HEADER IMMUNE SYSTEM 31-MAY-23 8P89 TITLE X-RAY STRUCTURE OF CARDIOTOXIC LIGHT CHAIN H3 IN COMPLEX TO TITLE 2 NEUTRALIZING NANOBODY B5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIGHT CHAIN H3; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NANOBODY B5; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 8 ORGANISM_TAXID: 9844; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AL AMYLOIDOSIS, TOXICITY, NEUTRALIZATION, NANOBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR L.BROGGINI,S.RICAGNO REVDAT 2 07-FEB-24 8P89 1 JRNL REVDAT 1 31-JAN-24 8P89 0 JRNL AUTH L.BROGGINI,M.M.BARZAGO,V.SPERANZINI,T.SCHULTE,F.SONZINI, JRNL AUTH 2 M.GIONO,M.ROMEO,P.MILANI,S.CAMINITO,G.MAZZINI,P.ROGNONI, JRNL AUTH 3 G.MERLINI,C.PAPPONE,L.ANASTASIA,M.NUVOLONE,G.PALLADINI, JRNL AUTH 4 L.DIOMEDE,S.RICAGNO JRNL TITL NANOBODIES COUNTERACT THE TOXICITY OF AN AMYLOIDOGENIC LIGHT JRNL TITL 2 CHAIN BY STABILIZING A PARTIALLY OPEN DIMERIC CONFORMATION. JRNL REF J.MOL.BIOL. V. 435 68320 2023 JRNL REFN ESSN 1089-8638 JRNL PMID 37865287 JRNL DOI 10.1016/J.JMB.2023.168320 REMARK 2 REMARK 2 RESOLUTION. 3.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 124.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 63.0 REMARK 3 NUMBER OF REFLECTIONS : 14056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4905 REMARK 3 ANGLE : 0.743 6740 REMARK 3 CHIRALITY : 0.049 771 REMARK 3 PLANARITY : 0.006 885 REMARK 3 DIHEDRAL : 4.802 3464 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8P89 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1292130804. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14056 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.180 REMARK 200 RESOLUTION RANGE LOW (A) : 124.945 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.55 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE, 0.1M TRIS-HCL REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 72.60750 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 122.59200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.29600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 72.60750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 183.88800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 183.88800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 72.60750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 61.29600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 72.60750 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 122.59200 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 72.60750 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 122.59200 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 72.60750 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 183.88800 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 61.29600 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.60750 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 61.29600 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 183.88800 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 72.60750 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 72.60750 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 122.59200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -151.