HEADER SIGNALING PROTEIN 13-JUL-23 8PST TITLE ERK2 COVELENTLY BOUND TO RU60 CYCLOHEXENONE BASED INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAP KINASE 1,MAPK 1,ERT1,EXTRACELLULAR SIGNAL-REGULATED COMPND 5 KINASE 2,ERK-2,MAP KINASE ISOFORM P42,P42-MAPK,MITOGEN-ACTIVATED COMPND 6 PROTEIN KINASE 2,MAP KINASE 2,MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: THE DEPHOSPHORYLATED INACTIVE ERK2 KINASE WITH RU60 COMPND 10 COVALENT INHIBITOR AT THE DOCKING GROOVE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK1, ERK2, PRKM1, PRKM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MAPK KINASE, MAPK, INHIBITOR, COVALENT, ERK2, MICHAEL ACCEPTOR KEYWDS 2 WARHEAD, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.SOK,A.POTI,A.REMENYI,G.GOGL REVDAT 2 16-OCT-24 8PST 1 JRNL REVDAT 1 24-JUL-24 8PST 0 JRNL AUTH A.L.POTI,D.BALINT,A.ALEXA,P.SOK,K.OZSVATH,K.ALBERT, JRNL AUTH 2 G.TURCZEL,S.MAGYARI,O.EMBER,K.PAPP,S.B.KIRALY,T.IMRE, JRNL AUTH 3 K.NEMETH,T.KURTAN,G.GOGL,S.VARGA,T.SOOS,A.REMENYI JRNL TITL TARGETING A KEY PROTEIN-PROTEIN INTERACTION SURFACE ON JRNL TITL 2 MITOGEN-ACTIVATED PROTEIN KINASES BY A PRECISION-GUIDED JRNL TITL 3 WARHEAD SCAFFOLD. JRNL REF NAT COMMUN V. 15 8607 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39366929 JRNL DOI 10.1038/S41467-024-52574-1 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 29648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.690 REMARK 3 FREE R VALUE TEST SET COUNT : 1390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.0900 - 3.2500 0.89 2784 137 0.1655 0.2221 REMARK 3 2 3.2500 - 2.8400 0.91 2807 160 0.1976 0.2331 REMARK 3 3 2.8400 - 2.5800 0.92 2840 131 0.2102 0.2441 REMARK 3 4 2.5800 - 2.3900 0.93 2865 141 0.2112 0.2542 REMARK 3 5 2.3900 - 2.2500 0.93 2853 131 0.2069 0.2313 REMARK 3 6 2.2500 - 2.1400 0.94 2849 151 0.2225 0.3030 REMARK 3 7 2.1400 - 2.0500 0.94 2883 136 0.2262 0.2542 REMARK 3 8 2.0500 - 1.9700 0.93 2831 129 0.2582 0.2964 REMARK 3 9 1.9700 - 1.9000 0.89 2703 132 0.2892 0.2991 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8278 -13.4239 1.3482 REMARK 3 T TENSOR REMARK 3 T11: 0.1941 T22: 0.4161 REMARK 3 T33: 0.3418 T12: 0.0137 REMARK 3 T13: -0.0487 T23: -0.0967 REMARK 3 L TENSOR REMARK 3 L11: 7.1460 L22: 3.5914 REMARK 3 L33: 4.2119 L12: -1.0239 REMARK 3 L13: -2.0817 L23: -0.6998 REMARK 3 S TENSOR REMARK 3 S11: 0.0773 S12: 0.0027 S13: 0.4052 REMARK 3 S21: -0.0351 S22: -0.1439 S23: 0.5178 REMARK 3 S31: -0.5371 S32: -0.4950 S33: 0.0790 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7385 -5.7463 11.0504 REMARK 3 T TENSOR REMARK 3 T11: 0.2638 T22: 0.2796 REMARK 3 T33: 0.2869 T12: -0.0204 REMARK 3 T13: 0.0782 T23: -0.0360 REMARK 3 L TENSOR REMARK 3 L11: 3.3949 L22: 6.8406 