HEADER DNA BINDING PROTEIN 04-APR-23 8OOA TITLE CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX HEXASOME REFINEMENT STATE1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA STRAND 1; COMPND 3 CHAIN: K; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA STRAND 2; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HISTONE H3.1; COMPND 11 CHAIN: M, Q; COMPND 12 SYNONYM: HISTONE H3/A,HISTONE H3/B,HISTONE H3/C,HISTONE H3/D,HISTONE COMPND 13 H3/F,HISTONE H3/H,HISTONE H3/I,HISTONE H3/J,HISTONE H3/K,HISTONE COMPND 14 H3/L; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: HISTONE H4; COMPND 18 CHAIN: N, R; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: HISTONE H2A; COMPND 22 CHAIN: O; COMPND 23 SYNONYM: H2A-CLUSTERED HISTONE 6,HISTONE H2A/L; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 6; COMPND 26 MOLECULE: HISTONE H2B; COMPND 27 CHAIN: P; COMPND 28 SYNONYM: HISTONE H2B.1 A,HISTONE H2B.A,H2B/A,HISTONE H2B.G,H2B/G, COMPND 29 HISTONE H2B.H,H2B/H,HISTONE H2B.K,H2B/K,HISTONE H2B.L,H2B/L; COMPND 30 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: H3C1, H3FA, HIST1H3A, H3C2, H3FL, HIST1H3B, H3C3, H3FC SOURCE 14 HIST1H3C, H3C4, H3FB, HIST1H3D, H3C6, H3FD, HIST1H3E, H3C7, H3FI, SOURCE 15 HIST1H3F, H3C8, H3FH, HIST1H3G, H3C10, H3FK, HIST1H3H, H3C11, H3FF, SOURCE 16 HIST1H3I, H3C12, H3FJ, HIST1H3J; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 GENE: HIST1H4A, H4/A, H4FA, HIST1H4B, H4/I, H4FI, HIST1H4C, H4/G, SOURCE 24 H4FG, HIST1H4D, H4/B, H4FB, HIST1H4E, H4/J, H4FJ, HIST1H4F, H4/C, SOURCE 25 H4FC, HIST1H4H, H4/H, H4FH, HIST1H4I, H4/M, H4FM, HIST1H4J, H4/E, SOURCE 26 H4FE, HIST1H4K, H4/D, H4FD, HIST1H4L, H4/K, H4FK, HIST2H4A, H4/N, SOURCE 27 H4F2, H4FN, HIST2H4, HIST2H4B, H4/O, H4FO, HIST4H4; SOURCE 28 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 30 MOL_ID: 5; SOURCE 31 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 32 ORGANISM_COMMON: HUMAN; SOURCE 33 ORGANISM_TAXID: 9606; SOURCE 34 GENE: H2AC6, H2AFL, HIST1H2AC; SOURCE 35 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 36 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 37 MOL_ID: 6; SOURCE 38 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 39 ORGANISM_COMMON: HUMAN; SOURCE 40 ORGANISM_TAXID: 9606; SOURCE 41 GENE: HIST1H2BC, H2BFL, HIST1H2BE, H2BFH, HIST1H2BF, H2BFG, SOURCE 42 HIST1H2BG, H2BFA, HIST1H2BI, H2BFK; SOURCE 43 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 44 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATP-DEPENDENT CHROMATIN REMODELER, DNA BINDING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR M.ZHANG,A.JUNGBLUT,T.HOFFMANN,S.EUSTERMANN REVDAT 2 02-AUG-23 8OOA 1 JRNL REVDAT 1 26-JUL-23 8OOA 0 JRNL AUTH M.ZHANG,A.JUNGBLUT,F.KUNERT,L.HAUPTMANN,T.HOFFMANN, JRNL AUTH 2 O.KOLESNIKOVA,F.METZNER,M.MOLDT,F.WEIS,F.DIMAIO,K.P.HOPFNER, JRNL AUTH 3 S.EUSTERMANN JRNL TITL HEXASOME-INO80 