HEADER LIGASE 20-JUL-23 8PWC
TITLE CRYSTAL STRUCTURE OF MDM2 WITH BRIGIMADLIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE MDM2;
COMPND 3 CHAIN: A, B, C;
COMPND 4 SYNONYM: DOUBLE MINUTE 2 PROTEIN,HDM2,ONCOPROTEIN MDM2,RING-TYPE E3
COMPND 5 UBIQUITIN TRANSFERASE MDM2,P53-BINDING PROTEIN MDM2;
COMPND 6 EC: 2.3.2.27;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: MDM2;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS INHIBITOR, COMPLEX, LIGASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.BADER,B.WOLKERSTORFER
REVDAT 2 11-DEC-24 8PWC 1 JRNL
REVDAT 1 02-OCT-24 8PWC 0
JRNL AUTH A.GOLLNER,D.RUDOLPH,U.WEYER-CZERNILOFSKY,R.BAUMGARTINGER,
JRNL AUTH 2 P.JUNG,H.WEINSTABL,J.RAMHARTER,R.GREMPLER,J.QUANT,
JRNL AUTH 3 J.RINNENTHAL,A.PEREZ PITARCH,B.GOLUBOVIC,D.GERLACH,G.BADER,
JRNL AUTH 4 K.WETZEL,S.OTTO,C.MANDL,G.BOEHMELT,D.B.MCCONNELL,N.KRAUT,
JRNL AUTH 5 P.SINI
JRNL TITL DISCOVERY AND CHARACTERIZATION OF BRIGIMADLIN, A NOVEL AND
JRNL TITL 2 HIGHLY POTENT MDM2-P53 ANTAGONIST SUITABLE FOR INTERMITTENT
JRNL TITL 3 DOSE SCHEDULES.
JRNL REF MOL.CANCER THER. V. 23 1689 2024
JRNL REFN ESSN 1538-8514
JRNL PMID 39259562
JRNL DOI 10.1158/1535-7163.MCT-23-0783
REMARK 2
REMARK 2 RESOLUTION. 1.46 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.8 (8-JUN-2022)
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.60
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 80.7
REMARK 3 NUMBER OF REFLECTIONS : 45565
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.201
REMARK 3 R VALUE (WORKING SET) : 0.199
REMARK 3 FREE R VALUE : 0.226
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900
REMARK 3 FREE R VALUE TEST SET COUNT : 2233
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.52
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 14.27
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL
REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 869
REMARK 3 BIN R VALUE (WORKING SET) : 0.2772
REMARK 3 BIN FREE R VALUE : 0.2749
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.71
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2260
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 123
REMARK 3 SOLVENT ATOMS : 215
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.12
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.41610
REMARK 3 B22 (A**2) : 0.41610
REMARK 3 B33 (A**2) : -0.83210
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.200
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.085
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.084
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.100
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.085
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 4910 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 8926 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1452 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL
REMARK 3 GENERAL PLANES : 777 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 4901 ; 10.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 306 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : 2 ; 1.000 ; HARMONIC
