HEADER VIRAL PROTEIN 19-JUN-23 8PHI TITLE CRYSTAL STRUCTURE OF PREFUSION-STABILIZED RSV F VARIANT DS-CAV1 IN TITLE 2 COMPLEX WITH LONAFARNIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUSION GLYCOPROTEIN F0; COMPND 3 CHAIN: F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN RESPIRATORY SYNCYTIAL VIRUS A2; SOURCE 3 ORGANISM_TAXID: 11259; SOURCE 4 STRAIN: STRAIN A2; SOURCE 5 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7227 KEYWDS RSV F GLYCOPROTEIN, INHIBITOR, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.RAJAK,T.KREY REVDAT 1 21-FEB-24 8PHI 0 JRNL AUTH S.M.SAKE,X.ZHANG,M.K.RAJAK,M.URBANEK-QUAING,A.CARPENTIER, JRNL AUTH 2 A.P.GUNESCH,C.GRETHE,A.MATTHAEI,J.RUCKERT,M.GALLOUX, JRNL AUTH 3 T.LARCHER,R.LE GOFFIC,F.HONTONNOU,A.K.CHATTERJEE,K.JOHNSON, JRNL AUTH 4 K.MORWOOD,K.ROX,W.A.M.ELGAHER,J.HUANG,M.WETZKE,G.HANSEN, JRNL AUTH 5 N.FISCHER,J.F.ELEOUET,M.A.RAMEIX-WELTI,A.K.H.HIRSCH, JRNL AUTH 6 E.HEROLD,M.EMPTING,C.LAUBER,T.F.SCHULZ,T.KREY,S.HAID, JRNL AUTH 7 T.PIETSCHMANN JRNL TITL DRUG REPURPOSING SCREEN IDENTIFIES LONAFARNIB AS RESPIRATORY JRNL TITL 2 SYNCYTIAL VIRUS FUSION PROTEIN INHIBITOR. JRNL REF NAT COMMUN V. 15 1173 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38332002 JRNL DOI 10.1038/S41467-024-45241-Y REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 (17-FEB-2023) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.560 REMARK 3 FREE R VALUE TEST SET COUNT : 1174 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.31 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.29 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 515 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.4224 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 496 REMARK 3 BIN R VALUE (WORKING SET) : 0.4267 REMARK 3 BIN FREE R VALUE : 0.3285 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.69 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3452 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 177 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -15.72150 REMARK 3 B22 (A**2) : -15.72150 REMARK 3 B33 (A**2) : 31.44300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.290 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.257 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.194 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.264 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.198 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.899 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.891 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3584 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4867 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1261 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 604 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3584 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 498 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3146 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.98 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.11 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.68 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8PHI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1292131243. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91983 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JAN 10, 2022 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51465 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.289 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 26.