HEADER SIGNALING PROTEIN 13-JUL-23 8PT3 TITLE ERK2 COVELENTLY BOUND TO RU77 CYCLOHEXENONE BASED INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAP KINASE 1,MAPK 1,ERT1,EXTRACELLULAR SIGNAL-REGULATED COMPND 5 KINASE 2,ERK-2,MAP KINASE ISOFORM P42,P42-MAPK,MITOGEN-ACTIVATED COMPND 6 PROTEIN KINASE 2,MAP KINASE 2,MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: THE DEPHOSPHORYLATED INACTIVE ERK2 KINASE WITH RU77 COMPND 10 COVALENT INHIBITOR AT THE DOCKING GROOVE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK1, ERK2, PRKM1, PRKM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MAPK KINASE, MAPK, INHIBITOR, COVALENT, ERK2, SIGNALING PROTEIN, KEYWDS 2 MICHAEL ACCEPTOR WARHEAD EXPDTA X-RAY DIFFRACTION AUTHOR P.SOK,A.POTI,A.REMENYI REVDAT 2 16-OCT-24 8PT3 1 JRNL REVDAT 1 24-JUL-24 8PT3 0 JRNL AUTH A.L.POTI,D.BALINT,A.ALEXA,P.SOK,K.OZSVATH,K.ALBERT, JRNL AUTH 2 G.TURCZEL,S.MAGYARI,O.EMBER,K.PAPP,S.B.KIRALY,T.IMRE, JRNL AUTH 3 K.NEMETH,T.KURTAN,G.GOGL,S.VARGA,T.SOOS,A.REMENYI JRNL TITL TARGETING A KEY PROTEIN-PROTEIN INTERACTION SURFACE ON JRNL TITL 2 MITOGEN-ACTIVATED PROTEIN KINASES BY A PRECISION-GUIDED JRNL TITL 3 WARHEAD SCAFFOLD. JRNL REF NAT COMMUN V. 15 8607 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39366929 JRNL DOI 10.1038/S41467-024-52574-1 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 38411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.3400 - 3.4400 1.00 2659 146 0.1576 0.1927 REMARK 3 2 3.4400 - 3.0100 1.00 2624 144 0.1924 0.2255 REMARK 3 3 3.0100 - 2.7300 1.00 2637 144 0.2037 0.2184 REMARK 3 4 2.7300 - 2.5400 1.00 2576 142 0.2036 0.2439 REMARK 3 5 2.5400 - 2.3900 1.00 2608 144 0.2075 0.2693 REMARK 3 6 2.3900 - 2.2700 1.00 2580 141 0.1944 0.2358 REMARK 3 7 2.2700 - 2.1700 1.00 2553 140 0.1912 0.2385 REMARK 3 8 2.1700 - 2.0900 1.00 2582 142 0.1925 0.2459 REMARK 3 9 2.0900 - 2.0100 1.00 2549 140 0.1957 0.2545 REMARK 3 10 2.0100 - 1.9500 1.00 2576 142 0.2222 0.2565 REMARK 3 11 1.9500 - 1.8900 1.00 2558 140 0.2419 0.2708 REMARK 3 12 1.8900 - 1.8500 1.00 2567 142 0.2519 0.3087 REMARK 3 13 1.8500 - 1.8000 1.00 2546 139 0.2664 0.2944 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6948 -12.3130 2.6470 REMARK 3 T TENSOR REMARK 3 T11: 0.1939 T22: 0.3775 REMARK 3 T33: 0.2538 T12: 0.0516 REMARK 3 T13: -0.0153 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 3.3761 L22: 4.1055 REMARK 3 L33: 2.2107 L12: 1.8803 REMARK 3 L13: 0.3909 L23: 1.9657 REMARK 3 S TENSOR REMARK 3 S11: 0.0778 S12: 0.0750 S13: 0.1379 REMARK 3 S21: -0.1465 S22: -0.2723 S23: 0.5340 REMARK 3 S31: -0.3125 S32: -0.4613 S33: 0.2099 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0952 -16.8760 16.8290 REMARK 3 T TENSOR REMARK 3 T11: 0.2191 T22: 0.2445 REMARK 3 T33: 0.2848 