HEADER HYDROLASE 10-MAY-23 8P0C TITLE RUBELLA VIRUS P150 MACRO DOMAIN (APO) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL POLYPROTEIN P200; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.2.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUBELLA VIRUS; SOURCE 3 ORGANISM_TAXID: 11041; SOURCE 4 GENE: NSP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MACRO DOMAIN, A1PP DOMAIN, ADP-RIBOSYLHYDROLASE, ADP-RIBOSE, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.A.STOLL,Y.MODIS REVDAT 4 06-MAR-24 8P0C 1 JRNL REVDAT 3 28-FEB-24 8P0C 1 JRNL REVDAT 2 14-FEB-24 8P0C 1 JRNL REVDAT 1 17-JAN-24 8P0C 0 JRNL AUTH G.A.STOLL,N.NIKOLOPOULOS,H.ZHAI,L.ZHANG,C.H.DOUSE,Y.MODIS JRNL TITL CRYSTAL STRUCTURE AND BIOCHEMICAL ACTIVITY OF THE JRNL TITL 2 MACRODOMAIN FROM RUBELLA VIRUS P150. JRNL REF J.VIROL. V. 98 77723 2024 JRNL REFN ESSN 1098-5514 JRNL PMID 38289106 JRNL DOI 10.1128/JVI.01777-23 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 50.6 REMARK 3 NUMBER OF REFLECTIONS : 23294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1183 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.0000 - 3.4500 1.00 5656 306 0.1623 0.2069 REMARK 3 2 3.4500 - 2.7400 0.92 5060 280 0.1867 0.2341 REMARK 3 3 2.7400 - 2.3900 0.71 3872 188 0.2137 0.2375 REMARK 3 4 2.3900 - 2.1700 0.54 2937 169 0.2165 0.2317 REMARK 3 5 2.1700 - 2.0200 0.47 2530 132 0.2254 0.2738 REMARK 3 6 2.0200 - 1.9000 0.28 1499 80 0.2543 0.3294 REMARK 3 7 1.9000 - 1.8000 0.09 505 26 0.2833 0.3508 REMARK 3 8 1.8000 - 1.7200 0.01 52 2 0.2951 0.0940 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.168 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.512 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2781 REMARK 3 ANGLE : 0.818 3810 REMARK 3 CHIRALITY : 0.046 438 REMARK 3 PLANARITY : 0.016 508 REMARK 3 DIHEDRAL : 5.765 413 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0330 14.7920 52.4091 REMARK 3 T TENSOR REMARK 3 T11: 0.1624 T22: 0.1863 REMARK 3 T33: 0.1783 T12: -0.0231 REMARK 3 T13: -0.0014 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 3.7172 L22: 3.5057 REMARK 3 L33: 3.0219 L12: -1.8452 REMARK 3 L13: -0.2113 L23: -0.1002 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: -0.2127 S13: -0.4856 REMARK 3 S21: -0.2816 S22: 0.0602 S23: 0.1994 REMARK 3 S31: 0.4711 S32: -0.1748 S33: 0.0212 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2413 13.7634 57.5849 REMARK 3 T TENSOR REMARK 3 T11: 0.2352 T22: 0.4464 REMARK 3 T33: 0.2361 T12: 0.0867 REMARK 3 T13: 0.0058 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 4.1669 L22: 0.5129 REMARK 3 L33: 3.3780 L12: 0.4575 REMARK 3 L13: 0.6606 L23: 0.1156 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: -0.2441 S13: -0.4185 REMARK 3 S21: 0.0693 S22: 0.0392 S23: -0.1394 REMARK 3 S31: 0.4607 S32: 1.0951 S33: -0.0136 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8745 24.3356 64.7414 REMARK 3 T TENSOR REMARK 3 T11: 0.3258 T22: 0.4875 REMARK 3 T33: 0.2461 T12: 0.0834 REMARK 3 T13: -0.1328 T23: -0.1774 REMARK 3 L TENSOR REMARK 3 L11: 2.0937 L22: 3.0386 REMARK 3 L33: 3.1182 L12: 0.3996 REMARK 3 L13: -0.1776 L23: -0.6576 REMARK 3 S TENSOR REMARK 3 S11: -0.2967 S12: -0.6887 S13: 0.5845 REMARK 3 S21: 0.4998 S22: -0.2057 S23: -0.1517 REMARK 