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.20.1-4487 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000-20%, CACL2-400MM, & TRISHCL REMARK 280 PH-8 100MM, PH 8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.32000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.58816 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.99333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 44.32000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 25.58816 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 64.99333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 44.32000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 25.58816 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.99333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.17633 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 129.98667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 51.17633 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 129.98667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 51.17633 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 129.98667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN F 70 REMARK 465 GLY F 71 REMARK 465 THR F 72 REMARK 465 THR F 100 REMARK 465 PRO F 101 REMARK 465 ALA F 102 REMARK 465 THR F 103 REMARK 465 ASN F 104 REMARK 465 ASN F 105 REMARK 465 ARG F 106 REMARK 465 ALA F 107 REMARK 465 ARG F 108 REMARK 465 ARG F 109 REMARK 465 GLU F 110 REMARK 465 LEU F 111 REMARK 465 PRO F 112 REMARK 465 ARG F 113 REMARK 465 PHE F 114 REMARK 465 MET F 115 REMARK 465 ASN F 116 REMARK 465 TYR F 117 REMARK 465 THR F 118 REMARK 465 LEU F 119 REMARK 465 ASN F 120 REMARK 465 ASN F 121 REMARK 465 ALA F 122 REMARK 465 LYS F 123 REMARK 465 LYS F 124 REMARK 465 THR F 125 REMARK 465 ASN F 126 REMARK 465 VAL F 127 REMARK 465 THR F 128 REMARK 465 LEU F 129 REMARK 465 SER F 130 REMARK 465 LYS F 131 REMARK 465 LYS F 132 REMARK 465 ARG F 133 REMARK 465 LYS F 134 REMARK 465 ARG F 135 REMARK 465 ARG F 136 REMARK 465 TYR F 519 REMARK 465 ILE F 520 REMARK 465 PRO F 521 REMARK 465 GLU F 522 REMARK 465 ALA F 523 REMARK 465 PRO F 524 REMARK 465 ARG F 525 REMARK 465 ASP F 526 REMARK 465 GLY F 527 REMARK 465 GLN F 528 REMARK 465 ALA F 529 REMARK 465 TYR F 530 REMARK 465 VAL F 531 REMARK 465 ARG F 532 REMARK 465 LYS F 533 REMARK 465 ASP F 534 REMARK 465 GLY F 535 REMARK 465 GLU F 536 REMARK 465 TRP F 537 REMARK 465 VAL F 538 REMARK 465 LEU F 539 REMARK 465 LEU F 540 REMARK 465 SER F 541 REMARK 465 THR F 542 REMARK 465 PHE F 543 REMARK 465 LEU F 544 REMARK 465 GLY F 545 REMARK 465 GLY F 546 REMARK 465 LEU F 547 REMARK 465 VAL F 548 REMARK 465 PRO F 549 REMARK 465 ARG F 550 REMARK 465 GLY F 551 REMARK 465 SER F 552 REMARK 465 SER F 553 REMARK 465 ALA F 554 REMARK 465 TRP F 555 REMARK 465 SER F 556 REMARK 465 HIS F 557 REMARK 465 PRO F 558 REMARK 465 GLN F 559 REMARK 465 PHE F 560 REMARK 465 GLU F 561 REMARK 465 LYS F 562 REMARK 465 GLY F 563 REMARK 465 GLY F 564 REMARK 465 GLY F 565 REMARK 465 SER F 566 REMARK 465 GLY F 567 REMARK 465 GLY F 568 REMARK 465 GLY F 569 REMARK 465 SER F 570 REMARK 465 GLY F 571 REMARK 465 GLY F 572 REMARK 465 GLY F 573 REMARK 465 SER F 574 REMARK 465 TRP F 575 REMARK 465 SER F 576 REMARK 465 HIS F 577 REMARK 465 PRO F 578 REMARK 465 GLN F 579 REMARK 465 PHE F 580 REMARK 465 GLU F 581 REMARK 465 LYS F 582 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN F 26 O CG CD OE1 NE2 REMARK 470 ASN F 27 CG OD1 ND2 REMARK 470 LYS F 65 CG CD CE NZ REMARK 470 GLU F 66 CG CD OE1 OE2 REMARK 470 LYS F 68 CG CD CE NZ REMARK 470 LYS F 176 NZ REMARK 470 LYS F 209 CE NZ REMARK 470 ILE F 214 CG1 CG2 CD1 REMARK 470 ASN F 216 CG OD1 ND2 REMARK 470 LYS F 327 CG CD CE NZ REMARK 470 GLU F 328 CG CD OE1 OE2 REMARK 470 LYS F 419 CG CD CE NZ REMARK 470 GLU F 463 CD OE1 OE2 REMARK 470 GLU F 497 CD OE1 OE2 REMARK 470 PHE F 505 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN F 