data_8PMN # _entry.id 8PMN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8PMN pdb_00008pmn 10.2210/pdb8pmn/pdb WWPDB D_1292131577 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-07-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8PMN _pdbx_database_status.recvd_initial_deposition_date 2023-06-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 8PMF _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email ajt208@cam.ac.uk _pdbx_contact_author.name_first Jussi _pdbx_contact_author.name_last Taipale _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4204-0951 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Morgunova, E.' 1 0000-0002-7754-9021 'Popov, A.' 2 0000-0002-3058-8912 'Yin, Y.' 3 0000-0002-5454-608X 'Taipale, J.' 4 0000-0003-4204-0951 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'transcription factor BARHL2 bound to DNA sequences' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morgunova, E.' 1 0000-0002-7754-9021 primary 'Popov, A.' 2 0000-0002-3058-8912 primary 'Yin, Y.' 3 0000-0002-5454-608X primary 'Taipale, J.' 4 0000-0003-4204-0951 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn DNA 3662.404 1 ? ? ? ? 2 polymer man 'BarH-like 2 homeobox protein' 7509.488 1 ? ? ? ? 3 polymer syn DNA 3662.404 1 ? ? ? ? 4 water nat water 18.015 268 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DG)(DC)(DT)(DA)(DA)(DA)(DC)(DG)(DG)(DT)(DT)' CGCTAAACGGTT B ? 2 'polypeptide(L)' no no PRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAV PRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAV A ? 3 polydeoxyribonucleotide no no '(DA)(DA)(DC)(DC)(DG)(DT)(DT)(DT)(DA)(DG)(DC)(DG)' AACCGTTTAGCG D ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DT n 1 5 DA n 1 6 DA n 1 7 DA n 1 8 DC n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DT n 2 1 PRO n 2 2 ARG n 2 3 LYS n 2 4 ALA n 2 5 ARG n 2 6 THR n 2 7 ALA n 2 8 PHE n 2 9 SER n 2 10 ASP n 2 11 HIS n 2 12 GLN n 2 13 LEU n 2 14 ASN n 2 15 GLN n 2 16 LEU n 2 17 GLU n 2 18 ARG n 2 19 SER n 2 20 PHE n 2 21 GLU n 2 22 ARG n 2 23 GLN n 2 24 LYS n 2 25 TYR n 2 26 LEU n 2 27 SER n 2 28 VAL n 2 29 GLN n 2 30 ASP n 2 31 ARG n 2 32 MET n 2 33 ASP n 2 34 LEU n 2 35 ALA n 2 36 ALA n 2 37 ALA n 2 38 LEU n 2 39 ASN n 2 40 LEU n 2 41 THR n 2 42 ASP n 2 43 THR n 2 44 GLN n 2 45 VAL n 2 46 LYS n 2 47 THR n 2 48 TRP n 2 49 TYR n 2 50 GLN n 2 51 ASN n 2 52 ARG n 2 53 ARG n 2 54 THR n 2 55 LYS n 2 56 TRP n 2 57 LYS n 2 58 ARG n 2 59 GLN n 2 60 THR n 2 61 ALA n 2 62 VAL n 3 1 DA n 3 2 DA n 3 3 DC n 3 4 DC n 3 5 DG n 3 6 DT n 3 7 DT n 3 8 DT n 3 9 DA n 3 10 DG n 3 11 DC n 3 12 DG n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 62 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BARHL2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details vector _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET20A-SBP _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 12 'Homo sapiens' ? 9606 ? 3 1 sample 1 12 'Homo sapiens' ? 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC B . n A 1 2 DG 2 2 2 DG DG B . n A 1 3 DC 3 3 3 DC DC B . n A 1 4 DT 4 4 4 DT DT B . n A 1 5 DA 5 5 5 DA DA B . n A 1 6 DA 6 6 6 DA DA B . n A 1 7 DA 7 7 7 DA DA B . n A 1 8 DC 8 8 8 DC DC B . n A 1 9 DG 9 9 9 DG DG B . n A 1 10 DG 10 10 10 DG DG B . n A 1 11 DT 11 11 11 DT DT B . n A 1 12 DT 12 12 12 DT DT B . n B 2 1 PRO 1 232 232 PRO PRO A . n B 2 2 ARG 2 233 233 ARG ARG A . n B 2 3 LYS 3 234 234 LYS LYS A . n B 2 4 ALA 4 235 235 ALA ALA A . n B 2 5 ARG 5 236 236 ARG ARG A . n B 2 6 THR 6 237 237 THR THR A . n B 2 7 ALA 7 238 238 ALA ALA A . n B 2 8 PHE 8 239 239 PHE PHE A . n B 2 9 SER 9 240 240 SER SER A . n B 2 10 ASP 10 241 241 ASP ASP A . n B 2 11 HIS 11 242 242 HIS HIS A . n B 2 12 GLN 12 243 243 GLN GLN A . n B 2 13 LEU 13 244 244 LEU LEU A . n B 2 14 ASN 14 245 245 ASN ASN A . n B 2 15 GLN 15 246 246 GLN GLN A . n B 2 16 LEU 16 247 247 LEU LEU A . n B 2 17 GLU 17 248 248 GLU GLU A . n B 2 18 ARG 18 249 249 ARG ARG A . n B 2 19 SER 19 250 250 SER SER A . n B 2 20 PHE 20 251 251 PHE PHE A . n B 2 21 GLU 21 252 252 GLU GLU A . n B 2 22 ARG 22 253 253 ARG ARG A . n B 2 23 GLN 23 254 254 GLN GLN A . n B 2 24 LYS 24 255 255 LYS LYS A . n B 2 25 TYR 25 256 256 TYR TYR A . n B 2 26 LEU 26 257 257 LEU LEU A . n B 2 27 SER 27 258 258 SER SER A . n B 2 28 VAL 28 259 259 VAL VAL A . n B 2 29 GLN 29 260 260 GLN GLN A . n B 2 30 ASP 30 261 261 ASP ASP A . n B 2 31 ARG 31 262 262 ARG ARG A . n B 2 32 MET 32 263 263 MET MET A . n B 2 33 ASP 33 264 264 ASP ASP A . n B 2 34 LEU 34 265 265 LEU LEU A . n B 2 35 ALA 35 266 266 ALA ALA A . n B 2 