REMARK 3 L33: 6.3866 L12: 1.0483 REMARK 3 L13: 0.6863 L23: 3.0680 REMARK 3 S TENSOR REMARK 3 S11: 0.1530 S12: -0.2237 S13: 0.3057 REMARK 3 S21: -0.0078 S22: -0.1302 S23: 0.2514 REMARK 3 S31: -0.8933 S32: -0.1166 S33: -0.0295 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 244 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3690 -15.3973 23.5451 REMARK 3 T TENSOR REMARK 3 T11: 0.2570 T22: 0.2346 REMARK 3 T33: 0.3308 T12: -0.0217 REMARK 3 T13: -0.0325 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 1.1318 L22: 2.1299 REMARK 3 L33: 5.7889 L12: -0.0563 REMARK 3 L13: -1.0346 L23: -0.1445 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: -0.1275 S13: 0.0179 REMARK 3 S21: 0.3872 S22: -0.0188 S23: 0.0342 REMARK 3 S31: -0.0226 S32: 0.3425 S33: -0.0179 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 245 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3546 -1.7269 47.6612 REMARK 3 T TENSOR REMARK 3 T11: 1.0035 T22: 0.6718 REMARK 3 T33: 0.7194 T12: -0.1172 REMARK 3 T13: -0.1343 T23: -0.1701 REMARK 3 L TENSOR REMARK 3 L11: 1.5188 L22: 7.0433 REMARK 3 L33: 2.1254 L12: -1.1776 REMARK 3 L13: -0.7766 L23: 1.6250 REMARK 3 S TENSOR REMARK 3 S11: -0.3308 S12: -0.3495 S13: 0.5588 REMARK 3 S21: 0.4629 S22: 0.7604 S23: -1.4436 REMARK 3 S31: 0.0286 S32: 0.8852 S33: -0.4063 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 326 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7981 -22.8409 38.5826 REMARK 3 T TENSOR REMARK 3 T11: 0.6123 T22: 0.4145 REMARK 3 T33: 0.3277 T12: 0.1142 REMARK 3 T13: -0.0889 T23: 0.0580 REMARK 3 L TENSOR REMARK 3 L11: 2.3971 L22: 4.0275 REMARK 3 L33: 4.2821 L12: -0.1254 REMARK 3 L13: -0.9535 L23: 0.4343 REMARK 3 S TENSOR REMARK 3 S11: -0.0240 S12: -0.3148 S13: -0.2327 REMARK 3 S21: 0.9793 S22: -0.0402 S23: -0.0895 REMARK 3 S31: 0.5017 S32: 0.6773 S33: 0.0699 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 327 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3053 -2.1109 9.2588 REMARK 3 T TENSOR REMARK 3 T11: 0.4477 T22: 0.5148 REMARK 3 T33: 0.6418 T12: -0.2044 REMARK 3 T13: 0.1160 T23: -0.0405 REMARK 3 L TENSOR REMARK 3 L11: 3.4685 L22: 5.7040 REMARK 3 L33: 5.5842 L12: -1.4824 REMARK 3 L13: 0.6909 L23: -0.6342 REMARK 3 S TENSOR REMARK 3 S11: 0.0268 S12: -0.1597 S13: 0.2763 REMARK 3 S21: 0.0300 S22: 0.0657 S23: -1.3779 REMARK 3 S31: -1.0485 S32: 1.1955 S33: -0.1023 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DETAILS OF THE REFINEMENT: IDEAL BOND REMARK 3 LENGTH RESTRAINTS WERE USED FOR THE CYS-RU67 COVALENT BOND REMARK 4 REMARK 4 8PST COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292131836. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29741 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.70600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: RHOMBOID REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG8000. 0.1 M NA-CITRATE PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.82500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.46000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.43000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.46000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.82500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.43000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 176 REMARK 465 ASP A 177 REMARK 465 HIS A 178 REMARK 465 ASP A 179 REMARK 465 HIS A 180 REMARK 465 THR A 181 REMARK 465 GLY A 182 REMARK 465 PHE A 183 REMARK 465 LEU A 184 REMARK 465 THR A 185 REMARK 465 GLU A 186 REMARK 465 TYR A 187 REMARK 465 VAL A 188 REMARK 465 SER A 202 REMARK 465 LYS A 203 REMARK 465 ARG A 359 REMARK 465 SER A 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 175 CG OD1 OD2 REMARK 470 ARG A 191 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 201 CG OD1 ND2 REMARK 470 GLU A 326 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 167 O HOH A 501 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 36 28.65 -147.75 REMARK 500 ARG A 148 -3.29 76.74 REMARK 500 ASP A 149 41.11 -144.74 REMARK 500 ASP A 167 73.91 64.02 REMARK 500 ASP A 167 75.36 61.44 REMARK 500 LEU A 294 53.13 -100.23 REMARK 500 ASP A 318 83.92 -157.45 REMARK 500 REMARK 500 REMARK: NULL DBREF 8PST A 1 360 UNP P28482 MK01_HUMAN 1 360 SEQADV 8PST GLY A -3 UNP P28482 EXPRESSION TAG SEQADV 8PST SER A -2 UNP P28482 EXPRESSION TAG SEQADV 8PST ALA A -1 UNP P28482 EXPRESSION TAG SEQADV 8PST SER A 0 UNP P28482 EXPRESSION TAG SEQRES 1 A 364 GLY SER ALA SER MET ALA ALA ALA ALA ALA ALA GLY ALA SEQRES 2 A 364 GLY PRO GLU MET VAL ARG GLY GLN VAL PHE ASP VAL GLY SEQRES 3 A 364 PRO ARG TYR THR ASN LEU SER TYR ILE GLY GLU GLY ALA SEQRES 4 A 364 TYR GLY MET VAL CYS SER ALA TYR ASP ASN VAL ASN LYS SEQRES 5 A 364 VAL ARG VAL ALA ILE LYS LYS ILE SER PRO PHE GLU HIS SEQRES 6 A 364 GLN THR TYR CYS GLN ARG THR LEU ARG GLU ILE LYS ILE SEQRES 7 A 364 LEU LEU ARG PHE ARG HIS GLU ASN ILE ILE GLY ILE ASN SEQRES 8 A 364 ASP ILE ILE ARG ALA PRO THR ILE GLU GLN MET LYS ASP SEQRES 9 A 364 VAL TYR ILE VAL GLN ASP LEU MET GLU THR ASP LEU TYR SEQRES 10 A 364 LYS LEU LEU LYS THR GLN HIS LEU SER ASN ASP HIS ILE SEQRES 11 A 364 CYS TYR PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR SEQRES 12 A 364 ILE HIS SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SEQRES 13 A 364 SER ASN LEU LEU LEU ASN THR THR CYS ASP LEU LYS ILE SEQRES 14 A 364 CYS ASP PHE GLY LEU ALA ARG VAL ALA ASP PRO ASP HIS SEQRES 15 A 364 ASP HIS THR GLY PHE LEU THR GLU TYR