3 S31: -0.8669 S32: 0.3944 S33: -0.0625 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7256 24.3611 56.1111 REMARK 3 T TENSOR REMARK 3 T11: 0.1058 T22: 0.1762 REMARK 3 T33: 0.1529 T12: -0.0094 REMARK 3 T13: 0.0040 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 4.0033 L22: 1.8996 REMARK 3 L33: 4.2878 L12: -0.9530 REMARK 3 L13: -0.3626 L23: -0.4241 REMARK 3 S TENSOR REMARK 3 S11: -0.0423 S12: -0.4064 S13: 0.2864 REMARK 3 S21: 0.0510 S22: 0.0090 S23: -0.1165 REMARK 3 S31: -0.2782 S32: 0.3046 S33: 0.0011 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1897 23.7762 64.2087 REMARK 3 T TENSOR REMARK 3 T11: 0.1831 T22: 0.3980 REMARK 3 T33: 0.1923 T12: 0.0120 REMARK 3 T13: 0.0212 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 6.0575 L22: 3.2364 REMARK 3 L33: 5.2134 L12: -4.2027 REMARK 3 L13: -0.9848 L23: -0.1053 REMARK 3 S TENSOR REMARK 3 S11: 0.1050 S12: -0.3016 S13: 0.0712 REMARK 3 S21: 0.1636 S22: -0.1789 S23: -0.2063 REMARK 3 S31: -0.3343 S32: 0.0421 S33: 0.2973 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.3689 9.5928 21.2484 REMARK 3 T TENSOR REMARK 3 T11: 0.1009 T22: 0.1233 REMARK 3 T33: 0.1686 T12: 0.0120 REMARK 3 T13: 0.0045 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 2.4662 L22: 3.7329 REMARK 3 L33: 3.2984 L12: 1.0846 REMARK 3 L13: -0.6330 L23: -1.0286 REMARK 3 S TENSOR REMARK 3 S11: -0.1060 S12: 0.0108 S13: -0.2600 REMARK 3 S21: 0.0648 S22: 0.1490 S23: -0.1952 REMARK 3 S31: 0.1730 S32: 0.1535 S33: -0.1158 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7023 11.2563 29.0180 REMARK 3 T TENSOR REMARK 3 T11: 0.2539 T22: 0.3874 REMARK 3 T33: 0.3008 T12: -0.0155 REMARK 3 T13: 0.0401 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 2.6991 L22: 1.6192 REMARK 3 L33: 3.7371 L12: 0.5437 REMARK 3 L13: 0.2835 L23: -0.5767 REMARK 3 S TENSOR REMARK 3 S11: 0.0653 S12: -0.0952 S13: -0.3412 REMARK 3 S21: 0.0486 S22: 0.1198 S23: 0.5764 REMARK 3 S31: 0.3586 S32: -0.9126 S33: -0.1437 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3252 19.9970 23.0918 REMARK 3 T TENSOR REMARK 3 T11: 0.1473 T22: 0.1292 REMARK 3 T33: 0.1368 T12: 0.0245 REMARK 3 T13: 0.0479 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 2.6654 L22: 1.3569 REMARK 3 L33: 5.2848 L12: 0.3694 REMARK 3 L13: 1.6732 L23: -0.8031 REMARK 3 S TENSOR REMARK 3 S11: -0.1254 S12: -0.1382 S13: 0.1373 REMARK 3 S21: 0.0652 S22: 0.2061 S23: 0.1447 REMARK 3 S31: -0.2726 S32: -0.3677 S33: -0.1074 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8629 21.9245 16.3670 REMARK 3 T TENSOR REMARK 3 T11: 0.1913 T22: 0.1309 REMARK 3 T33: 0.1700 T12: -0.0212 REMARK 3 T13: 0.0327 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 6.0138 L22: 2.9869 REMARK 3 L33: 6.9037 L12: 1.4890 REMARK 3 L13: 2.4008 L23: 2.7884 REMARK 3 S TENSOR REMARK 3 S11: -0.1430 S12: 0.6399 S13: 0.5853 REMARK 3 S21: 0.0595 S22: 0.1825 S23: 0.2338 REMARK 3 S31: -0.4922 S32: 0.4209 S33: -0.0583 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8220 16.0741 24.7425 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 0.1253 REMARK 3 T33: 0.1313 T12: -0.0066 REMARK 3 T13: 0.0550 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.7018 L22: 1.1385 REMARK 3 L33: 3.4984 L12: -1.4153 REMARK 3 L13: -0.9099 L23: -0.6476 REMARK 