36 ALA 36 267 267 ALA ALA A . n B 2 37 ALA 37 268 268 ALA ALA A . n B 2 38 LEU 38 269 269 LEU LEU A . n B 2 39 ASN 39 270 270 ASN ASN A . n B 2 40 LEU 40 271 271 LEU LEU A . n B 2 41 THR 41 272 272 THR THR A . n B 2 42 ASP 42 273 273 ASP ASP A . n B 2 43 THR 43 274 274 THR THR A . n B 2 44 GLN 44 275 275 GLN GLN A . n B 2 45 VAL 45 276 276 VAL VAL A . n B 2 46 LYS 46 277 277 LYS LYS A . n B 2 47 THR 47 278 278 THR THR A . n B 2 48 TRP 48 279 279 TRP TRP A . n B 2 49 TYR 49 280 280 TYR TYR A . n B 2 50 GLN 50 281 281 GLN GLN A . n B 2 51 ASN 51 282 282 ASN ASN A . n B 2 52 ARG 52 283 283 ARG ARG A . n B 2 53 ARG 53 284 284 ARG ARG A . n B 2 54 THR 54 285 285 THR THR A . n B 2 55 LYS 55 286 286 LYS LYS A . n B 2 56 TRP 56 287 287 TRP TRP A . n B 2 57 LYS 57 288 288 LYS LYS A . n B 2 58 ARG 58 289 289 ARG ARG A . n B 2 59 GLN 59 290 290 GLN GLN A . n B 2 60 THR 60 291 291 THR THR A . n B 2 61 ALA 61 292 292 ALA ALA A . n B 2 62 VAL 62 293 293 VAL VAL A . n C 3 1 DA 1 1 1 DA DA D . n C 3 2 DA 2 2 2 DA DA D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DC 4 4 4 DC DC D . n C 3 5 DG 5 5 5 DG DG D . n C 3 6 DT 6 6 6 DT DT D . n C 3 7 DT 7 7 7 DT DT D . n C 3 8 DT 8 8 8 DT DT D . n C 3 9 DA 9 9 9 DA DA D . n C 3 10 DG 10 10 10 DG DG D . n C 3 11 DC 11 11 11 DC DC D . n C 3 12 DG 12 12 12 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 101 2 HOH HOH B . D 4 HOH 2 102 112 HOH HOH B . D 4 HOH 3 103 221 HOH HOH B . D 4 HOH 4 104 153 HOH HOH B . D 4 HOH 5 105 146 HOH HOH B . D 4 HOH 6 106 214 HOH HOH B . D 4 HOH 7 107 253 HOH HOH B . D 4 HOH 8 108 36 HOH HOH B . D 4 HOH 9 109 251 HOH HOH B . D 4 HOH 10 110 206 HOH HOH B . D 4 HOH 11 111 124 HOH HOH B . D 4 HOH 12 112 10 HOH HOH B . D 4 HOH 13 113 96 HOH HOH B . D 4 HOH 14 114 67 HOH HOH B . D 4 HOH 15 115 23 HOH HOH B . D 4 HOH 16 116 8 HOH HOH B . D 4 HOH 17 117 24 HOH HOH B . D 4 HOH 18 118 34 HOH HOH B . D 4 HOH 19 119 102 HOH HOH B . D 4 HOH 20 120 5 HOH HOH B . D 4 HOH 21 121 145 HOH HOH B . D 4 HOH 22 122 37 HOH HOH B . D 4 HOH 23 123 21 HOH HOH B . D 4 HOH 24 124 42 HOH HOH B . D 4 HOH 25 125 114 HOH HOH B . D 4 HOH 26 126 195 HOH HOH B . D 4 HOH 27 127 33 HOH HOH B . D 4 HOH 28 128 47 HOH HOH B . D 4 HOH 29 129 171 HOH HOH B . D 4 HOH 30 130 3 HOH HOH B . D 4 HOH 31 131 127 HOH HOH B . D 4 HOH 32 132 4 HOH HOH B . D 4 HOH 33 133 192 HOH HOH B . D 4 HOH 34 134 85 HOH HOH B . D 4 HOH 35 135 176 HOH HOH B . D 4 HOH 36 136 44 HOH HOH B . D 4 HOH 37 137 38 HOH HOH B . D 4 HOH 38 138 130 HOH HOH B . D 4 HOH 39 139 30 HOH HOH B . D 4 HOH 40 140 160 HOH HOH B . D 4 HOH 41 141 91 HOH HOH B . D 4 HOH 42 142 202 HOH HOH B . D 4 HOH 43 143 62 HOH HOH B . D 4 HOH 44 144 35 HOH HOH B . D 4 HOH 45 145 256 HOH HOH B . D 4 HOH 46 146 200 HOH HOH B . D 4 HOH 47 147 72 HOH HOH B . D 4 HOH 48 148 60 HOH HOH B . D 4 HOH 49 149 198 HOH HOH B . D 4 HOH 50 150 219 HOH HOH B . D 4 HOH 51 151 220 HOH HOH B . D 4 HOH 52 152 169 HOH HOH B . D 4 HOH 53 153 136 HOH HOH B . D 4 HOH 54 154 236 HOH HOH B . D 4 HOH 55 155 185 HOH HOH B . D 4 HOH 56 156 116 HOH HOH B . D 4 HOH 57 157 196 HOH HOH B . D 4 HOH 58 158 211 HOH HOH B . D 4 HOH 59 159 232 HOH HOH B . D 4 HOH 60 160 244 HOH HOH B . D 4 HOH 61 161 32 HOH HOH B . D 4 HOH 62 162 71 HOH HOH B . D 4 HOH 63 163 155 HOH HOH B . E 4 HOH 1 301 207 HOH HOH A . E 4 HOH 2 302 249 HOH HOH A . E 4 HOH 3 303 259 HOH HOH A . E 4 HOH 4 304 74 HOH HOH A . E 4 HOH 5 305 138 HOH HOH A . E 4 HOH 6 306 140 HOH HOH A . E 4 HOH 7 307 243 HOH HOH A . E 4 HOH 8 308 150 HOH HOH A . E 4 HOH 9 309 242 HOH HOH A . E 4 HOH 10 310 48 HOH HOH A . E 4 HOH 11 311 205 HOH HOH A . E 4 HOH 12 312 174 HOH HOH A . E 4 HOH 13 313 257 HOH HOH A . E 4 HOH 14 314 168 HOH HOH A . E 4 HOH 15 315 52 HOH HOH A . E 4 HOH 16 316 208 HOH HOH A . E 4 HOH 17 317 28 HOH HOH A . E 4 HOH 18 318 144 HOH HOH A . E 4 HOH 19 319 99 HOH HOH A . E 4 HOH 20 320 49 HOH HOH A . E 4 HOH 21 321 135 HOH HOH A . E 4 HOH 22 322 237 HOH HOH A . E 4 HOH 23 323 61 HOH HOH A . E 4 HOH 24 324 139 HOH HOH A . E 4 HOH 25 325 65 HOH HOH A . E 4 HOH 26 326 14 HOH HOH A . E 4 HOH 27 327 22 HOH HOH A . E 4 HOH 28 328 69 HOH HOH A . E 4 HOH 29 329 46 HOH HOH A . E 4 HOH 30 330 18 HOH HOH A . E 4 HOH 31 331 151 HOH HOH A . E 4 HOH 32 332 55 HOH HOH A . E 4 HOH 33 333 157 HOH HOH A . E 4 HOH 34 334 27 HOH HOH A . E 4 HOH 35 335 20 HOH HOH A . E 4 HOH 36 336 83 HOH HOH A . E 4 HOH 37 337 79 HOH HOH A . E 4 HOH 38 338 97 HOH HOH A . E 4 HOH 39 339 53 HOH HOH A . E 4 HOH 40 340 137 HOH HOH A . E 4 HOH 41 341 89 HOH HOH A . E 4 HOH 42 342 87 HOH HOH A . E 4 HOH 43 343 110 HOH HOH A . E 4 HOH 44 344 