T12: 0.0136 REMARK 3 T13: -0.0174 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 1.1103 L22: 2.2475 REMARK 3 L33: 3.2485 L12: 0.2768 REMARK 3 L13: -0.4768 L23: -0.7079 REMARK 3 S TENSOR REMARK 3 S11: 0.0722 S12: 0.0019 S13: -0.0755 REMARK 3 S21: 0.1738 S22: -0.0305 S23: -0.0309 REMARK 3 S31: 0.0862 S32: 0.0681 S33: -0.0334 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1408 -9.1759 23.0480 REMARK 3 T TENSOR REMARK 3 T11: 0.3673 T22: 0.3347 REMARK 3 T33: 0.3678 T12: -0.0520 REMARK 3 T13: -0.0542 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 5.5019 L22: 2.4055 REMARK 3 L33: 5.7219 L12: -0.2590 REMARK 3 L13: -0.0108 L23: 1.4193 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: -0.2349 S13: 0.6693 REMARK 3 S21: 0.2466 S22: -0.0858 S23: -0.2652 REMARK 3 S31: -0.6602 S32: 0.4308 S33: 0.1262 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 187 THROUGH 303 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4961 -12.1207 39.9096 REMARK 3 T TENSOR REMARK 3 T11: 0.4567 T22: 0.2831 REMARK 3 T33: 0.2550 T12: -0.0495 REMARK 3 T13: 0.0130 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 2.5161 L22: 2.8137 REMARK 3 L33: 3.5724 L12: -0.5093 REMARK 3 L13: 0.6259 L23: 1.2698 REMARK 3 S TENSOR REMARK 3 S11: -0.0434 S12: -0.2495 S13: 0.2170 REMARK 3 S21: 0.5702 S22: -0.0124 S23: -0.0126 REMARK 3 S31: 0.1273 S32: 0.1462 S33: 0.0494 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 304 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4182 -14.5082 18.2333 REMARK 3 T TENSOR REMARK 3 T11: 0.2532 T22: 0.3442 REMARK 3 T33: 0.3797 T12: 0.0539 REMARK 3 T13: -0.0344 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 1.0707 L22: 4.1454 REMARK 3 L33: 4.8669 L12: 0.4210 REMARK 3 L13: -0.2075 L23: -3.1846 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: -0.0624 S13: -0.0421 REMARK 3 S21: 0.4819 S22: -0.2357 S23: -0.5761 REMARK 3 S31: -0.2267 S32: 0.6582 S33: 0.2618 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 359 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6390 -7.4688 -1.8032 REMARK 3 T TENSOR REMARK 3 T11: 0.5366 T22: 1.1331 REMARK 3 T33: 2.1238 T12: -0.1052 REMARK 3 T13: 0.0322 T23: 0.0494 REMARK 3 L TENSOR REMARK 3 L11: 8.9200 L22: 2.7907 REMARK 3 L33: 5.3451 L12: 0.3342 REMARK 3 L13: 2.5982 L23: -3.4726 REMARK 3 S TENSOR REMARK 3 S11: -1.2737 S12: 2.6846 S13: 0.0555 REMARK 3 S21: -0.1715 S22: 0.3858 S23: 0.2603 REMARK 3 S31: 0.1911 S32: 0.3893 S33: 0.9382 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL BOND LENGTH RESTRAINTS WERE USED REMARK 3 FOR THE HIS125-RU77 COVALENT BOND REMARK 4 REMARK 4 8PT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292131873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38481 