data_8PVF # _entry.id 8PVF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8PVF pdb_00008pvf 10.2210/pdb8pvf/pdb WWPDB D_1292131854 ? ? EMDB EMD-17964 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of GAPDH determined by cryoEM at 100 keV' _pdbx_database_related.db_id EMD-17964 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8PVF _pdbx_database_status.recvd_initial_deposition_date 2023-07-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'McMullan, G.' 1 ? 'Naydenova, K.' 2 ? 'Mihaylov, D.' 3 ? 'Peet, M.J.' 4 ? 'Wilson, H.' 5 ? 'Yamashita, K.' 6 ? 'Dickerson, J.L.' 7 ? 'Chen, S.' 8 ? 'Cannone, G.' 9 ? 'Lee, Y.' 10 ? 'Hutchings, K.A.' 11 ? 'Gittins, O.' 12 ? 'Sobhy, M.' 13 ? 'Wells, T.' 14 ? 'El-Gomati, M.M.' 15 ? 'Dalby, J.' 16 ? 'Meffert, M.' 17 ? 'Schulze-Briese, C.' 18 ? 'Henderson, R.' 19 ? 'Russo, C.J.' 20 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 120 _citation.language ? _citation.page_first e2312905120 _citation.page_last e2312905120 _citation.title 'Structure determination by cryoEM at 100 keV.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2312905120 _citation.pdbx_database_id_PubMed 38011573 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McMullan, G.' 1 0000-0001-5449-8850 primary 'Naydenova, K.' 2 0000-0001-5533-5930 primary 'Mihaylov, D.' 3 ? primary 'Yamashita, K.' 4 0000-0002-5442-7582 primary 'Peet, M.J.' 5 0000-0002-0162-0063 primary 'Wilson, H.' 6 0000-0001-9411-2246 primary 'Dickerson, J.L.' 7 0000-0001-5049-4000 primary 'Chen, S.' 8 0000-0002-9472-4397 primary 'Cannone, G.' 9 0000-0002-4381-2522 primary 'Lee, Y.' 10 0000-0002-8040-3648 primary 'Hutchings, K.A.' 11 0000-0001-5760-3193 primary 'Gittins, O.' 12 0000-0002-3818-3952 primary 'Sobhy, M.A.' 13 0000-0002-1964-9497 primary 'Wells, T.' 14 0009-0009-0575-5318 primary 'El-Gomati, M.M.' 15 0000-0002-7782-6965 primary 'Dalby, J.' 16 0009-0007-9046-8609 primary 'Meffert, M.' 17 0000-0001-5637-9791 primary 'Schulze-Briese, C.' 18 0000-0002-8850-3926 primary 'Henderson, R.' 19 0000-0003-1444-0528 primary 'Russo, C.J.' 20 0000-0002-4442-744X # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8PVF _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8PVF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glyceraldehyde-3-phosphate dehydrogenase' 38059.484 1 1.2.1.12 ? ? ? 2 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGRENLYFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKD LCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKF NVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIP ALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIA LNDSFVKLISWYDNESGYSNRLVDLAVYVASRGL ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGRENLYFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKD LCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKF NVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIP ALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIA LNDSFVKLISWYDNESGYSNRLVDLAVYVASRGL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 ARG n 1 12 GLU n 1 13 ASN n 1 14 LEU n 1 15 TYR n 1 16 PHE n 1 17 GLN n 1 18 GLY n 1 19 THR n 1 20 LEU n 1 21 GLY n 1 22 ILE n 1 23 ASN n 1 24 GLY n 1 25 PHE n 1 26 GLY n 1 27 ARG n 1 28 ILE n 1 29 GLY n 1 30 ARG n 1 31 LEU n 1 32 VAL n 1 33 LEU n 1 34 ARG n 1 35 ALA n 1 36 CYS n 1 37 MET n 1 38 GLU n 1 39 ARG n 1 40 ASN n 1 41 ASP n 1 42 ILE n 1 43 THR n 1 44 VAL n 1 45 VAL n 1 46 ALA n 1 47 ILE n 1 48 ASN n 1 49 ASP n 1 50 PRO n 1 51 PHE n 1 52 MET n 1 53 ASP n 1 54 VAL n 1 55 GLU n 1 56 TYR n 1 57 MET n 1 58 ALA n 1 59 TYR n 1 60 LEU n 1 61 LEU n 1 62 LYS n 1 63 TYR n 1 64 ASP n 1 65 SER n 1 66 VAL n 1 67 HIS n 1 68 GLY n 1 69 ASN n 1 70 PHE n 1 71 ASN n 1 72 GLY n 1 73 THR n 1 74 VAL n 1 75 GLU n 1 76 VAL n 1 77 SER n 1 78 GLY n 1 79 LYS n 1 80 ASP n 1 81 LEU n 1 82 CYS n 1 83 ILE n 1 84 ASN n 1 85 GLY n 1 86 LYS n 1 87 VAL n 1 88 VAL n 1 89 LYS n 1 90 VAL n 1 91 PHE n 1 92 GLN n 1 93 ALA n 1 94 LYS n 1 95 ASP n 1 96 PRO n 1 97 ALA n 1 98 GLU n 1 99 ILE n 1 100 PRO n 1 101 TRP n 1 102 GLY n 1 103 ALA n 1 104 SER n 1 105 GLY n 1 106 ALA n 1 107 GLN n 1 108 ILE n 1 109 VAL n 1 110 CYS n 1 111 GLU n 1 112 SER n 1 113 THR n 1 114 GLY n 1 115 VAL n 1 116 PHE n 1 117 THR n 1 118 THR