HEADER VIRAL PROTEIN 29-JUN-23 8PN6 TITLE CRYSTAL STRUCTURE OF CO-EXPRESSED NS2B-NS3 PROTEASE FROM ZIKA VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE SUBUNIT NS2B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FLAVIVIRIN PROTEASE NS2B REGULATORY SUBUNIT,NON-STRUCTURAL COMPND 5 PROTEIN 2B; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GENOME POLYPROTEIN; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_TAXID: 64320; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 8 ORGANISM_TAXID: 64320; SOURCE 9 GENE: GP1, A2G93_63394GPGP1; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ZIKA NS2B-NS3, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.NI,M.FAIRHEAD,B.H.BALCOMB,J.C.ASCHENBRENNER,L.M.FERREIRA,A.S.GODOY, AUTHOR 2 R.M.LITHGO,E.M.MACLEAN,P.G.MARPLES,W.THOMPSON,C.W.E.TOMLINSON, AUTHOR 3 T.SZOMMER,C.WILD,N.D.WRIGHT,L.KOEKEMOER,D.FEARON,M.A.WALSH,F.VON AUTHOR 4 DELFT REVDAT 2 14-AUG-24 8PN6 1 REMARK REVDAT 1 16-AUG-23 8PN6 0 JRNL AUTH X.NI,M.FAIRHEAD,B.H.BALCOMB,J.C.ASCHENBRENNER,L.M.FERREIRA, JRNL AUTH 2 A.S.GODOY,R.M.LITHGO,E.M.MACLEAN,P.G.MARPLES,W.THOMPSON, JRNL AUTH 3 C.W.E.TOMLINSON,T.SZOMMER,C.WILD,N.D.WRIGHT,L.KOEKEMOER, JRNL AUTH 4 D.FEARON,M.A.WALSH,F.VON DELFT JRNL TITL CRYSTAL STRUCTURE OF CO-EXPRESSED NS2B-NS3 PROTEASE FROM JRNL TITL 2 ZIKA VIRUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 26187 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1344 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1576 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.69 REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1463 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.97000 REMARK 3 B22 (A**2) : 0.97000 REMARK 3 B33 (A**2) : -1.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.927 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1522 ; 0.009 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1437 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2074 ; 1.370 ; 1.637 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3307 ; 0.480 ; 1.571 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 201 ; 7.622 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 10 ; 5.781 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 243 ;12.342 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 231 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1809 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 343 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 789 ; 2.083 ; 2.222 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 789 ; 2.082 ; 2.221 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 986 ; 2.830 ; 3.986 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 987 ; 2.831 ; 3.988 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 733 ; 3.008 ; 2.552 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 734 ; 3.006 ; 2.554 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1086 ; 4.506 ; 4.534 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1630 ; 6.750 ;24.130 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1616 ; 6.729 ;23.040 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 62 REMARK 3 ORIGIN FOR THE GROUP (A): -26.3559 8.1405 -19.7702 REMARK 3 T TENSOR REMARK 3 T11: 0.1501 T22: 0.1083 REMARK 