COMPLEX REVEALS STRUCTURAL BASIS OF JRNL TITL 2 NONCANONICAL NUCLEOSOME REMODELING. JRNL REF SCIENCE V. 381 313 2023 JRNL REFN ESSN 1095-9203 JRNL PMID 37384673 JRNL DOI 10.1126/SCIENCE.ADF6287 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,B.K.POON,R.J.READ,O.V.SOBOLEV,T.C.TERWILLIGER, REMARK 1 AUTH 2 A.URZHUMTSEV,P.D.ADAMS REMARK 1 TITL REAL-SPACE REFINEMENT IN PHENIX FOR CRYO-EM AND REMARK 1 TITL 2 CRYSTALLOGRAPHY. REMARK 1 REF ACTA CRYSTALLOGR D STRUCT V. 74 531 2018 REMARK 1 REF 2 BIOL REMARK 1 REFN ISSN 2059-7983 REMARK 1 PMID 29872004 REMARK 1 DOI 10.1107/S2059798318006551 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.EMSLEY,B.LOHKAMP,W.G.SCOTT,K.COWTAN REMARK 1 TITL FEATURES AND DEVELOPMENT OF COOT. REMARK 1 REF ACTA CRYSTALLOGR D BIOL V. 66 486 2010 REMARK 1 REF 2 CRYSTALLOGR REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 20383002 REMARK 1 DOI 10.1107/S0907444910007493 REMARK 2 REMARK 2 RESOLUTION. 3.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, CTFFIND, ISOLDE, COOT, REMARK 3 PHENIX, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6FML REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : OTHER REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.180 REMARK 3 NUMBER OF PARTICLES : 72400 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8OOA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-APR-23. REMARK 100 THE DEPOSITION ID IS D_1292129713. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : INO80 CORE MODULE IN COMPLEX REMARK 245 WITH HEXASOME REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.88 REMARK 245 SAMPLE SUPPORT DETAILS : 10% OXYGENE 90% ARGONE REMARK 245 SAMPLE VITRIFICATION DETAILS : WAIT TIME OF 5S, BLOT FORCE AT REMARK 245 3, AND A BLOT TIME OF 2S WITH REMARK 245 WHATMAN BLOTTING PAPER (CYTIVA, REMARK 245 CAT NO. 10311807) REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : 11-SUBUNIT CT INO80 CONTAINS REMARK 245 TWO MODULES (CORE AND ARP8 MODULE) EACH MODULE WAS PICKED AND REMARK 245 ANALYZED SEPARATELY THE CORE MODULE + HEXASOME HAS AN OVERALL REMARK 245 WEIGHT OF 0.861MDA THE 11-SUBUNIT CT INO80 + HEXASOME HAS AN REMARK 245 OVERALL WEIGHT OF 1.1MDA INO80, IES2, IES6, IES4,ARP6, RVB1, REMARK 245 RVB2, ARP8, ARP4, ACTIN, TAF14 HEXASOME DNA, 2XH3, 2XH4, H2A, H2B REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 15384 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5036.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 39310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -283.