HEADER SIGNALING PROTEIN 13-JUL-23 8PSY
TITLE ERK2 COVELENTLY BOUND TO RU68 CYCLOHEXENONE BASED INHIBITOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: MAP KINASE 1,MAPK 1,ERT1,EXTRACELLULAR SIGNAL-REGULATED
COMPND 5 KINASE 2,ERK-2,MAP KINASE ISOFORM P42,P42-MAPK,MITOGEN-ACTIVATED
COMPND 6 PROTEIN KINASE 2,MAP KINASE 2,MAPK 2;
COMPND 7 EC: 2.7.11.24;
COMPND 8 ENGINEERED: YES;
COMPND 9 OTHER_DETAILS: THE DEPHOSPHORYLATED INACTIVE ERK2 KINASE WITH RU68
COMPND 10 COVALENT INHIBITOR AT THE DOCKING GROOVE
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: MAPK1, ERK2, PRKM1, PRKM2;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008
KEYWDS MAPK KINASE, MAPK, INHIBITOR, COVALENT, ERK2, MICHAEL ACCEPTOR
KEYWDS 2 WARHEAD, SIGNALING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR P.SOK,A.POTI,A.REMENYI,G.GOGL
REVDAT 3 16-OCT-24 8PSY 1 JRNL
REVDAT 2 09-OCT-24 8PSY 1 REMARK
REVDAT 1 24-JUL-24 8PSY 0
JRNL AUTH A.L.POTI,D.BALINT,A.ALEXA,P.SOK,K.OZSVATH,K.ALBERT,
JRNL AUTH 2 G.TURCZEL,S.MAGYARI,O.EMBER,K.PAPP,S.B.KIRALY,T.IMRE,
JRNL AUTH 3 K.NEMETH,T.KURTAN,G.GOGL,S.VARGA,T.SOOS,A.REMENYI
JRNL TITL TARGETING A KEY PROTEIN-PROTEIN INTERACTION SURFACE ON
JRNL TITL 2 MITOGEN-ACTIVATED PROTEIN KINASES BY A PRECISION-GUIDED
JRNL TITL 3 WARHEAD SCAFFOLD.
JRNL REF NAT COMMUN V. 15 8607 2024
JRNL REFN ESSN 2041-1723
JRNL PMID 39366929
JRNL DOI 10.1038/S41467-024-52574-1
REMARK 2
REMARK 2 RESOLUTION. 2.55 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.17
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.36
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 14255
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.192
REMARK 3 R VALUE (WORKING SET) : 0.190
REMARK 3 FREE R VALUE : 0.232
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870
REMARK 3 FREE R VALUE TEST SET COUNT : 694
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 4.3600 - 3.4600 1.00 2722 127 0.1621 0.1955
REMARK 3 2 3.4600 - 3.0200 1.00 2688 134 0.2157 0.2726
REMARK 3 3 3.0200 - 2.7500 1.00 2662 148 0.2554 0.2947
REMARK 3 4 2.7500 - 2.5500 1.00 2638 146 0.3039 0.3757
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.100
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : NULL NULL
REMARK 3 ANGLE : NULL NULL
REMARK 3 CHIRALITY : NULL NULL
REMARK 3 PLANARITY : NULL NULL
REMARK 3 DIHEDRAL : NULL NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 6
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 61 )
REMARK 3 ORIGIN FOR THE GROUP (A): -22.4382 -12.1788 2.3444
REMARK 3 T TENSOR
REMARK 3 T11: 0.2698 T22: 0.4491
REMARK 3 T33: 0.4647 T12: 0.0450
REMARK 3 T13: -0.0261 T23: -0.0437
REMARK 3 L TENSOR
REMARK 3 L11: 4.2591 L22: 2.2943
REMARK 3 L33: 3.2905 L12: 1.2788
REMARK 3 L13: -0.4695 L23: 0.6153
REMARK 3 S TENSOR
REMARK 3 S11: 0.2287 S12: 0.2273 S13: 0.2325
REMARK 3 S21: -0.1946 S22: -0.2400 S23: 0.4204
