data_8OL8 # _entry.id 8OL8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8OL8 pdb_00008ol8 10.2210/pdb8ol8/pdb WWPDB D_1292129231 ? ? BMRB 34801 ? 10.13018/BMR34801 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-07-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 8OL8 _pdbx_database_status.recvd_initial_deposition_date 2023-03-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR Structure of Lactamised Alpha-Synuclein 2-12 Peptide in 50% TFE.' _pdbx_database_related.db_id 34801 _pdbx_database_related.content_type unspecified # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 matt.crump@bristol.ac.uk Matthew Crump P 'principal investigator/group leader' 0000-0002-7868-5818 5 j.mason@bath.ac.uk Jody Mason M 'principal investigator/group leader' 0000-0002-4118-1958 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Allen, S.G.' 1 0000-0002-6928-588X 'Williams, C.' 2 0000-0001-5806-9842 'Meade, R.M.' 3 0000-0001-6074-7526 'Crump, M.P.' 4 0000-0002-7868-5818 'Mason, J.M.' 5 0000-0002-4118-1958 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The N-terminal domain of alpha-Synuclein modulates lipid induced aggregation via competitive inhibition' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Meade, R.M.' 1 0000-0001-6074-7526 primary 'Allen, S.G.' 2 0000-0002-6928-588X primary 'Williams, C.' 3 0000-0001-5806-9842 primary 'Tang, T.M.S.' 4 0000-0002-5149-4624 primary 'Crump, M.P.' 5 0000-0002-7868-5818 primary 'Mason, J.M.' 6 0000-0002-4118-1958 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ACE-ASP-VAL-PHE-MET-LYS-LYS-LEU-SER-LYS-ASP-LYS-NH2 _entity.formula_weight 1366.692 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)DVFMKKLSKDK(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XDVFMKKLSKDKX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 ASP n 1 3 VAL n 1 4 PHE n 1 5 MET n 1 6 LYS n 1 7 LYS n 1 8 LEU n 1 9 SER n 1 10 LYS n 1 11 ASP n 1 12 LYS n 1 13 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 13 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 ASP 2 1 1 ASP ASP A . n A 1 3 VAL 3 2 2 VAL VAL A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 MET 5 4 4 MET MET A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 SER 9 8 8 SER SER A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 ASP 11 10 10 ASP ASP A . n A 1 12 LYS 12 11 11 LYS LYS A . n A 1 13 NH2 13 12 12 NH2 NH2 A . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 2 2 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 3 3 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 4 4 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 5 5 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 6 6 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 7 7 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 8 8 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 9 9 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 10 10 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 11 11 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 12 12 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 13 13 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 14 14 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 15 15 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 16 16 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 17 17 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 18 18 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 19 19 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 20 20 Y 1 A ASP 10 ? OD2 ? A ASP 11 OD2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8OL8 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8OL8 _struct.title 'Solution NMR Structure of Lactamised Alpha-Synuclein 2-12 Peptide in 50% TFE.