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 4772 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.04
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.81
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.89
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 30.2164 -29.2232 6.6641
REMARK 3 T TENSOR
REMARK 3 T11: -0.0270 T22: 0.0145
REMARK 3 T33: -0.0202 T12: -0.0242
REMARK 3 T13: 0.0181 T23: -0.0149
REMARK 3 L TENSOR
REMARK 3 L11: 0.7388 L22: 0.8942
REMARK 3 L33: 1.7206 L12: 0.2194
REMARK 3 L13: 0.2448 L23: 0.4958
REMARK 3 S TENSOR
REMARK 3 S11: -0.0158 S12: -0.0208 S13: -0.0487
REMARK 3 S21: 0.0587 S22: -0.0845 S23: 0.0556
REMARK 3 S31: 0.0930 S32: -0.1709 S33: 0.1004
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 11.5393 -42.5188 21.8253
REMARK 3 T TENSOR
REMARK 3 T11: -0.0211 T22: -0.0041
REMARK 3 T33: -0.0181 T12: -0.0351
REMARK 3 T13: -0.0151 T23: 0.0264
REMARK 3 L TENSOR
REMARK 3 L11: 1.3225 L22: 0.6619
REMARK 3 L33: 2.4226 L12: 0.3091
REMARK 3 L13: 0.7479 L23: -0.3403
REMARK 3 S TENSOR
REMARK 3 S11: -0.0207 S12: 0.0844 S13: -0.0145
REMARK 3 S21: 0.0682 S22: -0.1289 S23: -0.1226
REMARK 3 S31: -0.1244 S32: 0.1600 S33: 0.1496
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: { C|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 38.3593 -59.7226 30.4624
REMARK 3 T TENSOR
REMARK 3 T11: -0.2172 T22: -0.2123
REMARK 3 T33: 0.3642 T12: 0.0092
REMARK 3 T13: 0.1873 T23: 0.2273
REMARK 3 L TENSOR
REMARK 3 L11: 1.7421 L22: 5.2826
REMARK 3 L33: 3.1772 L12: -0.0859
REMARK 3 L13: 0.3810 L23: 0.4826
REMARK 3 S TENSOR
REMARK 3 S11: 0.2780 S12: 0.4277 S13: 0.5601
REMARK 3 S21: -0.0890 S22: 0.2221 S23: 0.1344
REMARK 3 S31: -0.3712 S32: 0.0636 S33: -0.5001
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: { X|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 27.5456 -45.3199 22.8010
REMARK 3 T TENSOR
REMARK 3 T11: 0.0407 T22: -0.0224
REMARK 3 T33: 0.0537 T12: -0.0475
REMARK 3 T13: -0.0001 T23: 0.0031
REMARK 3 L TENSOR
REMARK 3 L11: 0.4344 L22: 0.0489
REMARK 3 L33: 0.0000 L12: 0.1678
REMARK 3 L13: -0.2990 L23: -0.3073
REMARK 3 S TENSOR
REMARK 3 S11: -0.0563 S12: 0.0334 S13: -0.2043
REMARK 3 S21: -0.0276 S22: -0.0358 S23: -0.1140
REMARK 3 S31: -0.0007 S32: -0.0852 S33: 0.0921
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS WERE FULLY REFINED
REMARK 3 WITH FULL OCCUPANCY AT NUCLEAR POSITION.
REMARK 4
REMARK 4 8PWC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUL-23.
REMARK 100 THE DEPOSITION ID IS D_1292132078.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 02-NOV-22
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SLS
REMARK 200 BEAMLINE : X06SA
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.000
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC, XDS (VERSION FEB 5,
REMARK 200 AUTOPROC
REMARK 200 DATA SCALING SOFTWARE : AUTOPROC (VERSION 1.1.7),
REMARK 200 AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45565
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.461