3 T33: 0.0684 T12: 0.0874 REMARK 3 T13: 0.0105 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 3.0579 L22: 9.5426 REMARK 3 L33: 5.0364 L12: -0.3784 REMARK 3 L13: -0.4291 L23: 5.7965 REMARK 3 S TENSOR REMARK 3 S11: 0.1661 S12: 0.1777 S13: 0.1382 REMARK 3 S21: 0.0480 S22: -0.2743 S23: 0.2515 REMARK 3 S31: -0.1379 S32: -0.1961 S33: 0.1082 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 63 A 87 REMARK 3 ORIGIN FOR THE GROUP (A): -7.4363 -5.6817 -18.5825 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.2124 REMARK 3 T33: 0.1254 T12: 0.1218 REMARK 3 T13: 0.0267 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 1.8813 L22: 1.2552 REMARK 3 L33: 6.8131 L12: 0.6635 REMARK 3 L13: 1.3067 L23: 0.8079 REMARK 3 S TENSOR REMARK 3 S11: 0.0480 S12: 0.2903 S13: -0.1014 REMARK 3 S21: -0.1726 S22: -0.0228 S23: -0.1723 REMARK 3 S31: 0.2230 S32: 0.6047 S33: -0.0252 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 17 B 69 REMARK 3 ORIGIN FOR THE GROUP (A): -24.3759 10.2614 -11.9562 REMARK 3 T TENSOR REMARK 3 T11: 0.1654 T22: 0.0627 REMARK 3 T33: 0.0923 T12: 0.0740 REMARK 3 T13: 0.0404 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 3.5650 L22: 5.0307 REMARK 3 L33: 5.9995 L12: 0.7767 REMARK 3 L13: -0.0018 L23: -2.7740 REMARK 3 S TENSOR REMARK 3 S11: 0.3085 S12: 0.0316 S13: 0.5683 REMARK 3 S21: 0.1304 S22: -0.3059 S23: 0.1924 REMARK 3 S31: -0.6383 S32: -0.1057 S33: -0.0027 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 70 B 171 REMARK 3 ORIGIN FOR THE GROUP (A): -15.8726 -3.0976 -18.2025 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.1243 REMARK 3 T33: 0.0265 T12: 0.1106 REMARK 3 T13: -0.0141 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.5074 L22: 1.9890 REMARK 3 L33: 5.2491 L12: -1.0365 REMARK 3 L13: -0.1251 L23: 1.1303 REMARK 3 S TENSOR REMARK 3 S11: 0.2780 S12: 0.2654 S13: -0.1683 REMARK 3 S21: -0.1797 S22: -0.1838 S23: -0.0839 REMARK 3 S31: 0.2822 S32: 0.5002 S33: -0.0942 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8PN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1292131580. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9212 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28203 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 33.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 22.40 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 22.20 REMARK 200 R MERGE FOR SHELL (I) : 1.04900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% W/V PEG 2000, 0.2M AMMONIUM REMARK 280 SULFATE, 0.1M ACETATE (PH 4.8), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.30000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 162.45000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.15000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 108.30000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.15000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 162.45000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 242 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 278 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 44 REMARK 465 MET A 45 REMARK 465 GLY A 46 REMARK 465 LYS A 47 REMARK 465 SER A 48 REMARK 465 GLU A 88 REMARK 465 GLU A 89 REMARK 465 MET B 10 REMARK 465 LYS B 11 REMARK 465 GLU B 12 REMARK 465 VAL B 13 