data_8PKD # _entry.id 8PKD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8PKD pdb_00008pkd 10.2210/pdb8pkd/pdb WWPDB D_1292131483 ? ? EMDB EMD-17735 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-12-20 2 'Structure model' 1 1 2024-01-03 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 2 'Structure model' '_citation_author.identifier_ORCID' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8PKD _pdbx_database_status.recvd_initial_deposition_date 2023-06-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of Orrella dioscoreae BcsD' _pdbx_database_related.db_id EMD-17735 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email pv.krasteva@iecb.u-bordeaux.fr _pdbx_contact_author.name_first Petya _pdbx_contact_author.name_last Krasteva _pdbx_contact_author.name_mi V. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1858-8127 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Puygrenier, L.' 1 ? 'Decossas, M.' 2 0000-0003-0810-4309 'Krasteva, P.V.' 3 0000-0002-1858-8127 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Curr.Biol. _citation.journal_id_ASTM CUBLE2 _citation.journal_id_CSD 2060 _citation.journal_id_ISSN 0960-9822 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 34 _citation.language ? _citation.page_first 106 _citation.page_last ? _citation.title 'Structures and roles of BcsD and partner scaffold proteins in proteobacterial cellulose secretion.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.cub.2023.11.057 _citation.pdbx_database_id_PubMed 38141614 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sana, T.G.' 1 ? primary 'Notopoulou, A.' 2 ? primary 'Puygrenier, L.' 3 ? primary 'Decossas, M.' 4 ? primary 'Moreau, S.' 5 ? primary 'Carlier, A.' 6 ? primary 'Krasteva, P.V.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cellulose synthase operon protein D' 17448.371 4 ? ? ? ? 2 water nat water 18.015 16 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSMENPLFDYYRNRQAPLQWRGALGALAQSLTNHFSPEQLRTLLREAGQHFASQHPVQAAETVQSMQDAMNGVWTTQDW GWVDIHDLDSFLTLTHYAAPLESAFGAQNLAWSAAFLEGVYEQWFRQLGASDALHVRQSEESDVRKAIVLRLGR ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSMENPLFDYYRNRQAPLQWRGALGALAQSLTNHFSPEQLRTLLREAGQHFASQHPVQAAETVQSMQDAMNGVWTTQDW GWVDIHDLDSFLTLTHYAAPLESAFGAQNLAWSAAFLEGVYEQWFRQLGASDALHVRQSEESDVRKAIVLRLGR ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 MET n 1 5 GLU n 1 6 ASN n 1 7 PRO n 1 8 LEU n 1 9 PHE n 1 10 ASP n 1 11 TYR n 1 12 TYR n 1 13 ARG n 1 14 ASN n 1 15 ARG n 1 16 GLN n 1 17 ALA n 1 18 PRO n 1 19 LEU n 1 20 GLN n 1 21 TRP n 1 22 ARG n 1 23 GLY n 1 24 ALA n 1 25 LEU n 1 26 GLY n 1 27 ALA n 1 28 LEU n 1 29 ALA n 1 30 GLN n 1 31 SER n 1 32 LEU n 1 33 THR n 1 34 ASN n 1 35 HIS n 1 36 PHE n 1 37 SER n 1 38 PRO n 1 39 GLU n 1 40 GLN n 1 41 LEU n 1 42 ARG n 1 43 THR n 1 44 LEU n 1 45 LEU n 1 46 ARG n 1 47 GLU n 1 48 ALA n 1 49 GLY n 1 50 GLN n 1 51 HIS n 1 52 PHE n 1 53 ALA n 1 54 SER n 1 55 GLN n 1 56 HIS n 1 57 PRO n 1 58 VAL n 1 59 GLN n 1 60 ALA n 1 61 ALA n 1 62 GLU n 1 63 THR n 1 64 VAL n 1 65 GLN n 1 66 SER n 1 67 MET n 1 68 GLN n 1 69 ASP n 1 70 ALA n 1 71 MET n 1 72 ASN n 1 73 GLY n 1 74 VAL n 1 75 TRP n 1 76 THR n 1 77 THR n 1 78 GLN n 1 79 ASP n 1 80 TRP n 1 81 GLY n 1 82 TRP n 1 83 VAL n 1 84 ASP n 1 85 ILE n 1 86 HIS n 1 87 ASP n 1 88 LEU n 1 89 ASP n 1 90 SER n 1 91 PHE n 1 92 LEU n 1 93 THR n 1 94 LEU n 1 95 THR n 1 96 HIS n 1 97 TYR n 1 98 ALA n 1 99 ALA n 1 100 PRO n 1 101 LEU n 1 102 GLU n 1 103 SER n 1 104 ALA n 1 105 PHE n 1 106 GLY n 1 107 ALA n 1 108 GLN n 1 109 ASN n 1 110 LEU n 1 111 ALA n 1 112 TRP n 1 113 SER n 1 114 ALA n 1 115 ALA n 1 116 PHE n 1 117 LEU n 1 118 GLU n 1 119 GLY n 1 120 VAL n 1 121 TYR n 1 122 GLU n 1 123 GLN n 1 124 TRP n 1 125 PHE n 1 126 ARG n 1 127 GLN n 1 128 LEU n 1 129 GLY n 1 130 ALA n 1 131 SER n 1 132 ASP n 1 133 ALA n 1 134 LEU n 1 135 HIS n 1 136 VAL n 1 137 ARG n 1 138 GLN n 1 139 SER n 1 140 GLU n 1 141 GLU n 1 142 SER n 1 143 ASP n 1 144 VAL n 1 145 ARG n 1 146 LYS n 1 147 ALA n 1 148 ILE n 1 149 VAL n 1 150 LEU n 1 151 ARG n 1 152 LEU n 1 153 GLY n 1 154 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 154 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ODI_03820 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Orrella dioscoreae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1851544 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -2 ? ? ? A . n A 1 2 GLY 2 -1 ? ? ? A . n A 1 3 SER 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLU 5 2 2 GLU GLU A . n A 1 6 ASN 6 3 3 ASN ASN A . n A 1 7 PRO 7 4 4 PRO PRO A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 PHE 9 6 6 PHE PHE A . n A 1 10 ASP 10 7 7 ASP ASP A . n A 1 11 TYR 11 8 8 TYR TYR A . n A 1 12 TYR 12 9 9 TYR TYR A . n A 1 13 ARG 13 10 10 ARG ARG A . n A 1 14 ASN 14 11 11 ASN ASN A . n A 1 15 ARG 15 12 12 ARG ARG A . n A 1 16 GLN 16 13 13 GLN GLN A . n A 1 17 ALA 17 14 14 ALA ALA A . n A 1 18 PRO 18 15 15 PRO PRO A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 GLN 20 17 17 GLN GLN A . n A 1 21 TRP 21 18 18 TRP TRP A . n A 1 22 ARG 22 19 19 ARG ARG A . n A 1 23 GLY 23 20 20 GLY GLY A . n A 1 24 ALA 24 21 21 ALA ALA A . n A 1 25 LEU 25 22 22 LEU LEU A . n A 1 26 GLY 26 23 23 GLY GLY A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 LEU 28 25 25 LEU LEU A . n A 1 29 ALA 29 26 26 ALA ALA A . n A 1 30 GLN 30 27 27 GLN GLN A . n A 1 31 SER 31 28 28 SER SER A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 THR 33 30 30 THR THR A . n A 1 34 ASN 34 31 31 ASN ASN A . n A 1 35 HIS 35 32 32 HIS HIS A . n A 1 36 PHE 36 33 33 PHE PHE A . n A 1 37 SER 37 34 34 SER SER A . n A 1 38 PRO 38 35 35 PRO PRO A . n A 1 39 GLU 39 36 36 GLU GLU A . n A 1 40 GLN 40 37 37 GLN GLN A . n A 1 41 LEU 41 38 38 LEU LEU A . n A 1 42 ARG 42 39 39 ARG ARG A . n A 1 43 THR 43 40 40 THR THR A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 LEU 45 42 42 LEU LEU A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 GLU 47 44 44 GLU GLU A . n A 1 48 ALA 48 45 45 ALA ALA A . n A 1 49 GLY 49 46 46 GLY GLY A . n A 1 50 GLN 50 47 47 GLN GLN A . n A 1 51 HIS 51 48 48 HIS HIS A . n A 1 52 PHE 52 49 49 PHE PHE A . n A 1 53 ALA 53 50 50 ALA ALA A . n A 1 54 SER 54 51 51 SER SER A . n A 1 55 GLN 55 52 52 GLN GLN A . n A 1 56 HIS 56 53 53 HIS HIS A . n A 1 57 PRO 57 54 54 PRO PRO A . n A 1 58 VAL 58 55 55 VAL VAL A . n A 1 59 GLN 59 56 56 GLN GLN A . n A 1 60 ALA 60 57 57 ALA ALA A . n A 1 61 ALA 61 58 58 ALA ALA A . n A 1 62 GLU 62 59 59 GLU GLU A . n A 1 63 THR 63 60 60 THR THR A . n A 1 64 VAL 64 61 61 VAL VAL A . n A 1 65 GLN 65 62 62 GLN GLN A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 MET 67 64 64 MET MET A . n A 1 68 GLN 68 65 65 GLN GLN A . n A 1 69 ASP 69 66 66 ASP ASP A . n A 1 70 ALA 70 67 67 ALA ALA A . n A 1 71 MET 71 68 68 MET MET A . n A 1 72 ASN 72 69 69 ASN ASN A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 VAL 74 71 71 VAL VAL A . n A 1 75 TRP 75 72 72 TRP TRP A . n A 1 76 THR 76 73 73 THR THR A . n A 1 77 THR 77 74 74 THR THR A . n A 1 78 GLN 78 75 75 GLN GLN A . n A 1 79 ASP 79 76 76 ASP ASP A . n A 1 80 TRP 80 77 77 TRP TRP A . n A 1 81 GLY 81 78 78 GLY GLY A . n A 1 82 TRP 82 79 79 TRP TRP A . n A 1 83 VAL 83 80 80 VAL VAL A . n A 1 84 ASP 84 81 81 ASP ASP A . n A 1 85 ILE 85 82 82 ILE ILE A . n A 1 86 HIS 86 83 83 HIS HIS A . n A 1 87 ASP 87 84 84 ASP ASP A . n A 1 88 LEU 88 85 85 LEU LEU A . n A 1 89 ASP 89 86 86 ASP ASP A . n A 1 90 SER 90 87 87 SER SER A . n A 1 91 PHE 91 88 88 PHE PHE A . n A 1 92 LEU 92 89 89 LEU LEU A . n A 1 93 THR 93 90 90 THR THR A . n A 1 94 LEU 94 91 91 LEU LEU A . n A 1 95 THR 95 92 92 THR THR A . n A 1 96 HIS 96 93 93 HIS HIS A . n A 1 97 TYR 97 94 94 TYR TYR A . n A 1 98 ALA 98 95 95 ALA ALA A . n A 1 99 ALA 99 96 96 ALA ALA A . n A 1 100 PRO 100 97 97 PRO PRO A . n A 1 101 LEU 101 98 98 LEU LEU A . n A 1 102 GLU 102 99 99 GLU GLU A . n A 1 103 SER 103 100 100 SER SER A . n A 1 104 ALA 104 101 101 ALA ALA A . n A 1 105 PHE 105 102 102 PHE PHE A . n A 1 106 GLY 106 103 103 GLY GLY A . n A 1 107 ALA 107 104 104 ALA ALA A . n A 1 108 GLN 108 105 105 GLN GLN A . n A 1 109 ASN 109 106 106 ASN ASN A . n A 1 110 LEU 110 107 107 LEU LEU A . n A 1 111 ALA 111 108 108 ALA ALA A . n A 1 112 TRP 112 109 109 TRP TRP A . n A 1 113 SER 113 110 110 SER SER A . n A 1 114 ALA 114 111 111 ALA ALA A . n A 1 115 ALA 115 112 112 ALA ALA A . n A 1 116 PHE 116 113 113 PHE PHE A . n A 1 117 LEU 117 114 114 LEU LEU A . n A 1 118 GLU 118 115 115 GLU GLU A . n A 1 119 GLY 119 116 116 GLY GLY A . n A 1 120 VAL 120 117 117 VAL VAL A . n A 1 121 TYR 121 118 118 TYR TYR A . n A 1 122 GLU 122 119 119 GLU GLU A . n A 1 123 GLN 123 120 120 GLN GLN A . n A 1 124 TRP 124 121 121 TRP TRP A . n A 1 125 PHE 125 122 122 