HEADER ANTIMICROBIAL PROTEIN 18-JUN-23 8PGV TITLE CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE VIM1 WITH 3396 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE VIM-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CLASS B CARBAPENEMASE VIM-1,METALLO-BETA-LACTAMASE,METALLO- COMPND 5 BETA-LACTAMASE VIM-1,METALLOBETA-LACTAMASE,SUBCLASS B1 METALLO-BETA- COMPND 6 LACTAMASE VIM-1,VIM-1,VIM-1 METALLO-BETA-LACTAMASE,VIM-1 PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLAVIM, BLAVIM-1, CAZ10_38240, CAZ10_38245; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: C41 KEYWDS COMPLEX, METALLO-BETA-LACTAMASE, INHIBITOR, ZINC, INDOLE CARBOXYLATE, KEYWDS 2 ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.CALVOPINA,J.BREM,A.J.M.FARLEY,M.D.ALLEN,C.J.SCHOFIELD REVDAT 1 10-JUL-24 8PGV 0 JRNL AUTH K.CALVOPINA,J.BREM,A.J.M.FARLEY,M.D.ALLEN,C.J.SCHOFIELD JRNL TITL CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE VIM1 WITH JRNL TITL 2 3396 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 59950 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.119 REMARK 3 R VALUE (WORKING SET) : 0.118 REMARK 3 FREE R VALUE : 0.140 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 3110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1400 - 3.4500 1.00 2682 181 0.1488 0.1611 REMARK 3 2 3.4400 - 2.7300 1.00 2690 131 0.1356 0.1417 REMARK 3 3 2.7300 - 2.3900 1.00 2663 166 0.1194 0.1301 REMARK 3 4 2.3900 - 2.1700 1.00 2680 138 0.1144 0.1339 REMARK 3 5 2.1700 - 2.0200 1.00 2651 142 0.1100 0.1349 REMARK 3 6 2.0200 - 1.9000 1.00 2661 143 0.1049 0.1274 REMARK 3 7 1.9000 - 1.8000 1.00 2689 114 0.1054 0.1154 REMARK 3 8 1.8000 - 1.7200 1.00 2637 167 0.1039 0.1258 REMARK 3 9 1.7200 - 1.6600 1.00 2639 146 0.1002 0.1426 REMARK 3 10 1.6600 - 1.6000 1.00 2680 118 0.0979 0.1413 REMARK 3 11 1.6000 - 1.5500 1.00 2669 122 0.0941 0.1275 REMARK 3 12 1.5500 - 1.5100 0.99 2655 132 0.0869 0.1220 REMARK 3 13 1.5100 - 1.4700 0.99 2616 130 0.0887 0.1176 REMARK 3 14 1.4700 - 1.4300 0.99 2616 169 0.0928 0.1361 REMARK 3 15 1.4300 - 1.4000 0.99 2639 137 0.0955 0.1299 REMARK 3 16 1.4000 - 1.3700 0.99 2614 144 0.1001 0.1650 REMARK 3 17 1.3700 - 1.3400 0.99 2601 154 0.1011 0.1336 REMARK 3 18 1.3400 - 1.3200 0.98 2590 160 0.1010 0.1493 REMARK 3 19 1.3200 - 1.2900 0.97 2566 150 0.1047 0.1507 REMARK 3 20 1.2900 - 1.2700 0.93 2432 127 0.1131 0.1453 REMARK 3 21 1.2700 - 1.2500 0.84 2243 127 0.1214 0.1720 REMARK 3 22 1.2500 - 1.2300 0.74 1927 112 0.1280 0.1757 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.080 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.258 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2106 REMARK 3 ANGLE : 1.725 2926 REMARK 3 CHIRALITY : 0.108 321 REMARK 3 PLANARITY : 0.019 391 REMARK 3 DIHEDRAL : 26.962 357 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8PGV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1292131281. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8/5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97965 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59971 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.230 REMARK 200 RESOLUTION RANGE LOW (A) : 34.