VAL ALA THR ARG SEQRES 16 A 364 TRP TYR ARG ALA PRO GLU ILE MET LEU ASN SER LYS GLY SEQRES 17 A 364 TYR THR LYS SER ILE ASP ILE TRP SER VAL GLY CYS ILE SEQRES 18 A 364 LEU ALA GLU MET LEU SER ASN ARG PRO ILE PHE PRO GLY SEQRES 19 A 364 LYS HIS TYR LEU ASP GLN LEU ASN HIS ILE LEU GLY ILE SEQRES 20 A 364 LEU GLY SER PRO SER GLN GLU ASP LEU ASN CYS ILE ILE SEQRES 21 A 364 ASN LEU LYS ALA ARG ASN TYR LEU LEU SER LEU PRO HIS SEQRES 22 A 364 LYS ASN LYS VAL PRO TRP ASN ARG LEU PHE PRO ASN ALA SEQRES 23 A 364 ASP SER LYS ALA LEU ASP LEU LEU ASP LYS MET LEU THR SEQRES 24 A 364 PHE ASN PRO HIS LYS ARG ILE GLU VAL GLU GLN ALA LEU SEQRES 25 A 364 ALA HIS PRO TYR LEU GLU GLN TYR TYR ASP PRO SER ASP SEQRES 26 A 364 GLU PRO ILE ALA GLU ALA PRO PHE LYS PHE ASP MET GLU SEQRES 27 A 364 LEU ASP ASP LEU PRO LYS GLU LYS LEU LYS GLU LEU ILE SEQRES 28 A 364 PHE GLU GLU THR ALA ARG PHE GLN PRO GLY TYR ARG SER HET AN2 A 401 27 HET DC6 A 402 19 HETNAM AN2 AMP PHOSPHORAMIDATE HETNAM DC6 ~{O}3-~{TERT}-BUTYL ~{O}1-METHYL (1~{R},3~{S})-1- HETNAM 2 DC6 METHYL-4-OXIDANYLIDENE-CYCLOHEXANE-1,3-DICARBOXYLATE FORMUL 2 AN2 C10 H16 N6 O9 P2 FORMUL 3 DC6 C14 H22 O5 FORMUL 4 HOH *137(H2 O) HELIX 1 AA1 HIS A 61 PHE A 78 1 18 HELIX 2 AA2 LEU A 112 GLN A 119 1 8 HELIX 3 AA3 SER A 122 ALA A 143 1 22 HELIX 4 AA4 LYS A 151 SER A 153 5 3 HELIX 5 AA5 GLU A 197 ASN A 201 5 5 HELIX 6 AA6 LYS A 207 ASN A 224 1 18 HELIX 7 AA7 HIS A 232 GLY A 245 1 14 HELIX 8 AA8 SER A 248 CYS A 254 1 7 HELIX 9 AA9 ASN A 257 SER A 266 1 10 HELIX 10 AB1 PRO A 274 PHE A 279 1 6 HELIX 11 AB2 ASP A 283 LEU A 294 1 12 HELIX 12 AB3 ASN A 297 ARG A 301 5 5 HELIX 13 AB4 GLU A 303 ALA A 309 1 7 HELIX 14 AB5 HIS A 310 GLU A 314 5 5 HELIX 15 AB6 ASP A 318 GLU A 322 5 5 HELIX 16 AB7 PRO A 339 ALA A 352 1 14 HELIX 17 AB8 ARG A 353 GLN A 355 5 3 SHEET 1 AA1 2 GLU A 12 VAL A 14 0 SHEET 2 AA1 2 GLN A 17 PHE A 19 -1 O PHE A 19 N GLU A 12 SHEET 1 AA2 5 TYR A 25 GLU A 33 0 SHEET 2 AA2 5 GLY A 37 ASP A 44 -1 O VAL A 39 N GLY A 32 SHEET 3 AA2 5 VAL A 49 ILE A 56 -1 O LYS A 55 N MET A 38 SHEET 4 AA2 5 VAL A 101 ASP A 106 -1 O VAL A 101 N ILE A 56 SHEET 5 AA2 5 ASP A 88 ILE A 90 -1 N ASP A 88 O VAL A 104 SHEET 1 AA3 3 THR A 110 ASP A 111 0 SHEET 2 AA3 3 LEU A 155 LEU A 157 -1 O LEU A 157 N THR A 110 SHEET 3 AA3 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156 SHEET 1 AA4 2 VAL A 145 LEU A 146 0 SHEET 2 AA4 2 ARG A 172 VAL A 173 -1 O ARG A 172 N LEU A 146 LINK SG CYS A 161 C3 DC6 A 402 1555 1555 1.76 CISPEP 1 GLY A 22 PRO A 23 0 1.62 CRYST1 41.650 76.860 124.920 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024010 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013011 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008005 0.00000