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 409 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 417 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 414 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 309 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 1 REMARK 465 SER A 2 REMARK 465 THR A 213 REMARK 465 GLU A 214 REMARK 465 CYS A 215 REMARK 465 SER A 216 REMARK 465 GLN B 1 REMARK 465 SER B 2 REMARK 465 GLU B 214 REMARK 465 CYS B 215 REMARK 465 SER B 216 REMARK 465 ILE D 102 REMARK 465 GLY D 103 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 3 CG1 CG2 REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 SER A 57 OG REMARK 470 ARG A 67 CZ NH1 NH2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 ASN A 132 CG OD1 ND2 REMARK 470 LYS A 160 CG CD CE NZ REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 LYS A 193 CG CD CE NZ REMARK 470 LYS A 208 CD CE NZ REMARK 470 GLN C 1 CG CD OE1 NE2 REMARK 470 LYS C 43 CE NZ REMARK 470 LYS C 52 CG CD CE NZ REMARK 470 LYS C 65 CG CD CE NZ REMARK 470 LYS C 76 CE NZ REMARK 470 LYS C 87 CG CD CE NZ REMARK 470 GLU C 89 CG CD OE1 OE2 REMARK 470 ILE C 102 CG1 CG2 CD1 REMARK 470 SER C 105 OG REMARK 470 GLN B 16 CG CD OE1 NE2 REMARK 470 ARG B 17 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 470 LEU B 40 CG CD1 CD2 REMARK 470 LYS B 46 CG CD CE NZ REMARK 470 SER B 57 OG REMARK 470 ASP B 61 CG OD1 OD2 REMARK 470 GLN B 80 CG CD OE1 NE2 REMARK 470 LEU B 96 CG CD1 CD2 REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 LYS B 114 CG CD CE NZ REMARK 470 GLU B 127 CG CD OE1 OE2 REMARK 470 GLN B 130 CG CD OE1 NE2 REMARK 470 LYS B 133 CG CD CE NZ REMARK 470 LYS B 153 CG CD CE NZ REMARK 470 ASP B 155 CG OD1 OD2 REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 LYS B 170 CG CD CE NZ REMARK 470 LYS B 175 CG CD CE NZ REMARK 470 GLU B 187 CG CD OE1 OE2 REMARK 470 LYS B 190 CG CD CE NZ REMARK 470 LYS B 193 CD CE NZ REMARK 470 TYR B 195 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 207 CG CD OE1 OE2 REMARK 470 LYS B 208 CG CD CE NZ REMARK 470 GLN D 1 CG CD OE1 NE2 REMARK 470 LYS D 43 CG CD CE NZ REMARK 470 LYS D 52 CG CD CE NZ REMARK 470 LYS D 65 CG CD CE NZ REMARK 470 LYS D 76 CG CD CE NZ REMARK 470 LYS D 87 CG CD CE NZ REMARK 470 GLU D 89 CG CD OE1 OE2 REMARK 470 ARG D 101 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 28 -82.36 -103.34 REMARK 500 ASN A 32 -179.46 172.77 REMARK 500 ASN A 52 -63.61 67.67 REMARK 500 ASP A 155 -119.53 57.83 REMARK 500 VAL C 48 -73.53 -110.78 REMARK 500 ARG C 101 -158.65 -87.05 REMARK 500 ASN B 28 -88.75 -115.70 REMARK 500 ASN B 52 -68.70 69.35 REMARK 500 ALA B 85 -177.25 -170.16 REMARK 500 ASP B 155 -119.35 57.26 REMARK 500 VAL D 48 -72.60 -112.