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.33000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2M AMMONIUM PHOSPHATE 0.1M TRISHCL, REMARK 280 PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.02500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 LYS A 3 REMARK 465 VAL A 4 REMARK 465 ILE A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 LEU A 8 REMARK 465 LEU A 9 REMARK 465 VAL A 10 REMARK 465 TYR A 11 REMARK 465 MET A 12 REMARK 465 THR A 13 REMARK 465 ALA A 14 REMARK 465 SER A 15 REMARK 465 VAL A 16 REMARK 465 MET A 17 REMARK 465 ALA A 18 REMARK 465 VAL A 19 REMARK 465 ALA A 20 REMARK 465 SER A 21 REMARK 465 PRO A 22 REMARK 465 LEU A 23 REMARK 465 ALA A 24 REMARK 465 HIS A 25 REMARK 465 SER A 26 REMARK 465 GLY A 27 REMARK 465 GLU A 28 REMARK 465 PRO A 29 REMARK 465 ARG A 262 REMARK 465 SER A 263 REMARK 465 VAL A 264 REMARK 465 ALA A 265 REMARK 465 GLU A 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 166 O HOH A 403 1.25 REMARK 500 HG SER A 161 O HOH A 408 1.60 REMARK 500 O ASN A 261 O HOH A 402 2.03 REMARK 500 NH2 ARG A 166 O HOH A 403 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 146 CD GLU A 146 OE1 -0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 127 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 127 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP A 247 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 84 144.88 73.59 REMARK 500 TRP A 87 63.53 69.08 REMARK 500 ALA A 178 -106.68 -152.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 45 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 724 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 725 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A 726 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 727 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A 728 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 729 DISTANCE = 6.71 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 114 NE2 REMARK 620 2 HIS A 116 ND1 96.5 REMARK 620 3 HIS A 179 NE2 100.3 109.2 REMARK 620 4 HOH A 495 O 107.4 127.8 111.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 118 OD2 REMARK 620 2 CYS A 198 SG 98.6 REMARK 620 3 HIS A 240 NE2 82.5 103.1 REMARK 620 4 YRT A 303 O27 159.9 101.4 91.6 REMARK 620 5 HOH A 495 O 81.2 114.3 140.9 91.7 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7AFY RELATED DB: PDB DBREF 8PGV A 1 266 UNP Q9XAY4 Q9XAY4_PSEAI 1 266 SEQRES 1 A 266 MET LEU LYS VAL ILE SER SER LEU LEU VAL TYR MET THR SEQRES 2 A 266 ALA SER VAL MET ALA VAL ALA SER PRO LEU ALA HIS SER SEQRES 3 A 266 GLY GLU PRO SER GLY GLU TYR PRO THR VAL ASN GLU ILE SEQRES 4 A 266 PRO VAL GLY GLU VAL ARG LEU TYR GLN ILE ALA ASP GLY SEQRES 5 A 266 VAL TRP SER HIS ILE ALA THR GLN SER PHE ASP GLY ALA SEQRES 6 A 266 VAL TYR PRO SER ASN GLY LEU ILE VAL ARG ASP GLY ASP SEQRES 7 A 266 GLU LEU LEU LEU ILE ASP THR ALA TRP GLY ALA LYS ASN SEQRES 8 A 266 THR ALA ALA LEU LEU ALA GLU ILE GLU LYS GLN ILE