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L, M, N, O, P, Q, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC K -73 REMARK 465 DT K 30 REMARK 465 DT K 31 REMARK 465 DA K 32 REMARK 465 DC K 33 REMARK 465 DT K 34 REMARK 465 DC K 35 REMARK 465 DC K 36 REMARK 465 DC K 37 REMARK 465 DT K 38 REMARK 465 DA K 39 REMARK 465 DG K 40 REMARK 465 DT K 41 REMARK 465 DC K 42 REMARK 465 DT K 43 REMARK 465 DC K 44 REMARK 465 DC K 45 REMARK 465 DA K 46 REMARK 465 DG K 47 REMARK 465 DG K 48 REMARK 465 DC K 49 REMARK 465 DA K 50 REMARK 465 DC K 51 REMARK 465 DG K 52 REMARK 465 DT K 53 REMARK 465 DG K 54 REMARK 465 DT K 55 REMARK 465 DC K 56 REMARK 465 DA K 57 REMARK 465 DG K 58 REMARK 465 DA K 59 REMARK 465 DT K 60 REMARK 465 DA K 61 REMARK 465 DT K 62 REMARK 465 DA K 63 REMARK 465 DT K 64 REMARK 465 DA K 65 REMARK 465 DC K 66 REMARK 465 DA K 67 REMARK 465 DT K 68 REMARK 465 DC K 69 REMARK 465 DC K 70 REMARK 465 DT K 71 REMARK 465 DG K 72 REMARK 465 DT K 73 REMARK 465 DG K 74 REMARK 465 DC K 75 REMARK 465 DA K 76 REMARK 465 DT K 77 REMARK 465 DG K 78 REMARK 465 DT K 79 REMARK 465 DA K 80 REMARK 465 DT K 81 REMARK 465 DT K 82 REMARK 465 DG K 83 REMARK 465 DA K 84 REMARK 465 DA K 85 REMARK 465 DC K 86 REMARK 465 DA K 87 REMARK 465 DG K 88 REMARK 465 DC K 89 REMARK 465 DG K 90 REMARK 465 DA K 91 REMARK 465 DC K 92 REMARK 465 DC K 93 REMARK 465 DT K 94 REMARK 465 DT K 95 REMARK 465 DG K 96 REMARK 465 DC K 97 REMARK 465 DC K 98 REMARK 465 DG K 99 REMARK 465 DG K 100 REMARK 465 DT K 101 REMARK 465 DG K 102 REMARK 465 DC K 103 REMARK 465 DC K 104 REMARK 465 DA K 105 REMARK 465 DG K 106 REMARK 465 DT K 107 REMARK 465 DC K 108 REMARK 465 DG K 109 REMARK 465 DG K 110 REMARK 465 DA K 111 REMARK 465 DT K 112 REMARK 465 DA K 113 REMARK 465 DG K 114 REMARK 465 DT K 115 REMARK 465 DG K 116 REMARK 465 DT K 117 REMARK 465 DT K 118 REMARK 465 DC K 119 REMARK 465 DC K 120 REMARK 465 DG K 121 REMARK 465 DA K 122 REMARK 465 DG K 123 REMARK 465 DC K 124 REMARK 465 DT K 125 REMARK 465 DC K 126 REMARK 465 DC K 127 REMARK 465 DC K 128 REMARK 465 DA K 129 REMARK 465 DC K 130 REMARK 465 DT K 131 REMARK 465 DC K 132 REMARK 465 DT K 133 REMARK 465 DA K 134 REMARK 465 DG K 135 REMARK 465 DA K 136 REMARK 465 DG K 137 REMARK 465 DG K 138 REMARK 465 DA K 139 REMARK 465 DT K 140 REMARK 465 DC K 141 REMARK 465 DC K 142 REMARK 465 DC K 143 REMARK 465 DC K 144 REMARK 465 DG K 145 REMARK 465 DG K 146 REMARK 465 DG K 147 REMARK 465 DT K 148 REMARK 465 DA K 149 REMARK 465 DC K 150 REMARK 465 DC K 151 REMARK 465 DG K 152 REMARK 465 DC L -152 REMARK 465 DG L -151 REMARK 465 DG L -150 REMARK 465 DT L -149 REMARK 465 DA L -148 REMARK 465 DC L -147 REMARK 465 DC L -146 REMARK 465 DC L -145 REMARK 465 DG L -144 REMARK 465 DG L -143 REMARK 465 DG L -142 REMARK 465 DG L -141 REMARK 465 DA L -140 REMARK 465 DT L -139 REMARK 465 DC L -138 REMARK 465 DC L -137 REMARK 465 DT L -136 REMARK 465 DC L -135 REMARK 465 DT L -134 REMARK 465 DA L -133 REMARK 465 DG L -132 REMARK 465 DA L -131 REMARK 465 DG L -130 REMARK 465 DT L -129 REMARK 465 DG L -128 REMARK 465 DG L -127 REMARK 465 DG L -126 REMARK 465 DA L -125 REMARK 465 DG L -124 REMARK 465 DC L -123 REMARK 465 DT L -122 REMARK 465 DC L -121 REMARK 465 DG L -120 REMARK 465 DG