n 1 119 GLU n 1 120 GLU n 1 121 LYS n 1 122 ALA n 1 123 SER n 1 124 LEU n 1 125 HIS n 1 126 LEU n 1 127 LYS n 1 128 GLY n 1 129 GLY n 1 130 ALA n 1 131 LYS n 1 132 LYS n 1 133 VAL n 1 134 ILE n 1 135 ILE n 1 136 SER n 1 137 ALA n 1 138 PRO n 1 139 PRO n 1 140 LYS n 1 141 ASP n 1 142 ASN n 1 143 VAL n 1 144 PRO n 1 145 MET n 1 146 TYR n 1 147 VAL n 1 148 MET n 1 149 GLY n 1 150 VAL n 1 151 ASN n 1 152 ASN n 1 153 THR n 1 154 GLU n 1 155 TYR n 1 156 ASP n 1 157 PRO n 1 158 SER n 1 159 LYS n 1 160 PHE n 1 161 ASN n 1 162 VAL n 1 163 ILE n 1 164 SER n 1 165 ASN n 1 166 ALA n 1 167 SER n 1 168 CYS n 1 169 THR n 1 170 THR n 1 171 ASN n 1 172 CYS n 1 173 LEU n 1 174 ALA n 1 175 PRO n 1 176 LEU n 1 177 ALA n 1 178 LYS n 1 179 ILE n 1 180 ILE n 1 181 ASN n 1 182 ASP n 1 183 LYS n 1 184 PHE n 1 185 GLY n 1 186 ILE n 1 187 VAL n 1 188 GLU n 1 189 GLY n 1 190 LEU n 1 191 MET n 1 192 THR n 1 193 THR n 1 194 VAL n 1 195 HIS n 1 196 SER n 1 197 LEU n 1 198 THR n 1 199 ALA n 1 200 ASN n 1 201 GLN n 1 202 LEU n 1 203 THR n 1 204 VAL n 1 205 ASP n 1 206 GLY n 1 207 PRO n 1 208 SER n 1 209 LYS n 1 210 GLY n 1 211 GLY n 1 212 LYS n 1 213 ASP n 1 214 TRP n 1 215 ARG n 1 216 ALA n 1 217 GLY n 1 218 ARG n 1 219 CYS n 1 220 ALA n 1 221 GLY n 1 222 ASN n 1 223 ASN n 1 224 ILE n 1 225 ILE n 1 226 PRO n 1 227 ALA n 1 228 SER n 1 229 THR n 1 230 GLY n 1 231 ALA n 1 232 ALA n 1 233 LYS n 1 234 ALA n 1 235 VAL n 1 236 GLY n 1 237 LYS n 1 238 VAL n 1 239 ILE n 1 240 PRO n 1 241 ALA n 1 242 LEU n 1 243 ASN n 1 244 GLY n 1 245 LYS n 1 246 LEU n 1 247 THR n 1 248 GLY n 1 249 MET n 1 250 ALA n 1 251 ILE n 1 252 ARG n 1 253 VAL n 1 254 PRO n 1 255 THR n 1 256 PRO n 1 257 ASP n 1 258 VAL n 1 259 SER n 1 260 VAL n 1 261 VAL n 1 262 ASP n 1 263 LEU n 1 264 THR n 1 265 CYS n 1 266 LYS n 1 267 LEU n 1 268 ALA n 1 269 LYS n 1 270 PRO n 1 271 ALA n 1 272 SER n 1 273 ILE n 1 274 GLU n 1 275 GLU n 1 276 ILE n 1 277 TYR n 1 278 GLN n 1 279 ALA n 1 280 VAL n 1 281 LYS n 1 282 GLU n 1 283 ALA n 1 284 SER n 1 285 ASN n 1 286 GLY n 1 287 PRO n 1 288 MET n 1 289 LYS n 1 290 GLY n 1 291 ILE n 1 292 MET n 1 293 GLY n 1 294 TYR n 1 295 THR n 1 296 SER n 1 297 ASP n 1 298 ASP n 1 299 VAL n 1 300 VAL n 1 301 SER n 1 302 THR n 1 303 ASP n 1 304 PHE n 1 305 ILE n 1 306 GLY n 1 307 CYS n 1 308 LYS n 1 309 TYR n 1 310 SER n 1 311 SER n 1 312 ILE n 1 313 PHE n 1 314 ASP n 1 315 LYS n 1 316 ASN n 1 317 ALA n 1 318 CYS n 1 319 ILE n 1 320 ALA n 1 321 LEU n 1 322 ASN n 1 323 ASP n 1 324 SER n 1 325 PHE n 1 326 VAL n 1 327 LYS n 1 328 LEU n 1 329 ILE n 1 330 SER n 1 331 TRP n 1 332 TYR n 1 333 ASP n 1 334 ASN n 1 335 GLU n 1 336 SER n 1 337 GLY n 1 338 TYR n 1 339 SER n 1 340 ASN n 1 341 ARG n 1 342 LEU n 1 343 VAL n 1 344 ASP n 1 345 LEU n 1 346 ALA n 1 347 VAL n 1 348 TYR n 1 349 VAL n 1 350 ALA n 1 351 SER n 1 352 ARG n 1 353 GLY n 1 354 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 354 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'cgd6_3790, 1MB.519, CPATCC_002941' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Cryptosporidium parvum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5807 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7YYQ9_CRYPV _struct_ref.pdbx_db_accession Q7YYQ9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPAE IPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAK IINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDV SVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGY SNRLVDLAVYVASRGL ; _struct_ref.pdbx_align_begin 4 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8PVF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 19 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 354 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7YYQ9 _struct_ref_seq.db_align_beg 4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 339 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 19 _struct_ref_seq.pdbx_auth_seq_align_end 354 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8PVF MET A 1 ? UNP Q7YYQ9 ? ? 'initiating methionine' 1 1 1 8PVF HIS A 2 ? UNP Q7YYQ9 ? ? 'expression tag' 2 2 1 8PVF HIS A 3 ? UNP Q7YYQ9 ? ? 'expression tag' 3 3 1 8PVF HIS A 4 ? UNP Q7YYQ9 ? ? 'expression tag' 4 4 1 8PVF HIS A 5 ? UNP Q7YYQ9 ? ? 