REMARK 200 RESOLUTION RANGE LOW (A) : 41.600
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 80.8
REMARK 200 DATA REDUNDANCY : 9.400
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.9000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.46
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: BUSTER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 44.72
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1M SODIUM SULPHATE, 10
REMARK 280 MM MANGANES CHLORIDE, PH 7.0, VAPOR DIFFUSION, SITTING DROP,
REMARK 280 TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.03733
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.01867
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2, 3
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 3
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 VAL A 110
REMARK 465 ASN A 111
REMARK 465 GLN A 112
REMARK 465 GLN A 113
REMARK 465 GLU A 114
REMARK 465 SER A 115
REMARK 465 SER A 116
REMARK 465 ASP A 117
REMARK 465 SER A 118
REMARK 465 GLY A 119
REMARK 465 THR A 120
REMARK 465 SER A 121
REMARK 465 VAL A 122
REMARK 465 SER A 123
REMARK 465 GLU A 124
REMARK 465 ASN A 125
REMARK 465 ASN B 111
REMARK 465 GLN B 112
REMARK 465 GLN B 113
REMARK 465 GLU B 114
REMARK 465 SER B 115
REMARK 465 SER B 116
REMARK 465 ASP B 117
REMARK 465 SER B 118
REMARK 465 GLY B 119
REMARK 465 THR B 120
REMARK 465 SER B 121
REMARK 465 VAL B 122
REMARK 465 SER B 123
REMARK 465 GLU B 124
REMARK 465 ASN B 125
REMARK 465 GLY C 16
REMARK 465 SER C 17
REMARK 465 GLU C 69
REMARK 465 LYS C 70
REMARK 465 GLN C 71
REMARK 465 VAL C 108
REMARK 465 VAL C 109
REMARK 465 VAL C 110
REMARK 465 ASN C 111
REMARK 465 GLN C 112
REMARK 465 GLN C 113
REMARK 465 GLU C 114
REMARK 465 SER C 115
REMARK 465 SER C 116
REMARK 465 ASP C 117
REMARK 465 SER C 118
REMARK 465 GLY C 119
REMARK 465 THR C 120
REMARK 465 SER C 121
REMARK 465 VAL C 122
REMARK 465 SER C 123
REMARK 465 GLU C 124
REMARK 465 ASN C 125
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 TYR A 48 N CA C O CB CG CD1
REMARK 480 TYR A 48 CD2 CE1 CE2 CZ OH
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HG22 ILE A 19 O HOH A 301 1.36
REMARK 500 HG23 ILE B 74 O HOH B 301 1.48
REMARK 500 O HOH B 318 O HOH B 347 1.53
REMARK 500 O HOH A 327 O HOH A 328 1.73
REMARK 500 O HOH C 326 O HOH C 340 1.93
REMARK 500 CG2 ILE B 74 O HOH B 301 2.02
REMARK 500 O PRO A 20 O HOH A 301 2.10
REMARK 500 O VAL B 75 O HOH B 301 2.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 GLN A 44 60.92 -115.84
REMARK 500 GLN B 44 57.11 -113.09
REMARK 500 GLU B 69 -37.54 121.49
REMARK 500 GLN C 44 60.37 -113.01
REMARK 500
REMARK 500 REMARK: NULL
DBREF 8PWC A 17 125 UNP Q00987 MDM2_HUMAN 17 125
DBREF 8PWC B 17 125 UNP Q00987 MDM2_HUMAN 17 125
DBREF 8PWC C 17 125 UNP Q00987 MDM2_HUMAN 17 125
SEQADV 8PWC GLY A 16 UNP Q00987 EXPRESSION TAG
SEQADV 8PWC GLY B 16 UNP Q00987 EXPRESSION TAG
SEQADV 8PWC GLY C 16 UNP Q00987 EXPRESSION TAG
SEQRES 1 A 110 GLY SER GLN ILE PRO ALA SER GLU GLN GLU THR LEU VAL
SEQRES 2 A 110 ARG PRO LYS PRO LEU LEU LEU LYS LEU LEU LYS SER VAL