27 59.63 -145.64 REMARK 500 ALA F 47 88.43 -156.22 REMARK 500 LYS F 65 -58.82 -139.90 REMARK 500 LYS F 68 38.75 -94.88 REMARK 500 SER F 215 -55.06 69.56 REMARK 500 ASN F 345 113.05 -160.56 REMARK 500 SER F 362 -121.00 58.93 REMARK 500 ASP F 486 41.56 -140.93 REMARK 500 ASP F 489 46.26 -89.68 REMARK 500 REMARK 500 REMARK: NULL DBREF 8PHI F 26 513 UNP W8RJF9 W8RJF9_HRSV 26 513 SEQADV 8PHI GLU F 66 UNP W8RJF9 LYS 66 CONFLICT SEQADV 8PHI CYS F 155 UNP W8RJF9 SER 155 CONFLICT SEQADV 8PHI PHE F 190 UNP W8RJF9 SER 190 CONFLICT SEQADV 8PHI LEU F 207 UNP W8RJF9 VAL 207 CONFLICT SEQADV 8PHI CYS F 290 UNP W8RJF9 SER 290 CONFLICT SEQADV 8PHI SER F 514 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ALA F 515 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ILE F 516 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 517 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 518 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI TYR F 519 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ILE F 520 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PRO F 521 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLU F 522 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ALA F 523 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PRO F 524 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ARG F 525 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ASP F 526 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 527 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLN F 528 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ALA F 529 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI TYR F 530 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI VAL F 531 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ARG F 532 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI LYS F 533 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ASP F 534 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 535 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLU F 536 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI TRP F 537 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI VAL F 538 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI LEU F 539 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI LEU F 540 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 541 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI THR F 542 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PHE F 543 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI LEU F 544 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 545 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 546 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI LEU F 547 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI VAL F 548 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PRO F 549 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ARG F 550 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 551 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 552 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 553 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI ALA F 554 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI TRP F 555 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 556 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI HIS F 557 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PRO F 558 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLN F 559 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PHE F 560 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLU F 561 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI LYS F 562 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 