L -119 REMARK 465 DA L -118 REMARK 465 DA L -117 REMARK 465 DC L -116 REMARK 465 DA L -115 REMARK 465 DC L -114 REMARK 465 DT L -113 REMARK 465 DA L -112 REMARK 465 DT L -111 REMARK 465 DC L -110 REMARK 465 DC L -109 REMARK 465 DG L -108 REMARK 465 DA L -107 REMARK 465 DC L -106 REMARK 465 DT L -105 REMARK 465 DG L -104 REMARK 465 DG L -103 REMARK 465 DC L -102 REMARK 465 DA L -101 REMARK 465 DC L -100 REMARK 465 DC L -99 REMARK 465 DG L -98 REMARK 465 DG L -97 REMARK 465 DC L -96 REMARK 465 DA L -95 REMARK 465 DA L -94 REMARK 465 DG L -93 REMARK 465 DG L -92 REMARK 465 DT L -91 REMARK 465 DC L -90 REMARK 465 DG L -89 REMARK 465 DC L -88 REMARK 465 DT L -87 REMARK 465 DG L -86 REMARK 465 DT L -85 REMARK 465 DT L -84 REMARK 465 DC L -83 REMARK 465 DA L -82 REMARK 465 DA L -81 REMARK 465 DT L -80 REMARK 465 DA L -79 REMARK 465 DC L -78 REMARK 465 DA L -77 REMARK 465 DT L -76 REMARK 465 DG L -75 REMARK 465 DC L -74 REMARK 465 DA L -73 REMARK 465 DC L -72 REMARK 465 DA L -71 REMARK 465 DG L -70 REMARK 465 DG L -69 REMARK 465 DA L -68 REMARK 465 DT L -67 REMARK 465 DG L -66 REMARK 465 DT L -65 REMARK 465 DA L -64 REMARK 465 DT L -63 REMARK 465 DA L -62 REMARK 465 DT L -61 REMARK 465 DA L -60 REMARK 465 DT L -59 REMARK 465 DC L -58 REMARK 465 DT L -57 REMARK 465 DG L -56 REMARK 465 DA L -55 REMARK 465 DC L -54 REMARK 465 DA L -53 REMARK 465 DC L -52 REMARK 465 DG L -51 REMARK 465 DT L -50 REMARK 465 DG L -49 REMARK 465 DC L -48 REMARK 465 DC L -47 REMARK 465 DT L -46 REMARK 465 DG L -45 REMARK 465 DG L -44 REMARK 465 DA L -43 REMARK 465 DG L -42 REMARK 465 DA L -41 REMARK 465 DC L -40 REMARK 465 DT L -39 REMARK 465 DA L -38 REMARK 465 DG L -37 REMARK 465 DG L -36 REMARK 465 DG L -35 REMARK 465 DA L -34 REMARK 465 DG L -33 REMARK 465 DT L -32 REMARK 465 DA L -31 REMARK 465 DA L -30 REMARK 465 DG L 73 REMARK 465 ALA M 1 REMARK 465 ARG M 2 REMARK 465 THR M 3 REMARK 465 LYS M 4 REMARK 465 GLN M 5 REMARK 465 THR M 6 REMARK 465 ALA M 7 REMARK 465 ARG M 8 REMARK 465 LYS M 9 REMARK 465 SER M 10 REMARK 465 THR M 11 REMARK 465 GLY M 12 REMARK 465 GLY M 13 REMARK 465 LYS M 14 REMARK 465 ALA M 15 REMARK 465 PRO M 16 REMARK 465 ARG M 17 REMARK 465 LYS M 18 REMARK 465 GLN M 19 REMARK 465 LEU M 20 REMARK 465 ALA M 21 REMARK 465 THR M 22 REMARK 465 LYS M 23 REMARK 465 ALA M 24 REMARK 465 ALA M 25 REMARK 465 ARG M 26 REMARK 465 LYS M 27 REMARK 465 SER M 28 REMARK 465 ALA M 29 REMARK 465 PRO M 30 REMARK 465 ALA M 31 REMARK 465 THR M 32 REMARK 465 GLY M 33 REMARK 465 GLY M 34 REMARK 465 VAL M 35 REMARK 465 LYS M 36 REMARK 465 LYS M 37 REMARK 465 PRO M 38 REMARK 465 HIS M 39 REMARK 465 ARG M 40 REMARK 465 TYR M 41 REMARK 465 ARG M 42 REMARK 465 PRO M 43 REMARK 465 GLY M 44 REMARK 465 THR M 45 REMARK 465 VAL M 46 REMARK 465 ALA M 47 REMARK 465 LEU M 48 REMARK 465 ARG M 49 REMARK 465 GLU M 50 REMARK 465 ILE M 51 REMARK 465 ARG M 52 REMARK 465 ARG M 53 