HEADER OXIDOREDUCTASE 23-JUL-23 8PXE TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DIMERISATION DOMAIN OF HH1141 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISULFIDE ISOMERASE DSBG N-TERMINAL DOMAIN-CONTAINING COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: APPEARS TO BE PROTEOLYTICALLY CLEAVED IN THE COMPND 7 CRYSTALLIZATION DROP. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER HEPATICUS ATCC 51449; SOURCE 3 ORGANISM_TAXID: 235279; SOURCE 4 GENE: HH_1141; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: (DE3) LACIQ; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DISULFIDE BONDS, DSB, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.WILK,P.ROSZCZENKO-JASINSKA,E.K.JAGUSZTYN-KRYNICKA REVDAT 1 07-AUG-24 8PXE 0 JRNL AUTH P.ROSZCZENKO-JASINSKA JRNL TITL CRYSTAL STRUCTURES OF DISULFIDE OXIDOREDUCTASE/ISOMERASE JRNL TITL 2 FROM HELICOBACTER HEPATICUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.1_3469 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 4360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.6700 - 4.0700 1.00 2142 113 0.1646 0.2169 REMARK 3 2 4.0700 - 3.2300 1.00 2000 105 0.2408 0.3242 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.424 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.431 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 112.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 104.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 1236 REMARK 3 ANGLE : 1.664 1658 REMARK 3 CHIRALITY : 0.082 203 REMARK 3 PLANARITY : 0.008 207 REMARK 3 DIHEDRAL : 3.032 770 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8809 27.6583 28.5912 REMARK 3 T TENSOR REMARK 3 T11: 0.9489 T22: 0.7689 REMARK 3 T33: 1.1013 T12: -0.0182 REMARK 3 T13: -0.1369 T23: -0.1804 REMARK 3 L TENSOR REMARK 3 L11: 0.1283 L22: 1.0847 REMARK 3 L33: 0.5280 L12: -0.3728 REMARK 3 L13: 0.2597 L23: -0.7550 REMARK 3 S TENSOR REMARK 3 S11: -0.1889 S12: -0.4929 S13: -0.8860 REMARK 3 S21: 0.9882 S22: 0.4972 S23: 1.1288 REMARK 3 S31: -1.0669 S32: 0.4661 S33: 0.0680 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0165 21.1102 31.8350 REMARK 3 T TENSOR REMARK 3 T11: 0.7297 T22: 0.9340 REMARK 3 T33: 0.9828 T12: -0.0080 REMARK 3 T13: 0.0253 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.2685 L22: 0.0401 REMARK 3 L33: 0.2390 L12: 0.0994 REMARK 3 L13: 0.2384 L23: 0.1013 REMARK 3 S TENSOR REMARK 3 S11: -0.3961 S12: -0.4251 S13: -0.9837 REMARK 3 S21: 0.0981 S22: 0.2852 S23: 0.7794 REMARK 3 S31: 0.0251 S32: 0.1393 S33: 0.0017 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3371 20.4100 20.8192 REMARK 3 T TENSOR REMARK 3 T11: 0.7145 T22: 0.8716 REMARK 3 T33: 0.7245 T12: 0.0840 REMARK 3 T13: 0.0707 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 1.1272 L22: 0.5774 REMARK 3 L33: 1.1603 L12: -0.4912 REMARK 3 L13: 0.8926 L23: 0.0195 REMARK 3 S TENSOR REMARK 3 S11: 0.1210 S12: 0.0114 S13: -0.1615 REMARK 3 S21: -0.2292 S22: 0.0605 S23: -0.2460 REMARK 3 S31: -0.3287 S32: 0.3784 S33: -0.0008 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0888 12.9196 20.7428 REMARK 3 T TENSOR REMARK 3 T11: 1.2779 T22: 1.3247 REMARK 3 T33: 1.8843 T12: 0.8336 REMARK 3 T13: 0.0194 T23: 0.5123 REMARK 3 L TENSOR REMARK 3 L11: 0.6399 L22: 0.2197 REMARK 3 L33: 0.4469 L12: 0.0394 REMARK 3 L13: 0.4572 L23: 0.1897 REMARK 3 S TENSOR REMARK 3 S11: -0.6908 S12: -0.7531 S13: 0.0061 REMARK 3 S21: 0.6999 S22: 0.2826 S23: 0.0217 REMARK 3 S31: -0.3693 S32: -0.2494 S33: -0.1370 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2146 21.9359 6.7495 REMARK 3 T TENSOR REMARK 3 T11: 0.9378 T22: 0.8779 REMARK 3 T33: 0.6909 T12: 0.1181 REMARK 3 T13: 0.0413 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 1.5181 L22: 0.5777 REMARK 3 L33: 