PHE PHE A . n A 1 126 ARG 126 123 123 ARG ARG A . n A 1 127 GLN 127 124 124 GLN GLN A . n A 1 128 LEU 128 125 125 LEU LEU A . n A 1 129 GLY 129 126 126 GLY GLY A . n A 1 130 ALA 130 127 127 ALA ALA A . n A 1 131 SER 131 128 128 SER SER A . n A 1 132 ASP 132 129 129 ASP ASP A . n A 1 133 ALA 133 130 130 ALA ALA A . n A 1 134 LEU 134 131 131 LEU LEU A . n A 1 135 HIS 135 132 132 HIS HIS A . n A 1 136 VAL 136 133 133 VAL VAL A . n A 1 137 ARG 137 134 134 ARG ARG A . n A 1 138 GLN 138 135 135 GLN GLN A . n A 1 139 SER 139 136 136 SER SER A . n A 1 140 GLU 140 137 137 GLU GLU A . n A 1 141 GLU 141 138 138 GLU GLU A . n A 1 142 SER 142 139 139 SER SER A . n A 1 143 ASP 143 140 140 ASP ASP A . n A 1 144 VAL 144 141 141 VAL VAL A . n A 1 145 ARG 145 142 142 ARG ARG A . n A 1 146 LYS 146 143 143 LYS LYS A . n A 1 147 ALA 147 144 144 ALA ALA A . n A 1 148 ILE 148 145 145 ILE ILE A . n A 1 149 VAL 149 146 146 VAL VAL A . n A 1 150 LEU 150 147 147 LEU LEU A . n A 1 151 ARG 151 148 148 ARG ARG A . n A 1 152 LEU 152 149 149 LEU LEU A . n A 1 153 GLY 153 150 150 GLY GLY A . n A 1 154 ARG 154 151 151 ARG ARG A . n B 1 1 MET 1 -2 ? ? ? B . n B 1 2 GLY 2 -1 ? ? ? B . n B 1 3 SER 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLU 5 2 2 GLU GLU B . n B 1 6 ASN 6 3 3 ASN ASN B . n B 1 7 PRO 7 4 4 PRO PRO B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 PHE 9 6 6 PHE PHE B . n B 1 10 ASP 10 7 7 ASP ASP B . n B 1 11 TYR 11 8 8 TYR TYR B . n B 1 12 TYR 12 9 9 TYR TYR B . n B 1 13 ARG 13 10 10 ARG ARG B . n B 1 14 ASN 14 11 11 ASN ASN B . n B 1 15 ARG 15 12 12 ARG ARG B . n B 1 16 GLN 16 13 13 GLN GLN B . n B 1 17 ALA 17 14 14 ALA ALA B . n B 1 18 PRO 18 15 15 PRO PRO B . n B 1 19 LEU 19 16 16 LEU LEU B . n B 1 20 GLN 20 17 17 GLN GLN B . n B 1 21 TRP 21 18 18 TRP TRP B . n B 1 22 ARG 22 19 19 ARG ARG B . n B 1 23 GLY 23 20 20 GLY GLY B . n B 1 24 ALA 24 21 21 ALA ALA B . n B 1 25 LEU 25 22 22 LEU LEU B . n B 1 26 GLY 26 23 23 GLY GLY B . n B 1 27 ALA 27 24 24 ALA ALA B . n B 1 28 LEU 28 25 25 LEU LEU B . n B 1 29 ALA 29 26 26 ALA ALA B . n B 1 30 GLN 30 27 27 GLN GLN B . n B 1 31 SER 31 28 28 SER SER B . n B 1 32 LEU 32 29 29 LEU LEU B . n B 1 33 THR 33 30 30 THR THR B . n B 1 34 ASN 34 31 31 ASN ASN B . n B 1 35 HIS 35 32 32 HIS HIS B . n B 1 36 PHE 36 33 33 PHE PHE B . n B 1 37 SER 37 34 34 SER SER B . n B 1 38 PRO 38 35 35 PRO PRO B . n B 1 39 GLU 39 36 36 GLU GLU B . n B 1 40 GLN 40 37 37 GLN GLN B . n B 1 41 LEU 41 38 38 LEU LEU B . n B 1 42 ARG 42 39 39 ARG ARG B . n B 1 43 THR 43 40 40 THR THR B . n B 1 44 LEU 44 41 41 LEU LEU B . n B 1 45 LEU 45 42 42 LEU LEU B . n B 1 46 ARG 46 43 43 ARG ARG B . n B 1 47 GLU 47 44 44 GLU GLU B . n B 1 48 ALA 48 45 45 ALA ALA B . n B 1 49 GLY 49 46 46 GLY GLY B . n B 1 50 GLN 50 47 47 GLN GLN B . n B 1 51 HIS 51 48 48 HIS HIS B . n B 1 52 PHE 52 49 49 PHE PHE B . n B 1 53 ALA 53 50 50 ALA ALA B . n B 1 54 SER 54 51 51 SER SER B . n B 1 55 GLN 55 52 52 GLN GLN B . n B 1 56 HIS 56 53 53 HIS HIS B . n B 1 57 PRO 57 54 54 PRO PRO B . n B 1 58 VAL 58 55 55 VAL VAL B . n B 1 59 GLN 59 56 56 GLN GLN B . n B 1 60 ALA 60 57 57 ALA ALA B . n B 1 61 ALA 61 58 58 ALA ALA B . n B 1 62 GLU 62 59 59 GLU GLU B . n B 1 63 THR 63 60 60 THR THR B . n B 1 64 VAL 64 61 61 VAL VAL B . n B 1 65 GLN 65 62 62 GLN GLN B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 MET 67 64 64 MET MET B . n B 1 68 GLN 68 65 65 GLN GLN B . n B 1 69 ASP 69 66 66 ASP ASP B . n B 1 70 ALA 70 67 67 ALA ALA B . n B 1 71 MET 71 68 68 MET MET B . n B 1 72 ASN 72 69 69 ASN ASN B . n B 1 73 GLY 73 70 70 GLY GLY B . n B 1 74 VAL 74 71 71 VAL VAL B . n B 1 75 TRP 75 72 72 TRP TRP B . n B 1 76 THR 76 73 73 THR THR B . n B 1 77 THR 77 74 74 THR THR B . n B 1 78 GLN 78 75 75 GLN GLN B . n B 1 79 ASP 79 76 76 ASP ASP B . n B 1 80 TRP 80 77 77 TRP TRP B . n B 1 81 GLY 81 78 78 GLY GLY B . n B 1 82 TRP 82 79 79 TRP TRP B . n B 1 83 VAL 83 80 80 VAL VAL B . n B 1 84 ASP 84 81 81 ASP ASP B . n B 1 85 ILE 85 82 82 ILE ILE B . n B 1 86 HIS 86 83 83 HIS HIS B . n B 1 87 ASP 87 84 84 ASP ASP B . n B 1 88 LEU 88 85 85 LEU LEU B . n B 1 89 ASP 89 86 86 ASP ASP B . n B 1 90 SER 90 87 87 SER SER B . n B 1 91 PHE 91 88 88 PHE PHE B . n B 1 92 LEU 92 89 89 LEU LEU B . n B 1 93 THR 93 90 90 THR THR B . n B 1 94 LEU 94 91 91 LEU LEU B . n B 1 95 THR 95 92 92 THR THR B . n B 1 96 HIS 96 93 93 HIS HIS B . n B 1 