REMARK 3 S31: -0.6091 S32: -0.5665 S33: -0.0298
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 162 )
REMARK 3 ORIGIN FOR THE GROUP (A): -15.0133 -15.9692 16.7858
REMARK 3 T TENSOR
REMARK 3 T11: 0.2732 T22: 0.3246
REMARK 3 T33: 0.3897 T12: 0.0154
REMARK 3 T13: -0.0427 T23: -0.0771
REMARK 3 L TENSOR
REMARK 3 L11: 2.0601 L22: 4.4803
REMARK 3 L33: 6.0438 L12: -0.1981
REMARK 3 L13: -0.6976 L23: -0.4511
REMARK 3 S TENSOR
REMARK 3 S11: -0.0230 S12: -0.1360 S13: -0.0007
REMARK 3 S21: 0.3195 S22: 0.1024 S23: -0.2316
REMARK 3 S31: 0.5583 S32: 0.3396 S33: -0.0920
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 223 )
REMARK 3 ORIGIN FOR THE GROUP (A): -14.3778 -10.0592 29.9394
REMARK 3 T TENSOR
REMARK 3 T11: 0.6442 T22: 0.5023
REMARK 3 T33: 0.4603 T12: -0.0205
REMARK 3 T13: -0.1024 T23: -0.0956
REMARK 3 L TENSOR
REMARK 3 L11: 3.2131 L22: 3.0188
REMARK 3 L33: 5.2514 L12: -1.2464
REMARK 3 L13: -1.5868 L23: 0.4010
REMARK 3 S TENSOR
REMARK 3 S11: 0.0063 S12: -0.5018 S13: 0.5678
REMARK 3 S21: 0.9140 S22: 0.1670 S23: -0.2526
REMARK 3 S31: -0.1849 S32: 0.5880 S33: -0.0778
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 224 THROUGH 266 )
REMARK 3 ORIGIN FOR THE GROUP (A): -18.3022 -4.8483 43.7155
REMARK 3 T TENSOR
REMARK 3 T11: 0.9570 T22: 0.6701
REMARK 3 T33: 0.5905 T12: -0.0964
REMARK 3 T13: 0.0307 T23: -0.1395
REMARK 3 L TENSOR
REMARK 3 L11: 2.3199 L22: 5.5521
REMARK 3 L33: 3.8361 L12: -0.0133
REMARK 3 L13: -0.1694 L23: 1.2430
REMARK 3 S TENSOR
REMARK 3 S11: 0.1532 S12: -0.9488 S13: 0.2668
REMARK 3 S21: 0.8445 S22: -0.1957 S23: -0.0151
REMARK 3 S31: 0.1143 S32: 0.2321 S33: 0.0536
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 326 )
REMARK 3 ORIGIN FOR THE GROUP (A): -13.2760 -22.3468 38.4544
REMARK 3 T TENSOR
REMARK 3 T11: 1.1454 T22: 0.6275
REMARK 3 T33: 0.5017 T12: 0.0869
REMARK 3 T13: -0.1494 T23: 0.0905
REMARK 3 L TENSOR
REMARK 3 L11: 3.0716 L22: 4.2036
REMARK 3 L33: 3.2034 L12: -0.1178
REMARK 3 L13: -0.8982 L23: 1.3904
REMARK 3 S TENSOR
REMARK 3 S11: -0.0297 S12: -0.6164 S13: -0.3131
REMARK 3 S21: 1.3218 S22: -0.1168 S23: -0.0500
REMARK 3 S31: 0.9607 S32: 0.5773 S33: 0.0442
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 327 THROUGH 358 )
REMARK 3 ORIGIN FOR THE GROUP (A): -4.2619 -2.3921 8.8363
REMARK 3 T TENSOR
REMARK 3 T11: 0.5026 T22: 0.7120
REMARK 3 T33: 0.8509 T12: -0.1552
REMARK 3 T13: 0.1764 T23: -0.0789
REMARK 3 L TENSOR
REMARK 3 L11: 4.2977 L22: 5.0719
REMARK 3 L33: 2.5373 L12: -1.7123
REMARK 3 L13: 2.1016 L23: -0.1606
REMARK 3 S TENSOR
REMARK 3 S11: -0.2313 S12: -0.0239 S13: 0.1045
REMARK 3 S21: -0.1915 S22: 0.2774 S23: -0.8371
REMARK 3 S31: -0.9310 S32: 1.3906 S33: -0.0448
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: IDEAL BOND LENGTH RESTRAINTS WERE USED
REMARK 3 FOR THE CYS-RU68 COVALENT BOND
REMARK 4
REMARK 4 8PSY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUL-23.
