HEADER HYDROLASE 04-JUL-23 8POB TITLE CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME CO-CRYSTALLIZED WITH 10 MM TITLE 2 TBXO4-SO3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS EWL, CRYSTALLOPHORE VARIANTS, NUCLEATING AGENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.ALSALMAN,E.GIRARD REVDAT 2 17-JUL-24 8POB 1 JRNL REVDAT 1 10-JUL-24 8POB 0 JRNL AUTH A.ROUX,Z.ALSALMAN,T.JIANG,J.C.MULATIER,D.PITRAT,E.DUMONT, JRNL AUTH 2 F.RIOBE,N.GILLET,E.GIRARD,O.MAURY JRNL TITL INFLUENCE OF CHEMICAL MODIFICATIONS OF THE CRYSTALLOPHORE ON JRNL TITL 2 PROTEIN NUCLEATING PROPERTIES AND SUPRAMOLECULAR JRNL TITL 3 INTERACTIONS NETWORK. JRNL REF CHEMISTRY V. 30 00900 2024 JRNL REFN ISSN 0947-6539 JRNL PMID 38738452 JRNL DOI 10.1002/CHEM.202400900 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.ENGILBERGE,F.RIOBE,S.DI PIETRO,L.LASSALLE,N.COQUELLE, REMARK 1 AUTH 2 C.A.ARNAUD,D.PITRAT,J.C.MULATIER,D.MADERN,C.BREYTON,O.MAURY, REMARK 1 AUTH 3 E.GIRARD REMARK 1 TITL CRYSTALLOPHORE: A VERSATILE LANTHANIDE COMPLEX FOR PROTEIN REMARK 1 TITL 2 CRYSTALLOGRAPHY COMBINING NUCLEATING EFFECTS, PHASING REMARK 1 TITL 3 PROPERTIES, AND LUMINESCENCE. REMARK 1 REF CHEM SCI V. 8 5909 2017 REMARK 1 REFN ISSN 2041-6520 REMARK 1 PMID 29619195 REMARK 1 DOI 10.1039/C7SC00758B REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12120 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7000 - 2.7700 1.00 3010 159 0.1661 0.2056 REMARK 3 2 2.7700 - 2.2000 1.00 2863 151 0.1846 0.2562 REMARK 3 3 2.2000 - 1.9200 1.00 2841 149 0.1874 0.2277 REMARK 3 4 1.9200 - 1.7400 1.00 2799 148 0.3056 0.3647 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.286 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.363 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 1068 REMARK 3 ANGLE : 1.291 1446 REMARK 3 CHIRALITY : 0.075 149 REMARK 3 PLANARITY : 0.010 187 REMARK 3 DIHEDRAL : 13.553 391 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5966 -16.0187 -8.8590 REMARK 3 T TENSOR REMARK 3 T11: 0.2514 T22: 0.3887 REMARK 3 T33: 0.3107 T12: -0.0220 REMARK 3 T13: 0.0578 T23: 0.1188 REMARK 3 L TENSOR REMARK 3 L11: 0.2281 L22: 0.2816 REMARK 3 L33: 0.0302 L12: -0.0348 REMARK 3 L13: 0.0523 L23: 0.0615 REMARK 3 S TENSOR REMARK 3 S11: 0.2261 S12: 0.5284 S13: 0.3610 REMARK 3 S21: -0.3020 S22: -0.2958 S23: -0.1510 REMARK 3 S31: -0.3201 S32: 0.2308 S33: -0.0243 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9331 -23.0619 2.2320 REMARK 3 T TENSOR REMARK 3 T11: 0.3161 T22: 0.4740 REMARK 3 T33: 0.4270 T12: 0.0051 REMARK 3 T13: -0.0526 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 0.0291 L22: 0.3688 REMARK 3 L33: 0.1603 L12: -0.0363 REMARK 3 L13: -0.0644 L23: 0.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.1817 S12: -0.2275 S13: -0.0877 REMARK 3 S21: 0.0389 S22: 0.0774 S23: -0.8599 REMARK 3 S31: 0.1039 S32: 0.5173 S33: -0.0043 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3720 -16.4386 3.5213 REMARK 3 T TENSOR REMARK 3 T11: 0.2666 T22: 0.2933 REMARK 3 T33: 0.2892 T12: 0.0407 REMARK 3 T13: 0.0067 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.9114 L22: 0.4479 REMARK 3 L33: 0.1834 L12: -0.1109 REMARK 3 L13: -0.1749 L23: 0.1410 REMARK 3 S TENSOR REMARK 3 S11: -0.0572 S12: 0.0049 S13: 0.1032 REMARK 3 S21: 0.1371 S22: 0.0154 S23: -0.0359 REMARK 3 S31: 0.0113 S32: 0.0652 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6158 -16.4929 5.8996 REMARK 3 T TENSOR REMARK 3 T11: 0.2900 T22: 0.3255 REMARK 3 T33: 0.3653 T12: 0.0126 REMARK 3 T13: -0.0270 