97 TYR 97 94 94 TYR TYR B . n B 1 98 ALA 98 95 95 ALA ALA B . n B 1 99 ALA 99 96 96 ALA ALA B . n B 1 100 PRO 100 97 97 PRO PRO B . n B 1 101 LEU 101 98 98 LEU LEU B . n B 1 102 GLU 102 99 99 GLU GLU B . n B 1 103 SER 103 100 100 SER SER B . n B 1 104 ALA 104 101 101 ALA ALA B . n B 1 105 PHE 105 102 102 PHE PHE B . n B 1 106 GLY 106 103 103 GLY GLY B . n B 1 107 ALA 107 104 104 ALA ALA B . n B 1 108 GLN 108 105 105 GLN GLN B . n B 1 109 ASN 109 106 106 ASN ASN B . n B 1 110 LEU 110 107 107 LEU LEU B . n B 1 111 ALA 111 108 108 ALA ALA B . n B 1 112 TRP 112 109 109 TRP TRP B . n B 1 113 SER 113 110 110 SER SER B . n B 1 114 ALA 114 111 111 ALA ALA B . n B 1 115 ALA 115 112 112 ALA ALA B . n B 1 116 PHE 116 113 113 PHE PHE B . n B 1 117 LEU 117 114 114 LEU LEU B . n B 1 118 GLU 118 115 115 GLU GLU B . n B 1 119 GLY 119 116 116 GLY GLY B . n B 1 120 VAL 120 117 117 VAL VAL B . n B 1 121 TYR 121 118 118 TYR TYR B . n B 1 122 GLU 122 119 119 GLU GLU B . n B 1 123 GLN 123 120 120 GLN GLN B . n B 1 124 TRP 124 121 121 TRP TRP B . n B 1 125 PHE 125 122 122 PHE PHE B . n B 1 126 ARG 126 123 123 ARG ARG B . n B 1 127 GLN 127 124 124 GLN GLN B . n B 1 128 LEU 128 125 125 LEU LEU B . n B 1 129 GLY 129 126 126 GLY GLY B . n B 1 130 ALA 130 127 127 ALA ALA B . n B 1 131 SER 131 128 128 SER SER B . n B 1 132 ASP 132 129 129 ASP ASP B . n B 1 133 ALA 133 130 130 ALA ALA B . n B 1 134 LEU 134 131 131 LEU LEU B . n B 1 135 HIS 135 132 132 HIS HIS B . n B 1 136 VAL 136 133 133 VAL VAL B . n B 1 137 ARG 137 134 134 ARG ARG B . n B 1 138 GLN 138 135 135 GLN GLN B . n B 1 139 SER 139 136 136 SER SER B . n B 1 140 GLU 140 137 137 GLU GLU B . n B 1 141 GLU 141 138 138 GLU GLU B . n B 1 142 SER 142 139 139 SER SER B . n B 1 143 ASP 143 140 140 ASP ASP B . n B 1 144 VAL 144 141 141 VAL VAL B . n B 1 145 ARG 145 142 142 ARG ARG B . n B 1 146 LYS 146 143 143 LYS LYS B . n B 1 147 ALA 147 144 144 ALA ALA B . n B 1 148 ILE 148 145 145 ILE ILE B . n B 1 149 VAL 149 146 146 VAL VAL B . n B 1 150 LEU 150 147 147 LEU LEU B . n B 1 151 ARG 151 148 148 ARG ARG B . n B 1 152 LEU 152 149 149 LEU LEU B . n B 1 153 GLY 153 150 150 GLY GLY B . n B 1 154 ARG 154 151 151 ARG ARG B . n C 1 1 MET 1 -2 ? ? ? C . n C 1 2 GLY 2 -1 ? ? ? C . n C 1 3 SER 3 0 ? ? ? C . n C 1 4 MET 4 1 ? ? ? C . n C 1 5 GLU 5 2 2 GLU GLU C . n C 1 6 ASN 6 3 3 ASN ASN C . n C 1 7 PRO 7 4 4 PRO PRO C . n C 1 8 LEU 8 5 5 LEU LEU C . n C 1 9 PHE 9 6 6 PHE PHE C . n C 1 10 ASP 10 7 7 ASP ASP C . n C 1 11 TYR 11 8 8 TYR TYR C . n C 1 12 TYR 12 9 9 TYR TYR C . n C 1 13 ARG 13 10 10 ARG ARG C . n C 1 14 ASN 14 11 11 ASN ASN C . n C 1 15 ARG 15 12 12 ARG ARG C . n C 1 16 GLN 16 13 13 GLN GLN C . n C 1 17 ALA 17 14 14 ALA ALA C . n C 1 18 PRO 18 15 15 PRO PRO C . n C 1 19 LEU 19 16 16 LEU LEU C . n C 1 20 GLN 20 17 17 GLN GLN C . n C 1 21 TRP 21 18 18 TRP TRP C . n C 1 22 ARG 22 19 19 ARG ARG C . n C 1 23 GLY 23 20 20 GLY GLY C . n C 1 24 ALA 24 21 21 ALA ALA C . n C 1 25 LEU 25 22 22 LEU LEU C . n C 1 26 GLY 26 23 23 GLY GLY C . n C 1 27 ALA 27 24 24 ALA ALA C . n C 1 28 LEU 28 25 25 LEU LEU C . n C 1 29 ALA 29 26 26 ALA ALA C . n C 1 30 GLN 30 27 27 GLN GLN C . n C 1 31 SER 31 28 28 SER SER C . n C 1 32 LEU 32 29 29 LEU LEU C . n C 1 33 THR 33 30 30 THR THR C . n C 1 34 ASN 34 31 31 ASN ASN C . n C 1 35 HIS 35 32 32 HIS HIS C . n C 1 36 PHE 36 33 33 PHE PHE C . n C 1 37 SER 37 34 34 SER SER C . n C 1 38 PRO 38 35 35 PRO PRO C . n C 1 39 GLU 39 36 36 GLU GLU C . n C 1 40 GLN 40 37 37 GLN GLN C . n C 1 41 LEU 41 38 38 LEU LEU C . n C 1 42 ARG 42 39 39 ARG ARG C . n C 1 43 THR 43 40 40 THR THR C . n C 1 44 LEU 44 41 41 LEU LEU C . n C 1 45 LEU 45 42 42 LEU LEU C . n C 1 46 ARG 46 43 43 ARG ARG C . n C 1 47 GLU 47 44 44 GLU GLU C . n C 1 48 ALA 48 45 45 ALA ALA C . n C 1 49 GLY 49 46 46 GLY GLY C . n C 1 50 GLN 50 47 47 GLN GLN C . n C 1 51 HIS 51 48 48 HIS HIS C . n C 1 52 PHE 52 49 49 PHE PHE C . n C 1 53 ALA 53 50 50 ALA ALA C . n C 1 54 SER 54 51 51 SER SER C . n C 1 55 GLN 55 52 52 GLN GLN C . n C 1 56 HIS 56 53 53 HIS HIS C . n C 1 57 PRO 57 54 54 PRO PRO C . n C 1 58 VAL 58 55 55 VAL VAL C . n C 1 59 GLN 59 56 56 GLN GLN C . n C 1 60 ALA 60 57 57 ALA ALA C . n C 1 61 ALA 61 58 58 ALA ALA C . n C 1 62 GLU 62 59 59 GLU GLU C . n C 1 63 THR 63 60 60 THR THR C . n C 1 64 VAL 64 61 61 VAL VAL C . n C 1 65 GLN 65 62 62 GLN GLN C . n C 1 66 SER 66 63 