147 HOH HOH A . E 4 HOH 45 345 179 HOH HOH A . E 4 HOH 46 346 86 HOH HOH A . E 4 HOH 47 347 189 HOH HOH A . E 4 HOH 48 348 84 HOH HOH A . E 4 HOH 49 349 142 HOH HOH A . E 4 HOH 50 350 247 HOH HOH A . E 4 HOH 51 351 103 HOH HOH A . E 4 HOH 52 352 107 HOH HOH A . E 4 HOH 53 353 229 HOH HOH A . E 4 HOH 54 354 68 HOH HOH A . E 4 HOH 55 355 184 HOH HOH A . E 4 HOH 56 356 80 HOH HOH A . E 4 HOH 57 357 182 HOH HOH A . E 4 HOH 58 358 41 HOH HOH A . E 4 HOH 59 359 94 HOH HOH A . E 4 HOH 60 360 98 HOH HOH A . E 4 HOH 61 361 15 HOH HOH A . E 4 HOH 62 362 29 HOH HOH A . E 4 HOH 63 363 131 HOH HOH A . E 4 HOH 64 364 39 HOH HOH A . E 4 HOH 65 365 162 HOH HOH A . E 4 HOH 66 366 11 HOH HOH A . E 4 HOH 67 367 172 HOH HOH A . E 4 HOH 68 368 66 HOH HOH A . E 4 HOH 69 369 73 HOH HOH A . E 4 HOH 70 370 109 HOH HOH A . E 4 HOH 71 371 231 HOH HOH A . E 4 HOH 72 372 166 HOH HOH A . E 4 HOH 73 373 241 HOH HOH A . E 4 HOH 74 374 93 HOH HOH A . E 4 HOH 75 375 113 HOH HOH A . E 4 HOH 76 376 246 HOH HOH A . E 4 HOH 77 377 111 HOH HOH A . E 4 HOH 78 378 261 HOH HOH A . E 4 HOH 79 379 215 HOH HOH A . E 4 HOH 80 380 193 HOH HOH A . E 4 HOH 81 381 143 HOH HOH A . E 4 HOH 82 382 117 HOH HOH A . E 4 HOH 83 383 266 HOH HOH A . E 4 HOH 84 384 77 HOH HOH A . E 4 HOH 85 385 238 HOH HOH A . E 4 HOH 86 386 82 HOH HOH A . E 4 HOH 87 387 262 HOH HOH A . E 4 HOH 88 388 225 HOH HOH A . E 4 HOH 89 389 203 HOH HOH A . E 4 HOH 90 390 267 HOH HOH A . E 4 HOH 91 391 180 HOH HOH A . E 4 HOH 92 392 263 HOH HOH A . E 4 HOH 93 393 106 HOH HOH A . E 4 HOH 94 394 125 HOH HOH A . E 4 HOH 95 395 188 HOH HOH A . E 4 HOH 96 396 222 HOH HOH A . E 4 HOH 97 397 163 HOH HOH A . E 4 HOH 98 398 120 HOH HOH A . E 4 HOH 99 399 133 HOH HOH A . E 4 HOH 100 400 105 HOH HOH A . E 4 HOH 101 401 210 HOH HOH A . E 4 HOH 102 402 239 HOH HOH A . E 4 HOH 103 403 217 HOH HOH A . E 4 HOH 104 404 95 HOH HOH A . E 4 HOH 105 405 170 HOH HOH A . E 4 HOH 106 406 230 HOH HOH A . E 4 HOH 107 407 158 HOH HOH A . E 4 HOH 108 408 228 HOH HOH A . E 4 HOH 109 409 213 HOH HOH A . E 4 HOH 110 410 177 HOH HOH A . E 4 HOH 111 411 129 HOH HOH A . E 4 HOH 112 412 123 HOH HOH A . E 4 HOH 113 413 245 HOH HOH A . E 4 HOH 114 414 197 HOH HOH A . E 4 HOH 115 415 122 HOH HOH A . E 4 HOH 116 416 248 HOH HOH A . E 4 HOH 117 417 250 HOH HOH A . E 4 HOH 118 418 149 HOH HOH A . E 4 HOH 119 419 216 HOH HOH A . E 4 HOH 120 420 227 HOH HOH A . E 4 HOH 121 421 268 HOH HOH A . E 4 HOH 122 422 233 HOH HOH A . E 4 HOH 123 423 81 HOH HOH A . E 4 HOH 124 424 226 HOH HOH A . E 4 HOH 125 425 70 HOH HOH A . E 4 HOH 126 426 258 HOH HOH A . E 4 HOH 127 427 167 HOH HOH A . E 4 HOH 128 428 9 HOH HOH A . F 4 HOH 1 101 178 HOH HOH D . F 4 HOH 2 102 101 HOH HOH D . F 4 HOH 3 103 218 HOH HOH D . F 4 HOH 4 104 148 HOH HOH D . F 4 HOH 5 105 265 HOH HOH D . F 4 HOH 6 106 156 HOH HOH D . F 4 HOH 7 107 40 HOH HOH D . F 4 HOH 8 108 141 HOH HOH D . F 4 HOH 9 109 255 HOH HOH D . F 4 HOH 10 110 56 HOH HOH D . F 4 HOH 11 111 25 HOH HOH D . F 4 HOH 12 112 64 HOH HOH D . F 4 HOH 13 113 134 HOH HOH D . F 4 HOH 14 114 108 HOH HOH D . F 4 HOH 15 115 254 HOH HOH D . F 4 HOH 16 116 121 HOH HOH D . F 4 HOH 17 117 1 HOH HOH D . F 4 HOH 18 118 260 HOH HOH D . F 4 HOH 19 119 201 HOH HOH D . F 4 HOH 20 120 88 HOH HOH D . F 4 HOH 21 121 104 HOH HOH D . F 4 HOH 22 122 12 HOH HOH D . F 4 HOH 23 123 154 HOH HOH D . F 4 HOH 24 124 234 HOH HOH D . F 4 HOH 25 125 173 HOH HOH D . F 4 HOH 26 126 45 HOH HOH D . F 4 HOH 27 127 43 HOH HOH D . F 4 HOH 28 128 16 HOH HOH D . F 4 HOH 29 129 17 HOH HOH D . F 4 HOH 30 130 90 HOH HOH D . F 4 HOH 31 131 224 HOH HOH D . F 4 HOH 32 132 6 HOH HOH D . F 4 HOH 33 133 128 HOH HOH D . F 4 HOH 34 134 119 HOH HOH D . F 4 HOH 35 135 118 HOH HOH D . F 4 HOH 36 136 63 HOH HOH D . F 4 HOH 37 137 7 HOH HOH D . F 4 HOH 38 138 75 HOH HOH D . F 4 HOH 39 139 183 HOH HOH D . F 4 HOH 40 140 26 HOH HOH D . F 4 HOH 41 141 50 HOH HOH D . F 4 HOH 42 142 54 HOH HOH D . F 4 HOH 43 143 115 HOH HOH D . F 4 HOH 44 144 126 HOH HOH D . F 4 HOH 45 145 31 HOH HOH D . F 4 HOH 46 146 13 HOH HOH D . F 4 HOH 47 147 76 HOH HOH D . F 4 HOH 48 148 100 HOH HOH D . F 4 HOH 49 149 159 HOH HOH D . F 4 HOH 50 150 186 HOH HOH D . F 4 HOH 51 151 191 HOH HOH D . F 4 HOH 52 152 161 HOH HOH D . F 4 HOH 53 153 204 HOH HOH D . F 4 HOH 54 154 194 HOH HOH D . F 4 HOH 55 155 199 HOH HOH D . F 4 HOH 56 156 164 HOH HOH D . F 4 HOH 57 157 209 HOH HOH D . F 4 HOH 58 158 132 HOH HOH D . F 4 HOH 59 159 264 HOH HOH D . F 4 HOH 60 160 165 HOH HOH D . F 4 HOH 61 161 152 HOH HOH D . F 4 HOH 62 162 190 HOH HOH D . F 4 HOH 63 163 212 HOH HOH D . F 4 HOH 64 164 252 HOH HOH D . F 