3 S TENSOR REMARK 3 S11: -0.1366 S12: -0.1573 S13: 0.0396 REMARK 3 S21: -0.0172 S22: 0.4277 S23: -0.3333 REMARK 3 S31: -0.4200 S32: 0.5157 S33: -0.2750 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 171 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1793 18.0248 6.8386 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.2969 REMARK 3 T33: 0.1391 T12: -0.0005 REMARK 3 T13: 0.0166 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 6.0999 L22: 6.7574 REMARK 3 L33: 7.0545 L12: 0.7226 REMARK 3 L13: -1.0431 L23: -3.2450 REMARK 3 S TENSOR REMARK 3 S11: 0.2791 S12: 0.2865 S13: 0.2757 REMARK 3 S21: 0.1086 S22: -0.3301 S23: 0.2656 REMARK 3 S31: -0.3074 S32: -0.2273 S33: -0.0631 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8P0C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1292130373. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : FOCUSSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC 1.0.5 REMARK 200 DATA SCALING SOFTWARE : STARANISO 1.0.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23298 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 64.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 1.03000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MRBUMP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14.4% PEG 6K, 1.26 M LICL, 0.1 M REMARK 280 BICINE PH 9, SUPPLEMENTED WITH 10% GLYCEROL FOR PRIOR TO REMARK 280 FREEZING, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.34100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.78450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 67.75350 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.34100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.78450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.75350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.34100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.78450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.75350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.34100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.78450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 67.75350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 224 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 328 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 187 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 HIS A 190 REMARK 465 MET B 1 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 465 HIS B 190 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 99 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLY A 30 O HOH A 206 1.29 REMARK 500 H ASP B 3 O HOH B 208 1.35 REMARK 500 HE2 HIS A 186 O HOH A 205 1.37 REMARK 500 OD1 ASP A 3 O HOH A 201 1.40 REMARK 500 O HOH B 268 O HOH B 304 1.46 REMARK 500 OD1 ASP B 3 O HOH B 201 1.49 REMARK 500 H ARG B 171 O HOH B 210 1.49 REMARK 500 H ALA B 93 O HOH B 212 1.50 REMARK 500 HE ARG A 66 O HOH A 210 1.52 REMARK 500 HH21 ARG A 155 O HOH A 207 1.53 REMARK 500 O HOH A 336 O HOH A 359 1.54 REMARK 500 HE ARG A 95 O HOH A 211 1.54 REMARK 500 H ASP A 99 O HOH A 209 1.55 REMARK 500 O HOH B 282 O HOH B 327 1.60 REMARK 500 O HOH B 204 O HOH B 321 1.63 REMARK 500 O HOH B 246 O HOH B 342 1.67 REMARK 500 O HOH A 223 O HOH A 324 1.75 REMARK 500 O ASP A 99 O HOH