0.9261 L12: 0.4181 REMARK 3 L13: 0.6239 L23: -0.3989 REMARK 3 S TENSOR REMARK 3 S11: 0.0340 S12: 0.2400 S13: 0.3548 REMARK 3 S21: -0.3232 S22: 0.0321 S23: -0.0996 REMARK 3 S31: -0.2040 S32: 0.6225 S33: 0.0002 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3760 20.8153 9.5760 REMARK 3 T TENSOR REMARK 3 T11: 1.0969 T22: 1.0768 REMARK 3 T33: 1.5803 T12: -0.0560 REMARK 3 T13: -0.0763 T23: -0.2065 REMARK 3 L TENSOR REMARK 3 L11: 0.1526 L22: 2.0749 REMARK 3 L33: 2.5625 L12: -0.2105 REMARK 3 L13: 0.2475 L23: -2.3053 REMARK 3 S TENSOR REMARK 3 S11: -0.3477 S12: 0.8824 S13: -1.1586 REMARK 3 S21: -1.5831 S22: 0.4426 S23: 0.3390 REMARK 3 S31: 1.4817 S32: 0.6536 S33: 0.0658 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 2 THROUGH 16 OR REMARK 3 RESID 18 THROUGH 20 OR RESID 22 THROUGH REMARK 3 79 OR RESID 81)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 2 THROUGH 16 OR REMARK 3 RESID 18 THROUGH 20 OR RESID 22 THROUGH REMARK 3 79 OR RESID 81)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8PXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292130570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT, CRYOCOOLED REMARK 200 OPTICS : ELLIPTICALLY BENT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4360 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.230 REMARK 200 RESOLUTION RANGE LOW (A) : 46.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.14 REMARK 200 R MERGE (I) : 0.17000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.43 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.73200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PACT F8 | 0.2 M SODIUM SULFATE, 0.1 M REMARK 280 BIS TRIS PROPANE 6.5, 20 % W/V PEG 3350. 30% EDO USED AS REMARK 280 CRYOPROTECTANT., PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.62250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.00200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.00200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.31125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.00200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.00200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.93375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.00200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.00200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.31125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.00200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.00200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.93375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.62250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 82 REMARK 465 GLN A 83 REMARK 465 SER A 84 REMARK 465 GLU A 85 REMARK 465 SER A 86 REMARK 465 LYS A 87 REMARK 465 PRO A 88 REMARK 465 ASP A 89 REMARK 465 LYS A 90 REMARK 465 ALA A 91 REMARK 465 ILE A 92 REMARK 465 LEU A 93 REMARK 465 ASP A 94 REMARK 465 THR A 95 REMARK 465 LEU A 96 REMARK 465 PHE A 97 REMARK 465 LYS A 98 REMARK 465 LYS A 99 REMARK 465 ILE A 100 REMARK 465 PRO A 101 REMARK 465 GLN A 102 REMARK 465 ASP A 103 REMARK 465 GLU A 104 REMARK 465 TYR A 105 REMARK 465 ILE A 106 REMARK 465 ILE A 107 REMARK 465 LEU A 108 REMARK 465 ARG A 109 REMARK 465 SER A 110 REMARK 465 PRO A 111 REMARK 465 ASN A 112 REMARK 465 LYS A 113 REMARK 465 ASN A 114 REMARK 465 ALA A 115 REMARK 465 LYS A 116 REMARK 465 LYS A 117 REMARK 465 ILE A 118 REMARK 465 THR A 119 REMARK 465 TYR A 120 REMARK 465 ILE A 121 REMARK 465 VAL A 122 REMARK 465 SER A 123 REMARK 465 ASP A 124 REMARK 465 PRO A 125 REMARK 465 ASN A 126 REMARK 465 CYS A 127 REMARK 465 PRO A 128 REMARK 465 SER A 129 REMARK 465 CYS A 130 REMARK 465 GLN A 131 REMARK 465 LYS A 132 REMARK 465 GLU A 133 REMARK 465 LEU A 134 REMARK 465 ASN A 135 REMARK 465 ASN A 136 REMARK 