4 HOH 65 165 59 HOH HOH D . F 4 HOH 66 166 92 HOH HOH D . F 4 HOH 67 167 19 HOH HOH D . F 4 HOH 68 168 78 HOH HOH D . F 4 HOH 69 169 57 HOH HOH D . F 4 HOH 70 170 181 HOH HOH D . F 4 HOH 71 171 175 HOH HOH D . F 4 HOH 72 172 240 HOH HOH D . F 4 HOH 73 173 58 HOH HOH D . F 4 HOH 74 174 223 HOH HOH D . F 4 HOH 75 175 51 HOH HOH D . F 4 HOH 76 176 187 HOH HOH D . F 4 HOH 77 177 235 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8PMN _cell.details ? _cell.formula_units_Z ? _cell.length_a 38.658 _cell.length_a_esd ? _cell.length_b 47.118 _cell.length_b_esd ? _cell.length_c 72.301 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8PMN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8PMN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 4000, sodium malonate, sodium acetate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-05-12 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976260 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.976260 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8PMN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.30 _reflns.d_resolution_low 47.12 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 32926 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.86 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.084 _reflns.pdbx_Rpim_I_all 0.032 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 233390 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.33 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all 9957 _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1518 _reflns_shell.percent_possible_obs 94.8 _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.6 _reflns_shell.pdbx_chi_squared 0.65 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs 0.7 _reflns_shell.pdbx_Rrim_I_all 2.336 _reflns_shell.pdbx_Rpim_I_all 0.883 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.264 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 2.156 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.28 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] 0.39 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -0.11 _refine.B_iso_max ? _refine.B_iso_mean 20.917 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8PMN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.30 _refine.ls_d_res_low 34.11 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31279 _refine.ls_number_reflns_R_free 1583 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.62 _refine.ls_percent_reflns_R_free 4.8 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.18317 _refine.ls_R_factor_R_free 0.21327 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.18169 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.054 _refine.pdbx_overall_ESU_R_Free 0.058 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.144 _refine.overall_SU_ML 0.045 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 34.11 _refine_hist.number_atoms_solvent 268 _refine_hist.number_atoms_total 1283 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 529 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.019 0.015 1124 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.015 804 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.536 1.709 1576 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.339 1.582 1852 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 11.466 5.637 185 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 27.302 19.512 41 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.967 15.000 106 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 20.947 15.000 9 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.213 0.239 187 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.020 0.020 922 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 244 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 0.788 1.246 252 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 0.777 1.246 251 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.132 1.867 315 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.131 1.867 316 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.378 1.340 872 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.378 1.340 872 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.058 2.004 1262 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 3.548 34.163 3907 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 3.547 34.158 3908 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.303 _refine_ls_shell.d_res_low 1.337 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 111 _refine_ls_shell.number_reflns_R_work 2193 _refine_ls_shell.percent_reflns_obs 96.16 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.440 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.485 # _struct.entry_id 8PMN _struct.title 'transcription factor BARHL2 bound to DNA sequences' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8PMN _struct_keywords.text 'homeobox transcription factor BARHL2, DNA-binding domain, complex with DNA, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8PMN 8PMN ? 