A 202 1.77 REMARK 500 OE2 GLU A 107 O HOH A 203 1.78 REMARK 500 O LEU A 42 O HOH A 204 1.83 REMARK 500 O HOH B 312 O HOH B 351 1.83 REMARK 500 O HOH B 310 O HOH B 344 1.83 REMARK 500 O HOH B 305 O HOH B 349 1.93 REMARK 500 O HOH A 252 O HOH A 318 1.94 REMARK 500 O HOH B 262 O HOH B 352 1.95 REMARK 500 O HOH B 277 O HOH B 321 1.96 REMARK 500 O HOH A 271 O HOH A 348 2.00 REMARK 500 NE2 HIS A 186 O HOH A 205 2.01 REMARK 500 OE2 GLU B 107 O HOH B 202 2.04 REMARK 500 OD2 ASP B 99 O HOH B 203 2.05 REMARK 500 O PRO B 97 O HOH B 204 2.06 REMARK 500 O HOH A 351 O HOH A 358 2.06 REMARK 500 N GLY A 30 O HOH A 206 2.08 REMARK 500 O PRO A 100 O HOH A 202 2.09 REMARK 500 O GLU B 145 O HOH B 205 2.11 REMARK 500 O HOH A 216 O HOH A 328 2.11 REMARK 500 O HOH A 322 O HOH A 346 2.11 REMARK 500 O THR B 57 O HOH B 206 2.13 REMARK 500 NH2 ARG B 148 O HOH B 207 2.13 REMARK 500 N ASP B 3 O HOH B 208 2.15 REMARK 500 O HOH A 260 O HOH B 292 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ARG A 96 HH12 ARG B 98 6555 1.58 REMARK 500 O HOH A 287 O HOH B 285 8455 1.99 REMARK 500 O HOH A 362 O HOH B 361 6555 2.14 REMARK 500 O ARG A 96 NH1 ARG B 98 6555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 100 175.18 -54.82 REMARK 500 HIS B 81 -115.31 59.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 161 0.19 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 364 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH A 365 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH A 366 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH A 367 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A 368 DISTANCE = 8.17 ANGSTROMS DBREF 8P0C A 3 181 UNP G3M8F4 G3M8F4_RUBV 805 983 DBREF 8P0C B 3 181 UNP G3M8F4 G3M8F4_RUBV 805 983 SEQADV 8P0C MET A 1 UNP G3M8F4 INITIATING METHIONINE SEQADV 8P0C ALA A 2 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C PRO A 182 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C LEU A 183 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C GLU A 184 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS A 185 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS A 186 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS A 187 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS A 188 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS A 189 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS A 190 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C MET B 1 UNP G3M8F4 INITIATING METHIONINE SEQADV 8P0C ALA B 2 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C PRO B 182 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C LEU B 183 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C GLU B 184 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS B 185 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS B 186 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS B 187 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS B 188 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS B 189 UNP G3M8F4 EXPRESSION TAG SEQADV 8P0C HIS B 190 UNP G3M8F4 EXPRESSION TAG SEQRES 1 A 190 MET ALA ASP SER ASP ILE VAL GLU SER TYR ALA ARG ALA SEQRES 2 A 190 ALA GLY PRO VAL HIS LEU ARG VAL ARG ASP ILE MET ASP SEQRES 3 A 190 PRO PRO PRO GLY CYS LYS VAL VAL