'expression tag' 5 5 1 8PVF HIS A 6 ? UNP Q7YYQ9 ? ? 'expression tag' 6 6 1 8PVF HIS A 7 ? UNP Q7YYQ9 ? ? 'expression tag' 7 7 1 8PVF SER A 8 ? UNP Q7YYQ9 ? ? 'expression tag' 8 8 1 8PVF SER A 9 ? UNP Q7YYQ9 ? ? 'expression tag' 9 9 1 8PVF GLY A 10 ? UNP Q7YYQ9 ? ? 'expression tag' 10 10 1 8PVF ARG A 11 ? UNP Q7YYQ9 ? ? 'expression tag' 11 11 1 8PVF GLU A 12 ? UNP Q7YYQ9 ? ? 'expression tag' 12 12 1 8PVF ASN A 13 ? UNP Q7YYQ9 ? ? 'expression tag' 13 13 1 8PVF LEU A 14 ? UNP Q7YYQ9 ? ? 'expression tag' 14 14 1 8PVF TYR A 15 ? UNP Q7YYQ9 ? ? 'expression tag' 15 15 1 8PVF PHE A 16 ? UNP Q7YYQ9 ? ? 'expression tag' 16 16 1 8PVF GLN A 17 ? UNP Q7YYQ9 ? ? 'expression tag' 17 17 1 8PVF GLY A 18 ? UNP Q7YYQ9 ? ? 'expression tag' 18 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8PVF _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.vector[2] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given 1 0 0 0 0 1 0 0 0 0 1 0 ? 2 generate -1 -1.2246468e-16 0 215.424 1.2246468e-16 -1 0 215.424 0 0 1 0 ? 3 generate 1 0 0 0 0 -1 -1.2246468e-16 215.424 0 1.2246468e-16 -1 215.424 ? 4 generate -1 0 1.2246468e-16 215.424 0 1 0 0 -1.2246468e-16 0 -1 215.424 ? # _struct.entry_id 8PVF _struct.title 'Structure of GAPDH determined by cryoEM at 100 keV' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8PVF _struct_keywords.text 'GAPDH, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 26 ? GLU A 38 ? GLY A 26 GLU A 38 1 ? 13 HELX_P HELX_P2 AA2 ASP A 53 ? TYR A 63 ? ASP A 53 TYR A 63 1 ? 11 HELX_P HELX_P3 AA3 ASP A 95 ? ILE A 99 ? ASP A 95 ILE A 99 5 ? 5 HELX_P HELX_P4 AA4 PRO A 100 ? GLY A 105 ? PRO A 100 GLY A 105 1 ? 6 HELX_P HELX_P5 AA5 THR A 118 ? SER A 123 ? THR A 118 SER A 123 1 ? 6 HELX_P HELX_P6 AA6 LEU A 124 ? LYS A 127 ? LEU A 124 LYS A 127 5 ? 4 HELX_P HELX_P7 AA7 ASN A 151 ? TYR A 155 ? ASN A 151 TYR A 155 5 ? 5 HELX_P HELX_P8 AA8 SER A 167 ? PHE A 184 ? SER A 167 PHE A 184 1 ? 18 HELX_P HELX_P9 AA9 GLY A 230 ? ILE A 239 ? GLY A 230 ILE A 239 1 ? 10 HELX_P HELX_P10 AB1 PRO A 240 ? ASN A 243 ? PRO A 240 ASN A 243 5 ? 4 HELX_P HELX_P11 AB2 SER A 272 ? ASN A 285 ? SER A 272 ASN A 285 1 ? 14 HELX_P HELX_P12 AB3 VAL A 300 ? ILE A 305 ? VAL A 300 ILE A 305 5 ? 6 HELX_P HELX_P13 AB4 ASN A 316 ? CYS A 318 ? ASN A 316 CYS A 318 5 ? 3 HELX_P HELX_P14 AB5 GLU A 335 ? ARG A 352 ? GLU A 335 ARG A 352 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 7 ? AA3 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 74 ? VAL A 76 ? VAL A 74 VAL A 76 AA1 2 ASP A 80 ? ILE A 83 ? ASP A 80 ILE A 83 AA1 3 LYS A 86 ? PHE A 91 ? LYS A 86 PHE A 91 AA1 4 THR A 43 ? ASN A 48 ? THR A 43 ASN A 48 AA1 5 THR A 19 ? ASN A 23 ? THR A 19 ASN A 23 AA1 6 ILE A 108 ? GLU A 111 ? ILE A 108 GLU A 111 AA1 7 LYS A 132 ? ILE A 135 ? LYS A 132 ILE A 135 AA1 8 VAL A 162 ? SER A 164 ? VAL A 162 SER A 164 AA2 1 ILE A 225 ? SER A 228 ? ILE A 225 SER A 228 AA2 2 LEU A 246 ? ARG A 252 ? LEU A 246 ARG A 252 AA2 3 ILE A 186 ? HIS A 195 ? ILE A 186 HIS A 195 AA2 4 SER A 259 ? LEU A 267 ? SER A 259 LEU A 267 AA2 5 PHE A 325 ? TYR A 332 ? PHE A 325 TYR A 332 AA2 6 SER A 311 ? ASP A 314 ? SER A 311 ASP A 314 AA2 7 MET A 292 ? THR A 295 ? MET A 292 THR A 295 AA3 1 ILE A 225 ? SER A 228 ? ILE A 225 SER A 228 AA3 2 LEU A 246 ? ARG A 252 ? LEU A 246 ARG A 252 AA3 3 ILE A 186 ? HIS A 195 ? ILE A 186 HIS A 195 AA3 4 SER A 259 ? LEU A 267 ? SER A 259 LEU A 267 AA3 5 PHE A 325 ? TYR A 332 ? PHE A 325 TYR A 332 AA3 6 ILE A 319 ? ASN A 322 ? ILE A 319 ASN A 322 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 75 ? N GLU A 75 O CYS A 82 ? O CYS A 82 AA1 2 3 N LEU A 81 ? N LEU A 81 O VAL A 88 ? O VAL A 88 AA1 3 4 O LYS A 89 ? O LYS A 89 N ILE A 47 ? N ILE A 47 AA1 4 5 O VAL A 45 ? O VAL A 45 N LEU A 20 ? N LEU A 20 AA1 5 6 N GLY A 21 ? N GLY A 21 O CYS A 110 ? O CYS A 110 AA1 6 7 N VAL A 109 ? N VAL A 109 O ILE A 134 ? O ILE A 134 AA1 7 8 N ILE A 135 ? N ILE A 135 O ILE A 163 ? O ILE A 163 AA2 1 2 N ILE A 225 ? N ILE A 225 O ARG A 252 ? O ARG A 252 AA2 2 3 O ILE A 251 ? O ILE A 251 N THR A 193 ? N THR A 193 AA2 3 4 N VAL A 187 ? N VAL A 187 O LYS A 266 ? O LYS A 266 AA2 4 5 N VAL A 261 ? N VAL A 261 O SER A 330 ? O SER A 330 AA2 5 6 O ILE A 329 ? O ILE A 329 N ASP A 314 ? N ASP A 314 AA2 6 7 O SER A 311 ? O SER A 311 