563 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 564 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 565 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 566 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 567 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 568 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 569 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 570 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 571 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 572 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLY F 573 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 574 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI TRP F 575 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI SER F 576 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI HIS F 577 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PRO F 578 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLN F 579 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI PHE F 580 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI GLU F 581 UNP W8RJF9 EXPRESSION TAG SEQADV 8PHI LYS F 582 UNP W8RJF9 EXPRESSION TAG SEQRES 1 F 557 GLN ASN ILE THR GLU GLU PHE TYR GLN SER THR CYS SER SEQRES 2 F 557 ALA VAL SER LYS GLY TYR LEU SER ALA LEU ARG THR GLY SEQRES 3 F 557 TRP TYR THR SER VAL ILE THR ILE GLU LEU SER ASN ILE SEQRES 4 F 557 LYS GLU ASN LYS CYS ASN GLY THR ASP ALA LYS VAL LYS SEQRES 5 F 557 LEU ILE LYS GLN GLU LEU ASP LYS TYR LYS ASN ALA VAL SEQRES 6 F 557 THR GLU LEU GLN LEU LEU MET GLN SER THR PRO ALA THR SEQRES 7 F 557 ASN ASN ARG ALA ARG ARG GLU LEU PRO ARG PHE MET ASN SEQRES 8 F 557 TYR THR LEU ASN ASN ALA LYS LYS THR ASN VAL THR LEU SEQRES 9 F 557 SER LYS LYS ARG LYS ARG ARG PHE LEU GLY PHE LEU LEU SEQRES 10 F 557 GLY VAL GLY SER ALA ILE ALA SER GLY VAL ALA VAL CYS SEQRES 11 F 557 LYS VAL LEU HIS LEU GLU GLY GLU VAL ASN LYS ILE LYS SEQRES 12 F 557 SER ALA LEU LEU SER THR ASN LYS ALA VAL VAL SER LEU SEQRES 13 F 557 SER ASN GLY VAL SER VAL LEU THR PHE LYS VAL LEU ASP SEQRES 14 F 557 LEU LYS ASN TYR ILE ASP LYS GLN LEU LEU PRO ILE LEU SEQRES 15 F 557 ASN LYS GLN SER CYS SER ILE SER ASN ILE GLU THR VAL SEQRES 16 F 557 ILE GLU PHE GLN GLN LYS ASN ASN ARG LEU LEU GLU ILE SEQRES 17 F 557 THR ARG GLU PHE SER VAL ASN ALA GLY VAL THR THR PRO SEQRES 18 F 557 VAL SER THR TYR MET LEU THR ASN SER GLU LEU LEU SER SEQRES 19 F 557 LEU ILE ASN ASP MET PRO ILE THR ASN ASP GLN LYS LYS SEQRES 20 F 557 LEU MET SER ASN ASN VAL GLN ILE VAL ARG GLN GLN SER SEQRES 21 F 557 TYR SER ILE MET CYS ILE ILE LYS GLU GLU VAL LEU ALA SEQRES 22 F 557 TYR VAL VAL GLN LEU PRO LEU TYR GLY VAL ILE ASP THR SEQRES 23 F 557 PRO CYS TRP LYS LEU HIS THR SER PRO LEU CYS THR THR SEQRES 24 F 557 ASN THR LYS GLU GLY SER ASN ILE CYS LEU THR ARG THR SEQRES 25 F 557 ASP ARG GLY TRP TYR CYS ASP ASN ALA GLY SER VAL SER SEQRES 26 F 557 PHE PHE PRO GLN ALA GLU THR CYS LYS VAL GLN SER ASN SEQRES 27 F 557 ARG VAL PHE CYS ASP THR MET ASN SER LEU THR LEU PRO SEQRES 28 F 557 SER GLU VAL ASN LEU CYS ASN VAL ASP ILE PHE ASN PRO SEQRES 29 F 557 LYS TYR ASP CYS LYS ILE MET THR SER LYS THR ASP VAL SEQRES 30 F 557 SER SER SER VAL ILE THR SER LEU GLY ALA ILE VAL SER SEQRES 31 F 557 CYS TYR GLY LYS THR LYS CYS THR ALA SER ASN LYS ASN SEQRES 32 F 557 ARG GLY ILE ILE LYS THR PHE SER ASN GLY CYS ASP TYR SEQRES 33 F 557 VAL SER ASN LYS GLY VAL ASP THR VAL SER VAL GLY ASN SEQRES 34 F 557 THR LEU TYR TYR VAL ASN LYS GLN GLU GLY LYS SER LEU SEQRES 35 F 557 TYR VAL LYS GLY GLU PRO ILE ILE ASN PHE TYR ASP PRO SEQRES 36 F 557 LEU VAL PHE PRO SER ASP GLU PHE ASP ALA SER ILE SER SEQRES 37 F 557 GLN VAL ASN GLU LYS ILE ASN GLN SER LEU ALA PHE ILE SEQRES 38 F 