1 ? 1 2 UNP BARH2_HUMAN Q9NY43 ? 2 PRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAV 232 3 PDB 8PMN 8PMN ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8PMN B 1 ? 12 ? 8PMN 1 ? 12 ? 1 12 2 2 8PMN A 1 ? 62 ? Q9NY43 232 ? 293 ? 232 293 3 3 8PMN D 1 ? 12 ? 8PMN 1 ? 12 ? 1 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3070 ? 1 MORE -13 ? 1 'SSA (A^2)' 7710 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER B 9 ? GLN B 23 ? SER A 240 GLN A 254 1 ? 15 HELX_P HELX_P2 AA2 SER B 27 ? ASN B 39 ? SER A 258 ASN A 270 1 ? 13 HELX_P HELX_P3 AA3 THR B 41 ? ALA B 61 ? THR A 272 ALA A 292 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 12 N1 ? ? B DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 12 O6 ? ? B DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 12 N2 ? ? B DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 C DC 11 N3 ? ? B DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 C DC 11 O2 ? ? B DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 C DC 11 N4 ? ? B DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? B DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N1 ? ? ? 1_555 C DT 8 N3 ? ? B DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 6 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 6 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 C DT 6 N3 ? ? B DA 7 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 C DT 6 O4 ? ? B DA 7 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 8 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 8 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 8 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 9 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 9 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 9 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 11 N3 ? ? ? 1_555 C DA 2 N1 ? ? B DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 11 O4 ? ? ? 1_555 C DA 2 N6 ? ? B DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 12 N3 ? ? ? 1_555 C DA 1 N1 ? ? B DT 12 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 12 O4 ? ? ? 1_555 C DA 1 N6 ? ? B DT 12 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 123 ? ? O B HOH 145 ? ? 1.47 2 1 O A HOH 387 ? ? O A HOH 390 ? ? 1.92 3 1 O D HOH 116 ? ? O D HOH 159 ? ? 1.93 4 1 O A HOH 386 ? ? O A HOH 390 ? ? 1.96 5 1 O A HOH 303 ? ? O A HOH 421 ? ? 2.07 6 1 O B HOH 152 ? ? O B HOH 155 ? ? 2.11 7 1 CD A ARG 289 ? B O A HOH 305 ? ? 2.16 8 1 O B HOH 145 ? ? O D HOH 159 ? ? 2.17 9 1 O B HOH 123 ? ? O A HOH 387 ? ? 2.17 10 1 O B HOH 145 ? ? O A HOH 387 ? ? 2.18 11 1 O A HOH 383 ? ? O A HOH 387 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 301 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 381 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_545 _pdbx_validate_symm_contact.dist 2.08 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 11 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "O5'" _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 11 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.658 _pdbx_validate_rmsd_bond.bond_target_value 1.593 _pdbx_validate_rmsd_bond.bond_deviation 0.065 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.010 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 103.33 108.00 -4.67 0.70 N 2 1 "O5'" B DG 9 ? ? P B DG 9 ? ? OP2 B DG 9 ? ? 89.81 105.70 -15.89 0.90 N 3 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 110.13 108.30 1.83 0.30 N 4 1 "O3'" B DG 10 ? ? P B DT 11 ? ? OP2 B DT 11 ? ? 120.57 110.50 10.07 1.10 Y 5 1 CG A ARG 233 ? ? CD A ARG 233 ? ? NE A ARG 233 ? ? 97.07 111.80 -14.73 2.10 N 6 1 NE A ARG 236 ? ? CZ A ARG 236 ? ? NH1 A ARG 236 ? ? 123.33 120.30 3.03 0.50 N 7 1 "O4'" D DC 4 ? ? "C1'" D DC 4 ? ? N1 D DC 4 ? ? 103.48 108.00 -4.52 0.70 N 8 1 "O3'" D DT 8 ? ? P D DA 9 ? ? OP2 D DA 9 ? ? 118.72 110.50 8.22 1.10 Y # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC D 4 ? ? 0.072 'SIDE CHAIN' 2 1 DG D 10 ? ? 0.050 'SIDE CHAIN' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -10.4421 0.1635 -7.8618 0.0188 ? -0.0168 ? 0.0026 ? 0.0593 ? -0.0011 ? 0.0307 ? 