N GLY A 293 ? N GLY A 293 AA3 1 2 N ILE A 225 ? N ILE A 225 O ARG A 252 ? O ARG A 252 AA3 2 3 O ILE A 251 ? O ILE A 251 N THR A 193 ? N THR A 193 AA3 3 4 N VAL A 187 ? N VAL A 187 O LYS A 266 ? O LYS A 266 AA3 4 5 N VAL A 261 ? N VAL A 261 O SER A 330 ? O SER A 330 AA3 5 6 O LYS A 327 ? O LYS A 327 N ILE A 319 ? N ILE A 319 # _atom_sites.entry_id 8PVF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 HIS 2 2 ? ? ? A . n A 1 3 HIS 3 3 ? ? ? A . n A 1 4 HIS 4 4 ? ? ? A . n A 1 5 HIS 5 5 ? ? ? A . n A 1 6 HIS 6 6 ? ? ? A . n A 1 7 HIS 7 7 ? ? ? A . n A 1 8 SER 8 8 ? ? ? A . n A 1 9 SER 9 9 ? ? ? A . n A 1 10 GLY 10 10 ? ? ? A . n A 1 11 ARG 11 11 ? ? ? A . n A 1 12 GLU 12 12 ? ? ? A . n A 1 13 ASN 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 TYR 15 15 ? ? ? A . n A 1 16 PHE 16 16 ? ? ? A . n A 1 17 GLN 17 17 ? ? ? A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 MET 52 52 52 MET MET A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 TRP 101 101 101 TRP TRP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 CYS 110 110 110 CYS CYS A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 HIS 125 125 125 HIS HIS A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 PRO 139 139 139 PRO PRO A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 MET 145 145 145 MET MET A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 MET 148 148 148 MET MET A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 TYR 155 155 155 TYR TYR A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 PHE 160 160 160 PHE PHE A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 CYS 168 168 168 CYS CYS A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 CYS 172 172 172 CYS CYS A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 ILE 186 186 186 ILE ILE A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 THR 193 193 193 THR THR A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 HIS 195 195 195 HIS HIS A . n A 1 196 SER 196 196 196 SER SER A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 ALA 199 199 199 ALA ALA A . n A 1 200 ASN 200 200 200 ASN ASN A . n A 1 201 GLN 201 201 201 GLN GLN A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 ASP 205 205 205 ASP ASP A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 SER 208 208 208 SER SER A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 LYS 212 212 212 LYS LYS A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 TRP 214 214 214 TRP TRP A . n A 1 215 ARG 215 215 215 ARG ARG A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 CYS 219 219 219 CYS CYS A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ASN 222 222 222 ASN ASN A . n A 1 223 ASN 223 223 223 ASN ASN A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 ILE 225 225 225 ILE ILE A . n A 1 226 PRO 226 226 226 PRO PRO A . n A 1 227 ALA 227 227 227 ALA ALA A . n A 1 228 SER 228 228 228 SER SER A . n A 1 229 THR 229 229 229 THR THR A . n A 1 230 GLY 230 230 230 GLY GLY A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 ALA 232 232 232 ALA ALA A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 VAL 235 235 235 VAL VAL A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 PRO 240 240 240 PRO PRO A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 GLY 244 244 244 GLY GLY A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 THR 247 247 247 THR THR A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 MET 249 249 249 MET MET A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 ILE 251 251 251 ILE ILE A . n A 1 252 ARG 252 252 252 ARG ARG A . n A 1 253 VAL 253 253 253 VAL VAL A . n A 1 254 PRO 254 254 254 PRO PRO A . n A 1 255 THR 255 255 255 THR THR A . n A 1 256 PRO 256 256 256 PRO PRO A . n A 1 257 ASP 257 257 257 ASP ASP A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 SER 259 259 259 SER SER A . n A 1 260 VAL 260 260 260 VAL VAL A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 ASP 262 262 262 ASP ASP A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 THR 264 264 264 THR THR A . n A 1 265 CYS 265 265 265 CYS CYS A . n A 1 266 LYS 266 266 266 LYS LYS A . n A 1 267 LEU 267 267 267 LEU LEU A . n A 1 268 ALA 268 268 268 ALA ALA A . n A 1 269 LYS 269 269 269 LYS LYS A . n A 1 270 PRO 270 270 270 PRO