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8OL8 _struct_keywords.text 'inhibitor, LIPID BINDING PROTEIN, lactamised' _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8OL8 _struct_ref.pdbx_db_accession 8OL8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8OL8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8OL8 _struct_ref_seq.db_align_beg 0 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 12 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 210 ? 1 MORE -0 ? 1 'SSA (A^2)' 1320 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id VAL _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 3 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 12 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id VAL _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 2 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 11 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A ASP 2 N ? ? A ACE 0 A ASP 1 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale2 covale both ? A LYS 12 C ? ? ? 1_555 A NH2 13 N ? ? A LYS 11 A NH2 12 1_555 ? ? ? ? ? ? ? 1.322 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 2 2 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 3 3 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 4 4 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 5 5 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 6 6 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 7 7 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 8 8 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 9 9 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.32 10 10 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 11 11 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 12 12 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 13 13 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 14 14 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 15 15 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 16 16 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 17 17 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 18 18 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 19 19 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 20 20 NZ A LYS 6 ? ? CG A ASP 10 ? ? 1.33 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 20 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 2 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -67.89 _pdbx_validate_torsion.psi -179.39 # _pdbx_entry_details.entry_id 8OL8 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_nmr_ensemble.entry_id 8OL8 _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8OL8 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1 mM aSyn1-12, 20 mM potassium phosphate, 10 % v/v [U-99% 2H] D2O, 50 % v/v [U-100% 2H] 2,2,2-Trifluoroethanol, trifluoroethanol/water ; _pdbx_nmr_sample_details.solvent_system trifluoroethanol/water _pdbx_nmr_sample_details.label 'Sample 1' _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details 'Synthetic peptide dissolved in phosphate buffer (pH 6.5) with 10% D2O and with 50% TFE-d2' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 aSyn1-12 1 ? mM 'natural abundance' 1 