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.20 REMARK 200 R MERGE FOR SHELL (I) : 2.15100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: RHOMBOID REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG8000, 0.1 M TRIS PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.96850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.37200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.23550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.37200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.96850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.23550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 ASP A 177 REMARK 465 HIS A 178 REMARK 465 ASP A 179 REMARK 465 HIS A 180 REMARK 465 THR A 181 REMARK 465 GLY A 182 REMARK 465 SER A 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 183 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 191 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 GLU A 326 CD OE1 OE2 REMARK 470 ASP A 332 CG OD1 OD2 REMARK 470 GLU A 349 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 36 32.00 -140.84 REMARK 500 ARG A 148 -2.53 77.79 REMARK 500 ASP A 149 40.08 -140.57 REMARK 500 ASP A 167 82.09 60.24 REMARK 500 ASP A 175 85.75 -161.95 REMARK 500 LYS A 203 57.95 37.62 REMARK 500 TYR A 205 47.71 -105.99 REMARK 500 LEU A 294 53.79 -92.93 REMARK 500 ASP A 318 86.34 -156.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 8PT3 A 1 360 UNP P28482 MK01_HUMAN 1 360 SEQADV 8PT3 GLY A -3 UNP P28482 EXPRESSION TAG SEQADV 8PT3 SER A -2 UNP P28482 EXPRESSION TAG SEQADV 8PT3 ALA A -1 UNP P28482 EXPRESSION TAG SEQADV 8PT3 SER A 0 UNP P28482 EXPRESSION TAG SEQRES 1 A 364 GLY SER ALA SER MET ALA ALA ALA ALA ALA ALA GLY ALA SEQRES 2 A 364 GLY PRO GLU MET VAL ARG GLY GLN VAL PHE ASP VAL GLY SEQRES 3 A 364 PRO ARG TYR THR ASN LEU SER TYR ILE GLY GLU GLY ALA SEQRES 4 A 364 TYR GLY MET VAL CYS SER ALA TYR ASP ASN VAL ASN LYS SEQRES 5 A 364 VAL ARG VAL ALA ILE LYS LYS ILE SER PRO PHE GLU HIS SEQRES 6 A 364 GLN THR TYR CYS GLN ARG THR LEU ARG GLU ILE LYS ILE SEQRES 7 A 364 LEU LEU ARG PHE ARG HIS GLU ASN ILE ILE GLY ILE ASN SEQRES 8 A 364 ASP ILE ILE ARG ALA PRO THR ILE GLU GLN MET LYS ASP SEQRES 9 A 364 VAL TYR ILE VAL GLN ASP LEU MET GLU THR ASP LEU TYR SEQRES 10 A 364 LYS LEU LEU LYS THR GLN HIS LEU SER ASN ASP HIS ILE SEQRES 11 A 364 CYS TYR PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR SEQRES 12 A 364 ILE HIS SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SEQRES 13 A 364 SER ASN LEU LEU LEU ASN THR THR CYS ASP LEU LYS ILE SEQRES 14 A 364 CYS ASP PHE GLY LEU ALA ARG VAL ALA ASP PRO ASP HIS SEQRES 15 A 364 ASP HIS THR GLY PHE LEU THR GLU TYR VAL ALA THR ARG SEQRES 16 A 364 TRP TYR ARG ALA PRO GLU ILE MET LEU ASN SER LYS GLY SEQRES 17 A 364 TYR