HEADER IMMUNE SYSTEM 02-JUN-23 8P8R TITLE EX VIVO YM1 CRYSTAL STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE-LIKE PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-N-ACETYLHEXOSAMINIDASE YM1,CHITINASE-3-LIKE PROTEIN 3, COMPND 5 ECF-L,EOSINOPHIL CHEMOTACTIC CYTOKINE,SECRETED PROTEIN YM1; COMPND 6 EC: 3.2.1.52; COMPND 7 OTHER_DETAILS: THE SEQUENCE CORRESPONDS TO UNIPROT ID O35744. COMPND 8 RESIDUES 1 TO 21 CORRESPOND TO THE NATIVE SECRETION SIGNAL. YM1 COMPND 9 CRYSTALS WERE HARVESTED FROM THE BAL FLUID OF VIABLE MOTHEATEN MICE COMPND 10 (MEV/MEV MICE). SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: MEV/MEV; SOURCE 6 TISSUE: LUNG BAL FLUID KEYWDS YM1, AUTOCRYSTALLIZATION, CHIL3, CHITINASE-LIKE PROTEIN, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.H.G.VERSCHUEREN,K.VERSTRAETE,I.HEYNDRICKX,U.SMOLE,H.AEGERTER, AUTHOR 2 S.N.SAVVIDES,B.N.LAMBRECHT REVDAT 2 24-JAN-24 8P8R 1 JRNL REVDAT 1 17-JAN-24 8P8R 0 JRNL AUTH I.HEYNDRICKX,K.DESWARTE,K.VERSTRAETE,K.H.G.VERSCHUEREN, JRNL AUTH 2 U.SMOLE,H.AEGERTER,A.DANSERCOER,H.HAMMAD,S.N.SAVVIDES, JRNL AUTH 3 B.N.LAMBRECHT JRNL TITL YM1 PROTEIN CRYSTALS PROMOTE TYPE 2 IMMUNITY. JRNL REF ELIFE V. 12 2024 JRNL REFN ESSN 2050-084X JRNL PMID 38194250 JRNL DOI 10.7554/ELIFE.90676 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH I.HEYNDRICKX,K.DESWARTE,K.VERSTRAETE,K.VERSCHUEREN,U.SMOLE, REMARK 1 AUTH 2 H.AEGERTER,A.DANSERCOER,H.HAMMAD,S.SAVVIDES,B.LAMBRECHT REMARK 1 TITL YM1 PROTEIN CRYSTALS PROMOTE TYPE 2 IMMUNITY REMARK 1 REF ELIFE 2023 REMARK 1 REFN ESSN 2050-084X REMARK 1 DOI 10.7554/ELIFE.90676.2 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 66944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3335 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.43 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.99 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1339 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2263 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1272 REMARK 3 BIN R VALUE (WORKING SET) : 0.2224 REMARK 3 BIN FREE R VALUE : 0.3005 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2957 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 163 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.90930 REMARK 3 B22 (A**2) : 0.91150 REMARK 3 B33 (A**2) : 2.99780 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.87870 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.180 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.061 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.063 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.062 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.063 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3061 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4166 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1020 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 515 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3061 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 385 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3702 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.98 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.03 