63 SER SER C . n C 1 67 MET 67 64 64 MET MET C . n C 1 68 GLN 68 65 65 GLN GLN C . n C 1 69 ASP 69 66 66 ASP ASP C . n C 1 70 ALA 70 67 67 ALA ALA C . n C 1 71 MET 71 68 68 MET MET C . n C 1 72 ASN 72 69 69 ASN ASN C . n C 1 73 GLY 73 70 70 GLY GLY C . n C 1 74 VAL 74 71 71 VAL VAL C . n C 1 75 TRP 75 72 72 TRP TRP C . n C 1 76 THR 76 73 73 THR THR C . n C 1 77 THR 77 74 74 THR THR C . n C 1 78 GLN 78 75 75 GLN GLN C . n C 1 79 ASP 79 76 76 ASP ASP C . n C 1 80 TRP 80 77 77 TRP TRP C . n C 1 81 GLY 81 78 78 GLY GLY C . n C 1 82 TRP 82 79 79 TRP TRP C . n C 1 83 VAL 83 80 80 VAL VAL C . n C 1 84 ASP 84 81 81 ASP ASP C . n C 1 85 ILE 85 82 82 ILE ILE C . n C 1 86 HIS 86 83 83 HIS HIS C . n C 1 87 ASP 87 84 84 ASP ASP C . n C 1 88 LEU 88 85 85 LEU LEU C . n C 1 89 ASP 89 86 86 ASP ASP C . n C 1 90 SER 90 87 87 SER SER C . n C 1 91 PHE 91 88 88 PHE PHE C . n C 1 92 LEU 92 89 89 LEU LEU C . n C 1 93 THR 93 90 90 THR THR C . n C 1 94 LEU 94 91 91 LEU LEU C . n C 1 95 THR 95 92 92 THR THR C . n C 1 96 HIS 96 93 93 HIS HIS C . n C 1 97 TYR 97 94 94 TYR TYR C . n C 1 98 ALA 98 95 95 ALA ALA C . n C 1 99 ALA 99 96 96 ALA ALA C . n C 1 100 PRO 100 97 97 PRO PRO C . n C 1 101 LEU 101 98 98 LEU LEU C . n C 1 102 GLU 102 99 99 GLU GLU C . n C 1 103 SER 103 100 100 SER SER C . n C 1 104 ALA 104 101 101 ALA ALA C . n C 1 105 PHE 105 102 102 PHE PHE C . n C 1 106 GLY 106 103 103 GLY GLY C . n C 1 107 ALA 107 104 104 ALA ALA C . n C 1 108 GLN 108 105 105 GLN GLN C . n C 1 109 ASN 109 106 106 ASN ASN C . n C 1 110 LEU 110 107 107 LEU LEU C . n C 1 111 ALA 111 108 108 ALA ALA C . n C 1 112 TRP 112 109 109 TRP TRP C . n C 1 113 SER 113 110 110 SER SER C . n C 1 114 ALA 114 111 111 ALA ALA C . n C 1 115 ALA 115 112 112 ALA ALA C . n C 1 116 PHE 116 113 113 PHE PHE C . n C 1 117 LEU 117 114 114 LEU LEU C . n C 1 118 GLU 118 115 115 GLU GLU C . n C 1 119 GLY 119 116 116 GLY GLY C . n C 1 120 VAL 120 117 117 VAL VAL C . n C 1 121 TYR 121 118 118 TYR TYR C . n C 1 122 GLU 122 119 119 GLU GLU C . n C 1 123 GLN 123 120 120 GLN GLN C . n C 1 124 TRP 124 121 121 TRP TRP C . n C 1 125 PHE 125 122 122 PHE PHE C . n C 1 126 ARG 126 123 123 ARG ARG C . n C 1 127 GLN 127 124 124 GLN GLN C . n C 1 128 LEU 128 125 125 LEU LEU C . n C 1 129 GLY 129 126 126 GLY GLY C . n C 1 130 ALA 130 127 127 ALA ALA C . n C 1 131 SER 131 128 128 SER SER C . n C 1 132 ASP 132 129 129 ASP ASP C . n C 1 133 ALA 133 130 130 ALA ALA C . n C 1 134 LEU 134 131 131 LEU LEU C . n C 1 135 HIS 135 132 132 HIS HIS C . n C 1 136 VAL 136 133 133 VAL VAL C . n C 1 137 ARG 137 134 134 ARG ARG C . n C 1 138 GLN 138 135 135 GLN GLN C . n C 1 139 SER 139 136 136 SER SER C . n C 1 140 GLU 140 137 137 GLU GLU C . n C 1 141 GLU 141 138 138 GLU GLU C . n C 1 142 SER 142 139 139 SER SER C . n C 1 143 ASP 143 140 140 ASP ASP C . n C 1 144 VAL 144 141 141 VAL VAL C . n C 1 145 ARG 145 142 142 ARG ARG C . n C 1 146 LYS 146 143 143 LYS LYS C . n C 1 147 ALA 147 144 144 ALA ALA C . n C 1 148 ILE 148 145 145 ILE ILE C . n C 1 149 VAL 149 146 146 VAL VAL C . n C 1 150 LEU 150 147 147 LEU LEU C . n C 1 151 ARG 151 148 148 ARG ARG C . n C 1 152 LEU 152 149 149 LEU LEU C . n C 1 153 GLY 153 150 150 GLY GLY C . n C 1 154 ARG 154 151 151 ARG ARG C . n D 1 1 MET 1 -2 ? ? ? D . n D 1 2 GLY 2 -1 ? ? ? D . n D 1 3 SER 3 0 ? ? ? D . n D 1 4 MET 4 1 ? ? ? D . n D 1 5 GLU 5 2 2 GLU GLU D . n D 1 6 ASN 6 3 3 ASN ASN D . n D 1 7 PRO 7 4 4 PRO PRO D . n D 1 8 LEU 8 5 5 LEU LEU D . n D 1 9 PHE 9 6 6 PHE PHE D . n D 1 10 ASP 10 7 7 ASP ASP D . n D 1 11 TYR 11 8 8 TYR TYR D . n D 1 12 TYR 12 9 9 TYR TYR D . n D 1 13 ARG 13 10 10 ARG ARG D . n D 1 14 ASN 14 11 11 ASN ASN D . n D 1 15 ARG 15 12 12 ARG ARG D . n D 1 16 GLN 16 13 13 GLN GLN D . n D 1 17 ALA 17 14 14 ALA ALA D . n D 1 18 PRO 18 15 15 PRO PRO D . n D 1 19 LEU 19 16 16 LEU LEU D . n D 1 20 GLN 20 17 17 GLN GLN D . n D 1 21 TRP 21 18 18 TRP TRP D . n D 1 22 ARG 22 19 19 ARG ARG D . n D 1 23 GLY 23 20 20 GLY GLY D . n D 1 24 ALA 24 21 21 ALA ALA D . n D 1 25 LEU 25 22 22 LEU LEU D . n D 1 26 GLY 26 23 23 GLY GLY D . n D 1 27 ALA 27 24 24 ALA ALA D . n D 1 28 LEU 28 25 25 LEU LEU D . n D 1 29 ALA 29 26 26 ALA ALA D . n D 1 30 GLN 30 27 27 GLN GLN D . n D 1 31 SER 31 28 28 SER SER D . n D 1 32 LEU 32 29 29 LEU LEU D . n D 1 33 THR 33 30 30 THR THR D . n D 1 34 ASN 34 31 31 ASN ASN D . n D 1 35 HIS 35 32 32 HIS HIS