THR LYS SER ILE ASP ILE TRP SER VAL GLY CYS ILE SEQRES 18 A 364 LEU ALA GLU MET LEU SER ASN ARG PRO ILE PHE PRO GLY SEQRES 19 A 364 LYS HIS TYR LEU ASP GLN LEU ASN HIS ILE LEU GLY ILE SEQRES 20 A 364 LEU GLY SER PRO SER GLN GLU ASP LEU ASN CYS ILE ILE SEQRES 21 A 364 ASN LEU LYS ALA ARG ASN TYR LEU LEU SER LEU PRO HIS SEQRES 22 A 364 LYS ASN LYS VAL PRO TRP ASN ARG LEU PHE PRO ASN ALA SEQRES 23 A 364 ASP SER LYS ALA LEU ASP LEU LEU ASP LYS MET LEU THR SEQRES 24 A 364 PHE ASN PRO HIS LYS ARG ILE GLU VAL GLU GLN ALA LEU SEQRES 25 A 364 ALA HIS PRO TYR LEU GLU GLN TYR TYR ASP PRO SER ASP SEQRES 26 A 364 GLU PRO ILE ALA GLU ALA PRO PHE LYS PHE ASP MET GLU SEQRES 27 A 364 LEU ASP ASP LEU PRO LYS GLU LYS LEU LYS GLU LEU ILE SEQRES 28 A 364 PHE GLU GLU THR ALA ARG PHE GLN PRO GLY TYR ARG SER HET D7O A 401 21 HET GOL A 402 14 HET GOL A 403 14 HET GOL A 404 14 HET ANP A 405 44 HETNAM D7O ~{O}3-~{TERT}-BUTYL ~{O}1-METHYL (1~{S},3~{S},5~{R})-6- HETNAM 2 D7O METHYLIDENE-4-OXIDANYLIDENE-BICYCLO[3.2.1]OCTANE-1,3- HETNAM 3 D7O DICARBOXYLATE HETNAM GOL GLYCEROL HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 D7O C16 H22 O5 FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 ANP C10 H17 N6 O12 P3 FORMUL 7 HOH *152(H2 O) HELIX 1 AA1 HIS A 61 PHE A 78 1 18 HELIX 2 AA2 LEU A 112 GLN A 119 1 8 HELIX 3 AA3 SER A 122 ALA A 143 1 22 HELIX 4 AA4 LYS A 151 SER A 153 5 3 HELIX 5 AA5 ALA A 195 LEU A 200 1 6 HELIX 6 AA6 LYS A 207 ASN A 224 1 18 HELIX 7 AA7 HIS A 232 GLY A 245 1 14 HELIX 8 AA8 SER A 248 CYS A 254 1 7 HELIX 9 AA9 ASN A 257 SER A 266 1 10 HELIX 10 AB1 PRO A 274 PHE A 279 1 6 HELIX 11 AB2 ASP A 283 LEU A 294 1 12 HELIX 12 AB3 GLU A 303 ALA A 309 1 7 HELIX 13 AB4 HIS A 310 GLU A 314 5 5 HELIX 14 AB5 ASP A 318 GLU A 322 5 5 HELIX 15 AB6 PRO A 339 ALA A 352 1 14 HELIX 16 AB7 ARG A 353 GLN A 355 5 3 SHEET 1 AA1 2 MET A 13 VAL A 14 0 SHEET 2 AA1 2 GLN A 17 VAL A 18 -1 O GLN A 17 N VAL A 14 SHEET 1 AA2 5 TYR A 25 GLY A 34 0 SHEET 2 AA2 5 GLY A 37 ASP A 44 -1 O VAL A 39 N GLY A 32 SHEET 3 AA2 5 VAL A 49 ILE A 56 -1 O ILE A 53 N CYS A 40 SHEET 4 AA2 5 VAL A 101 ASP A 106 -1 O VAL A 101 N ILE A 56 SHEET 5 AA2 5 ASP A 88 ILE A 90 -1 N ASP A 88 O VAL A 104 SHEET 1 AA3 3 THR A 110 ASP A 111 0 SHEET 2 AA3 3 LEU A 155 LEU A 157 -1 O LEU A 157 N THR A 110 SHEET 3 AA3 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156 SHEET 1 AA4 2 VAL A 145 LEU A 146 0 SHEET 2 AA4 2 ARG A 172 VAL A 173 -1 O ARG A 172 N LEU A 146 LINK NE2 HIS A 125 C3 D7O A 401 1555 1555 1.55 CISPEP 1 GLY A 22 PRO A 23 0 -2.37 CRYST1 41.937 78.471 122.744 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023845 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012744 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008147 0.00000