HEADER TRANSFERASE 05-JUN-23 8P9B TITLE CRYSTAL STRUCTURE OF MNK2-D228G IN COMPLEX WITH TINODASERTIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAP KINASE-INTERACTING SERINE/THREONINE-PROTEIN KINASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAP KINASE SIGNAL-INTEGRATING KINASE 2,MAPK SIGNAL- COMPND 5 INTEGRATING KINASE 2,MNK2; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MKNK2, GPRK7, MNK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MNK2, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.P.TURNBULL,V.SABIN,C.BELL,M.WATSON REVDAT 1 12-JUN-24 8P9B 0 JRNL AUTH V.SABIN,A.P.TURNBULL,C.BELL,M.WATSON JRNL TITL CRYSTAL STRUCTURE OF MNK2-D228G IN COMPLEX WITH TINODASERTIB JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0411 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 14721 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.013 REMARK 3 FREE R VALUE TEST SET COUNT : 738 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1055 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3650 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2015 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.35700 REMARK 3 B12 (A**2) : 0.05500 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.326 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.266 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.210 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.773 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2097 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1916 ; 0.002 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2845 ; 1.358 ; 1.662 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4386 ; 0.542 ; 1.588 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 260 ; 7.074 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 9 ; 6.976 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;16.464 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 315 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2429 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 477 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 421 ; 0.228 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 58 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1055 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 40 ; 0.124 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1049 ; 4.709 ; 6.443 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1049 ; 4.707 ; 6.443 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1306 ; 6.728 ;11.555 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1307 ; 6.725 ;11.558 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1048 ; 6.245 ; 6.610 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1049 ; 6.242 ; 6.611 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1539 ; 8.579 ;12.052 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1540 ; 8.576 ;12.052 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): -10.8287 73.9554 2.7716 REMARK 3 T TENSOR REMARK 3 T11: 0.0585 T22: 0.0811 REMARK 3 T33: 0.2060 T12: 0.0064 REMARK 3 T13: -0.0785 T23: -0.0731 REMARK 3 L TENSOR REMARK 3 L11: 4.2638 L22: 3.3298 REMARK 3 L33: 2.5001 L12: 0.7804 REMARK 3 L13: 1.3396 L23: 1.3433 REMARK 3 S TENSOR REMARK 3 S11: -0.2038 S12: -0.0606 S13: 0.6105 REMARK 3 S21: -0.1720 S22: -0.1502 S23: 0.1042 REMARK 3 S31: -0.3608 S32: 0.0819 S33: 0.3541 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8P9B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. REMARK 100 THE DEPOSITION ID IS D_1292130946. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14740 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 56.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% (W/V) POLYACRYLIC ACID 5100, 2% REMARK 280 (V/V) 2-METHYL-2,4-PENTANEDIOL, 100MM HEPES, PH 8.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.66667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.83333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.83333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.66667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 70 REMARK 465 GLY A 228 REMARK 465 LEU A 229 REMARK 465 GLY A 230 REMARK 465 SER A 231 REMARK 465 GLY A 232 REMARK 465 ILE A 233 REMARK 465 LYS A 234 REMARK 465 LEU A 235 REMARK 465 ASN A 236 REMARK 465 GLY A 237 REMARK 465 ASP A 238 REMARK 465 CYS A 239 REMARK 465 SER A 240 REMARK 465 PRO A 241 REMARK 465 ILE A 242 REMARK 465 SER A 243 REMARK 465 THR A 244 REMARK 465 PRO A 245 REMARK 465 GLU A 246 REMARK 465 LEU A 247 REMARK 465 LEU A 248 REMARK 465 THR A 249 REMARK 465 PRO A 250 REMARK 465 CYS A 251 REMARK 465 GLY A 252 REMARK 465 GLY A 300 REMARK 465 SER A 301 REMARK 465 ASP A 302 REMARK 465 CYS A 303 REMARK 465 GLY A 304 REMARK 465 TRP A 305 REMARK 465 ASP A 306 REMARK 465 ARG A 307 REMARK 465 GLY A 308 REMARK 465 GLU A 309 REMARK 465 ALA A 310 REMARK 465 GLY A 370 REMARK 465 CYS A 371 REMARK 465 ALA A 372 REMARK 465 PRO A 373 REMARK 465 GLU A 374 REMARK 465 ASN A 375 REMARK 465 THR A 376 REMARK 465 LEU A 377 REMARK 465 PRO A 378 REMARK 465 THR A 379 REMARK 465 PRO A 380 REMARK 465 MET A 381 REMARK 465 VAL A 382 REMARK 465 LEU A 383 REMARK 465 GLN A 384 REMARK 465 ARG A 385 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 71 OG REMARK 470 ARG A 78 CD NE CZ NH1 NH2 REMARK 470 ASP A 81 CG OD1 OD2 REMARK 470 GLN A 84 CD OE1 NE2 REMARK 470 GLU A 87 CD OE1 OE2 REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 HIS A 95 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 97 CD NE CZ NH1 NH2 REMARK 470 GLN A 118 CG CD OE1 NE2 REMARK 470 HIS A 121 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 122 CG1 CG2 CD1 REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 128 CD NE CZ NH1 NH2 REMARK 470 GLU A 152 CG CD OE1 OE2 REMARK 470 ARG A 163 CD NE CZ NH1 NH2 REMARK 470 SER A 253 OG REMARK 470 GLU A 263 CD OE1 OE2 REMARK 470 PHE A 265 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 266 OG REMARK 470 GLU A 267 CG CD OE1 OE2 REMARK 470 ARG A 298 CD NE CZ NH1 NH2 REMARK 470 GLN A 315 CD OE1 NE2 REMARK 470 ASN A 316 CG OD1 ND2 REMARK 470 MET A 317 SD CE REMARK 470 GLU A 320 CD OE1 OE2 REMARK 470 GLN A 323 CG CD OE1 NE2 REMARK 470 GLU A 324 CD OE1 OE2 REMARK 470 LYS A 326 CG CD CE NZ REMARK 470 GLU A 328 CD OE1 OE2 REMARK 470 LYS A 332 CD CE NZ REMARK 470 LYS A 354 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 88 -177.80 -69.25 REMARK 500 HIS A 95 -74.22 -58.58 REMARK 500 PRO A 119 132.08 -37.57 REMARK 500 ARG A 175 -44.08 73.23 REMARK 500 ARG A 204 -12.90 80.13 REMARK 500 ASP A 205 39.04 -141.01 REMARK 500 GLN A 218 134.37 -174.70 REMARK 500 ASP A 226 48.24 73.