GLY SEQRES 9 A 266 LEU PRO VAL THR ARG ALA VAL SER THR HIS PHE HIS ASP SEQRES 10 A 266 ASP ARG VAL GLY GLY VAL ASP VAL LEU ARG ALA ALA GLY SEQRES 11 A 266 VAL ALA THR TYR ALA SER PRO SER THR ARG ARG LEU ALA SEQRES 12 A 266 GLU ALA GLU GLY ASN GLU ILE PRO THR HIS SER LEU GLU SEQRES 13 A 266 GLY LEU SER SER SER GLY ASP ALA VAL ARG PHE GLY PRO SEQRES 14 A 266 VAL GLU LEU PHE TYR PRO GLY ALA ALA HIS SER THR ASP SEQRES 15 A 266 ASN LEU VAL VAL TYR VAL PRO SER ALA ASN VAL LEU TYR SEQRES 16 A 266 GLY GLY CYS ALA VAL HIS GLU LEU SER SER THR SER ALA SEQRES 17 A 266 GLY ASN VAL ALA ASP ALA ASP LEU ALA GLU TRP PRO THR SEQRES 18 A 266 SER VAL GLU ARG ILE GLN LYS HIS TYR PRO GLU ALA GLU SEQRES 19 A 266 VAL VAL ILE PRO GLY HIS GLY LEU PRO GLY GLY LEU ASP SEQRES 20 A 266 LEU LEU GLN HIS THR ALA ASN VAL VAL LYS ALA HIS LYS SEQRES 21 A 266 ASN ARG SER VAL ALA GLU HET ZN A 301 1 HET ZN A 302 1 HET YRT A 303 136 HETNAM ZN ZINC ION HETNAM YRT 7-[(1~{S})-1-[2-(AMINOMETHYL)-6-OXIDANYLIDENE-5-OXA-7- HETNAM 2 YRT AZASPIRO[3.4]OCTAN-7-YL]ETHYL]-3-[3-FLUORANYL-4- HETNAM 3 YRT (OXETAN-3-YLSULFONYLAMINO)PHENYL]-1~{H}-INDOLE-2- HETNAM 4 YRT CARBOXYLIC ACID FORMUL 2 ZN 2(ZN 2+) FORMUL 4 YRT C27 H29 F N4 O7 S FORMUL 5 HOH *329(H2 O) HELIX 1 AA1 THR A 35 ILE A 39 5 5 HELIX 2 AA2 GLY A 88 ILE A 103 1 16 HELIX 3 AA3 HIS A 116 GLY A 121 1 6 HELIX 4 AA4 GLY A 122 ALA A 129 1 8 HELIX 5 AA5 SER A 136 GLY A 147 1 12 HELIX 6 AA6 CYS A 198 VAL A 200 5 3 HELIX 7 AA7 GLU A 218 TYR A 230 1 13 HELIX 8 AA8 LEU A 246 ASN A 261 1 16 SHEET 1 AA1 7 ARG A 45 ALA A 50 0 SHEET 2 AA1 7 VAL A 53 PHE A 62 -1 O ILE A 57 N ARG A 45 SHEET 3 AA1 7 ALA A 65 ASP A 76 -1 O ILE A 73 N TRP A 54 SHEET 4 AA1 7 GLU A 79 ILE A 83 -1 O GLU A 79 N ASP A 76 SHEET 5 AA1 7 VAL A 107 VAL A 111 1 O ARG A 109 N LEU A 82 SHEET 6 AA1 7 ALA A 132 ALA A 135 1 O ALA A 132 N ALA A 110 SHEET 7 AA1 7 HIS A 153 SER A 154 1 O HIS A 153 N THR A 133 SHEET 1 AA2 5 ALA A 164 PHE A 167 0 SHEET 2 AA2 5 VAL A 170 PHE A 173 -1 O LEU A 172 N VAL A 165 SHEET 3 AA2 5 VAL A 185 VAL A 188 -1 O VAL A 185 N PHE A 173 SHEET 4 AA2 5 VAL A 193 GLY A 197 -1 O TYR A 195 N VAL A 186 SHEET 5 AA2 5 VAL A 235 PRO A 238 1 O VAL A 235 N LEU A 194 LINK NE2 HIS A 114 ZN A ZN A 301 1555 1555 2.13 LINK ND1 HIS A 116 ZN A ZN A 301 1555 1555 2.05 LINK OD2 ASP A 118 ZN A ZN A 302 1555 1555 2.36 LINK NE2 HIS A 179 ZN A ZN A 301 1555 1555 2.04 LINK SG CYS A 198 ZN A ZN A 302 1555 1555 2.28 LINK NE2 HIS A 240 ZN A ZN A 302 1555 1555 2.14 LINK ZN A ZN A 301 O HOH A 495 1555 1555 1.85 LINK ZN A ZN A 302 O27AYRT A 303 1555 1555 2.21 LINK ZN A ZN A 302 O HOH A 495 1555 1555 2.03 CRYST1 39.530 68.050 40.300 90.00 93.81 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025297 0.000000 0.001685 0.00000 SCALE2 0.000000 0.014695 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024869 0.00000 CONECT 1532 3852 CONECT 1566 3852 CONECT 1596 3853 CONECT 2544 3852 CONECT 2845 3853 CONECT 3531 3853 CONECT 3852 1532 1566 2544 4084 CONECT 3853 1596 2845 3531 3926 CONECT 3853 4084 CONECT 3854 3856 3898 3934 CONECT 3855 3857 3899 3935 