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 416 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A 417 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH A 418 DISTANCE = 7.55 ANGSTROMS REMARK 525 HOH A 419 DISTANCE = 8.66 ANGSTROMS REMARK 525 HOH A 420 DISTANCE = 8.92 ANGSTROMS REMARK 525 HOH A 421 DISTANCE = 9.08 ANGSTROMS REMARK 525 HOH A 422 DISTANCE = 9.18 ANGSTROMS REMARK 525 HOH A 423 DISTANCE = 9.87 ANGSTROMS REMARK 525 HOH A 424 DISTANCE = 10.53 ANGSTROMS REMARK 525 HOH C 317 DISTANCE = 8.79 ANGSTROMS REMARK 525 HOH C 318 DISTANCE = 8.80 ANGSTROMS REMARK 525 HOH C 319 DISTANCE = 8.83 ANGSTROMS REMARK 525 HOH C 320 DISTANCE = 9.75 ANGSTROMS REMARK 525 HOH B 423 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 424 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 425 DISTANCE = 7.55 ANGSTROMS REMARK 525 HOH B 426 DISTANCE = 7.63 ANGSTROMS REMARK 525 HOH B 427 DISTANCE = 7.73 ANGSTROMS REMARK 525 HOH B 428 DISTANCE = 8.74 ANGSTROMS REMARK 525 HOH B 429 DISTANCE = 9.44 ANGSTROMS REMARK 525 HOH B 430 DISTANCE = 9.66 ANGSTROMS REMARK 525 HOH B 431 DISTANCE = 11.24 ANGSTROMS REMARK 525 HOH B 432 DISTANCE = 15.29 ANGSTROMS REMARK 525 HOH B 433 DISTANCE = 16.12 ANGSTROMS REMARK 525 HOH D 307 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH D 308 DISTANCE = 7.68 ANGSTROMS REMARK 525 HOH D 309 DISTANCE = 8.66 ANGSTROMS REMARK 525 HOH D 310 DISTANCE = 15.41 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8P88 RELATED DB: PDB DBREF 8P89 A 1 216 PDB 8P89 8P89 1 216 DBREF 8P89 C 1 120 PDB 8P89 8P89 1 120 DBREF 8P89 B 1 216 PDB 8P89 8P89 1 216 DBREF 8P89 D 1 120 PDB 8P89 8P89 1 120 SEQRES 1 A 216 GLN SER VAL LEU THR GLN PRO PRO SER THR SER GLY THR SEQRES 2 A 216 PRO GLY GLN ARG VAL THR ILE SER CYS SER GLY SER SER SEQRES 3 A 216 SER ASN ILE GLU THR ASN THR VAL ASN TRP TYR GLN GLN SEQRES 4 A 216 LEU PRO GLY THR ALA PRO LYS LEU VAL MET HIS THR ASN SEQRES 5 A 216 ASN GLN ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SEQRES 6 A 216 SER ARG SER GLY THR SER ALA SER LEU ALA ILE GLY GLY SEQRES 7 A 216 LEU GLN SER GLU ASP GLU ALA ASP TYR PHE CYS ALA ALA SEQRES 8 A 216 TRP ASP ASP ASN LEU ASN GLY VAL ILE PHE GLY GLY GLY SEQRES 9 A 216 THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SEQRES 10 A 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 A 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 A 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 A 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 A 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 A 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS LYS SER TYR SEQRES 16 A 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 A 216 THR VAL ALA PRO THR GLU CYS SER SEQRES 1 C 120 GLN VAL GLN LEU VAL GLU SER GLY GLY ALA LEU VAL GLU SEQRES 2 C 120 PRO GLY GLY SER LEU ARG LEU SER CYS VAL ALA SER GLY SEQRES 3 C 120 PHE PRO PHE ASN GLU TYR ASP MET SER TRP VAL ARG GLN SEQRES 4 C 120 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER THR ILE LYS SEQRES 5 C 120 SER ASP GLY ALA TYR THR TYR TYR GLY ASP ASN VAL LYS SEQRES 6 C 120 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 C 120 LEU TYR LEU GLN MET ASN SER LEU LYS SER GLU ASP THR SEQRES 8 C 120 GLY VAL TYR TYR CYS ALA LYS GLU ALA ARG ILE GLY VAL SEQRES 9 C 120 SER GLY THR TYR ASP TYR TRP GLY GLN GLY THR GLN VAL SEQRES 10 C 120 THR VAL SER SEQRES 1 B 216 GLN SER VAL LEU THR GLN PRO PRO SER THR SER GLY THR SEQRES 2 B 216 PRO GLY GLN ARG VAL THR ILE SER CYS SER GLY SER SER SEQRES 3 B 216 SER ASN ILE GLU THR ASN THR VAL ASN TRP TYR GLN GLN SEQRES 4 B 216 LEU PRO GLY THR ALA PRO