REMARK 465 TYR M 54 REMARK 465 GLN M 55 REMARK 465 LYS M 56 REMARK 465 SER M 57 REMARK 465 THR M 58 REMARK 465 GLU M 59 REMARK 465 LEU M 60 REMARK 465 ALA M 135 REMARK 465 SER N 1 REMARK 465 GLY N 2 REMARK 465 ARG N 3 REMARK 465 GLY N 4 REMARK 465 LYS N 5 REMARK 465 GLY N 6 REMARK 465 GLY N 7 REMARK 465 LYS N 8 REMARK 465 GLY N 9 REMARK 465 LEU N 10 REMARK 465 GLY N 11 REMARK 465 LYS N 12 REMARK 465 GLY N 13 REMARK 465 GLY N 14 REMARK 465 ALA N 15 REMARK 465 LYS N 16 REMARK 465 ARG N 17 REMARK 465 HIS N 18 REMARK 465 ARG N 19 REMARK 465 LYS N 20 REMARK 465 THR N 96 REMARK 465 LEU N 97 REMARK 465 TYR N 98 REMARK 465 GLY N 99 REMARK 465 PHE N 100 REMARK 465 GLY N 101 REMARK 465 GLY N 102 REMARK 465 SER O 1 REMARK 465 GLY O 2 REMARK 465 ARG O 3 REMARK 465 GLY O 4 REMARK 465 LYS O 5 REMARK 465 GLN O 6 REMARK 465 GLY O 7 REMARK 465 GLY O 8 REMARK 465 LYS O 9 REMARK 465 ALA O 10 REMARK 465 THR O 120 REMARK 465 GLU O 121 REMARK 465 SER O 122 REMARK 465 HIS O 123 REMARK 465 HIS O 124 REMARK 465 LYS O 125 REMARK 465 ALA O 126 REMARK 465 LYS O 127 REMARK 465 GLY O 128 REMARK 465 LYS O 129 REMARK 465 PRO P -2 REMARK 465 GLU P -1 REMARK 465 PRO P 0 REMARK 465 ALA P 1 REMARK 465 LYS P 2 REMARK 465 SER P 3 REMARK 465 ALA P 4 REMARK 465 PRO P 5 REMARK 465 ALA P 6 REMARK 465 PRO P 7 REMARK 465 LYS P 8 REMARK 465 LYS P 9 REMARK 465 GLY P 10 REMARK 465 SER P 11 REMARK 465 LYS P 12 REMARK 465 LYS P 13 REMARK 465 ALA P 14 REMARK 465 VAL P 15 REMARK 465 THR P 16 REMARK 465 LYS P 17 REMARK 465 ALA P 18 REMARK 465 GLN P 19 REMARK 465 LYS P 20 REMARK 465 LYS P 21 REMARK 465 ASP P 22 REMARK 465 GLY P 23 REMARK 465 LYS P 24 REMARK 465 LYS P 25 REMARK 465 ARG P 26 REMARK 465 LYS P 27 REMARK 465 ARG P 28 REMARK 465 SER P 29 REMARK 465 ALA Q 1 REMARK 465 ARG Q 2 REMARK 465 THR Q 3 REMARK 465 LYS Q 4 REMARK 465 GLN Q 5 REMARK 465 THR Q 6 REMARK 465 ALA Q 7 REMARK 465 ARG Q 8 REMARK 465 LYS Q 9 REMARK 465 SER Q 10 REMARK 465 THR Q 11 REMARK 465 GLY Q 12 REMARK 465 GLY Q 13 REMARK 465 LYS Q 14 REMARK 465 ALA Q 15 REMARK 465 PRO Q 16 REMARK 465 ARG Q 17 REMARK 465 LYS Q 18 REMARK 465 GLN Q 19 REMARK 465 LEU Q 20 REMARK 465 ALA Q 21 REMARK 465 THR Q 22 REMARK 465 LYS Q 23 REMARK 465 ALA Q 24 REMARK 465 ALA Q 25 REMARK 465 ARG Q 26 REMARK 465 LYS Q 27 REMARK 465 SER Q 28 REMARK 465 ALA Q 29 REMARK 465 PRO Q 30 REMARK 465 ALA Q 31 REMARK 465 THR Q 32 REMARK 465 GLY Q 33 REMARK 465 GLY Q 34 REMARK 465 VAL Q 35 REMARK 465 LYS Q 36 REMARK 465 ALA Q 135 REMARK 465 SER R 1 REMARK 465 GLY R 2 REMARK 465 ARG R 3 REMARK 465 GLY R 4 REMARK 465 LYS R 5 REMARK 465 GLY R 6 REMARK 465 GLY R 7 REMARK 465 LYS R 8 REMARK 465 GLY R 9 REMARK 465 LEU R 10 REMARK 465 GLY R 11 REMARK 465 LYS R 12 REMARK 465 GLY R 13 REMARK 465 GLY R 14 REMARK 465 ALA R 15 REMARK 465 LYS R 16 REMARK 465 ARG R 17 REMARK 465 HIS R 18 REMARK 465 ARG R 19 REMARK 465 LYS R 20 REMARK 465 VAL R 21 REMARK 465 LEU R 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC K -56 C5' DC K -56 C4' 0.043 REMARK 500 DG K 26 C5' DG K 26 C4' 0.050 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS P 46 83.22 -150.97 REMARK 500 ARG Q 131 0.79 -67.