'potassium phosphate' 20 ? mM 'natural abundance' 1 D2O 10 ? '% v/v' '[U-99% 2H]' 1 2,2,2-Trifluoroethanol 50 ? '% v/v' '[U-100% 2H]' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 20 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-13C HSQC' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-1H TOCSY' 1 isotropic 4 1 1 '2D 1H-15N HSQC' 1 isotropic 5 1 1 '2D 1H-1H COSY' 1 isotropic # _pdbx_nmr_refine.entry_id 8OL8 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CNS 1.21 'Brunger, Adams, Clore, Gros, Nilges and Read' 2 'structure calculation' ARIA 2.3.2 ;Linge, O'Donoghue and Nilges ; 3 'chemical shift assignment' 'CcpNmr Analysis' 2.4.2 CCPN 4 'peak picking' 'CcpNmr Analysis' 2.4.2 CCPN 5 'data analysis' DANGLE 1.1 'Cheung MS, Maguire ML, Stevens TJ, Broadhurst RW.' 6 collection TopSpin 3.6.1 'Bruker Biospin' 8 processing TopSpin 3.6.1 'Bruker Biospin' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ASP N N N N 8 ASP CA C N S 9 ASP C C N N 10 ASP O O N N 11 ASP CB C N N 12 ASP CG C N N 13 ASP OD1 O N N 14 ASP OD2 O N N 15 ASP OXT O N N 16 ASP H H N N 17 ASP H2 H N N 18 ASP HA H N N 19 ASP HB2 H N N 20 ASP HB3 H N N 21 ASP HD2 H N N 22 ASP HXT H N N 23 LEU N N N N 24 LEU CA C N S 25 LEU C C N N 26 LEU O O N N 27 LEU CB C N N 28 LEU CG C N N 29 LEU CD1 C N N 30 LEU CD2 C N N 31 LEU OXT O N N 32 LEU H H N N 33 LEU H2 H N N 34 LEU HA H N N 35 LEU HB2 H N N 36 LEU HB3 H N N 37 LEU HG H N N 38 LEU HD11 H N N 39 LEU HD12 H N N 40 LEU HD13 H N N 41 LEU HD21 H N N 42 LEU HD22 H N N 43 LEU HD23 H N N 44 LEU HXT H N N 45 LYS N N N N 46 LYS CA C N S 47 LYS C C N N 48 LYS O O N N 49 LYS CB C N N 50 LYS CG C N N 51 LYS CD C N N 52 LYS CE C N N 53 LYS NZ N N N 54 LYS OXT O N N 55 LYS H H N N 56 LYS H2 H N N 57 LYS HA H N N 58 LYS HB2 H N N 59 LYS HB3 H N N 60 LYS HG2 H N N 61 LYS HG3 H N N 62 LYS HD2 H N N 63 LYS HD3 H N N 64 LYS HE2 H N N 65 LYS HE3 H N N 66 LYS HZ1 H N N 67 LYS HZ2 H N N 68 LYS HZ3 H N N 69 LYS HXT H N N 70 MET N N N N 71 MET CA C N S 72 MET C C N N 73 MET O O N N 74 MET CB C N N 75 MET CG C N N 76 MET SD S N N 77 MET CE C N N 78 MET OXT O N N 79 MET H H N N 80 MET H2 H N N 81 MET HA H N N 82 MET HB2 H N N 83 MET HB3 H N N 84 MET HG2 H N N 85 MET HG3 H N N 86 MET HE1 H N N 87 MET HE2 H N N 88 MET HE3 H N N 89 MET HXT H N N 90 NH2 N N N N 91 NH2 HN1 H N N 92 NH2 HN2 H N N 93 PHE N N N N 94 PHE CA C N S 95 PHE C C N N 96 PHE O O N N 97 PHE CB C N N 98 PHE CG C Y N 99 PHE CD1 C Y N 100 PHE CD2 C Y N 101 PHE CE1 C Y N 102 PHE CE2 C Y N 103 PHE CZ C Y N 104 PHE OXT O N N 105 PHE H H N N 106 PHE H2 H N N 107 PHE HA H N N 108 PHE HB2 H N N 109 PHE HB3 H N N 110 PHE HD1 H N N 111 PHE HD2 H N N 112 PHE HE1 H N N 113 PHE HE2 H N N 114 PHE HZ H N N 115 PHE HXT H N N 116 SER N N N N 117 SER CA C N S 118 SER C C N N 119 SER O O N N 120 SER CB C N N 121 SER OG O N N 122 SER OXT O N N 123 SER H H N N 124 SER H2 H N N 125 SER HA H N N 126 SER HB2 H N N 127 SER HB3 H N N 128 SER HG H N N 129 SER HXT H N N 130 VAL N N N N 131 VAL CA C N S 132 VAL C C N N 133 VAL O O N N 134 VAL CB C N N 135 VAL CG1 C N N 136 VAL CG2 C N N 137 VAL OXT O N N 138 VAL H H N N 139 VAL H2 H N N 140 VAL HA H N N 141 VAL HB H N N 142 VAL HG11 H N N 143 VAL HG12 H N N 144 VAL HG13 H N N 145 VAL HG21 H N N 146 VAL HG22 H N N 147 VAL HG23 H N N 148 VAL HXT H N N 149 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ASP N CA sing N N 7 ASP N H sing N N 8 ASP N H2 sing N N 9 ASP CA C sing N N 10 ASP CA CB sing N N 11 ASP CA HA