LYS LEU VAL MET HIS THR ASN SEQRES 5 B 216 ASN GLN ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SEQRES 6 B 216 SER ARG SER GLY THR SER ALA SER LEU ALA ILE GLY GLY SEQRES 7 B 216 LEU GLN SER GLU ASP GLU ALA ASP TYR PHE CYS ALA ALA SEQRES 8 B 216 TRP ASP ASP ASN LEU ASN GLY VAL ILE PHE GLY GLY GLY SEQRES 9 B 216 THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SEQRES 10 B 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 B 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 B 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 B 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 B 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 B 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS LYS SER TYR SEQRES 16 B 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 B 216 THR VAL ALA PRO THR GLU CYS SER SEQRES 1 D 120 GLN VAL GLN LEU VAL GLU SER GLY GLY ALA LEU VAL GLU SEQRES 2 D 120 PRO GLY GLY SER LEU ARG LEU SER CYS VAL ALA SER GLY SEQRES 3 D 120 PHE PRO PHE ASN GLU TYR ASP MET SER TRP VAL ARG GLN SEQRES 4 D 120 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER THR ILE LYS SEQRES 5 D 120 SER ASP GLY ALA TYR THR TYR TYR GLY ASP ASN VAL LYS SEQRES 6 D 120 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 D 120 LEU TYR LEU GLN MET ASN SER LEU LYS SER GLU ASP THR SEQRES 8 D 120 GLY VAL TYR TYR CYS ALA LYS GLU ALA ARG ILE GLY VAL SEQRES 9 D 120 SER GLY THR TYR ASP TYR TRP GLY GLN GLY THR GLN VAL SEQRES 10 D 120 THR VAL SER HET CL A 301 1 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET CL C 201 1 HET CL C 202 1 HET CL C 203 1 HET CL C 204 1 HET CL B 301 1 HET CL B 302 1 HET CL B 303 1 HET CL B 304 1 HET CL B 305 1 HET CL D 201 1 HET CL D 202 1 HETNAM CL CHLORIDE ION FORMUL 5 CL 15(CL 1-) FORMUL 20 HOH *87(H2 O) HELIX 1 AA1 GLN A 80 GLU A 84 5 5 HELIX 2 AA2 SER A 125 ALA A 131 1 7 HELIX 3 AA3 THR A 185 HIS A 192 1 8 HELIX 4 AA4 PRO C 28 TYR C 32 5 5 HELIX 5 AA5 ASN C 74 LYS C 76 5 3 HELIX 6 AA6 LYS C 87 THR C 91 5 5 HELIX 7 AA7 GLN B 80 GLU B 84 5 5 HELIX 8 AA8 SER B 125 ALA B 131 1 7 HELIX 9 AA9 THR B 185 HIS B 192 1 8 HELIX 10 AB1 PRO D 28 TYR D 32 5 5 HELIX 11 AB2 ASN D 74 LYS D 76 5 3 HELIX 12 AB3 LYS D 87 THR D 91 5 5 SHEET 1 AA1 5 SER A 9 GLY A 12 0 SHEET 2 AA1 5 THR A 105 VAL A 109 1 O LYS A 106 N THR A 10 SHEET 3 AA1 5 ASP A 86 ASP A 93 -1 N TYR A 87 O THR A 105 SHEET 4 AA1 5 VAL A 34 GLN A 39 -1 N GLN A 39 O ASP A 86 SHEET 5 AA1 5 LYS A 46 MET A 49 -1 O MET A 49 N TRP A 36 SHEET 1 AA2 4 SER A 9 GLY A 12 0 SHEET 2 AA2 4 THR A 105 VAL A 109 1 O LYS A 106 N THR A 10 SHEET 3 AA2 4 ASP A 86 ASP A 93 -1 N TYR A 87 O THR A 105 SHEET 4 AA2 4 GLY A 98 PHE A 101 -1 O GLY A 98 N ASP A 93 SHEET 1 AA3 3 VAL A 18 SER A 23 0 SHEET 2 AA3 3 SER A 71 ILE A 76 -1 O ALA A 72 N CYS A 22 SHEET 3 AA3 3 SER A 64 SER A 68 -1 N SER A 64 O ALA A 75 SHEET 1 AA4 4 SER A 118 PHE A 122 0 SHEET 2 AA4 4 ALA A 134 PHE A 143 -1 O VAL A 137 N PHE A 122 SHEET 3 AA4 4 TYR A 176 LEU A 184 -1 O LEU A 182 N LEU A 136 SHEET 4 AA4 4 VAL A 163 THR A 165 -1 N GLU A 164 O TYR A 181 SHEET 1 AA5 4 SER A 118 PHE A 122 0 SHEET 2 AA5 4 ALA A 134 PHE A 143 -1 O VAL A 137 N PHE A 122 SHEET 3 AA5 4 TYR A 176 LEU A 184 -1 O LEU A 