PRO A . n A 1 271 ALA 271 271 271 ALA ALA A . n A 1 272 SER 272 272 272 SER SER A . n A 1 273 ILE 273 273 273 ILE ILE A . n A 1 274 GLU 274 274 274 GLU GLU A . n A 1 275 GLU 275 275 275 GLU GLU A . n A 1 276 ILE 276 276 276 ILE ILE A . n A 1 277 TYR 277 277 277 TYR TYR A . n A 1 278 GLN 278 278 278 GLN GLN A . n A 1 279 ALA 279 279 279 ALA ALA A . n A 1 280 VAL 280 280 280 VAL VAL A . n A 1 281 LYS 281 281 281 LYS LYS A . n A 1 282 GLU 282 282 282 GLU GLU A . n A 1 283 ALA 283 283 283 ALA ALA A . n A 1 284 SER 284 284 284 SER SER A . n A 1 285 ASN 285 285 285 ASN ASN A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 MET 288 288 288 MET MET A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 ILE 291 291 291 ILE ILE A . n A 1 292 MET 292 292 292 MET MET A . n A 1 293 GLY 293 293 293 GLY GLY A . n A 1 294 TYR 294 294 294 TYR TYR A . n A 1 295 THR 295 295 295 THR THR A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 ASP 297 297 297 ASP ASP A . n A 1 298 ASP 298 298 298 ASP ASP A . n A 1 299 VAL 299 299 299 VAL VAL A . n A 1 300 VAL 300 300 300 VAL VAL A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 THR 302 302 302 THR THR A . n A 1 303 ASP 303 303 303 ASP ASP A . n A 1 304 PHE 304 304 304 PHE PHE A . n A 1 305 ILE 305 305 305 ILE ILE A . n A 1 306 GLY 306 306 306 GLY GLY A . n A 1 307 CYS 307 307 307 CYS CYS A . n A 1 308 LYS 308 308 308 LYS LYS A . n A 1 309 TYR 309 309 309 TYR TYR A . n A 1 310 SER 310 310 310 SER SER A . n A 1 311 SER 311 311 311 SER SER A . n A 1 312 ILE 312 312 312 ILE ILE A . n A 1 313 PHE 313 313 313 PHE PHE A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 LYS 315 315 315 LYS LYS A . n A 1 316 ASN 316 316 316 ASN ASN A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 CYS 318 318 318 CYS CYS A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 ALA 320 320 320 ALA ALA A . n A 1 321 LEU 321 321 321 LEU LEU A . n A 1 322 ASN 322 322 322 ASN ASN A . n A 1 323 ASP 323 323 323 ASP ASP A . n A 1 324 SER 324 324 324 SER SER A . n A 1 325 PHE 325 325 325 PHE PHE A . n A 1 326 VAL 326 326 326 VAL VAL A . n A 1 327 LYS 327 327 327 LYS LYS A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 ILE 329 329 329 ILE ILE A . n A 1 330 SER 330 330 330 SER SER A . n A 1 331 TRP 331 331 331 TRP TRP A . n A 1 332 TYR 332 332 332 TYR TYR A . n A 1 333 ASP 333 333 333 ASP ASP A . n A 1 334 ASN 334 334 334 ASN ASN A . n A 1 335 GLU 335 335 335 GLU GLU A . n A 1 336 SER 336 336 336 SER SER A . n A 1 337 GLY 337 337 337 GLY GLY A . n A 1 338 TYR 338 338 338 TYR TYR A . n A 1 339 SER 339 339 339 SER SER A . n A 1 340 ASN 340 340 340 ASN ASN A . n A 1 341 ARG 341 341 341 ARG ARG A . n A 1 342 LEU 342 342 342 LEU LEU A . n A 1 343 VAL 343 343 343 VAL VAL A . n A 1 344 ASP 344 344 344 ASP ASP A . n A 1 345 LEU 345 345 345 LEU LEU A . n A 1 346 ALA 346 346 346 ALA ALA A . n A 1 347 VAL 347 347 347 VAL VAL A . n A 1 348 TYR 348 348 348 TYR TYR A . n A 1 349 VAL 349 349 349 VAL VAL A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 SER 351 351 351 SER SER A . n A 1 352 ARG 352 352 352 ARG ARG A . n A 1 353 GLY 353 353 353 GLY GLY A . n A 1 354 LEU 354 354 354 LEU LEU A . n # _pdbx_contact_author.id 1 _pdbx_contact_author.email crusso@mrc-lmb.cam.ac.uk _pdbx_contact_author.name_first Christopher _pdbx_contact_author.name_last Russo _pdbx_contact_author.name_mi J. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4442-744X # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id NAD _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id NAD _pdbx_nonpoly_scheme.auth_mon_id NAD _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 2 'point symmetry operation' ? ? -1.000000 -0.000000 0.000000 215.42400 0.000000 -1.000000 0.000000 215.42400 0.000000 0.000000 1.000000 0.00000 3 'point symmetry operation' ? ? 