3.7878 ? 0.4925 ? 0.1575 ? 1.6590 ? -0.0676 ? 0.6959 ? -0.1166 ? 0.4594 ? 0.0197 ? -0.1676 ? 0.0767 ? 0.0087 ? 0.0179 ? -0.0296 ? 0.0399 ? 2 'X-RAY DIFFRACTION' ? refined -11.5349 0.4384 5.4071 0.0281 ? -0.0014 ? 0.0046 ? 0.0138 ? -0.0060 ? 0.0094 ? 2.5454 ? 0.8919 ? -0.2262 ? 3.0577 ? 0.7046 ? 1.6299 ? 0.0527 ? -0.1663 ? 0.1137 ? 0.2853 ? -0.0504 ? 0.0709 ? 0.0355 ? -0.0417 ? -0.0023 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? B 1 ? ? ? B 12 ? ? ? 2 'X-RAY DIFFRACTION' 1 ? ? D 1 ? ? ? D 12 ? ? ? 3 'X-RAY DIFFRACTION' 2 ? ? A 232 ? ? ? A 293 ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 HIS N N N N 256 HIS CA C N S 257 HIS C C N N 258 HIS O O N N 259 HIS CB C N N 260 HIS CG C Y N 261 HIS ND1 N Y N 262 HIS CD2 C Y N 263 HIS CE1 C Y N 264 HIS NE2 N Y N 265 HIS OXT O N N 266 HIS H H N N 267 HIS H2 H N N 268 HIS HA H N N 269 HIS HB2 H N N 270 HIS HB3 H N N 271 HIS HD1 H N N 272 HIS HD2 H N N 273 HIS HE1 H N N 274 HIS HE2 H N N 275 HIS HXT H N N 276 HOH O O N N 277 HOH H1 H N N 278 HOH H2 H N N 279 LEU N N N N 280 LEU CA C N S 281 LEU C C N N 282 LEU O O N N 283 LEU CB C N N 284 LEU CG C N N 285 LEU CD1 C N N 286 LEU CD2 C N N 287 LEU OXT O N N 288 LEU H H N N 289 LEU H2 H N N 290 LEU HA H N N 291 LEU HB2 H N N 292 LEU HB3 H N N 293 LEU HG H N N 294 LEU HD11 H N N 295 LEU HD12 H N N 296 LEU HD13 H N N 297 LEU HD21 H N N 298 LEU HD22 H N N 299 LEU HD23 H N N 300 LEU HXT H N N 301 LYS N N N N 302 LYS CA C N S 303 LYS C C N N 304 LYS O O N N 305 LYS CB C N N 306 LYS CG C N N 307 LYS CD C N N 308 LYS CE C N N 309 LYS NZ N N N 310 LYS OXT O N N 311 LYS H H N N 312 LYS H2 H N N 313 LYS HA H N N 314 LYS HB2 H N N 315 LYS HB3 H N N 316 LYS HG2 H N N 317 LYS HG3 H N N 318 LYS HD2 H N N 319 LYS HD3 H N N 320 LYS HE2 H N N 321 LYS HE3 H N N 322 LYS HZ1 H N N 323 LYS HZ2 H N N 324 LYS HZ3 H N N 325 LYS HXT H N N 326 MET N N N N 327 MET CA C N S 328 MET C C N N 329 MET O O N N 330 MET CB C N N 331 MET CG C N N 332 MET SD S N N 333 MET CE C N N 334 MET OXT O N N 335 MET H H N N 336 MET H2 H N N 337 MET HA H N N 338 MET HB2 H N N 339 MET HB3 H N N 340 MET HG2 H N N 341 MET HG3 H N N 342 MET HE1 H N N 343 MET HE2 H N N 344 MET HE3 H N N 345 MET HXT H N N 346 PHE N N N N 347 PHE CA C N S 348 PHE C C N N 349 PHE O O N N 350 PHE CB C N N 351 PHE CG C Y N 352 PHE CD1 C Y N 353 PHE CD2 C Y N 354 PHE CE1 C Y N 355 PHE CE2 C Y N 356 PHE CZ C Y N 357 PHE OXT O N N 358 PHE H H N N 359 PHE H2 H N N 360 PHE HA H N N 361 PHE HB2 H N N 362 PHE HB3 H N N 363 PHE HD1 H N N 364 PHE HD2 H N N 365 PHE HE1 H N N 366 PHE HE2 H N N 367 PHE HZ H N N 368 PHE HXT H N N 369 PRO N N N N 370 PRO CA C N S 371 PRO C C N N 372 PRO O O N N 373 PRO CB C N N 374 PRO CG C N N 375 PRO CD C N N 376 PRO OXT O N N 377 PRO H H N N 378 PRO HA H N N 379 PRO HB2 H N N 380 PRO HB3 H N N 381 PRO HG2 H N N 382 PRO HG3 H N N 383 PRO HD2 H N N 384 PRO HD3 H N N 385 PRO HXT H N N 386 SER N N N N 387 SER CA C N S 388 SER C C N N 389 SER O O N N 390 SER CB C N N 391 SER OG O N N 392 SER OXT O N N 393 SER H H N N 394 SER H2 H N N 395 SER HA H N N 396 SER HB2 H N N 397 SER HB3 H N N 398 SER HG H N N 399 SER HXT H N N 400 THR N N N N 401 THR CA C N S 402 THR C C N N 403 THR O O N N 404 THR CB C N R 405 THR OG1 O N N 406 THR CG2 C N N 407 THR OXT O N N 408 THR H H N N 409 THR H2 H N N 410 THR HA H N N 411 THR HB H N N 412 THR HG1 H N N 413 THR HG21 H N N 414 THR HG22 H N N 415 THR HG23 H N N 416 THR HXT H N N 417 TRP N N N N 418 TRP CA C N S 419 TRP C C N N 420 TRP O O N N 421 TRP CB C N N 422 TRP CG C Y N 423 TRP CD1 C Y N 424 TRP CD2 C Y N 425 TRP NE1 N Y N 426 TRP CE2 C Y N 427 TRP CE3 C Y N 428 TRP CZ2 C Y N 429 TRP CZ3 C Y N 430 TRP CH2 C Y N 431 TRP OXT O N N 432 TRP H H N N 433 TRP H2 H N N 434 TRP HA H N N 435 TRP HB2 H N N 436 TRP HB3 H N N 437 TRP HD1 H N N 438 TRP HE1 H N N 439 TRP HE3 H N N 440 TRP HZ2 H N N 441 TRP HZ3 H N N 442 TRP HH2 H N N 443 TRP HXT H N N 444 TYR N N N N 445 TYR CA C N S 446 TYR C C N N 447 TYR O O N N 448 TYR CB C N N 449 TYR CG C Y N 450 TYR CD1 C Y N 451 TYR CD2 C Y N 452 TYR CE1 C Y N 453 TYR CE2 C Y N 454 TYR CZ C Y N 455 TYR OH O N N 456 TYR OXT O N N 457 TYR H H N N 458 TYR H2 H N N 459 TYR HA H N N 460 TYR HB2 H N N 461 TYR HB3 H N N 462 TYR HD1 H N N 463 TYR HD2 H N N 464 TYR HE1 H N N 465 TYR HE2 H N N 466 TYR HH H N N 467 TYR HXT H N N 468 VAL N N N N 469 VAL CA C N S 470 VAL C C N N 471 VAL O O N N 472 VAL CB C N N 473 VAL CG1 C N N 474 VAL CG2 C N N 475 VAL OXT O N N 476 VAL H H N N 477 VAL H2 H N N 478 VAL HA H N N 479 VAL HB H N N 480 VAL HG11 H N N 481 VAL HG12 H N N 482 VAL HG13 H N N 483 VAL HG21 