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 0.0642 L22: 0.0192 REMARK 3 L33: 0.0698 L12: -0.0072 REMARK 3 L13: -0.0022 L23: -0.0190 REMARK 3 S TENSOR REMARK 3 S11: -0.0779 S12: -0.0634 S13: 0.1524 REMARK 3 S21: 0.3567 S22: 0.0916 S23: -0.1509 REMARK 3 S31: -0.1291 S32: 0.0964 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0558 -28.8795 4.1651 REMARK 3 T TENSOR REMARK 3 T11: 0.2798 T22: 0.3389 REMARK 3 T33: 0.3071 T12: 0.0206 REMARK 3 T13: 0.0300 T23: 0.0398 REMARK 3 L TENSOR REMARK 3 L11: 0.0827 L22: 0.2232 REMARK 3 L33: 0.1586 L12: 0.0963 REMARK 3 L13: 0.0035 L23: -0.1381 REMARK 3 S TENSOR REMARK 3 S11: -0.1824 S12: -0.2628 S13: -0.0300 REMARK 3 S21: 0.3242 S22: 0.1370 S23: 0.2587 REMARK 3 S31: 0.0046 S32: -0.3408 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7321 -28.3880 -10.2699 REMARK 3 T TENSOR REMARK 3 T11: 0.2756 T22: 0.4268 REMARK 3 T33: 0.3311 T12: 0.0335 REMARK 3 T13: 0.0637 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.6374 L22: 0.5187 REMARK 3 L33: 2.2089 L12: 0.3291 REMARK 3 L13: -1.0863 L23: -0.4429 REMARK 3 S TENSOR REMARK 3 S11: -0.0393 S12: 0.2601 S13: 0.0258 REMARK 3 S21: -0.1498 S22: 0.2088 S23: -0.2200 REMARK 3 S31: 0.5696 S32: 0.1984 S33: 0.1931 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8POB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292130175. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.648 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12161 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 38.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 24.10 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 0.2480 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.85500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 28.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 950 MM SODIUM CHLORIDE, 100MM SODIUM REMARK 280 ACETATE PH=4.6. DROPS WERE SET BY MIXING ONE VOLUME OF PROTEIN REMARK 280 SOLUTION AT 20MG/ML WITH ONE VOLUME OF 10MM TBXO4 AND WITH ONE REMARK 280 VOLUME OF THE WELL SOLUTION., PH 4.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.80100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.70200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.70200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.20150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.70200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.70200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.40050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.70200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.70200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.20150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.70200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.70200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.40050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 18.80100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 208 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 335 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 393 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 415 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 ARG A -16 REMARK 465 SER A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 ILE A -12 REMARK 465 LEU A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 CYS A -8 REMARK 465 PHE A -7 REMARK 465 LEU A -6 REMARK 465 PRO A -5 REMARK 465 LEU A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 21 28.28 48.