182 N LEU A 136 SHEET 4 AA5 4 SER A 169 LYS A 170 -1 N SER A 169 O ALA A 177 SHEET 1 AA6 4 SER A 157 PRO A 158 0 SHEET 2 AA6 4 THR A 149 ALA A 154 -1 N ALA A 154 O SER A 157 SHEET 3 AA6 4 TYR A 195 HIS A 201 -1 O GLN A 198 N ALA A 151 SHEET 4 AA6 4 SER A 204 VAL A 210 -1 O VAL A 206 N VAL A 199 SHEET 1 AA7 4 GLN C 3 SER C 7 0 SHEET 2 AA7 4 LEU C 18 SER C 25 -1 O VAL C 23 N VAL C 5 SHEET 3 AA7 4 THR C 78 MET C 83 -1 O LEU C 79 N CYS C 22 SHEET 4 AA7 4 PHE C 68 ASP C 73 -1 N THR C 69 O GLN C 82 SHEET 1 AA8 6 LEU C 11 VAL C 12 0 SHEET 2 AA8 6 THR C 115 VAL C 119 1 O THR C 118 N VAL C 12 SHEET 3 AA8 6 GLY C 92 ALA C 97 -1 N GLY C 92 O VAL C 117 SHEET 4 AA8 6 MET C 34 GLN C 39 -1 N VAL C 37 O TYR C 95 SHEET 5 AA8 6 LEU C 45 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 AA8 6 THR C 58 TYR C 60 -1 O TYR C 59 N THR C 50 SHEET 1 AA9 5 SER B 9 GLY B 12 0 SHEET 2 AA9 5 THR B 105 VAL B 109 1 O LYS B 106 N THR B 10 SHEET 3 AA9 5 ASP B 86 ASP B 93 -1 N TYR B 87 O THR B 105 SHEET 4 AA9 5 VAL B 34 GLN B 39 -1 N ASN B 35 O ALA B 90 SHEET 5 AA9 5 PRO B 45 MET B 49 -1 O MET B 49 N TRP B 36 SHEET 1 AB1 4 SER B 9 GLY B 12 0 SHEET 2 AB1 4 THR B 105 VAL B 109 1 O LYS B 106 N THR B 10 SHEET 3 AB1 4 ASP B 86 ASP B 93 -1 N TYR B 87 O THR B 105 SHEET 4 AB1 4 GLY B 98 PHE B 101 -1 O GLY B 98 N ASP B 93 SHEET 1 AB2 3 VAL B 18 SER B 23 0 SHEET 2 AB2 3 SER B 71 ILE B 76 -1 O ALA B 72 N CYS B 22 SHEET 3 AB2 3 SER B 64 SER B 68 -1 N SER B 68 O SER B 71 SHEET 1 AB3 4 THR B 120 PHE B 122 0 SHEET 2 AB3 4 ALA B 134 PHE B 143 -1 O VAL B 137 N PHE B 122 SHEET 3 AB3 4 TYR B 176 LEU B 184 -1 O SER B 180 N CYS B 138 SHEET 4 AB3 4 VAL B 163 THR B 165 -1 N GLU B 164 O TYR B 181 SHEET 1 AB4 4 THR B 120 PHE B 122 0 SHEET 2 AB4 4 ALA B 134 PHE B 143 -1 O VAL B 137 N PHE B 122 SHEET 3 AB4 4 TYR B 176 LEU B 184 -1 O SER B 180 N CYS B 138 SHEET 4 AB4 4 SER B 169 LYS B 170 -1 N SER B 169 O ALA B 177 SHEET 1 AB5 4 SER B 157 VAL B 159 0 SHEET 2 AB5 4 THR B 149 ALA B 154 -1 N ALA B 154 O SER B 157 SHEET 3 AB5 4 TYR B 195 HIS B 201 -1 O GLN B 198 N ALA B 151 SHEET 4 AB5 4 SER B 204 VAL B 210 -1 O SER B 204 N HIS B 201 SHEET 1 AB6 4 GLN D 3 SER D 7 0 SHEET 2 AB6 4 LEU D 18 SER D 25 -1 O SER D 25 N GLN D 3 SHEET 3 AB6 4 THR D 78 MET D 83 -1 O LEU D 79 N CYS D 22 SHEET 4 AB6 4 PHE D 68 ASP D 73 -1 N THR D 69 O GLN D 82 SHEET 1 AB7 6 LEU D 11 VAL D 12 0 SHEET 2 AB7 6 THR D 115 VAL D 119 1 O THR D 118 N VAL D 12 SHEET 3 AB7 6 GLY D 92 ALA D 97 -1 N GLY D 92 O VAL D 117 SHEET 4 AB7 6 MET D 34 GLN D 39 -1 N VAL D 37 O TYR D 95 SHEET 5 AB7 6 LEU D 45 ILE D 51 -1 O GLU D 46 N ARG D 38 SHEET 6 AB7 6 THR D 58 TYR D 60 -1 O TYR D 59 N THR D 50 SSBOND 1 CYS A 22 CYS A 89 1555 1555 2.03 SSBOND 2 CYS A 138 CYS A 197 1555 1555 2.03 SSBOND 3 CYS C 22 CYS C 96 1555 1555 2.03 SSBOND 4 CYS B 22 CYS B 89 1555 1555 2.03 SSBOND 5 CYS B 138 CYS B 197 1555 1555 2.04 SSBOND 6 CYS D 22 CYS D 96 1555 1555 2.03 CISPEP 1 TYR A 144 PRO A 145 0 0.55 CISPEP 2 TYR B 144 PRO B 145 0 1.12 CRYST1 145.215 145.215 245.184 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006886 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006886 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004079 0.00000