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG N 92 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-17006 RELATED DB: EMDB REMARK 900 COMPOSITE MAP REMARK 900 RELATED ID: 8OO7 RELATED DB: PDB REMARK 900 COMPOSITE MODEL REMARK 900 RELATED ID: EMD-17008 RELATED DB: EMDB REMARK 900 INO80 CORE BOUND TO HEXASOME COMPOSITE MODEL OF STATE 1 REMARK 900 RELATED ID: EMD-17023 RELATED DB: EMDB REMARK 900 FOCUSED MAP / LOCAL REFINEMENT REMARK 900 RELATED ID: 8OOA RELATED DB: PDB REMARK 900 MODEL FOR FOCUSED MAP / LOCAL REFINEMENT REMARK 900 RELATED ID: EMD-17019 RELATED DB: EMDB REMARK 900 CONSENSUS MAP DBREF 8OOA K -73 152 PDB 8OOA 8OOA -73 152 DBREF 8OOA L -152 73 PDB 8OOA 8OOA -152 73 DBREF 8OOA M 1 135 UNP P68431 H31_HUMAN 2 136 DBREF 8OOA N 1 102 UNP P62805 H4_HUMAN 2 103 DBREF 8OOA O 1 129 UNP Q93077 H2A1C_HUMAN 2 130 DBREF 8OOA P -2 122 UNP P62807 H2B1C_HUMAN 2 126 DBREF 8OOA Q 1 135 UNP P68431 H31_HUMAN 2 136 DBREF 8OOA R 1 102 UNP P62805 H4_HUMAN 2 103 SEQRES 1 K 226 DC DT DG DG DA DG DA DA DT DC DC DC DG SEQRES 2 K 226 DG DT DG DC DC DG DA DG DG DC DC DG DC SEQRES 3 K 226 DT DC DA DA DT DT DG DG DT DC DG DT DA SEQRES 4 K 226 DG DC DA DA DG DC DT DC DT DA DG DC DA SEQRES 5 K 226 DC DC DG DC DT DT DA DA DA DC DG DC DA SEQRES 6 K 226 DC DG DT DA DC DG DC DG DC DT DG DT DC SEQRES 7 K 226 DC DC DC DC DG DC DG DT DT DT DT DA DA SEQRES 8 K 226 DC DC DG DC DC DA DA DG DG DG DG DA DT SEQRES 9 K 226 DT DA DC DT DC DC DC DT DA DG DT DC DT SEQRES 10 K 226 DC DC DA DG DG DC DA DC DG DT DG DT DC SEQRES 11 K 226 DA DG DA DT DA DT DA DT DA DC DA DT DC SEQRES 12 K 226 DC DT DG DT DG DC DA DT DG DT DA DT DT SEQRES 13 K 226 DG DA DA DC DA DG DC DG DA DC DC DT DT SEQRES 14 K 226 DG DC DC DG DG DT DG DC DC DA DG DT DC SEQRES 15 K 226 DG DG DA DT DA DG DT DG DT DT DC DC DG SEQRES 16 K 226 DA DG DC DT DC DC DC DA DC DT DC DT DA SEQRES 17 K 226 DG DA DG DG DA DT DC DC DC DC DG DG DG SEQRES 18 K 226 DT DA DC DC DG SEQRES 1 L 226 DC DG DG DT DA DC DC DC DG DG DG DG DA SEQRES 2 L 226 DT DC DC DT DC DT DA DG DA DG DT DG DG SEQRES 3 L 226 DG DA DG DC DT DC DG DG DA DA DC DA DC SEQRES 4 L 226 DT DA DT DC DC DG DA DC DT DG DG DC DA SEQRES 5 L 226 DC DC DG DG DC DA DA DG DG DT DC DG DC SEQRES 6 L 226 DT DG DT DT DC DA DA DT DA DC DA DT DG SEQRES 7 L 226 DC DA DC DA DG DG DA DT DG DT DA DT DA SEQRES 8 L 226 DT DA DT DC DT DG DA DC DA DC DG DT DG SEQRES 9 L 226 DC DC DT DG DG DA DG DA DC DT DA DG DG SEQRES 10 L 226 DG DA DG DT DA DA DT DC DC DC DC DT DT SEQRES 11 L 226 DG DG DC DG DG DT DT DA DA DA DA DC DG SEQRES 12 L 226 DC DG DG DG DG DG DA DC DA DG DC DG DC SEQRES 13 L 226 DG DT DA DC DG DT DG DC DG DT DT