D . n D 1 36 PHE 36 33 33 PHE PHE D . n D 1 37 SER 37 34 34 SER SER D . n D 1 38 PRO 38 35 35 PRO PRO D . n D 1 39 GLU 39 36 36 GLU GLU D . n D 1 40 GLN 40 37 37 GLN GLN D . n D 1 41 LEU 41 38 38 LEU LEU D . n D 1 42 ARG 42 39 39 ARG ARG D . n D 1 43 THR 43 40 40 THR THR D . n D 1 44 LEU 44 41 41 LEU LEU D . n D 1 45 LEU 45 42 42 LEU LEU D . n D 1 46 ARG 46 43 43 ARG ARG D . n D 1 47 GLU 47 44 44 GLU GLU D . n D 1 48 ALA 48 45 45 ALA ALA D . n D 1 49 GLY 49 46 46 GLY GLY D . n D 1 50 GLN 50 47 47 GLN GLN D . n D 1 51 HIS 51 48 48 HIS HIS D . n D 1 52 PHE 52 49 49 PHE PHE D . n D 1 53 ALA 53 50 50 ALA ALA D . n D 1 54 SER 54 51 51 SER SER D . n D 1 55 GLN 55 52 52 GLN GLN D . n D 1 56 HIS 56 53 53 HIS HIS D . n D 1 57 PRO 57 54 54 PRO PRO D . n D 1 58 VAL 58 55 55 VAL VAL D . n D 1 59 GLN 59 56 56 GLN GLN D . n D 1 60 ALA 60 57 57 ALA ALA D . n D 1 61 ALA 61 58 58 ALA ALA D . n D 1 62 GLU 62 59 59 GLU GLU D . n D 1 63 THR 63 60 60 THR THR D . n D 1 64 VAL 64 61 61 VAL VAL D . n D 1 65 GLN 65 62 62 GLN GLN D . n D 1 66 SER 66 63 63 SER SER D . n D 1 67 MET 67 64 64 MET MET D . n D 1 68 GLN 68 65 65 GLN GLN D . n D 1 69 ASP 69 66 66 ASP ASP D . n D 1 70 ALA 70 67 67 ALA ALA D . n D 1 71 MET 71 68 68 MET MET D . n D 1 72 ASN 72 69 69 ASN ASN D . n D 1 73 GLY 73 70 70 GLY GLY D . n D 1 74 VAL 74 71 71 VAL VAL D . n D 1 75 TRP 75 72 72 TRP TRP D . n D 1 76 THR 76 73 73 THR THR D . n D 1 77 THR 77 74 74 THR THR D . n D 1 78 GLN 78 75 75 GLN GLN D . n D 1 79 ASP 79 76 76 ASP ASP D . n D 1 80 TRP 80 77 77 TRP TRP D . n D 1 81 GLY 81 78 78 GLY GLY D . n D 1 82 TRP 82 79 79 TRP TRP D . n D 1 83 VAL 83 80 80 VAL VAL D . n D 1 84 ASP 84 81 81 ASP ASP D . n D 1 85 ILE 85 82 82 ILE ILE D . n D 1 86 HIS 86 83 83 HIS HIS D . n D 1 87 ASP 87 84 84 ASP ASP D . n D 1 88 LEU 88 85 85 LEU LEU D . n D 1 89 ASP 89 86 86 ASP ASP D . n D 1 90 SER 90 87 87 SER SER D . n D 1 91 PHE 91 88 88 PHE PHE D . n D 1 92 LEU 92 89 89 LEU LEU D . n D 1 93 THR 93 90 90 THR THR D . n D 1 94 LEU 94 91 91 LEU LEU D . n D 1 95 THR 95 92 92 THR THR D . n D 1 96 HIS 96 93 93 HIS HIS D . n D 1 97 TYR 97 94 94 TYR TYR D . n D 1 98 ALA 98 95 95 ALA ALA D . n D 1 99 ALA 99 96 96 ALA ALA D . n D 1 100 PRO 100 97 97 PRO PRO D . n D 1 101 LEU 101 98 98 LEU LEU D . n D 1 102 GLU 102 99 99 GLU GLU D . n D 1 103 SER 103 100 100 SER SER D . n D 1 104 ALA 104 101 101 ALA ALA D . n D 1 105 PHE 105 102 102 PHE PHE D . n D 1 106 GLY 106 103 103 GLY GLY D . n D 1 107 ALA 107 104 104 ALA ALA D . n D 1 108 GLN 108 105 105 GLN GLN D . n D 1 109 ASN 109 106 106 ASN ASN D . n D 1 110 LEU 110 107 107 LEU LEU D . n D 1 111 ALA 111 108 108 ALA ALA D . n D 1 112 TRP 112 109 109 TRP TRP D . n D 1 113 SER 113 110 110 SER SER D . n D 1 114 ALA 114 111 111 ALA ALA D . n D 1 115 ALA 115 112 112 ALA ALA D . n D 1 116 PHE 116 113 113 PHE PHE D . n D 1 117 LEU 117 114 114 LEU LEU D . n D 1 118 GLU 118 115 115 GLU GLU D . n D 1 119 GLY 119 116 116 GLY GLY D . n D 1 120 VAL 120 117 117 VAL VAL D . n D 1 121 TYR 121 118 118 TYR TYR D . n D 1 122 GLU 122 119 119 GLU GLU D . n D 1 123 GLN 123 120 120 GLN GLN D . n D 1 124 TRP 124 121 121 TRP TRP D . n D 1 125 PHE 125 122 122 PHE PHE D . n D 1 126 ARG 126 123 123 ARG ARG D . n D 1 127 GLN 127 124 124 GLN GLN D . n D 1 128 LEU 128 125 125 LEU LEU D . n D 1 129 GLY 129 126 126 GLY GLY D . n D 1 130 ALA 130 127 127 ALA ALA D . n D 1 131 SER 131 128 128 SER SER D . n D 1 132 ASP 132 129 129 ASP ASP D . n D 1 133 ALA 133 130 130 ALA ALA D . n D 1 134 LEU 134 131 131 LEU LEU D . n D 1 135 HIS 135 132 132 HIS HIS D . n D 1 136 VAL 136 133 133 VAL VAL D . n D 1 137 ARG 137 134 134 ARG ARG D . n D 1 138 GLN 138 135 135 GLN GLN D . n D 1 139 SER 139 136 136 SER SER D . n D 1 140 GLU 140 137 137 GLU GLU D . n D 1 141 GLU 141 138 138 GLU GLU D . n D 1 142 SER 142 139 139 SER SER D . n D 1 143 ASP 143 140 140 ASP ASP D . n D 1 144 VAL 144 141 141 VAL VAL D . n D 1 145 ARG 145 142 142 ARG ARG D . n D 1 146 LYS 146 143 143 LYS LYS D . n D 1 147 ALA 147 144 144 ALA ALA D . n D 1 148 ILE 148 145 145 ILE ILE D . n D 1 149 VAL 149 146 146 VAL VAL D . n D 1 150 LEU 150 147 147 LEU LEU D . n D 1 151 ARG 151 148 148 ARG ARG D . n D 1 152 LEU 152 149 149 LEU LEU D . n D 1 153 GLY 153 150 150 GLY GLY D . n D 1 154 ARG 154 151 151 ARG ARG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HOH 1 201 4 HOH HOH A . E 2 HOH 2 202 5 HOH HOH A . E 2 HOH 3 203 2 HOH HOH A . E 2 HOH 4 204 1 HOH HOH A . F 2 HOH 1 201 8 HOH HOH B . F 2 HOH 2 202 9 HOH HOH B . F 2 HOH 3 203 10 HOH HOH B . F 2 HOH 4 204 6 HOH HOH B . F 2 HOH 5 205 7 HOH HOH B . G 2 HOH 1 201 14 HOH HOH C . G 2 HOH 2 202 11 HOH HOH C . G 2 HOH 3 203 12 HOH HOH C . H 2 HOH 1 201 19 HOH HOH D . H 2 HOH 2 202 20 HOH HOH D . H 2 HOH 3 203 17 HOH HOH D . H 2 HOH 4 204 16 HOH HOH D . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8PKD _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8PKD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8PKD _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8PKD _struct.title 'Cryo-EM structure of Orrella dioscoreae BcsD' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8PKD _struct_keywords.text 'Bacterial cytoskeleton, bacterial cellulose, bacterial secretion, bacterial biofilms, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A1C3K6W2_9BURK _struct_ref.pdbx_db_accession A0A1C3K6W2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MENPLFDYYRNRQAPLQWRGALGALAQSLTNHFSPEQLRTLLREAGQHFASQHPVQAAETVQSMQDAMNGVWTTQDWGWV DIHDLDSFLTLTHYAAPLESAFGAQNLAWSAAFLEGVYEQWFRQLGASDALHVRQSEESDVRKAIVLRLGR ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8PKD A 4 ? 154 ? A0A1C3K6W2 1 ? 151 ? 1 151 2 1 8PKD B 4 ? 154 ? A0A1C3K6W2 1 ? 151 ? 1 151 3 1 8PKD C 4 ? 154 ? A0A1C3K6W2 1 ? 151 ? 1 151 4 1 8PKD D 4 ? 154 ? A0A1C3K6W2 1 ? 151 ? 1 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8PKD MET A 1 ? UNP A0A1C3K6W2 ? ? 'initiating methionine' -2 1 1 8PKD GLY A 2 ? UNP A0A1C3K6W2 ? ? 'expression tag' -1 2 1 8PKD SER A 3 ? UNP A0A1C3K6W2 ? ? 'expression tag' 0 3 2 8PKD MET B 1 ? UNP A0A1C3K6W2 ? ? 'initiating methionine' -2 4 2 8PKD GLY B 2 ? UNP A0A1C3K6W2 ? ? 'expression tag' -1 5 2 8PKD SER B 3 ? UNP A0A1C3K6W2 ? ? 'expression tag' 0 6 3 8PKD MET C 1 ? UNP A0A1C3K6W2 ? ? 'initiating methionine' -2 7 3 8PKD GLY C 2 ? UNP A0A1C3K6W2 ? ? 'expression tag' -1 8 3 8PKD SER C 3 ? UNP A0A1C3K6W2 ? ? 'expression tag' 0 9 4 8PKD MET D 1 ? UNP A0A1C3K6W2 ? ? 'initiating methionine' -2 10 4 8PKD GLY D 2 ? UNP A0A1C3K6W2 ? ? 'expression tag' -1 11 4 8PKD SER D 3 ? UNP A0A1C3K6W2 ? ? 'expression tag' 0 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 5 ? ARG A 15 ? GLU A 2 ARG A 12 1 ? 11 HELX_P HELX_P2 AA2 TRP A 21 ? PHE A 36 ? TRP A 18 PHE A 33 1 ? 16 HELX_P HELX_P3 AA3 SER A 37 ? HIS A 56 ? SER A 34 HIS A 53 1 ? 20 HELX_P HELX_P4 AA4 THR A 63 ? THR A 77 ? THR A 60 THR A 74 1 ? 15 HELX_P HELX_P5 AA5 PRO A 100 ? GLY A 106 ? PRO A 97 GLY A 103 1 ? 7 HELX_P HELX_P6 AA6 ASN A 109 ? ALA A 114 ? ASN A 106 ALA A 111 1 ? 6 HELX_P HELX_P7 AA7 ALA A 114 ? LEU A 128 ? ALA A 111 LEU A 125 1 ? 15 HELX_P HELX_P8 AA8 ASN B 6 ? ARG B 15 ? ASN B 3 ARG B 12 1 ? 10 HELX_P HELX_P9 AA9 TRP B 21 ? PHE B 36 ? TRP B 18 PHE B 33 1 ? 16 HELX_P HELX_P10 AB1 SER B 37 ? HIS B 56 ? SER B 34 HIS B 53 1 ? 20 HELX_P HELX_P11 AB2 THR B 63 ? THR B 77 ? THR B 60 THR B 74 1 ? 15 HELX_P HELX_P12 AB3 PRO B 100 ? GLY B 106 ? PRO B 97 GLY B 103 1 ? 7 HELX_P HELX_P13 AB4 ASN B 109 ? ALA B 114 ? ASN B 106 ALA B 111 1 ? 6 HELX_P HELX_P14 AB5 ALA B 114 ? LEU B 128 ? ALA B 111 LEU B 125 1 ? 15 HELX_P HELX_P15 AB6 ASN C 6 ? ARG C 15 ? ASN C 3 ARG C 12 1 ? 10 HELX_P HELX_P16 AB7 TRP C 21 ? PHE C 36 ? TRP C 18 PHE C 33 1 ? 16 HELX_P HELX_P17 AB8 SER C 37 ? HIS C 56 ? SER C 34 HIS C 53 1 ? 20 HELX_P HELX_P18 AB9 THR C 63 ? THR C 77 ? THR C 60 THR C 74 1 ? 15 HELX_P HELX_P19 AC1 PRO C 100 ? GLY C 106 ? PRO C 97 GLY C 103 1 ? 7 HELX_P HELX_P20 AC2 ASN C 109 ? ALA C 114 ? ASN C 106 ALA C 111 1 ? 6 HELX_P HELX_P21 AC3 ALA C 114 ? LEU C 128 ? ALA C 111 LEU C 125 1 ? 15 HELX_P HELX_P22 AC4 ASN D 6 ? ARG D 15 ? ASN D 3 ARG D 12 1 ? 10 HELX_P HELX_P23 AC5 TRP D 21 ? PHE D 36 ? TRP D 18 PHE D 33 1 ? 16 HELX_P HELX_P24 AC6 SER D 37 ? HIS D 56 ? SER D 34 HIS D 53 1 ? 20 HELX_P HELX_P25 AC7 THR D 63 ? THR D 77 ? THR D 60 THR D 74 1 ? 15 HELX_P HELX_P26 AC8 PRO D 100 ? GLY D 106 ? PRO D 97 GLY D 103 1 ? 7 HELX_P HELX_P27 AC9 ASN D 109 ? ALA D 114 ? ASN D 106 ALA D 111 1 ? 