H N N 484 VAL HG22 H N N 485 VAL HG23 H N N 486 VAL HXT H N N 487 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 HIS N CA sing N N 256 HIS N H sing N N 257 HIS N H2 sing N N 258 HIS CA C sing N N 259 HIS CA CB sing N N 260 HIS CA HA sing N N 261 HIS C O doub N N 262 HIS C OXT sing N N 263 HIS CB CG sing N N 264 HIS CB HB2 sing N N 265 HIS CB HB3 sing N N 266 HIS CG ND1 sing Y N 267 HIS CG CD2 doub Y N 268 HIS ND1 CE1 doub Y N 269 HIS ND1 HD1 sing N N 270 HIS CD2 NE2 sing Y N 271 HIS CD2 HD2 sing N N 272 HIS CE1 NE2 sing Y N 273 HIS CE1 HE1 sing N N 274 HIS NE2 HE2 sing N N 275 HIS OXT HXT sing N N 276 HOH O H1 sing N N 277 HOH O H2 sing N N 278 LEU N CA sing N N 279 LEU N H sing N N 280 LEU N H2 sing N N 281 LEU CA C sing N N 282 LEU CA CB sing N N 283 LEU CA HA sing N N 284 LEU C O doub N N 285 LEU C OXT sing N N 286 LEU CB CG sing N N 287 LEU CB HB2 sing N N 288 LEU CB HB3 sing N N 289 LEU CG CD1 sing N N 290 LEU CG CD2 sing N N 291 LEU CG HG sing N N 292 LEU CD1 HD11 sing N N 293 LEU CD1 HD12 sing N N 294 LEU CD1 HD13 sing N N 295 LEU CD2 HD21 sing N N 296 LEU CD2 HD22 sing N N 297 LEU CD2 HD23 sing N N 298 LEU OXT HXT sing N N 299 LYS N CA sing N N 300 LYS N H sing N N 301 LYS N H2 sing N N 302 LYS CA C sing N N 303 LYS CA CB sing N N 304 LYS CA HA sing N N 305 LYS C O doub N N 306 LYS C OXT sing N N 307 LYS CB CG sing N N 308 LYS CB HB2 sing N N 309 LYS CB HB3 sing N N 310 LYS CG CD sing N N 311 LYS CG HG2 sing N N 312 LYS CG HG3 sing N N 313 LYS CD CE sing N N 314 LYS CD HD2 sing N N 315 LYS CD HD3 sing N N 316 LYS CE NZ sing N N 317 LYS CE HE2 sing N N 318 LYS CE HE3 sing N N 319 LYS NZ HZ1 sing N N 320 LYS NZ HZ2 sing N N 321 LYS NZ HZ3 sing N N 322 LYS OXT HXT sing N N 323 MET N CA sing N N 324 MET N H sing N N 325 MET N H2 sing N N 326 MET CA C sing N N 327 MET CA CB sing N N 328 MET CA HA sing N N 329 MET C O doub N N 330 MET C OXT sing N N 331 MET CB CG sing N N 332 MET CB HB2 sing N N 333 MET CB HB3 sing N N 334 MET CG SD sing N N 335 MET CG HG2 sing N N 336 MET CG HG3 sing N N 337 MET SD CE sing N N 338 MET CE HE1 sing N N 339 MET CE HE2 sing N N 340 MET CE HE3 sing N N 341 MET OXT HXT sing N N 342 PHE N CA sing N N 343 PHE N H sing N N 344 PHE N H2 sing N N 345 PHE CA C sing N N 346 PHE CA CB sing N N 347 PHE CA HA sing N N 348 PHE C O doub N N 349 PHE C OXT sing N N 350 PHE CB CG sing N N 351 PHE CB HB2 sing N N 352 PHE CB HB3 sing N N 353 PHE CG CD1 doub Y N 354 PHE CG CD2 sing Y N 355 PHE CD1 CE1 sing Y N 356 PHE CD1 HD1 sing N N 357 PHE CD2 CE2 doub Y N 358 PHE CD2 HD2 sing N N 359 PHE CE1 CZ doub Y N 360 PHE CE1 HE1 sing N N 361 PHE CE2 CZ sing Y N 362 PHE CE2 HE2 sing N N 363 PHE CZ HZ sing N N 364 PHE OXT HXT sing N N 365 PRO N CA sing N N 366 PRO N CD sing N N 367 PRO N H sing N N 368 PRO CA C sing N N 369 PRO CA CB sing N N 370 PRO CA HA sing N N 371 PRO C O doub N N 372 PRO C OXT sing N N 373 PRO CB CG sing N N 374 PRO CB HB2 sing N N 375 PRO CB HB3 sing N N 376 PRO CG CD sing N N 377 PRO CG HG2 sing N N 378 PRO CG HG3 sing N N 379 PRO CD HD2 sing N N 380 PRO CD HD3 sing N N 381 PRO OXT HXT sing N N 382 SER N CA sing N N 383 SER N H sing N N 384 SER N H2 sing N N 385 SER CA C sing N N 386 SER CA CB sing N N 387 SER CA HA sing N N 388 SER C O doub N N 389 SER C OXT sing N N 390 SER CB OG sing N N 391 SER CB HB2 sing N N 392 SER CB HB3 sing N N 393 SER OG HG sing N N 394 SER OXT HXT sing N N 395 THR N CA sing N N 396 THR N H sing N N 397 THR N H2 sing N N 398 THR CA C sing N N 399 THR CA CB sing N N 400 THR CA HA sing N N 401 THR C O doub N N 402 THR C OXT sing N N 403 THR CB OG1 sing N N 404 THR CB CG2 sing N N 405 THR CB HB sing N N 406 THR OG1 HG1 sing N N 407 THR CG2 HG21 sing N N 408 THR CG2 HG22 sing N N 409 THR CG2 HG23 sing N N 410 THR OXT HXT sing N N 411 TRP N CA sing N N 412 TRP N H sing N N 413 TRP N H2 sing N N 414 TRP CA C sing N N 415 TRP CA CB sing N N 416 TRP CA HA sing N N 417 TRP C O doub N N 418 TRP C OXT sing N N 419 TRP CB CG sing N N 420 TRP CB HB2 sing N N 421 TRP CB HB3 sing N N 422 TRP CG CD1 doub Y N 423 TRP CG CD2 sing Y N 424 TRP CD1 NE1 sing Y N 425 TRP CD1 HD1 sing N N 426 TRP CD2 CE2 doub Y N 427 TRP CD2 CE3 sing Y N 428 TRP NE1 CE2 sing Y N 429 TRP NE1 HE1 sing N N 430 TRP CE2 CZ2 sing Y N 431 TRP CE3 CZ3 doub Y N 432 TRP CE3 HE3 sing N N 433 TRP CZ2 CH2 doub Y N 434 TRP CZ2 HZ2 sing N N 435 TRP CZ3 CH2 sing Y N 436 TRP CZ3 HZ3 sing N N 437 TRP CH2 HH2 sing N N 438 TRP OXT HXT sing N N 439 TYR N CA sing N N 440 TYR N H sing N N 441 TYR N H2 sing N N 442 TYR CA C sing N N 443 TYR CA CB sing N N 444 TYR CA HA sing N N 445 TYR C O doub