REMARK 100 THE DEPOSITION ID IS D_1292131814.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 17-NOV-18
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 5.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ESRF
REMARK 200 BEAMLINE : ID23-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14259
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550
REMARK 200 RESOLUTION RANGE LOW (A) : 49.360
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 11.60
REMARK 200 R MERGE (I) : 0.15400
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.8400
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 1.45500
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: RHOMBOID
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 51.70
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG1000, 0.1M NA-CITRATE PH 5.5,
REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.95000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.57000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.16500
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.57000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.95000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.16500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 720 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 16530 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A -3
REMARK 465 SER A -2
REMARK 465 ALA A -1
REMARK 465 SER A 0
REMARK 465 MET A 1
REMARK 465 ALA A 2
REMARK 465 ALA A 3
REMARK 465 ALA A 4
REMARK 465 ALA A 5
REMARK 465 ALA A 6
REMARK 465 ALA A 7
REMARK 465 GLY A 8
REMARK 465 ALA A 9
REMARK 465 GLY A 10
REMARK 465 HIS A 178
REMARK 465 ASP A 179
REMARK 465 HIS A 180
REMARK 465 THR A 181
REMARK 465 GLY A 182
REMARK 465 PHE A 183
REMARK 465 LEU A 184
REMARK 465 THR A 185
REMARK 465 ARG A 359
REMARK 465 SER A 360
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 186 CG CD OE1 OE2
REMARK 470 ARG A 191 CG CD NE CZ NH1 NH2
REMARK 470 LYS A 203 CG CD CE NZ
REMARK 470 ASN A 276 CG OD1 ND2
REMARK 470 ASP A 332 CG OD1 OD2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 TYR A 36 35.16 -143.48
REMARK 500 ARG A 148 -0.29 69.92
REMARK 500 ASP A 149 39.49 -149.20
REMARK 500 ASP A 167 73.94 63.47
REMARK 500 PHE A 279 73.84 -118.37
REMARK 500 LEU A 294 45.84 -98.92
REMARK 500 ASP A 318 86.78 -159.64
REMARK 500 ASP A 332 -8.89 69.83
REMARK 500
REMARK 500 REMARK: NULL
DBREF 8PSY A 1 360 UNP P28482 MK01_HUMAN 1 360
SEQADV 8PSY GLY A -3 UNP P28482 EXPRESSION TAG
SEQADV 8PSY SER A -2 UNP P28482 EXPRESSION TAG
SEQADV 8PSY ALA A -1 UNP P28482 EXPRESSION TAG
SEQADV 8PSY SER A 0 UNP P28482 EXPRESSION TAG
SEQRES 1 A 364 GLY SER ALA SER MET ALA ALA ALA ALA ALA ALA GLY ALA
SEQRES 2 A 364 GLY PRO GLU MET VAL ARG GLY GLN VAL PHE ASP VAL GLY
SEQRES 3 A 364 PRO ARG TYR THR ASN LEU SER TYR ILE GLY GLU GLY ALA
SEQRES 4 A 364 TYR GLY MET VAL CYS SER ALA TYR ASP ASN VAL ASN LYS
SEQRES 5 A 364 VAL ARG VAL ALA ILE LYS LYS ILE SER PRO PHE GLU HIS
SEQRES 6 A 364 GLN THR TYR CYS GLN ARG THR LEU ARG GLU ILE LYS ILE
SEQRES 7 A 364 LEU LEU ARG PHE ARG HIS GLU ASN ILE ILE GLY ILE ASN
SEQRES 8 A 364 ASP ILE ILE ARG ALA PRO THR ILE GLU GLN MET LYS ASP