557 ARG LYS SER ASP GLU LEU LEU SER ALA ILE GLY GLY TYR SEQRES 39 F 557 ILE PRO GLU ALA PRO ARG ASP GLY GLN ALA TYR VAL ARG SEQRES 40 F 557 LYS ASP GLY GLU TRP VAL LEU LEU SER THR PHE LEU GLY SEQRES 41 F 557 GLY LEU VAL PRO ARG GLY SER SER ALA TRP SER HIS PRO SEQRES 42 F 557 GLN PHE GLU LYS GLY GLY GLY SER GLY GLY GLY SER GLY SEQRES 43 F 557 GLY GLY SER TRP SER HIS PRO GLN PHE GLU LYS HET 336 F 601 36 HET SO4 F 602 5 HET PG0 F 603 8 HET PG0 F 604 8 HET CA F 605 1 HETNAM 336 4-{2-[4-(3,10-DIBROMO-8-CHLORO-6,11-DIHYDRO-5H-BENZO[5, HETNAM 2 336 6]CYCLOHEPTA[1,2-B]PYRIDIN-11-YL)PIPERIDIN-1-YL]-2- HETNAM 3 336 OXOETHYL}PIPERIDINE-1-CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM PG0 2-(2-METHOXYETHOXY)ETHANOL HETNAM CA CALCIUM ION HETSYN 336 SCH66336 HETSYN PG0 PEG 6000 FORMUL 2 336 C27 H31 BR2 CL N4 O2 FORMUL 3 SO4 O4 S 2- FORMUL 4 PG0 2(C5 H12 O3) FORMUL 6 CA CA 2+ FORMUL 7 HOH *177(H2 O) HELIX 1 AA1 ALA F 74 SER F 99 1 26 HELIX 2 AA2 PHE F 137 LEU F 142 5 6 HELIX 3 AA3 ILE F 148 HIS F 159 1 12 HELIX 4 AA4 GLY F 162 LEU F 171 1 10 HELIX 5 AA5 LEU F 195 GLN F 202 1 8 HELIX 6 AA6 LEU F 203 GLN F 210 1 8 HELIX 7 AA7 ILE F 217 VAL F 239 1 23 HELIX 8 AA8 THR F 253 MET F 264 1 12 HELIX 9 AA9 THR F 267 ASN F 277 1 11 HELIX 10 AB1 ASN F 277 GLN F 284 1 8 HELIX 11 AB2 GLN F 354 CYS F 358 5 5 HELIX 12 AB3 MET F 370 SER F 372 5 3 HELIX 13 AB4 GLU F 378 VAL F 384 5 7 HELIX 14 AB5 PRO F 473 TYR F 478 5 6 HELIX 15 AB6 ILE F 492 ILE F 516 1 25 SHEET 1 AA1 7 LYS F 359 GLN F 361 0 SHEET 2 AA1 7 ARG F 364 ASP F 368 -1 O PHE F 366 N LYS F 359 SHEET 3 AA1 7 SER F 38 ARG F 49 1 N ARG F 49 O CYS F 367 SHEET 4 AA1 7 VAL F 308 THR F 318 -1 O HIS F 317 N ALA F 39 SHEET 5 AA1 7 GLY F 340 ASN F 345 -1 O GLY F 340 N LEU F 316 SHEET 6 AA1 7 SER F 348 PHE F 352 -1 O PHE F 352 N TRP F 341 SHEET 7 AA1 7 LEU F 373 PRO F 376 -1 O LEU F 373 N PHE F 351 SHEET 1 AA2 5 LYS F 359 GLN F 361 0 SHEET 2 AA2 5 ARG F 364 ASP F 368 -1 O PHE F 366 N LYS F 359 SHEET 3 AA2 5 SER F 38 ARG F 49 1 N ARG F 49 O CYS F 367 SHEET 4 AA2 5 THR F 29 TYR F 33 -1 N TYR F 33 O SER F 38 SHEET 5 AA2 5 LYS F 465 VAL F 469 1 O LEU F 467 N GLU F 30 SHEET 1 AA3 6 LYS F 176 SER F 180 0 SHEET 2 AA3 6 SER F 186 ASP F 194 -1 O VAL F 187 N VAL F 179 SHEET 3 AA3 6 GLY F 51 GLU F 60 1 N THR F 58 O PHE F 190 SHEET 4 AA3 6 VAL F 296 LEU F 305 -1 O TYR F 299 N ILE F 57 SHEET 5 AA3 6 TYR F 286 LYS F 293 -1 N ILE F 288 O VAL F 300 SHEET 6 AA3 6 VAL F 243 THR F 244 -1 N THR F 244 O SER F 287 SHEET 1 AA4 4 LEU F 321 CYS F 322 0 SHEET 2 AA4 4 CYS F 333 ARG F 336 -1 O LEU F 334 N LEU F 321 SHEET 3 AA4 4 LYS F 394 SER F 398 -1 O SER F 398 N CYS F 333 SHEET 4 AA4 4 ALA F 490 SER F 491 -1 O ALA F 490 N ILE F 395 SHEET 1 AA5 3 SER F 404 ILE F 407 0 SHEET 2 AA5 3 GLY F 411 CYS F 416 -1 O SER F 415 N SER F 404 SHEET 3 AA5 3 GLY F 438 SER F 443 -1 O ASP F 440 N VAL F 414 SHEET 1 AA6 4 GLY F 430 THR F 434 0 SHEET 2 AA6 4 CYS F 422 ASN F 426 -1 N ALA F 424 O ILE F 432 SHEET 3 AA6 4 THR F 449 VAL F 452 -1 O THR F 449 N SER F 425 SHEET 4 AA6 4 THR F 455 TYR F 458 -1 O TYR F 457 N VAL F 450 SSBOND 1 CYS F 37 CYS F 439 1555 1555 2.03 SSBOND 2 CYS F 69 CYS F 212 1555 1555 2.04 SSBOND 3 CYS F 155 CYS F 290 1555 1555 2.04 SSBOND 4 CYS F 313 CYS F 343 1555 1555 2.04 SSBOND 5 CYS F 322 CYS F 333 1555 1555 2.02 SSBOND 6 CYS F 358 CYS F 367 1555 1555 2.04 SSBOND 7 CYS F 382 CYS F 393 1555 1555 2.03 SSBOND 8 CYS F 416 CYS F 422 1555 1555 2.04 LINK CA CA F 605 O HOH F 772 1555 1555 3.02 CISPEP 1 THR F 245 PRO F 246 0 2.23 CRYST1 88.640 88.640 194.980 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011282 0.006513 0.000000 0.00000 SCALE2 0.000000 0.013027 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005129 0.00000