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.99 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|24 } REMARK 3 ORIGIN FOR THE GROUP (A): 31.0713 2.7170 8.2696 REMARK 3 T TENSOR REMARK 3 T11: 0.0214 T22: 0.0025 REMARK 3 T33: 0.0128 T12: -0.0120 REMARK 3 T13: -0.0133 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.6508 L22: 0.8465 REMARK 3 L33: 3.8461 L12: -0.3963 REMARK 3 L13: 0.2014 L23: 1.1598 REMARK 3 S TENSOR REMARK 3 S11: 0.1033 S12: 0.0325 S13: -0.0917 REMARK 3 S21: -0.0305 S22: -0.0566 S23: 0.1369 REMARK 3 S31: 0.0375 S32: -0.3283 S33: -0.0468 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|25 - A|127 } REMARK 3 ORIGIN FOR THE GROUP (A): 32.5121 18.2507 9.1887 REMARK 3 T TENSOR REMARK 3 T11: -0.0054 T22: -0.0236 REMARK 3 T33: -0.0182 T12: -0.0026 REMARK 3 T13: 0.0069 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.4655 L22: 0.4828 REMARK 3 L33: 0.4118 L12: 0.0747 REMARK 3 L13: -0.0253 L23: -0.0720 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: 0.0243 S13: 0.0186 REMARK 3 S21: -0.0988 S22: 0.0417 S23: 0.0596 REMARK 3 S31: -0.0142 S32: -0.0530 S33: -0.0006 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|128 - A|166 } REMARK 3 ORIGIN FOR THE GROUP (A): 35.9313 26.3289 18.6950 REMARK 3 T TENSOR REMARK 3 T11: 0.0104 T22: -0.0145 REMARK 3 T33: -0.0232 T12: 0.0060 REMARK 3 T13: 0.0028 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.1722 L22: 0.4866 REMARK 3 L33: 0.8691 L12: -0.4077 REMARK 3 L13: -0.4216 L23: 0.3538 REMARK 3 S TENSOR REMARK 3 S11: -0.0550 S12: -0.0515 S13: 0.1289 REMARK 3 S21: 0.0438 S22: 0.0131 S23: 0.0279 REMARK 3 S31: -0.1054 S32: -0.0622 S33: 0.0420 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|167 - A|195 } REMARK 3 ORIGIN FOR THE GROUP (A): 46.9569 15.6199 19.9441 REMARK 3 T TENSOR REMARK 3 T11: 0.0000 T22: -0.0056 REMARK 3 T33: -0.0122 T12: 0.0074 REMARK 3 T13: 0.0073 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.2003 L22: 0.9414 REMARK 3 L33: 0.5039 L12: -0.4034 REMARK 3 L13: -0.3335 L23: 0.4227 REMARK 3 S TENSOR REMARK 3 S11: -0.0351 S12: -0.0036 S13: -0.0197 REMARK 3 S21: 0.0278 S22: 0.0057 S23: -0.0023 REMARK 3 S31: -0.0275 S32: 0.0323 S33: 0.0294 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|196 - A|213 } REMARK 3 ORIGIN FOR THE GROUP (A): 56.8303 -1.7867 17.6671 REMARK 3 T TENSOR REMARK 3 T11: -0.0147 T22: -0.0123 REMARK 3 T33: 0.0283 T12: 0.0029 REMARK 3 T13: 0.0261 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.7188 L22: 1.6412 REMARK 3 L33: 0.1903 L12: -0.1900 REMARK 3 L13: 0.6573 L23: 0.1629 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: 0.1054 S13: -0.0095 REMARK 3 S21: -0.0872 S22: 0.0090 S23: -0.2188 REMARK 3 S31: -0.0031 S32: 0.0671 S33: -0.0244 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|214 - A|290 } REMARK 3 ORIGIN FOR THE GROUP (A): 49.2439 -0.8656 14.0124 REMARK 3 T TENSOR REMARK 3 T11: -0.0056 T22: -0.0048 REMARK 3 T33: 0.0013 T12: 0.0001 REMARK 3 T13: 0.0170 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.3983 L22: 0.5771 REMARK 3 L33: 0.4605 L12: -0.2230 REMARK 3 L13: -0.0270 L23: 0.0512 REMARK 3 S TENSOR REMARK 3 S11: 0.0091 S12: 0.0325 S13: 0.0159 REMARK 3 S21: -0.0013 S22: -0.0114 S23: -0.0289 REMARK 3 S31: 0.0408 S32: 0.0248 S33: 0.0023 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { A|291 - A|373 } REMARK 3 ORIGIN FOR THE GROUP (A): 39.5824 -5.3547 19.2668 REMARK 3 T TENSOR REMARK 3 T11: 0.0094 T22: -0.0086 REMARK 3 T33: 0.0048 T12: -0.0114 REMARK 3 T13: 0.0134 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.4715 L22: 0.4692 REMARK 3 L33: 0.4284 L12: -0.3053 REMARK 3 L13: -0.0282 L23: -0.0699 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: -0.0066 S13: -0.0585 REMARK 3 S21: 0.0222 S22: 0.0232 S23: 0.0405 REMARK 3 S31: 0.0668 S32: -0.0535 S33: 0.0040 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8P8R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1292130876. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 26, 2018 REMARK 200 BUILT=20180808 REMARK 200 DATA SCALING SOFTWARE : AIMLESS V. 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66956 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 59.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.330 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER V. 2.8.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SPONTANEOUS IN VIVO CRYSTALLISATION. REMARK 280 SINGLE EX VIVO YM1 CRYSTALS WERE HARVESTED FROM THE BAL FLUID OF REMARK 280 MEV/MEV MICE USING MOUNTED CRYO-LOOPS., IN CELL, TEMPERATURE 310K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.12400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 LYS A -18 REMARK 465 LEU A -17 REMARK 465 ILE A -16 REMARK 465 LEU A -15 REMARK 465 VAL A -14 REMARK 465 THR A -13 REMARK 465 GLY A -12 REMARK 465 LEU A -11 REMARK 465 ALA A -10 REMARK 465 ILE A -9 REMARK 465 LEU A -8 REMARK 465 LEU A -7 REMARK 465 ASN A -6 REMARK 465 VAL A -5 REMARK 465 GLN A -4 REMARK 465 LEU A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 SER A 0 REMARK 465 LYS A 374 REMARK 465 GLY A 375 REMARK 465 PRO A 376 REMARK 465 TYR A 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 245 41.04 -99.89 REMARK 500 ARG A 354 -178.07 72.08 REMARK 500 REMARK 500 REMARK: NULL DBREF 8P8R A -20 377 UNP O35744 CHIL3_MOUSE 1 398 SEQRES 1 A 398 MET ALA LYS LEU ILE LEU VAL THR GLY LEU ALA ILE LEU SEQRES 2 A 398 LEU ASN VAL GLN LEU GLY SER SER TYR GLN LEU MET CYS SEQRES 3 A 398 TYR TYR THR SER TRP ALA LYS ASP ARG PRO ILE GLU GLY SEQRES 4 A 398 SER PHE LYS PRO GLY ASN ILE ASP PRO CYS LEU CYS THR SEQRES 5 A 398 HIS LEU ILE TYR ALA PHE ALA GLY MET GLN ASN ASN GLU SEQRES 6 A 398 ILE THR TYR THR HIS GLU GLN ASP LEU ARG ASP TYR GLU SEQRES 7 A 398 ALA LEU ASN GLY LEU LYS ASP LYS ASN THR GLU LEU LYS SEQRES 8 A 398 THR LEU LEU ALA ILE GLY GLY TRP LYS PHE GLY PRO ALA SEQRES 9 A 398 PRO PHE SER ALA MET VAL SER THR PRO GLN ASN ARG GLN SEQRES 10 A 398 ILE PHE ILE GLN SER VAL ILE ARG PHE LEU ARG GLN TYR SEQRES 11 A 398 ASN PHE ASP GLY LEU ASN LEU ASP TRP GLN TYR PRO GLY SEQRES 12 A 398 SER ARG GLY SER PRO PRO LYS ASP LYS HIS LEU PHE SER SEQRES 13 A 398 VAL LEU VAL LYS GLU MET ARG LYS ALA PHE GLU GLU GLU SEQRES 14 A 398 SER VAL GLU LYS ASP ILE PRO ARG LEU LEU LEU THR SER SEQRES 15 A 398 THR GLY ALA GLY ILE ILE ASP VAL ILE LYS SER GLY TYR SEQRES 16 A 398 LYS ILE PRO GLU LEU SER GLN SER LEU ASP TYR ILE GLN SEQRES 17 A 398 