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 210 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 60 O REMARK 620 2 CYS A 64 O 86.0 REMARK 620 3 SER A 72 OG 90.7 167.0 REMARK 620 4 ARG A 73 O 90.0 86.9 105.7 REMARK 620 5 HOH A 349 O 103.1 88.2 80.3 165.7 REMARK 620 6 HOH A 360 O 174.1 98.2 86.1 86.1 81.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 201 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD1 REMARK 620 2 ASP A 101 OD2 55.7 REMARK 620 3 ZW0 A 203 N06 134.1 82.7 REMARK 620 4 ZW0 A 203 O26 67.5 75.5 85.5 REMARK 620 5 ZW0 A 203 N23 116.0 139.6 82.2 66.1 REMARK 620 6 ZW0 A 203 O27 69.8 125.3 148.8 88.7 67.5 REMARK 620 7 ZW0 A 203 N02 119.0 82.4 66.7 146.4 124.3 124.8 REMARK 620 8 ZW0 A 203 N09 158.2 134.5 66.1 130.1 69.9 95.6 55.7 REMARK 620 9 ZW0 A 203 N17 71.8 89.3 131.6 138.2 127.9 68.5 65.0 88.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8OWC RELATED DB: PDB REMARK 900 8OWC CONTAINS THE SAME FAMILY OF CRYSTALLOPHORE MOLECULES DBREF 8POB A -17 129 UNP P00698 LYSC_CHICK 1 147 SEQRES 1 A 147 MET ARG SER LEU LEU ILE LEU VAL LEU CYS PHE LEU PRO SEQRES 2 A 147 LEU ALA ALA LEU GLY LYS VAL PHE GLY ARG CYS GLU LEU SEQRES 3 A 147 ALA ALA ALA MET LYS ARG HIS GLY LEU ASP ASN TYR ARG SEQRES 4 A 147 GLY TYR SER LEU GLY ASN TRP VAL CYS ALA ALA LYS PHE SEQRES 5 A 147 GLU SER ASN PHE ASN THR GLN ALA THR ASN ARG ASN THR SEQRES 6 A 147 ASP GLY SER THR ASP TYR GLY ILE LEU GLN ILE ASN SER SEQRES 7 A 147 ARG TRP TRP CYS ASN ASP GLY ARG THR PRO GLY SER ARG SEQRES 8 A 147 ASN LEU CYS ASN ILE PRO CYS SER ALA LEU LEU SER SER SEQRES 9 A 147 ASP ILE THR ALA SER VAL ASN CYS ALA LYS LYS ILE VAL SEQRES 10 A 147 SER ASP GLY ASN GLY MET ASN ALA TRP VAL ALA TRP ARG SEQRES 11 A 147 ASN ARG CYS LYS GLY THR ASP VAL GLN ALA TRP ILE ARG SEQRES 12 A 147 GLY CYS ARG LEU HET TB A 201 1 HET TB A 202 1 HET ZW0 A 203 64 HET CL A 204 1 HET CL A 205 1 HET CL A 206 1 HET CL A 207 1 HET CL A 208 1 HET CL A 209 1 HET NA A 210 1 HETNAM TB TERBIUM(III) ION HETNAM ZW0 6-[[4-[(6-CARBOXYPYRIDIN-2-YL)METHYL]-7-(3- HETNAM 2 ZW0 SULFOPROPYL)-1,4,7-TRIAZONAN-1-YL]METHYL]PYRIDINE-2- HETNAM 3 ZW0 CARBOXYLIC ACID HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 2 TB 2(TB 3+) FORMUL 4 ZW0 C23 H31 N5 O7 S FORMUL 5 CL 6(CL 1-) FORMUL 11 NA NA 1+ FORMUL 12 HOH *117(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 SER A 100 1 13 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ARG A 125 5 7 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.04 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.10 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.02 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.06 LINK O SER A 60 NA NA A 210 1555 1555 2.35 LINK O CYS A 64 NA NA A 210 1555 1555 2.59 LINK OG SER A 72 NA NA A 210 1555 1555 2.39 LINK O ARG A 73 NA NA A 210 1555 1555 2.51 LINK OD1 ASP A 101 TB TB A 201 1555 1555 2.51 LINK OD2 ASP A 101 TB TB A 201 1555 1555 2.37 LINK TB TB A 201 N06 ZW0 A 203 1555 1555 3.42 LINK TB TB A 201 O26 ZW0 A 203 1555 1555 2.43 LINK TB TB A 201 N23 ZW0 A 203 1555 1555 2.34 LINK TB TB A 201 O27 ZW0 A 203 1555 1555 2.38 LINK TB TB A 201 N02 ZW0 A 203 1555 1555 2.74 LINK TB TB A 201 N09 ZW0 A 203 1555 1555 2.60 LINK TB TB A 201 N17 ZW0 A 203 1555 1555 2.34 LINK TB TB A 202 O HOH A 414 1555 1555 2.79 LINK NA NA A 210 O HOH A 349 1555 1555 2.48 LINK NA NA A 210 O HOH A 360 1555 1555 2.36 CRYST1 77.404 77.404 37.602 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012919 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012919 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026594 0.00000