6 HELX_P HELX_P28 AD1 ALA D 114 ? LEU D 128 ? ALA D 111 LEU D 125 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 82 ? LEU A 88 ? TRP A 79 LEU A 85 AA1 2 PHE A 91 ? TYR A 97 ? PHE A 88 TYR A 94 AA1 3 ILE A 148 ? GLY A 153 ? ILE A 145 GLY A 150 AA1 4 HIS A 135 ? GLN A 138 ? HIS A 132 GLN A 135 AA2 1 TRP B 82 ? LEU B 88 ? TRP B 79 LEU B 85 AA2 2 PHE B 91 ? TYR B 97 ? PHE B 88 TYR B 94 AA2 3 ILE B 148 ? GLY B 153 ? ILE B 145 GLY B 150 AA2 4 HIS B 135 ? GLN B 138 ? HIS B 132 GLN B 135 AA3 1 TRP C 82 ? LEU C 88 ? TRP C 79 LEU C 85 AA3 2 PHE C 91 ? TYR C 97 ? PHE C 88 TYR C 94 AA3 3 ILE C 148 ? GLY C 153 ? ILE C 145 GLY C 150 AA3 4 HIS C 135 ? GLN C 138 ? HIS C 132 GLN C 135 AA4 1 TRP D 82 ? LEU D 88 ? TRP D 79 LEU D 85 AA4 2 PHE D 91 ? TYR D 97 ? PHE D 88 TYR D 94 AA4 3 ILE D 148 ? GLY D 153 ? ILE D 145 GLY D 150 AA4 4 HIS D 135 ? GLN D 138 ? HIS D 132 GLN D 135 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP A 82 ? N TRP A 79 O TYR A 97 ? O TYR A 94 AA1 2 3 N HIS A 96 ? N HIS A 93 O ILE A 148 ? O ILE A 145 AA1 3 4 O GLY A 153 ? O GLY A 150 N HIS A 135 ? N HIS A 132 AA2 1 2 N TRP B 82 ? N TRP B 79 O TYR B 97 ? O TYR B 94 AA2 2 3 N HIS B 96 ? N HIS B 93 O ILE B 148 ? O ILE B 145 AA2 3 4 O GLY B 153 ? O GLY B 150 N HIS B 135 ? N HIS B 132 AA3 1 2 N TRP C 82 ? N TRP C 79 O TYR C 97 ? O TYR C 94 AA3 2 3 N HIS C 96 ? N HIS C 93 O ILE C 148 ? O ILE C 145 AA3 3 4 O GLY C 153 ? O GLY C 150 N HIS C 135 ? N HIS C 132 AA4 1 2 N TRP D 82 ? N TRP D 79 O TYR D 97 ? O TYR D 94 AA4 2 3 N HIS D 96 ? N HIS D 93 O ILE D 148 ? O ILE D 145 AA4 3 4 O GLY D 153 ? O GLY D 150 N HIS D 135 ? N HIS D 132 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 86 ? ? 54.11 -97.23 2 1 ASP B 86 ? ? 53.35 -97.74 3 1 ASP C 86 ? ? 53.82 -97.82 4 1 ASP D 86 ? ? 53.47 -97.33 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8PKD _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details 'Iterative model building and refinement in Coot, Namdinator and Phenix.' _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol OTHER # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code ? _em_3d_fitting_list.initial_refinement_model_id ? # _em_3d_reconstruction.entry_id 8PKD _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details 'All refinements (heterorefinement and non-uniform refinement performed in cryoSPARC)' _em_3d_reconstruction.resolution 2.33 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 2032604 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '100 mM NaCl, 20 mM HEPES pH 8.0' _em_buffer.pH 8 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Orrella dioscoreae BcsD' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8PKD _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 400 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8PKD _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8PKD _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8PKD _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry D2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -2 ? A MET 1 2 1 Y 1 A GLY -1 ? A GLY 2 3 1 Y 1 A SER 0 ? A SER 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 B MET -2 ? B MET 1 6 1 Y 1 B GLY -1 ? B GLY 2 7 1 Y 1 B SER 0 ? B SER 3 8 1 Y 1 B MET 1 ? B MET 4 9 1 Y 1 C MET -2 ? C MET 1 10 1 Y 1 C GLY -1 ? C GLY 2 11 1 Y 1 C SER 0 ? C SER 3 12 1 Y 1 C MET 1 ? C MET 4 13 1 Y 1 D MET -2 ? D MET 1 14 1 Y 1 D GLY -1 ? D GLY 2 15 1 Y 1 D SER 0 ? D SER 3 16 1 Y 1 D MET 1 ? D MET 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.0697 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 1851544 _em_entity_assembly_naturalsource.organism 'Orrella dioscoreae' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid pRSF-Duet1 _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 51.6 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 19118 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.energyfilter_name 'GIF Quantum LS' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 6563631 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? Gctf ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? cryoSPARC ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC ? CLASSIFICATION ? 11 1 ? ? ? ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX ? # _em_specimen.concentration 2 _em_specimen.details 'The sample was monodispersed, size-exclusion purified protein.' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'European Research Council (ERC)' _pdbx_audit_support.country 'European Union' _pdbx_audit_support.grant_number 757507 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? # _atom_sites.entry_id 8PKD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_