VAL MET THR TYR ASP LEU HIS ASP PRO LYS ASP GLY TYR SEQRES 18 A 398 THR GLY GLU ASN SER PRO LEU TYR LYS SER PRO TYR ASP SEQRES 19 A 398 ILE GLY LYS SER ALA ASP LEU ASN VAL ASP SER ILE ILE SEQRES 20 A 398 SER TYR TRP LYS ASP HIS GLY ALA ALA SER GLU LYS LEU SEQRES 21 A 398 ILE VAL GLY PHE PRO ALA TYR GLY HIS THR PHE ILE LEU SEQRES 22 A 398 SER ASP PRO SER LYS THR GLY ILE GLY ALA PRO THR ILE SEQRES 23 A 398 SER THR GLY PRO PRO GLY LYS TYR THR ASP GLU SER GLY SEQRES 24 A 398 LEU LEU ALA TYR TYR GLU VAL CYS THR PHE LEU ASN GLU SEQRES 25 A 398 GLY ALA THR GLU VAL TRP ASP ALA PRO GLN GLU VAL PRO SEQRES 26 A 398 TYR ALA TYR GLN GLY ASN GLU TRP VAL GLY TYR ASP ASN SEQRES 27 A 398 VAL ARG SER PHE LYS LEU LYS ALA GLN TRP LEU LYS ASP SEQRES 28 A 398 ASN ASN LEU GLY GLY ALA VAL VAL TRP PRO LEU ASP MET SEQRES 29 A 398 ASP ASP PHE SER GLY SER PHE CYS HIS GLN ARG HIS PHE SEQRES 30 A 398 PRO LEU THR SER THR LEU LYS GLY ASP LEU ASN ILE HIS SEQRES 31 A 398 SER ALA SER CYS LYS GLY PRO TYR HET EDO A 400 10 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO C2 H6 O2 FORMUL 3 HOH *163(H2 O) HELIX 1 AA1 TRP A 10 ARG A 14 5 5 HELIX 2 AA2 PRO A 15 SER A 19 5 5 HELIX 3 AA3 LYS A 21 ILE A 25 5 5 HELIX 4 AA4 GLU A 50 LEU A 62 1 13 HELIX 5 AA5 LYS A 63 LYS A 65 5 3 HELIX 6 AA6 PRO A 82 SER A 90 1 9 HELIX 7 AA7 THR A 91 ASN A 110 1 20 HELIX 8 AA8 PRO A 128 ASP A 153 1 26 HELIX 9 AA9 ILE A 166 TYR A 174 1 9 HELIX 10 AB1 LYS A 175 LEU A 183 1 9 HELIX 11 AB2 ASP A 195 GLY A 199 5 5 HELIX 12 AB3 ILE A 214 LEU A 220 5 7 HELIX 13 AB4 ASN A 221 HIS A 232 1 12 HELIX 14 AB5 ALA A 235 GLU A 237 5 3 HELIX 15 AB6 TYR A 282 GLU A 291 1 10 HELIX 16 AB7 ASN A 317 ASN A 331 1 15 HELIX 17 AB8 PRO A 340 ASP A 344 5 5 HELIX 18 AB9 PHE A 356 LEU A 366 1 11 SHEET 1 AA110 GLU A 44 THR A 46 0 SHEET 2 AA110 HIS A 32 GLN A 41 -1 N GLY A 39 O THR A 46 SHEET 3 AA110 LYS A 70 GLY A 76 1 O ALA A 74 N ALA A 38 SHEET 4 AA110 GLY A 113 ASP A 117 1 O ASN A 115 N LEU A 73 SHEET 5 AA110 LEU A 158 GLY A 163 1 O THR A 160 N LEU A 116 SHEET 6 AA110 TYR A 185 VAL A 188 1 O GLN A 187 N SER A 161 SHEET 7 AA110 LEU A 239 PRO A 244 1 O ILE A 240 N ILE A 186 SHEET 8 AA110 GLY A 335 TRP A 339 1 O VAL A 337 N PHE A 243 SHEET 9 AA110 GLN A 2 THR A 8 1 N MET A 4 O ALA A 336 SHEET 10 AA110 HIS A 32 GLN A 41 1 O ILE A 34 N TYR A 7 SHEET 1 AA2 3 THR A 264 THR A 267 0 SHEET 2 AA2 3 TYR A 246 LEU A 252 -1 N ILE A 251 O ILE A 265 SHEET 3 AA2 3 LEU A 279 ALA A 281 -1 O LEU A 280 N GLY A 247 SHEET 1 AA3 5 THR A 264 THR A 267 0 SHEET 2 AA3 5 TYR A 246 LEU A 252 -1 N ILE A 251 O ILE A 265 SHEET 3 AA3 5 GLU A 311 GLY A 314 -1 O TRP A 312 N PHE A 250 SHEET 4 AA3 5 VAL A 303 GLN A 308 -1 N ALA A 306 O VAL A 313 SHEET 5 AA3 5 THR A 294 ASP A 298 -1 N VAL A 296 O TYR A 305 SSBOND 1 CYS A 5 CYS A 30 1555 1555 2.04 SSBOND 2 CYS A 28 CYS A 373 1555 1555 2.05 SSBOND 3 CYS A 286 CYS A 351 1555 1555 2.07 CISPEP 1 ALA A 36 PHE A 37 0 0.85 CISPEP 2 GLN A 119 TYR A 120 0 1.31 CISPEP 3 TRP A 339 PRO A 340 0 -14.83 CRYST1 50.518 60.248 60.116 90.00 94.48 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019795 0.000000 0.001551 0.00000 SCALE2 0.000000 0.016598 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016685 0.00000