DT DA SEQRES 14 L 226 DA DG DC DG DG DT DG DC DT DA DG DA DG SEQRES 15 L 226 DC DT DT DG DC DT DA DC DG DA DC DC DA SEQRES 16 L 226 DA DT DT DG DA DG DC DG DG DC DC DT DC SEQRES 17 L 226 DG DG DC DA DC DC DG DG DG DA DT DT DC SEQRES 18 L 226 DT DC DC DA DG SEQRES 1 M 135 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 M 135 LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA ARG SEQRES 3 M 135 LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO HIS SEQRES 4 M 135 ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE ARG SEQRES 5 M 135 ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS LEU SEQRES 6 M 135 PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP PHE SEQRES 7 M 135 LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET ALA SEQRES 8 M 135 LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY LEU PHE SEQRES 9 M 135 GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG VAL SEQRES 10 M 135 THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG ILE SEQRES 11 M 135 ARG GLY GLU ARG ALA SEQRES 1 N 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 N 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 N 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 N 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 N 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 N 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 N 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 N 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 O 129 SER GLY ARG GLY LYS GLN GLY GLY LYS ALA ARG ALA LYS SEQRES 2 O 129 ALA LYS SER ARG SER SER ARG ALA GLY LEU GLN PHE PRO SEQRES 3 O 129 VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN TYR SEQRES 4 O 129 ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU ALA SEQRES 5 O 129 ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU LEU SEQRES 6 O 129 ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG ILE SEQRES 7 O 129 ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP GLU SEQRES 8 O 129 GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA GLN SEQRES 9 O 129 GLY GLY VAL LEU PRO ASN ILE GLN ALA VAL LEU LEU PRO SEQRES 10 O 129 LYS LYS THR GLU SER HIS HIS LYS ALA LYS GLY LYS SEQRES 1 P 125 PRO GLU PRO ALA LYS SER ALA PRO ALA PRO LYS LYS GLY SEQRES 2 P 125 SER LYS LYS ALA VAL THR LYS ALA GLN LYS LYS ASP GLY SEQRES 3 P 125 LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER VAL SEQRES 4 P 125 TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP THR SEQRES 5 P 125 GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER PHE SEQRES 6 P 125 VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SER SEQRES 7 P 125 ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SER SEQRES 8 P 125 ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO GLY SEQRES 9 P 125 GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA SEQRES 10 P 125 VAL THR LYS TYR