1.000000 0.000000 0.000000 0.00000 0.000000 -1.000000 -0.000000 215.42400 0.000000 0.000000 -1.000000 215.42400 4 'point symmetry operation' ? ? -1.000000 0.000000 0.000000 215.42400 0.000000 1.000000 0.000000 0.00000 -0.000000 0.000000 -1.000000 215.42400 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-11-29 2 'Structure model' 1 1 2023-12-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_entry_details.entry_id 8PVF _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8PVF _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 3cps _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 3cps _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 8PVF _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 19411 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Glyceraldehyde 3-phosphate dehydrogenase' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8PVF _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'JEOL 1400/HR + YPS FEG' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 100 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'UltrAuFoil R0./1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8PVF _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8PVF _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8PVF _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry D2 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 215 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 215 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 215 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.83 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.53 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 25 ? ? -100.70 55.60 2 1 SER A 136 ? ? -96.62 40.44 3 1 ASP A 141 ? ? -125.00 -156.38 4 1 ALA A 166 ? ? 62.69 -161.44 5 1 LYS A 212 ? ? -122.56 -51.98 6 1 VAL A 258 ? ? 95.34 132.68 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 79 ? CG ? A LYS 79 CG 2 1 Y 1 A LYS 79 ? CD ? A LYS 79 CD 3 1 Y 1 A LYS 79 ? CE ? A LYS 79 CE 4 1 Y 1 A LYS 79 ? NZ ? A LYS 79 NZ 5 1 Y 1 A LYS 86 ? CG ? A LYS 86 CG 6 1 Y 1 A LYS 86 ? CD ? A LYS 86 CD 7 1 Y 1 A LYS 86 ? CE ? A LYS 86 CE 8 1 Y 1 A LYS 86 ? NZ ? A LYS 86 NZ 9 1 Y 1 A VAL 87 ? CG1 ? A VAL 87 CG1 10 1 Y 1 A VAL 87 ? CG2 ? A VAL 87 CG2 11 1 Y 1 A ASN 200 ? CG ? A ASN 200 CG 12 1 Y 1 A ASN 200 ? OD1 ? A ASN 200 OD1 13 1 Y 1 A ASN 200 ? ND2 ? A ASN 200 ND2 14 1 Y 1 A LYS 209 ? CG ? A LYS 209 CG 15 1 Y 1 A LYS 209 ? CD ? A LYS 209 CD 16 1 Y 1 A LYS 209 ? CE ? A LYS 209 CE 17 1 Y 1 A LYS 209 ? NZ ? A LYS 209 NZ 18 1 Y 1 A LYS 212 ? CG ? A LYS 212 CG 19 1 Y 1 A LYS 212 ? CD ? A LYS 212 CD 20 1 Y 1 A LYS 212 ? CE ? A LYS 212 CE 21 1 Y 1 A LYS 212 ? NZ ? A LYS 212 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A HIS 2 ? A HIS 2 3 1 Y 1 A HIS 3 ? A HIS 3 4 1 Y 1 A HIS 4 ? A HIS 4 5 1 Y 1 A HIS 5 ? A HIS 5 6 1 Y 1 A HIS 6 ? A HIS 6 7 1 Y 1 A HIS 7 ? A HIS 7 8 1 Y 1 A SER 8 ? A SER 8 9 1 Y 1 A SER 9 ? A SER 9 10 1 Y 1 A GLY 10 ? A GLY 10 11 1 Y 1 A ARG 11 ? A ARG 11 12 1 Y 1 A GLU 12 ? A GLU 12 13 1 Y 1 A ASN 13 ? A ASN 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A TYR 15 ? A TYR 15 16 1 Y 1 A PHE 16 ? A PHE 16 17 1 Y 1 A GLN 17 ? A GLN 17 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAD PA P N S 247 NAD O1A O N N 248 NAD O2A O N N 249 NAD O5B O N N 250 NAD C5B C N N 251 NAD C4B C N R 252 NAD O4B O N N 253 NAD C3B C N S 254 NAD O3B O N N 255 NAD C2B C N R 256 NAD O2B O N N 257 NAD C1B C N R 258 NAD N9A N Y N 259 NAD C8A C Y N 260 NAD N7A N Y N 261 NAD C5A C Y N 262 NAD C6A C Y N 263 NAD N6A N N N 264 NAD N1A N Y N 265 NAD C2A C Y N 266 NAD N3A N Y N 267 NAD C4A C Y N 268 NAD O3 O N N 269 NAD PN P N N 270 NAD O1N O N N 271 NAD O2N O N N 272 NAD O5D O N N 273 NAD C5D C N N 274 NAD C4D C N R 275 NAD O4D O N N 276 NAD C3D C N S 277 NAD O3D O N N 278 NAD C2D C N R 279 NAD O2D O N N 280 NAD C1D C N R 281 NAD N1N N Y N 282 NAD C2N C Y N 283 NAD C3N C Y N 284 NAD C7N C N N 285 NAD O7N O N N 286 NAD N7N N N N 287 NAD C4N C Y N 288 NAD C5N C Y N 289 NAD C6N C Y N 290 NAD HOA2 H N N 291 NAD H51A H N N 292 NAD H52A H N N 293 NAD H4B H N N 294 NAD H3B H N N 295 NAD HO3A H N N 296 NAD H2B H N N 297 NAD HO2A H N N 298 NAD H1B H N N 299 NAD H8A H N N 300 NAD H61A H N N 301 NAD H62A H N N 302 NAD H2A H N N 303 NAD H51N H N N 304 NAD H52N H N N 305 NAD H4D H N N 306 NAD H3D H N N 307 NAD HO3N H N N 308 NAD H2D H N N 309 NAD HO2N H N N 310 NAD H1D H N N 311 NAD H2N H N N 312 NAD H71N H N N 313 NAD H72N H N N 314 NAD H4N H N N 315 NAD H5N H N N 316 NAD H6N H N N 317 PHE N N N N 318 PHE CA C N S 319 PHE C C N N 320 PHE O O N N 321 PHE CB C N N 322 PHE CG C Y N 323 PHE CD1 C Y N 324 PHE CD2 C Y N 325 