SEQRES 9 A 364 VAL TYR ILE VAL GLN ASP LEU MET GLU THR ASP LEU TYR
SEQRES 10 A 364 LYS LEU LEU LYS THR GLN HIS LEU SER ASN ASP HIS ILE
SEQRES 11 A 364 CYS TYR PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR
SEQRES 12 A 364 ILE HIS SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO
SEQRES 13 A 364 SER ASN LEU LEU LEU ASN THR THR CYS ASP LEU LYS ILE
SEQRES 14 A 364 CYS ASP PHE GLY LEU ALA ARG VAL ALA ASP PRO ASP HIS
SEQRES 15 A 364 ASP HIS THR GLY PHE LEU THR GLU TYR VAL ALA THR ARG
SEQRES 16 A 364 TRP TYR ARG ALA PRO GLU ILE MET LEU ASN SER LYS GLY
SEQRES 17 A 364 TYR THR LYS SER ILE ASP ILE TRP SER VAL GLY CYS ILE
SEQRES 18 A 364 LEU ALA GLU MET LEU SER ASN ARG PRO ILE PHE PRO GLY
SEQRES 19 A 364 LYS HIS TYR LEU ASP GLN LEU ASN HIS ILE LEU GLY ILE
SEQRES 20 A 364 LEU GLY SER PRO SER GLN GLU ASP LEU ASN CYS ILE ILE
SEQRES 21 A 364 ASN LEU LYS ALA ARG ASN TYR LEU LEU SER LEU PRO HIS
SEQRES 22 A 364 LYS ASN LYS VAL PRO TRP ASN ARG LEU PHE PRO ASN ALA
SEQRES 23 A 364 ASP SER LYS ALA LEU ASP LEU LEU ASP LYS MET LEU THR
SEQRES 24 A 364 PHE ASN PRO HIS LYS ARG ILE GLU VAL GLU GLN ALA LEU
SEQRES 25 A 364 ALA HIS PRO TYR LEU GLU GLN TYR TYR ASP PRO SER ASP
SEQRES 26 A 364 GLU PRO ILE ALA GLU ALA PRO PHE LYS PHE ASP MET GLU
SEQRES 27 A 364 LEU ASP ASP LEU PRO LYS GLU LYS LEU LYS GLU LEU ILE
SEQRES 28 A 364 PHE GLU GLU THR ALA ARG PHE GLN PRO GLY TYR ARG SER
HET AN2 A 401 27
HET EI0 A 402 25
HETNAM AN2 AMP PHOSPHORAMIDATE
HETNAM EI0 ~{O}3-~{TERT}-BUTYL ~{O}1-METHYL (1~{S},3~{R})-4-
HETNAM 2 EI0 OXIDANYLIDENE-1-(PHENYLMETHYL)CYCLOHEXANE-1,3-
HETNAM 3 EI0 DICARBOXYLATE
FORMUL 2 AN2 C10 H16 N6 O9 P2
FORMUL 3 EI0 C20 H26 O5
FORMUL 4 HOH *19(H2 O)
HELIX 1 AA1 HIS A 61 PHE A 78 1 18
HELIX 2 AA2 LEU A 112 GLN A 119 1 8
HELIX 3 AA3 SER A 122 ALA A 143 1 22
HELIX 4 AA4 LYS A 151 SER A 153 5 3
HELIX 5 AA5 ALA A 195 ASN A 201 1 7
HELIX 6 AA6 LYS A 207 ASN A 224 1 18
HELIX 7 AA7 HIS A 232 GLY A 245 1 14
HELIX 8 AA8 SER A 248 CYS A 254 1 7
HELIX 9 AA9 ASN A 257 LEU A 267 1 11
HELIX 10 AB1 PRO A 274 PHE A 279 1 6
HELIX 11 AB2 ASP A 283 LEU A 294 1 12
HELIX 12 AB3 GLU A 303 ALA A 309 1 7
HELIX 13 AB4 HIS A 310 GLU A 314 5 5
HELIX 14 AB5 ASP A 318 GLU A 322 5 5
HELIX 15 AB6 PRO A 339 ALA A 352 1 14
HELIX 16 AB7 ARG A 353 GLN A 355 5 3
SHEET 1 AA1 2 GLU A 12 VAL A 14 0
SHEET 2 AA1 2 GLN A 17 PHE A 19 -1 O PHE A 19 N GLU A 12
SHEET 1 AA2 5 TYR A 25 GLU A 33 0
SHEET 2 AA2 5 GLY A 37 ASP A 44 -1 O VAL A 39 N GLY A 32
SHEET 3 AA2 5 VAL A 49 ILE A 56 -1 O ILE A 53 N CYS A 40
SHEET 4 AA2 5 VAL A 101 ASP A 106 -1 O VAL A 101 N ILE A 56
SHEET 5 AA2 5 ASP A 88 ILE A 90 -1 N ASP A 88 O VAL A 104
SHEET 1 AA3 3 THR A 110 ASP A 111 0
SHEET 2 AA3 3 LEU A 155 LEU A 157 -1 O LEU A 157 N THR A 110
SHEET 3 AA3 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156
SHEET 1 AA4 2 VAL A 145 LEU A 146 0
SHEET 2 AA4 2 ARG A 172 VAL A 173 -1 O ARG A 172 N LEU A 146
LINK SG CYS A 161 C3 EI0 A 402 1555 1555 1.74
CISPEP 1 GLY A 22 PRO A 23 0 -1.62
CRYST1 41.900 78.330 127.140 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.023866 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012767 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007865 0.00000