THR SER SER LYS SEQRES 1 Q 135 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 Q 135 LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA ARG SEQRES 3 Q 135 LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO HIS SEQRES 4 Q 135 ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE ARG SEQRES 5 Q 135 ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS LEU SEQRES 6 Q 135 PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP PHE SEQRES 7 Q 135 LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET ALA SEQRES 8 Q 135 LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY LEU PHE SEQRES 9 Q 135 GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG VAL SEQRES 10 Q 135 THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG ILE SEQRES 11 Q 135 ARG GLY GLU ARG ALA SEQRES 1 R 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 R 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 R 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 R 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 R 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 R 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 R 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 R 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY HELIX 1 AA1 ARG M 63 ASP M 77 1 15 HELIX 2 AA2 GLN M 85 HIS M 113 1 29 HELIX 3 AA3 ALA M 114 ARG M 116 5 3 HELIX 4 AA4 MET M 120 ARG M 131 1 12 HELIX 5 AA5 ASP N 24 ILE N 29 5 6 HELIX 6 AA6 THR N 30 GLY N 41 1 12 HELIX 7 AA7 SER N 47 ALA N 76 1 30 HELIX 8 AA8 THR N 82 ARG N 95 1 14 HELIX 9 AA9 SER O 16 GLY O 22 1 7 HELIX 10 AB1 PRO O 26 GLY O 37 1 12 HELIX 11 AB2 GLY O 46 ASN O 73 1 28 HELIX 12 AB3 ILE O 79 ASN O 89 1 11 HELIX 13 AB4 GLU O 92 LEU O 97 1 6 HELIX 14 AB5 GLN O 112 LEU O 116 5 5 HELIX 15 AB6 TYR P 34 LYS P 43 1 10 HELIX 16 AB7 SER P 52 ASN P 81 1 30 HELIX 17 AB8 THR P 87 LEU P 99 1 13 HELIX 18 AB9 PRO P 100 LYS P 122 1 23 HELIX 19 AC1 GLY Q 44 GLN Q 55 1 12 HELIX 20 AC2 ARG Q 63 ASP Q 77 1 15 HELIX 21 AC3 GLN Q 85 ALA Q 114 1 30 HELIX 22 AC4 MET Q 120 ARG Q 131 1 12 HELIX 23 AC5 ASP R 24 ILE R 29 5 6 HELIX 24 AC6 THR R 30 GLY R 41 1 12 HELIX 25 AC7 LEU R 49 ALA R 76 1 28 HELIX 26 AC8 THR R 82 GLN R 93 1 12 SHEET 1 AA1 2 ARG M 83 PHE M 84 0 SHEET 2 AA1 2 THR N 80 VAL N 81 1 O VAL N 81 N ARG M 83 SHEET 1 AA2 2 THR M 118 ILE M 119 0 SHEET 2 AA2 2 ARG N 45 ILE N 46 1 O ARG N 45 N ILE M 119 SHEET 1 AA3 2 ARG O 42 VAL O 43 0 SHEET 2 AA3 2 THR P 85 ILE P 86 1 O ILE P 86 N ARG O 42 SHEET 1 AA4 2 ARG O 77 ILE O 78 0 SHEET 2 AA4 2 GLY P 50 ILE P 51 1 O GLY P 50 N ILE O 78 SHEET 1 AA5 2 VAL O 100 ILE O 102 0 SHEET 2 AA5 2 THR R 96 TYR R 98 1 O TYR R 98 N THR O 101 SHEET 1 AA6 2 ARG Q 83 PHE Q 84 0 SHEET 2 AA6 2 THR R 80 VAL R 81 1 O VAL R 81 N ARG Q 83 SHEET 1 AA7 2 THR Q 118 ILE Q 119 0 SHEET 2 AA7 2 ARG R 45 ILE R 46 1 O ARG R 45 N ILE Q 119 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000