HIS C 187 1 16 HELIX 17 AB8 THR C 199 PHE C 216 1 18 SHEET 1 AA1 3 MET A 208 ILE A 213 0 SHEET 2 AA1 3 ASN A 194 PHE A 202 -1 N VAL A 201 O TRP A 210 SHEET 3 AA1 3 VAL A 217 THR A 218 -1 O VAL A 217 N LEU A 195 SHEET 1 AA212 MET A 208 ILE A 213 0 SHEET 2 AA212 ASN A 194 PHE A 202 -1 N VAL A 201 O TRP A 210 SHEET 3 AA212 ILE A 181 ARG A 189 -1 N GLY A 184 O MET A 200 SHEET 4 AA212 LYS A 248 SER A 254 1 O THR A 250 N ILE A 183 SHEET 5 AA212 LYS A 286 ASN A 293 1 O LEU A 290 N VAL A 253 SHEET 6 AA212 LEU A 346 ASP A 353 -1 O VAL A 351 N ILE A 289 SHEET 7 AA212 ARG A 322 LEU A 325 -1 N TYR A 323 O VAL A 348 SHEET 8 AA212 THR A 314 SER A 319 -1 N VAL A 316 O LEU A 324 SHEET 9 AA212 GLU A 3 ILE A 6 -1 N LYS A 5 O LYS A 315 SHEET 10 AA212 LEU C 239 GLU C 243 1 O VAL C 242 N TYR A 4 SHEET 11 AA212 LEU C 21 ILE C 23 -1 N LEU C 21 O ILE C 241 SHEET 12 AA212 VAL A 300 MET A 301 -1 N MET A 301 O TYR C 22 SHEET 1 AA3 2 THR A 12 ARG A 14 0 SHEET 2 AA3 2 ILE A 170 ASN A 172 -1 O ASN A 172 N THR A 12 SHEET 1 AA4 4 ASN A 82 ILE A 87 0 SHEET 2 AA4 4 GLN A 48 HIS A 53 1 N LEU A 51 O SER A 84 SHEET 3 AA4 4 GLY A 110 LEU A 115 1 O MET A 112 N ALA A 50 SHEET 4 AA4 4 SER A 136 ARG A 140 1 O MET A 139 N LEU A 115 SHEET 1 AA5 2 LEU A 332 LYS A 333 0 SHEET 2 AA5 2 GLY A 336 LEU A 337 -1 O GLY A 336 N LYS A 333 SHEET 1 AA6 4 HIS C -5 HIS C -4 0 SHEET 2 AA6 4 ILE C 25 TYR C 31 -1 O TYR C 31 N HIS C -5 SHEET 3 AA6 4 ASN C 142 ASP C 155 -1 O ILE C 145 N TYR C 26 SHEET 4 AA6 4 GLN C 160 ARG C 161 -1 O GLN C 160 N ASP C 155 SHEET 1 AA7 7 GLN C 101 LEU C 105 0 SHEET 2 AA7 7 LEU C 109 GLU C 114 -1 O ARG C 110 N LYS C 103 SHEET 3 AA7 7 ILE C 125 TRP C 138 -1 O ILE C 133 N LEU C 109 SHEET 4 AA7 7 ASN C 142 ASP C 155 -1 O LEU C 154 N LYS C 126 SHEET 5 AA7 7 ILE C 25 TYR C 31 -1 N TYR C 26 O ILE C 145 SHEET 6 AA7 7 GLU C 231 VAL C 235 -1 O VAL C 235 N PRO C 27 SHEET 7 AA7 7 GLU C 222 SER C 226 -1 N PHE C 225 O ILE C 232 SHEET 1 AA8 4 LYS C 52 ILE C 55 0 SHEET 2 AA8 4 LEU C 58 TYR C 62 -1 O LEU C 58 N ILE C 55 SHEET 3 AA8 4 THR C 34 PRO C 41 -1 N SER C 38 O LEU C 61 SHEET 4 AA8 4 ASP C 71 ASP C 74 -1 O ASP C 71 N VAL C 37 LINK OE1 GLN A 159 MG MG A 501 1555 1555 2.23 LINK O LEU A 427 MG MG A 501 1555 1555 2.18 LINK OXT LEU A 427 MG MG A 501 1555 1555 2.46 LINK MG MG A 501 OP3 DA R 1 1555 1555 2.20 LINK MG MG A 501 OP1 DA R 1 1555 1555 2.62 LINK MG MG A 501 OP1 DC R 3 1555 1555 2.18 CISPEP 1 THR C 98 PRO C 99 0 3.27 CRYST1 81.714 105.893 144.347 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012238 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009443 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006928 0.00000