N N 446 TYR C OXT sing N N 447 TYR CB CG sing N N 448 TYR CB HB2 sing N N 449 TYR CB HB3 sing N N 450 TYR CG CD1 doub Y N 451 TYR CG CD2 sing Y N 452 TYR CD1 CE1 sing Y N 453 TYR CD1 HD1 sing N N 454 TYR CD2 CE2 doub Y N 455 TYR CD2 HD2 sing N N 456 TYR CE1 CZ doub Y N 457 TYR CE1 HE1 sing N N 458 TYR CE2 CZ sing Y N 459 TYR CE2 HE2 sing N N 460 TYR CZ OH sing N N 461 TYR OH HH sing N N 462 TYR OXT HXT sing N N 463 VAL N CA sing N N 464 VAL N H sing N N 465 VAL N H2 sing N N 466 VAL CA C sing N N 467 VAL CA CB sing N N 468 VAL CA HA sing N N 469 VAL C O doub N N 470 VAL C OXT sing N N 471 VAL CB CG1 sing N N 472 VAL CB CG2 sing N N 473 VAL CB HB sing N N 474 VAL CG1 HG11 sing N N 475 VAL CG1 HG12 sing N N 476 VAL CG1 HG13 sing N N 477 VAL CG2 HG21 sing N N 478 VAL CG2 HG22 sing N N 479 VAL CG2 HG23 sing N N 480 VAL OXT HXT sing N N 481 # _ndb_struct_conf_na.entry_id 8PMN _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 12 1_555 0.085 -0.073 0.109 1.698 -10.881 -0.560 1 B_DC1:DG12_D B 1 ? D 12 ? 19 1 1 A DG 2 1_555 C DC 11 1_555 -0.347 -0.145 0.059 0.523 -4.142 0.086 2 B_DG2:DC11_D B 2 ? D 11 ? 19 1 1 A DC 3 1_555 C DG 10 1_555 0.114 -0.084 -0.065 6.757 -3.555 -0.697 3 B_DC3:DG10_D B 3 ? D 10 ? 19 1 1 A DT 4 1_555 C DA 9 1_555 0.016 -0.123 -0.232 6.581 -10.090 6.667 4 B_DT4:DA9_D B 4 ? D 9 ? 20 1 1 A DA 5 1_555 C DT 8 1_555 -0.088 -0.167 -0.166 -2.437 -11.575 1.668 5 B_DA5:DT8_D B 5 ? D 8 ? 20 1 1 A DA 6 1_555 C DT 7 1_555 0.108 -0.083 0.009 0.925 -13.193 5.561 6 B_DA6:DT7_D B 6 ? D 7 ? 20 1 1 A DA 7 1_555 C DT 6 1_555 -0.114 -0.122 0.074 -0.565 -14.666 2.812 7 B_DA7:DT6_D B 7 ? D 6 ? 20 1 1 A DC 8 1_555 C DG 5 1_555 0.275 -0.179 0.070 -0.764 -16.610 -0.355 8 B_DC8:DG5_D B 8 ? D 5 ? 19 1 1 A DG 9 1_555 C DC 4 1_555 -0.143 -0.142 0.096 2.993 -12.108 -1.099 9 B_DG9:DC4_D B 9 ? D 4 ? 19 1 1 A DG 10 1_555 C DC 3 1_555 -0.150 -0.063 -0.122 -11.881 -21.801 0.866 10 B_DG10:DC3_D B 10 ? D 3 ? 19 1 1 A DT 11 1_555 C DA 2 1_555 0.003 -0.059 0.237 -15.413 -11.808 -0.739 11 B_DT11:DA2_D B 11 ? D 2 ? 20 1 1 A DT 12 1_555 C DA 1 1_555 -0.077 -0.068 0.162 -13.775 -7.787 -1.461 12 B_DT12:DA1_D B 12 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 12 1_555 A DG 2 1_555 C DC 11 1_555 0.781 1.126 3.338 2.014 4.298 38.355 1.148 -0.921 3.474 6.511 -3.051 38.636 1 BB_DC1DG2:DC11DG12_DD B 1 ? D 12 ? B 2 ? D 11 ? 1 A DG 2 1_555 C DC 11 1_555 A DC 3 1_555 C DG 10 1_555 0.053 0.122 3.137 0.583 3.575 29.686 -0.476 0.013 3.130 6.946 -1.133 29.901 2 BB_DG2DC3:DG10DC11_DD B 2 ? D 11 ? B 3 ? D 10 ? 1 A DC 3 1_555 C DG 10 1_555 A DT 4 1_555 C DA 9 1_555 1.812 0.284 3.136 7.094 10.458 33.411 -1.098 -1.899 3.375 17.434 -11.826 35.657 3 BB_DC3DT4:DA9DG10_DD B 3 ? D 10 ? B 4 ? D 9 ? 1 A DT 4 1_555 C DA 9 1_555 A DA 5 1_555 C DT 8 1_555 -1.264 0.457 3.419 -3.366 5.717 39.415 -0.035 1.436 3.540 8.404 4.948 39.948 4 BB_DT4DA5:DT8DA9_DD B 4 ? D 9 ? B 5 ? D 8 ? 1 A DA 5 1_555 C DT 8 1_555 A DA 6 1_555 C DT 7 1_555 0.155 -0.310 3.106 -0.924 1.223 36.100 -0.663 -0.373 3.089 1.972 1.489 36.132 5 BB_DA5DA6:DT7DT8_DD B 5 ? D 8 ? B 6 ? D 7 ? 1 A DA 6 1_555 C DT 7 1_555 A DA 7 1_555 C DT 6 1_555 -0.511 -0.627 3.165 -3.191 1.266 35.823 -1.191 0.386 3.174 2.052 5.174 35.982 6 BB_DA6DA7:DT6DT7_DD B 6 ? D 7 ? B 7 ? D 6 ? 1 A DA 7 1_555 C DT 6 1_555 A DC 8 1_555 C DG 5 1_555 -0.872 -0.611 3.152 -1.291 0.462 33.408 -1.136 1.309 3.174 0.803 2.245 33.435 7 BB_DA7DC8:DG5DT6_DD B 7 ? D 6 ? B 8 ? D 5 ? 1 A DC 8 1_555 C DG 5 1_555 A DG 9 1_555 C DC 4 1_555 0.102 0.433 3.207 1.114 8.957 28.810 -0.996 0.031 3.196 17.468 -2.173 30.162 8 BB_DC8DG9:DC4DG5_DD B 8 ? D 5 ? B 9 ? D 4 ? 1 A DG 9 1_555 C DC 4 1_555 A DG 10 1_555 C DC 3 1_555 0.406 -0.737 3.593 0.997 5.375 36.261 -1.970 -0.498 3.462 8.576 -1.590 36.657 9 BB_DG9DG10:DC3DC4_DD B 9 ? D 4 ? B 10 ? D 3 ? 1 A DG 10 1_555 C DC 3 1_555 A DT 11 1_555 C DA 2 1_555 -0.575 -0.908 3.299 -2.183 -1.953 35.070 -1.206 0.619 3.371 -3.234 3.616 35.188 10 BB_DG10DT11:DA2DC3_DD B 10 ? D 3 ? B 11 ? D 2 ? 1 A DT 11 1_555 C DA 2 1_555 A DT 12 1_555 C DA 1 1_555 -0.444 -0.629 3.215 0.107 -3.394 32.388 -0.535 0.810 3.261 -6.064 -0.191 32.561 11 BB_DT11DT12:DA1DA2_DD B 11 ? D 2 ? B 12 ? D 1 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list 8PM5 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8PM5 _pdbx_initial_refinement_model.details 'chain A' # _atom_sites.entry_id 8PMN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.025868 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021223 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013831 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_