CONECT 3856 3854 3900 3936 CONECT 3857 3855 3901 3937 CONECT 3858 3900 3932 3938 CONECT 3859 3901 3933 3939 CONECT 3860 3932 CONECT 3861 3933 CONECT 3862 3864 3902 3932 3940 CONECT 3863 3865 3903 3933 3941 CONECT 3864 3862 3922 3942 3944 CONECT 3865 3863 3923 3943 3945 CONECT 3866 3900 3904 3912 CONECT 3867 3901 3905 3913 CONECT 3868 3870 3896 3914 CONECT 3869 3871 3897 3915 CONECT 3870 3868 3924 3926 CONECT 3871 3869 3925 3927 CONECT 3872 3908 3916 3946 3948 CONECT 3873 3909 3917 3947 3949 CONECT 3874 3876 3878 3910 3950 CONECT 3875 3877 3879 3911 3951 CONECT 3876 3874 3918 3952 3954 CONECT 3877 3875 3919 3953 3955 CONECT 3878 3874 3908 3956 3958 CONECT 3879 3875 3909 3957 3959 CONECT 3880 3916 3928 3930 CONECT 3881 3917 3929 3931 CONECT 3882 3884 3960 3962 3964 CONECT 3883 3885 3961 3963 3965 CONECT 3884 3882 3886 3916 3966 CONECT 3885 3883 3887 3917 3967 CONECT 3886 3884 3888 3906 CONECT 3887 3885 3889 3907 CONECT 3888 3886 3890 3968 CONECT 3889 3887 3891 3969 CONECT 3890 3888 3892 3970 CONECT 3891 3889 3893 3971 CONECT 3892 3890 3894 3972 CONECT 3893 3891 3895 3973 CONECT 3894 3892 3896 3906 CONECT 3895 3893 3897 3907 CONECT 3896 3868 3894 3898 CONECT 3897 3869 3895 3899 CONECT 3898 3854 3896 3904 CONECT 3899 3855 3897 3905 CONECT 3900 3856 3858 3866 CONECT 3901 3857 3859 3867 CONECT 3902 3862 3922 3974 3976 CONECT 3903 3863 3923 3975 3977 CONECT 3904 3866 3898 3978 CONECT 3905 3867 3899 3979 CONECT 3906 3886 3894 3914 CONECT 3907 3887 3895 3915 CONECT 3908 3872 3878 3910 3928 CONECT 3909 3873 3879 3911 3929 CONECT 3910 3874 3908 3980 3982 CONECT 3911 3875 3909 3981 3983 CONECT 3912 3866 CONECT 3913 3867 CONECT 3914 3868 3906 3984 CONECT 3915 3869 3907 3985 CONECT 3916 3872 3880 3884 CONECT 3917 3873 3881 3885 CONECT 3918 3876 3986 CONECT 3919 3877 3987 CONECT 3920 3932 CONECT 3921 3933 CONECT 3922 3864 3902 CONECT 3923 3865 3903 CONECT 3924 3870 CONECT 3925 3871 CONECT 3926 3853 3870 CONECT 3927 3871 CONECT 3928 3880 3908 CONECT 3929 3881 3909 CONECT 3930 3880 CONECT 3931 3881 CONECT 3932 3858 3860 3862 3920 CONECT 3933 3859 3861 3863 3921 CONECT 3934 3854 CONECT 3935 3855 CONECT 3936 3856 CONECT 3937 3857 CONECT 3938 3858 CONECT 3939 3859 CONECT 3940 3862 CONECT 3941 3863 CONECT 3942 3864 CONECT 3943 3865 CONECT 3944 3864 CONECT 3945 3865 CONECT 3946 3872 CONECT 3947 3873 CONECT 3948 3872 CONECT 3949 3873 CONECT 3950 3874 CONECT 3951 3875 CONECT 3952 3876 CONECT 3953 3877 CONECT 3954 3876 CONECT 3955 3877 CONECT 3956 3878 CONECT 3957 3879 CONECT 3958 3878 CONECT 3959 3879 CONECT 3960 3882 CONECT 3961 3883 CONECT 3962 3882 CONECT 3963 3883 CONECT 3964 3882 CONECT 3965 3883 CONECT 3966 3884 CONECT 3967 3885 CONECT 3968 3888 CONECT 3969 3889 CONECT 3970 3890 CONECT 3971 3891 CONECT 3972 3892 CONECT 3973 3893 CONECT 3974 3902 CONECT 3975 3903 CONECT 3976 3902 CONECT 3977 3903 CONECT 3978 3904 CONECT 3979 3905 CONECT 3980 3910 CONECT 3981 3911 CONECT 3982 3910 CONECT 3983 3911 CONECT 3984 3914 CONECT 3985 3915 CONECT 3986 3918 CONECT 3987 3919 CONECT 4084 3852 3853 MASTER 374 0 3 8 12 0 0 6 2102 1 144 21 END