PHE CE1 C Y N 326 PHE CE2 C Y N 327 PHE CZ C Y N 328 PHE OXT O N N 329 PHE H H N N 330 PHE H2 H N N 331 PHE HA H N N 332 PHE HB2 H N N 333 PHE HB3 H N N 334 PHE HD1 H N N 335 PHE HD2 H N N 336 PHE HE1 H N N 337 PHE HE2 H N N 338 PHE HZ H N N 339 PHE HXT H N N 340 PRO N N N N 341 PRO CA C N S 342 PRO C C N N 343 PRO O O N N 344 PRO CB C N N 345 PRO CG C N N 346 PRO CD C N N 347 PRO OXT O N N 348 PRO H H N N 349 PRO HA H N N 350 PRO HB2 H N N 351 PRO HB3 H N N 352 PRO HG2 H N N 353 PRO HG3 H N N 354 PRO HD2 H N N 355 PRO HD3 H N N 356 PRO HXT H N N 357 SER N N N N 358 SER CA C N S 359 SER C C N N 360 SER O O N N 361 SER CB C N N 362 SER OG O N N 363 SER OXT O N N 364 SER H H N N 365 SER H2 H N N 366 SER HA H N N 367 SER HB2 H N N 368 SER HB3 H N N 369 SER HG H N N 370 SER HXT H N N 371 THR N N N N 372 THR CA C N S 373 THR C C N N 374 THR O O N N 375 THR CB C N R 376 THR OG1 O N N 377 THR CG2 C N N 378 THR OXT O N N 379 THR H H N N 380 THR H2 H N N 381 THR HA H N N 382 THR HB H N N 383 THR HG1 H N N 384 THR HG21 H N N 385 THR HG22 H N N 386 THR HG23 H N N 387 THR HXT H N N 388 TRP N N N N 389 TRP CA C N S 390 TRP C C N N 391 TRP O O N N 392 TRP CB C N N 393 TRP CG C Y N 394 TRP CD1 C Y N 395 TRP CD2 C Y N 396 TRP NE1 N Y N 397 TRP CE2 C Y N 398 TRP CE3 C Y N 399 TRP CZ2 C Y N 400 TRP CZ3 C Y N 401 TRP CH2 C Y N 402 TRP OXT O N N 403 TRP H H N N 404 TRP H2 H N N 405 TRP HA H N N 406 TRP HB2 H N N 407 TRP HB3 H N N 408 TRP HD1 H N N 409 TRP HE1 H N N 410 TRP HE3 H N N 411 TRP HZ2 H N N 412 TRP HZ3 H N N 413 TRP HH2 H N N 414 TRP HXT H N N 415 TYR N N N N 416 TYR CA C N S 417 TYR C C N N 418 TYR O O N N 419 TYR CB C N N 420 TYR CG C Y N 421 TYR CD1 C Y N 422 TYR CD2 C Y N 423 TYR CE1 C Y N 424 TYR CE2 C Y N 425 TYR CZ C Y N 426 TYR OH O N N 427 TYR OXT O N N 428 TYR H H N N 429 TYR H2 H N N 430 TYR HA H N N 431 TYR HB2 H N N 432 TYR HB3 H N N 433 TYR HD1 H N N 434 TYR HD2 H N N 435 TYR HE1 H N N 436 TYR HE2 H N N 437 TYR HH H N N 438 TYR HXT H N N 439 VAL N N N N 440 VAL CA C N S 441 VAL C C N N 442 VAL O O N N 443 VAL CB C N N 444 VAL CG1 C N N 445 VAL CG2 C N N 446 VAL OXT O N N 447 VAL H H N N 448 VAL H2 H N N 449 VAL HA H N N 450 VAL HB H N N 451 VAL HG11 H N N 452 VAL HG12 H N N 453 VAL HG13 H N N 454 VAL HG21 H N N 455 VAL HG22 H N N 456 VAL HG23 H N N 457 VAL HXT H N N 458 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAD PA O1A doub N N 235 NAD PA O2A sing N N 236 NAD PA O5B sing N N 237 NAD PA O3 sing N N 238 NAD O2A HOA2 sing N N 239 NAD O5B C5B sing N N 240 NAD C5B C4B sing N N 241 NAD C5B H51A sing N N 242 NAD C5B H52A sing N N 243 NAD C4B O4B sing N N 244 NAD C4B C3B sing N N 245 NAD C4B H4B sing N N 246 NAD O4B C1B sing N N 247 NAD C3B O3B sing N N 248 NAD C3B C2B sing N N 249 NAD C3B H3B sing N N 250 NAD O3B HO3A sing N N 251 NAD C2B O2B sing N N 252 NAD C2B C1B sing N N 253 NAD C2B H2B sing N N 254 NAD O2B HO2A sing N N 255 NAD C1B N9A sing N N 256 NAD C1B H1B sing N N 257 NAD N9A C8A sing Y N 258 NAD N9A C4A sing Y N 259 NAD C8A N7A doub Y N 260 NAD C8A H8A sing N N 261 NAD N7A C5A sing Y N 262 NAD C5A C6A sing Y N 263 NAD C5A C4A doub Y N 264 NAD C6A N6A sing N N 265 NAD C6A N1A doub Y N 266 NAD N6A H61A sing N N 267 NAD N6A H62A sing N N 268 NAD N1A C2A sing Y N 269 NAD C2A N3A doub Y N 270 NAD C2A H2A sing N N 271 NAD N3A C4A sing Y N 272 NAD O3 PN sing N N 273 NAD PN O1N doub N N 274 NAD PN O2N sing N N 275 NAD PN O5D sing N N 276 NAD O5D C5D sing N N 277 NAD C5D C4D sing N N 278 NAD C5D H51N sing N N 279 NAD C5D H52N sing N N 280 NAD C4D O4D sing N N 281 NAD C4D C3D sing N N 282 NAD C4D H4D sing N N 283 NAD O4D C1D sing N N 284 NAD C3D O3D sing N N 285 NAD C3D C2D sing N N 286 NAD C3D H3D sing N N 287 NAD O3D HO3N sing N N 288 NAD C2D O2D sing N N 289 NAD C2D C1D sing N N 290 NAD C2D H2D sing N N 291 NAD O2D HO2N sing N N 292 NAD C1D N1N sing N N 293 NAD C1D H1D sing N N 294 NAD N1N C2N sing Y N 295 NAD N1N C6N doub Y N 296 NAD C2N C3N doub Y N 297 NAD C2N H2N sing N N 298 NAD C3N C7N sing N N 299 NAD C3N C4N sing Y N 300 NAD C7N O7N doub N N 301 NAD C7N N7N sing N N 302 NAD N7N H71N sing N N 303 NAD N7N H72N sing N N 304 NAD C4N C5N doub Y N 305 NAD C4N H4N sing N N 306 NAD C5N C6N sing Y N 307 NAD C5N H5N sing N N 308 NAD C6N