VAL ASN ALA ALA ASN SEQRES 4 A 190 GLU GLY LEU LEU ALA GLY SER GLY VAL CYS GLY ALA ILE SEQRES 5 A 190 PHE ALA ASN ALA THR PRO ALA LEU ALA ALA ASP CYS ARG SEQRES 6 A 190 ARG LEU ALA PRO CYS PRO THR GLY GLU ALA VAL ALA THR SEQRES 7 A 190 PRO GLY HIS GLY CYS GLY TYR THR HIS ILE ILE HIS ALA SEQRES 8 A 190 VAL ALA PRO ARG ARG PRO ARG ASP PRO ALA ALA LEU GLU SEQRES 9 A 190 GLU GLY GLU ALA LEU LEU GLU ARG ALA TYR ARG SER ILE SEQRES 10 A 190 VAL ALA LEU ALA ALA ALA ARG ARG TRP ALA CYS VAL ALA SEQRES 11 A 190 CYS PRO LEU LEU GLY ALA GLY VAL TYR GLY TRP SER ALA SEQRES 12 A 190 ALA GLU SER LEU ARG ALA ALA LEU ALA ALA THR ARG THR SEQRES 13 A 190 GLU PRO ALA GLU ARG VAL SER LEU HIS ILE CYS HIS PRO SEQRES 14 A 190 ASP ARG ALA THR LEU THR HIS ALA SER VAL LEU VAL PRO SEQRES 15 A 190 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 190 MET ALA ASP SER ASP ILE VAL GLU SER TYR ALA ARG ALA SEQRES 2 B 190 ALA GLY PRO VAL HIS LEU ARG VAL ARG ASP ILE MET ASP SEQRES 3 B 190 PRO PRO PRO GLY CYS LYS VAL VAL VAL ASN ALA ALA ASN SEQRES 4 B 190 GLU GLY LEU LEU ALA GLY SER GLY VAL CYS GLY ALA ILE SEQRES 5 B 190 PHE ALA ASN ALA THR PRO ALA LEU ALA ALA ASP CYS ARG SEQRES 6 B 190 ARG LEU ALA PRO CYS PRO THR GLY GLU ALA VAL ALA THR SEQRES 7 B 190 PRO GLY HIS GLY CYS GLY TYR THR HIS ILE ILE HIS ALA SEQRES 8 B 190 VAL ALA PRO ARG ARG PRO ARG ASP PRO ALA ALA LEU GLU SEQRES 9 B 190 GLU GLY GLU ALA LEU LEU GLU ARG ALA TYR ARG SER ILE SEQRES 10 B 190 VAL ALA LEU ALA ALA ALA ARG ARG TRP ALA CYS VAL ALA SEQRES 11 B 190 CYS PRO LEU LEU GLY ALA GLY VAL TYR GLY TRP SER ALA SEQRES 12 B 190 ALA GLU SER LEU ARG ALA ALA LEU ALA ALA THR ARG THR SEQRES 13 B 190 GLU PRO ALA GLU ARG VAL SER LEU HIS ILE CYS HIS PRO SEQRES 14 B 190 ASP ARG ALA THR LEU THR HIS ALA SER VAL LEU VAL PRO SEQRES 15 B 190 LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *335(H2 O) HELIX 1 AA1 SER A 46 ASN A 55 1 10 HELIX 2 AA2 THR A 57 ALA A 68 1 12 HELIX 3 AA3 ALA A 101 ARG A 125 1 25 HELIX 4 AA4 SER A 142 THR A 154 1 13 HELIX 5 AA5 ASP A 170 HIS A 186 1 17 HELIX 6 AA6 SER B 46 ASN B 55 1 10 HELIX 7 AA7 PRO B 58 ALA B 68 1 11 HELIX 8 AA8 ASP B 99 ALA B 101 5 3 HELIX 9 AA9 ALA B 102 ARG B 125 1 24 HELIX 10 AB1 SER B 142 THR B 154 1 13 HELIX 11 AB2 ASP B 170 HIS B 186 1 17 SHEET 1 AA1 7 ILE A 6 TYR A 10 0 SHEET 2 AA1 7 VAL A 17 VAL A 21 -1 O LEU A 19 N VAL A 7 SHEET 3 AA1 7 SER A 163 HIS A 168 1 O ILE A 166 N ARG A 20 SHEET 4 AA1 7 CYS A 128 CYS A 131 1 N VAL A 129 O HIS A 165 SHEET 5 AA1 7 VAL A 33 ALA A 38 1 N VAL A 33 O ALA A 130 SHEET 6 AA1 7 HIS A 87 VAL A 92 1 O ILE A 89 N VAL A 34 SHEET 7 AA1 7 ALA A 75 PRO A 79 -1 N VAL A 76 O HIS A 90 SHEET 1 AA2 4 ILE B 6 TYR B 10 0 SHEET 2 AA2 4 VAL B 17 VAL B 21 -1 O LEU B 19 N VAL B 7 SHEET 3 AA2 4 SER B 163 HIS B 168 1 O ILE B 166 N ARG B 20 SHEET 4 AA2 4 CYS B 128 CYS B 131 1 N VAL B 129 O HIS B 165 SHEET 1 AA3 3 VAL B 33 ALA B 38 0 SHEET 2 AA3 3 HIS B 87 VAL B 92 1 O ILE B 89 N ASN B 36 SHEET 3 AA3 3 ALA B 75 PRO B 79 -1 N VAL B 76 O HIS B 90 CISPEP 1 ALA A 68 PRO A 69 0 -3.03 CISPEP 2 PRO A 100 ALA A 101 0 9.10 CISPEP 3 ALA B 68 PRO B 69 0 0.81 CRYST1 72.682 87.569 135.507 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013759 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007380 0.00000