sing N N 12 ASP C O doub N N 13 ASP C OXT sing N N 14 ASP CB CG sing N N 15 ASP CB HB2 sing N N 16 ASP CB HB3 sing N N 17 ASP CG OD1 doub N N 18 ASP CG OD2 sing N N 19 ASP OD2 HD2 sing N N 20 ASP OXT HXT sing N N 21 LEU N CA sing N N 22 LEU N H sing N N 23 LEU N H2 sing N N 24 LEU CA C sing N N 25 LEU CA CB sing N N 26 LEU CA HA sing N N 27 LEU C O doub N N 28 LEU C OXT sing N N 29 LEU CB CG sing N N 30 LEU CB HB2 sing N N 31 LEU CB HB3 sing N N 32 LEU CG CD1 sing N N 33 LEU CG CD2 sing N N 34 LEU CG HG sing N N 35 LEU CD1 HD11 sing N N 36 LEU CD1 HD12 sing N N 37 LEU CD1 HD13 sing N N 38 LEU CD2 HD21 sing N N 39 LEU CD2 HD22 sing N N 40 LEU CD2 HD23 sing N N 41 LEU OXT HXT sing N N 42 LYS N CA sing N N 43 LYS N H sing N N 44 LYS N H2 sing N N 45 LYS CA C sing N N 46 LYS CA CB sing N N 47 LYS CA HA sing N N 48 LYS C O doub N N 49 LYS C OXT sing N N 50 LYS CB CG sing N N 51 LYS CB HB2 sing N N 52 LYS CB HB3 sing N N 53 LYS CG CD sing N N 54 LYS CG HG2 sing N N 55 LYS CG HG3 sing N N 56 LYS CD CE sing N N 57 LYS CD HD2 sing N N 58 LYS CD HD3 sing N N 59 LYS CE NZ sing N N 60 LYS CE HE2 sing N N 61 LYS CE HE3 sing N N 62 LYS NZ HZ1 sing N N 63 LYS NZ HZ2 sing N N 64 LYS NZ HZ3 sing N N 65 LYS OXT HXT sing N N 66 MET N CA sing N N 67 MET N H sing N N 68 MET N H2 sing N N 69 MET CA C sing N N 70 MET CA CB sing N N 71 MET CA HA sing N N 72 MET C O doub N N 73 MET C OXT sing N N 74 MET CB CG sing N N 75 MET CB HB2 sing N N 76 MET CB HB3 sing N N 77 MET CG SD sing N N 78 MET CG HG2 sing N N 79 MET CG HG3 sing N N 80 MET SD CE sing N N 81 MET CE HE1 sing N N 82 MET CE HE2 sing N N 83 MET CE HE3 sing N N 84 MET OXT HXT sing N N 85 NH2 N HN1 sing N N 86 NH2 N HN2 sing N N 87 PHE N CA sing N N 88 PHE N H sing N N 89 PHE N H2 sing N N 90 PHE CA C sing N N 91 PHE CA CB sing N N 92 PHE CA HA sing N N 93 PHE C O doub N N 94 PHE C OXT sing N N 95 PHE CB CG sing N N 96 PHE CB HB2 sing N N 97 PHE CB HB3 sing N N 98 PHE CG CD1 doub Y N 99 PHE CG CD2 sing Y N 100 PHE CD1 CE1 sing Y N 101 PHE CD1 HD1 sing N N 102 PHE CD2 CE2 doub Y N 103 PHE CD2 HD2 sing N N 104 PHE CE1 CZ doub Y N 105 PHE CE1 HE1 sing N N 106 PHE CE2 CZ sing Y N 107 PHE CE2 HE2 sing N N 108 PHE CZ HZ sing N N 109 PHE OXT HXT sing N N 110 SER N CA sing N N 111 SER N H sing N N 112 SER N H2 sing N N 113 SER CA C sing N N 114 SER CA CB sing N N 115 SER CA HA sing N N 116 SER C O doub N N 117 SER C OXT sing N N 118 SER CB OG sing N N 119 SER CB HB2 sing N N 120 SER CB HB3 sing N N 121 SER OG HG sing N N 122 SER OXT HXT sing N N 123 VAL N CA sing N N 124 VAL N H sing N N 125 VAL N H2 sing N N 126 VAL CA C sing N N 127 VAL CA CB sing N N 128 VAL CA HA sing N N 129 VAL C O doub N N 130 VAL C OXT sing N N 131 VAL CB CG1 sing N N 132 VAL CB CG2 sing N N 133 VAL CB HB sing N N 134 VAL CG1 HG11 sing N N 135 VAL CG1 HG12 sing N N 136 VAL CG1 HG13 sing N N 137 VAL CG2 HG21 sing N N 138 VAL CG2 HG22 sing N N 139 VAL CG2 HG23 sing N N 140 VAL OXT HXT sing N N 141 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/T008741/1 1 'Alzheimers Research UK (ARUK)' 'United Kingdom' ARUK-PG2018-003 2 'Engineering and Physical Sciences Research Council' 'United Kingdom' EP/L016354/1 3 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/L01386X/1 4 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE NEO' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details 'equipped with a 1.7mm microcryoprobe' # _atom_sites.entry_id 8OL8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_