H6N sing N N 309 PHE N CA sing N N 310 PHE N H sing N N 311 PHE N H2 sing N N 312 PHE CA C sing N N 313 PHE CA CB sing N N 314 PHE CA HA sing N N 315 PHE C O doub N N 316 PHE C OXT sing N N 317 PHE CB CG sing N N 318 PHE CB HB2 sing N N 319 PHE CB HB3 sing N N 320 PHE CG CD1 doub Y N 321 PHE CG CD2 sing Y N 322 PHE CD1 CE1 sing Y N 323 PHE CD1 HD1 sing N N 324 PHE CD2 CE2 doub Y N 325 PHE CD2 HD2 sing N N 326 PHE CE1 CZ doub Y N 327 PHE CE1 HE1 sing N N 328 PHE CE2 CZ sing Y N 329 PHE CE2 HE2 sing N N 330 PHE CZ HZ sing N N 331 PHE OXT HXT sing N N 332 PRO N CA sing N N 333 PRO N CD sing N N 334 PRO N H sing N N 335 PRO CA C sing N N 336 PRO CA CB sing N N 337 PRO CA HA sing N N 338 PRO C O doub N N 339 PRO C OXT sing N N 340 PRO CB CG sing N N 341 PRO CB HB2 sing N N 342 PRO CB HB3 sing N N 343 PRO CG CD sing N N 344 PRO CG HG2 sing N N 345 PRO CG HG3 sing N N 346 PRO CD HD2 sing N N 347 PRO CD HD3 sing N N 348 PRO OXT HXT sing N N 349 SER N CA sing N N 350 SER N H sing N N 351 SER N H2 sing N N 352 SER CA C sing N N 353 SER CA CB sing N N 354 SER CA HA sing N N 355 SER C O doub N N 356 SER C OXT sing N N 357 SER CB OG sing N N 358 SER CB HB2 sing N N 359 SER CB HB3 sing N N 360 SER OG HG sing N N 361 SER OXT HXT sing N N 362 THR N CA sing N N 363 THR N H sing N N 364 THR N H2 sing N N 365 THR CA C sing N N 366 THR CA CB sing N N 367 THR CA HA sing N N 368 THR C O doub N N 369 THR C OXT sing N N 370 THR CB OG1 sing N N 371 THR CB CG2 sing N N 372 THR CB HB sing N N 373 THR OG1 HG1 sing N N 374 THR CG2 HG21 sing N N 375 THR CG2 HG22 sing N N 376 THR CG2 HG23 sing N N 377 THR OXT HXT sing N N 378 TRP N CA sing N N 379 TRP N H sing N N 380 TRP N H2 sing N N 381 TRP CA C sing N N 382 TRP CA CB sing N N 383 TRP CA HA sing N N 384 TRP C O doub N N 385 TRP C OXT sing N N 386 TRP CB CG sing N N 387 TRP CB HB2 sing N N 388 TRP CB HB3 sing N N 389 TRP CG CD1 doub Y N 390 TRP CG CD2 sing Y N 391 TRP CD1 NE1 sing Y N 392 TRP CD1 HD1 sing N N 393 TRP CD2 CE2 doub Y N 394 TRP CD2 CE3 sing Y N 395 TRP NE1 CE2 sing Y N 396 TRP NE1 HE1 sing N N 397 TRP CE2 CZ2 sing Y N 398 TRP CE3 CZ3 doub Y N 399 TRP CE3 HE3 sing N N 400 TRP CZ2 CH2 doub Y N 401 TRP CZ2 HZ2 sing N N 402 TRP CZ3 CH2 sing Y N 403 TRP CZ3 HZ3 sing N N 404 TRP CH2 HH2 sing N N 405 TRP OXT HXT sing N N 406 TYR N CA sing N N 407 TYR N H sing N N 408 TYR N H2 sing N N 409 TYR CA C sing N N 410 TYR CA CB sing N N 411 TYR CA HA sing N N 412 TYR C O doub N N 413 TYR C OXT sing N N 414 TYR CB CG sing N N 415 TYR CB HB2 sing N N 416 TYR CB HB3 sing N N 417 TYR CG CD1 doub Y N 418 TYR CG CD2 sing Y N 419 TYR CD1 CE1 sing Y N 420 TYR CD1 HD1 sing N N 421 TYR CD2 CE2 doub Y N 422 TYR CD2 HD2 sing N N 423 TYR CE1 CZ doub Y N 424 TYR CE1 HE1 sing N N 425 TYR CE2 CZ sing Y N 426 TYR CE2 HE2 sing N N 427 TYR CZ OH sing N N 428 TYR OH HH sing N N 429 TYR OXT HXT sing N N 430 VAL N CA sing N N 431 VAL N H sing N N 432 VAL N H2 sing N N 433 VAL CA C sing N N 434 VAL CA CB sing N N 435 VAL CA HA sing N N 436 VAL C O doub N N 437 VAL C OXT sing N N 438 VAL CB CG1 sing N N 439 VAL CB CG2 sing N N 440 VAL CB HB sing N N 441 VAL CG1 HG11 sing N N 442 VAL CG1 HG12 sing N N 443 VAL CG1 HG13 sing N N 444 VAL CG2 HG21 sing N N 445 VAL CG2 HG22 sing N N 446 VAL CG2 HG23 sing N N 447 VAL OXT HXT sing N N 448 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 5807 _em_entity_assembly_naturalsource.organism 'Cryptosporidium parvum' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'DECTRIS SINGLA (1k x 1k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? RECONSTRUCTION ? 12 1 ? ? ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? Servalcat 0.4.27 # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' 'MC UP 120117' 1 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' 'MC U105184322' 2 'Wellcome Trust' 'United Kingdom' 220526/B/20/Z 3 'Engineering and Physical Sciences Research Council' 'United Kingdom' R122522 4 'Innovate UK' 'United Kingdom' 103806 5 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/T003677/1 6 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _pdbx_entity_nonpoly.comp_id NAD # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3cps # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' #