SEQRES 3 A 110 GLY ALA GLN LYS ASP THR TYR THR MET LYS GLU VAL LEU
SEQRES 4 A 110 PHE TYR LEU GLY GLN TYR ILE MET THR LYS ARG LEU TYR
SEQRES 5 A 110 ASP GLU LYS GLN GLN HIS ILE VAL TYR CYS SER ASN ASP
SEQRES 6 A 110 LEU LEU GLY ASP LEU PHE GLY VAL PRO SER PHE SER VAL
SEQRES 7 A 110 LYS GLU HIS ARG LYS ILE TYR THR MET ILE TYR ARG ASN
SEQRES 8 A 110 LEU VAL VAL VAL ASN GLN GLN GLU SER SER ASP SER GLY
SEQRES 9 A 110 THR SER VAL SER GLU ASN
SEQRES 1 B 110 GLY SER GLN ILE PRO ALA SER GLU GLN GLU THR LEU VAL
SEQRES 2 B 110 ARG PRO LYS PRO LEU LEU LEU LYS LEU LEU LYS SER VAL
SEQRES 3 B 110 GLY ALA GLN LYS ASP THR TYR THR MET LYS GLU VAL LEU
SEQRES 4 B 110 PHE TYR LEU GLY GLN TYR ILE MET THR LYS ARG LEU TYR
SEQRES 5 B 110 ASP GLU LYS GLN GLN HIS ILE VAL TYR CYS SER ASN ASP
SEQRES 6 B 110 LEU LEU GLY ASP LEU PHE GLY VAL PRO SER PHE SER VAL
SEQRES 7 B 110 LYS GLU HIS ARG LYS ILE TYR THR MET ILE TYR ARG ASN
SEQRES 8 B 110 LEU VAL VAL VAL ASN GLN GLN GLU SER SER ASP SER GLY
SEQRES 9 B 110 THR SER VAL SER GLU ASN
SEQRES 1 C 110 GLY SER GLN ILE PRO ALA SER GLU GLN GLU THR LEU VAL
SEQRES 2 C 110 ARG PRO LYS PRO LEU LEU LEU LYS LEU LEU LYS SER VAL
SEQRES 3 C 110 GLY ALA GLN LYS ASP THR TYR THR MET LYS GLU VAL LEU
SEQRES 4 C 110 PHE TYR LEU GLY GLN TYR ILE MET THR LYS ARG LEU TYR
SEQRES 5 C 110 ASP GLU LYS GLN GLN HIS ILE VAL TYR CYS SER ASN ASP
SEQRES 6 C 110 LEU LEU GLY ASP LEU PHE GLY VAL PRO SER PHE SER VAL
SEQRES 7 C 110 LYS GLU HIS ARG LYS ILE TYR THR MET ILE TYR ARG ASN
SEQRES 8 C 110 LEU VAL VAL VAL ASN GLN GLN GLU SER SER ASP SER GLY
SEQRES 9 C 110 THR SER VAL SER GLU ASN
HET G7I A 201 65
HET G7I B 201 65
HET G7I C 201 65
HETNAM G7I BRIGIMADLIN
FORMUL 4 G7I 3(C31 H25 CL2 F N4 O3)
FORMUL 7 HOH *215(H2 O)
HELIX 1 AA1 PRO A 20 GLU A 25 1 6
HELIX 2 AA2 LYS A 31 VAL A 41 1 11
HELIX 3 AA3 MET A 50 LYS A 64 1 15
HELIX 4 AA4 ASP A 80 GLY A 87 1 8
HELIX 5 AA5 GLU A 95 ARG A 105 1 11
HELIX 6 AA6 PRO B 20 GLU B 25 1 6
HELIX 7 AA7 LYS B 31 VAL B 41 1 11
HELIX 8 AA8 MET B 50 LYS B 64 1 15
HELIX 9 AA9 ASP B 80 GLY B 87 1 8
HELIX 10 AB1 GLU B 95 ARG B 105 1 11
HELIX 11 AB2 PRO C 20 GLU C 25 1 6
HELIX 12 AB3 LYS C 31 VAL C 41 1 11
HELIX 13 AB4 MET C 50 LYS C 64 1 15
HELIX 14 AB5 ASP C 80 GLY C 87 1 8
HELIX 15 AB6 GLU C 95 ARG C 105 1 11
SHEET 1 AA1 2 LEU A 27 VAL A 28 0
SHEET 2 AA1 2 TYR A 48 THR A 49 -1 O TYR A 48 N VAL A 28
SHEET 1 AA2 2 ILE A 74 TYR A 76 0
SHEET 2 AA2 2 SER A 90 SER A 92 -1 O PHE A 91 N VAL A 75
SHEET 1 AA3 2 LEU B 27 VAL B 28 0
SHEET 2 AA3 2 TYR B 48 THR B 49 -1 O TYR B 48 N VAL B 28
SHEET 1 AA4 2 ILE B 74 TYR B 76 0
SHEET 2 AA4 2 SER B 90 SER B 92 -1 O PHE B 91 N VAL B 75
SHEET 1 AA5 2 LEU C 27 VAL C 28 0
SHEET 2 AA5 2 TYR C 48 THR C 49 -1 O TYR C 48 N VAL C 28
SHEET 1 AA6 2 ILE C 74 TYR C 76 0
SHEET 2 AA6 2 SER C 90 SER C 92 -1 O PHE C 91 N VAL C 75
CRYST1 83.207 83.207 42.056 90.00 90.00 120.00 P 32 9
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012018 0.006939 0.000000 0.00000
SCALE2 0.000000 0.013877 0.000000 0.00000
SCALE3 0.000000 0.000000 0.023778 0.00000