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 299 SG REMARK 620 2 CYS A 311 SG 125.5 REMARK 620 3 CYS A 314 SG 103.9 130.1 REMARK 620 N 1 2 DBREF 8P9B A 72 385 UNP Q9HBH9 MKNK2_HUMAN 72 385 SEQADV 8P9B GLY A 70 UNP Q9HBH9 EXPRESSION TAG SEQADV 8P9B SER A 71 UNP Q9HBH9 EXPRESSION TAG SEQADV 8P9B GLY A 228 UNP Q9HBH9 ASP 228 ENGINEERED MUTATION SEQRES 1 A 316 GLY SER THR ASP SER PHE SER GLY ARG PHE GLU ASP VAL SEQRES 2 A 316 TYR GLN LEU GLN GLU ASP VAL LEU GLY GLU GLY ALA HIS SEQRES 3 A 316 ALA ARG VAL GLN THR CYS ILE ASN LEU ILE THR SER GLN SEQRES 4 A 316 GLU TYR ALA VAL LYS ILE ILE GLU LYS GLN PRO GLY HIS SEQRES 5 A 316 ILE ARG SER ARG VAL PHE ARG GLU VAL GLU MET LEU TYR SEQRES 6 A 316 GLN CYS GLN GLY HIS ARG ASN VAL LEU GLU LEU ILE GLU SEQRES 7 A 316 PHE PHE GLU GLU GLU ASP ARG PHE TYR LEU VAL PHE GLU SEQRES 8 A 316 LYS MET ARG GLY GLY SER ILE LEU SER HIS ILE HIS LYS SEQRES 9 A 316 ARG ARG HIS PHE ASN GLU LEU GLU ALA SER VAL VAL VAL SEQRES 10 A 316 GLN ASP VAL ALA SER ALA LEU ASP PHE LEU HIS ASN LYS SEQRES 11 A 316 GLY ILE ALA HIS ARG ASP LEU LYS PRO GLU ASN ILE LEU SEQRES 12 A 316 CYS GLU HIS PRO ASN GLN VAL SER PRO VAL LYS ILE CYS SEQRES 13 A 316 ASP PHE GLY LEU GLY SER GLY ILE LYS LEU ASN GLY ASP SEQRES 14 A 316 CYS SER PRO ILE SER THR PRO GLU LEU LEU THR PRO CYS SEQRES 15 A 316 GLY SER ALA GLU TYR MET ALA PRO GLU VAL VAL GLU ALA SEQRES 16 A 316 PHE SER GLU GLU ALA SER ILE TYR ASP LYS ARG CYS ASP SEQRES 17 A 316 LEU TRP SER LEU GLY VAL ILE LEU TYR ILE LEU LEU SER SEQRES 18 A 316 GLY TYR PRO PRO PHE VAL GLY ARG CYS GLY SER ASP CYS SEQRES 19 A 316 GLY TRP ASP ARG GLY GLU ALA CYS PRO ALA CYS GLN ASN SEQRES 20 A 316 MET LEU PHE GLU SER ILE GLN GLU GLY LYS TYR GLU PHE SEQRES 21 A 316 PRO ASP LYS ASP TRP ALA HIS ILE SER CYS ALA ALA LYS SEQRES 22 A 316 ASP LEU ILE SER LYS LEU LEU VAL ARG ASP ALA LYS GLN SEQRES 23 A 316 ARG LEU SER ALA ALA GLN VAL LEU GLN HIS PRO TRP VAL SEQRES 24 A 316 GLN GLY CYS ALA PRO GLU ASN THR LEU PRO THR PRO MET SEQRES 25 A 316 VAL LEU GLN ARG HET ZN A 401 1 HET X8K A 402 31 HETNAM ZN ZINC ION HETNAM X8K 4-[6-(4-MORPHOLIN-4-YLCARBONYLPHENYL)IMIDAZO[1,2- HETNAM 2 X8K A]PYRIDIN-3-YL]BENZENECARBONITRILE FORMUL 2 ZN ZN 2+ FORMUL 3 X8K C25 H20 N4 O2 HELIX 1 AA1 ARG A 78 VAL A 82 1 5 HELIX 2 AA2 ARG A 123 CYS A 136 1 14 HELIX 3 AA3 SER A 166 ARG A 175 1 10 HELIX 4 AA4 ASN A 178 ASN A 198 1 21 HELIX 5 AA5 LYS A 207 GLU A 209 5 3 HELIX 6 AA6 SER A 253 MET A 257 5 5 HELIX 7 AA7 ALA A 258 ALA A 264 1 7 HELIX 8 AA8 SER A 266 ASP A 273 1 8 HELIX 9 AA9 ARG A 275 GLY A 291 1 17 HELIX 10 AB1 PRO A 312 GLY A 325 1 14 HELIX 11 AB2 PRO A 330 ALA A 335 1 6 HELIX 12 AB3 SER A 338 LYS A 347 1 10 HELIX 13 AB4 SER A 358 HIS A 365 1 8 SHEET 1 AA1 3 TYR A 83 LEU A 85 0 SHEET 2 AA1 3 ALA A 96 ASN A 103 -1 O ILE A 102 N GLN A 84 SHEET 3 AA1 3 GLY A 91 GLU A 92 -1 N GLY A 91 O VAL A 98 SHEET 1 AA2 5 TYR A 83 LEU A 85 0 SHEET 2 AA2 5 ALA A 96 ASN A 103 -1 O ILE A 102 N GLN A 84 SHEET 3 AA2 5 GLU A 109 GLU A 116 -1 O VAL A 112 N GLN A 99 SHEET 4 AA2 5 ARG A 154 GLU A 160 -1 O PHE A 155 N ILE A 115 SHEET 5 AA2 5 LEU A 145 GLU A 151 -1 N ILE A 146 O VAL A 158 SHEET 1 AA3 2 ILE A 211 CYS A 213 0 SHEET 2 AA3 2 VAL A 222 ILE A 224 -1 O LYS A 223 N LEU A 212 LINK SG CYS A 299 ZN ZN A 401 1555 1555 2.36 LINK SG CYS A 311 ZN ZN A 401 1555 1555 2.36 LINK SG CYS A 314 ZN ZN A 401 1555 1555 2.36 CISPEP 1 SER A 220 PRO A 221 0 -2.34 CRYST1 105.910 105.910 71.500 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009442 0.005451 0.000000 0.00000 SCALE2 0.000000 0.010903 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013986 0.00000