REMARK 465 LYS B 14 REMARK 465 LYS B 15 REMARK 465 GLU B 172 REMARK 465 GLU B 173 REMARK 465 THR B 174 REMARK 465 PRO B 175 REMARK 465 VAL B 176 REMARK 465 GLU B 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 64 CG OD1 OD2 REMARK 470 LYS B 142 CG CD CE NZ REMARK 470 GLU B 171 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 70 -165.19 -106.07 REMARK 500 LEU B 30 -167.19 -106.97 REMARK 500 CYS B 80 -6.96 75.41 REMARK 500 LEU B 92 -41.29 -133.30 REMARK 500 PRO B 131 154.00 -49.15 REMARK 500 REMARK 500 REMARK: NULL DBREF 8PN6 A 46 89 UNP Q32ZE1 POLG_ZIKV 1414 1457 DBREF1 8PN6 B 11 177 UNP A0A142IX72_ZIKV DBREF2 8PN6 B A0A142IX72 1507 1673 SEQADV 8PN6 SER A 44 UNP Q32ZE1 EXPRESSION TAG SEQADV 8PN6 MET A 45 UNP Q32ZE1 EXPRESSION TAG SEQADV 8PN6 MET B 10 UNP A0A142IX7 INITIATING METHIONINE SEQRES 1 A 46 SER MET GLY LYS SER VAL ASP MET TYR ILE GLU ARG ALA SEQRES 2 A 46 GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY SEQRES 3 A 46 ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER GLY SEQRES 4 A 46 ASP PHE SER LEU VAL GLU GLU SEQRES 1 B 168 MET LYS GLU VAL LYS LYS GLY GLU THR THR ASP GLY VAL SEQRES 2 B 168 TYR ARG VAL MET THR ARG ARG LEU LEU GLY SER THR GLN SEQRES 3 B 168 VAL GLY VAL GLY VAL MET GLN GLU GLY VAL PHE HIS THR SEQRES 4 B 168 MET TRP HIS VAL THR LYS GLY ALA ALA LEU ARG SER GLY SEQRES 5 B 168 GLU GLY ARG LEU ASP PRO TYR TRP GLY ASP VAL LYS GLN SEQRES 6 B 168 ASP LEU VAL SER TYR CYS GLY PRO TRP LYS LEU ASP ALA SEQRES 7 B 168 ALA TRP ASP GLY LEU SER GLU VAL GLN LEU LEU ALA VAL SEQRES 8 B 168 PRO PRO GLY GLU ARG ALA LYS ASN ILE GLN THR LEU PRO SEQRES 9 B 168 GLY ILE PHE LYS THR LYS ASP GLY ASP ILE GLY ALA VAL SEQRES 10 B 168 ALA LEU ASP TYR PRO ALA GLY THR SER GLY SER PRO ILE SEQRES 11 B 168 LEU ASP LYS CYS GLY ARG VAL ILE GLY LEU TYR GLY ASN SEQRES 12 B 168 GLY VAL VAL ILE LYS ASN GLY SER TYR VAL SER ALA ILE SEQRES 13 B 168 THR GLN GLY LYS ARG GLU GLU GLU THR PRO VAL GLU FORMUL 3 HOH *106(H2 O) HELIX 1 AA1 TRP B 50 LYS B 54 1 5 HELIX 2 AA2 PRO B 131 SER B 135 5 5 SHEET 1 AA1 6 MET A 51 GLY A 57 0 SHEET 2 AA1 6 GLY B 21 THR B 27 -1 O VAL B 22 N ALA A 56 SHEET 3 AA1 6 THR B 34 GLN B 42 -1 O MET B 41 N GLY B 21 SHEET 4 AA1 6 VAL B 45 MET B 49 -1 O HIS B 47 N VAL B 40 SHEET 5 AA1 6 LEU B 76 TYR B 79 -1 O VAL B 77 N THR B 48 SHEET 6 AA1 6 PRO B 67 ASP B 71 -1 N TYR B 68 O SER B 78 SHEET 1 AA2 5 GLU A 66 VAL A 67 0 SHEET 2 AA2 5 LYS B 107 THR B 111 1 O GLN B 110 N GLU A 66 SHEET 3 AA2 5 VAL B 95 ALA B 99 -1 N VAL B 95 O THR B 111 SHEET 4 AA2 5 PRO B 138 LEU B 140 -1 O PRO B 138 N LEU B 98 SHEET 5 AA2 5 VAL B 146 LEU B 149 -1 O GLY B 148 N ILE B 139 SHEET 1 AA3 6 PHE A 84 LEU A 86 0 SHEET 2 AA3 6 ARG A 73 LEU A 78 -1 N ALA A 77 O SER A 85 SHEET 3 AA3 6 GLY B 114 THR B 118 1 O LYS B 117 N VAL A 76 SHEET 4 AA3 6 GLY B 121 VAL B 126 -1 O ILE B 123 N PHE B 116 SHEET 5 AA3 6 TYR B 161 ALA B 164 -1 O SER B 163 N VAL B 126 SHEET 6 AA3 6 GLY B 153 VAL B 155 -1 N VAL B 154 O VAL B 162 SHEET 1 AA4 2 LEU B 58 SER B 60 0 SHEET 2 AA4 2 GLY B 63 LEU B 65 -1 O LEU B 65 N LEU B 58 CRYST1 43.010 43.010 216.600 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023250 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023250 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004617 0.00000