465 ILE A 137 REMARK 465 GLN A 138 REMARK 465 GLU A 139 REMARK 465 ARG A 140 REMARK 465 LEU A 141 REMARK 465 LYS A 142 REMARK 465 ASP A 143 REMARK 465 SER A 144 REMARK 465 ASP A 145 REMARK 465 VAL A 146 REMARK 465 TYR A 147 REMARK 465 MET A 148 REMARK 465 LEU A 149 REMARK 465 LEU A 150 REMARK 465 VAL A 151 REMARK 465 GLY A 152 REMARK 465 PHE A 153 REMARK 465 VAL A 154 REMARK 465 GLY A 155 REMARK 465 GLU A 156 REMARK 465 ASP A 157 REMARK 465 SER A 158 REMARK 465 PRO A 159 REMARK 465 ILE A 160 REMARK 465 LYS A 161 REMARK 465 SER A 162 REMARK 465 SER A 163 REMARK 465 MET A 164 REMARK 465 LEU A 165 REMARK 465 ARG A 166 REMARK 465 ASP A 167 REMARK 465 ARG A 168 REMARK 465 LEU A 169 REMARK 465 LEU A 170 REMARK 465 ASP A 171 REMARK 465 VAL A 172 REMARK 465 LYS A 173 REMARK 465 ASP A 174 REMARK 465 ASP A 175 REMARK 465 LYS A 176 REMARK 465 GLU A 177 REMARK 465 LYS A 178 REMARK 465 LEU A 179 REMARK 465 LYS A 180 REMARK 465 ILE A 181 REMARK 465 LEU A 182 REMARK 465 ARG A 183 REMARK 465 GLU A 184 REMARK 465 VAL A 185 REMARK 465 TYR A 186 REMARK 465 THR A 187 REMARK 465 PRO A 188 REMARK 465 LYS A 189 REMARK 465 SER A 190 REMARK 465 LYS A 191 REMARK 465 VAL A 192 REMARK 465 PRO A 193 REMARK 465 THR A 194 REMARK 465 SER A 195 REMARK 465 TYR A 196 REMARK 465 ILE A 197 REMARK 465 ASN A 198 REMARK 465 ILE A 199 REMARK 465 ASP A 200 REMARK 465 ILE A 201 REMARK 465 LYS A 202 REMARK 465 ASP A 203 REMARK 465 THR A 204 REMARK 465 MET A 205 REMARK 465 LYS A 206 REMARK 465 ILE A 207 REMARK 465 ASN A 208 REMARK 465 GLN A 209 REMARK 465 LYS A 210 REMARK 465 VAL A 211 REMARK 465 ILE A 212 REMARK 465 ASP A 213 REMARK 465 ALA A 214 REMARK 465 GLY A 215 REMARK 465 ILE A 216 REMARK 465 LYS A 217 REMARK 465 SER A 218 REMARK 465 VAL A 219 REMARK 465 PRO A 220 REMARK 465 PHE A 221 REMARK 465 VAL A 222 REMARK 465 TYR A 223 REMARK 465 GLU A 224 REMARK 465 ARG A 225 REMARK 465 ASN A 226 REMARK 465 LYS A 227 REMARK 465 LEU A 228 REMARK 465 GLU A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 MET B 1 REMARK 465 SER B 84 REMARK 465 GLU B 85 REMARK 465 SER B 86 REMARK 465 LYS B 87 REMARK 465 PRO B 88 REMARK 465 ASP B 89 REMARK 465 LYS B 90 REMARK 465 ALA B 91 REMARK 465 ILE B 92 REMARK 465 LEU B 93 REMARK 465 ASP B 94 REMARK 465 THR B 95 REMARK 465 LEU B 96 REMARK 465 PHE B 97 REMARK 465 LYS B 98 REMARK 465 LYS B 99 REMARK 465 ILE B 100 REMARK 465 PRO B 101 REMARK 465 GLN B 102 REMARK 465 ASP B 103 REMARK 465 GLU B 104 REMARK 465 TYR B 105 REMARK 465 ILE B 106 REMARK 465 ILE B 107 REMARK 465 LEU B 108 REMARK 465 ARG B 109 REMARK 465 SER B 110 REMARK 465 PRO B 111 REMARK 465 ASN B 112 REMARK 465 LYS B 113 REMARK 465 ASN B 114 REMARK 465 ALA B 115 REMARK 465 LYS B 116 REMARK 465 LYS B 117 REMARK 465 ILE B 118 REMARK 465 THR B 119 REMARK 465 TYR B 120 REMARK 465 ILE B 121 REMARK 465 VAL B 122 REMARK 465 SER B 123 REMARK 465 ASP B 124 REMARK 465 PRO B 125 REMARK 465 ASN B 126 REMARK 465 CYS B 127 REMARK 465 PRO B 128 REMARK 465 SER B 129 REMARK 465 CYS B 130 REMARK 465 GLN B 131 REMARK 465 LYS B 132 REMARK 465 GLU B 133 REMARK 465 LEU B 134 REMARK 465 ASN B 135 REMARK 465 ASN B 136 REMARK 465 ILE B 137 REMARK 465 GLN B 138 REMARK 465 GLU B 139 REMARK 465 ARG B 140 REMARK 465 LEU B 141 REMARK 465 LYS B 142 REMARK 465 ASP B 143 REMARK 465 SER B 144 REMARK 465 ASP B 145 REMARK 465 VAL B 146 REMARK 465 TYR B 147 REMARK 465 MET B 148 REMARK 465 LEU B 149 REMARK 465 LEU B 150 REMARK 465 VAL B 151 REMARK 465 GLY B 152 REMARK 465 PHE B 153 REMARK 465 VAL B 154 REMARK 465 GLY B 155 REMARK 465 GLU B 156 REMARK 465 ASP B 157 REMARK 465 SER B 158 REMARK 465 PRO B 159 REMARK 465 ILE B 160 REMARK 465 LYS B 161 REMARK 465 SER B 162 REMARK 465 SER B 163 REMARK 465 MET B 164 REMARK 465 LEU B 165 REMARK 465 ARG B 166 REMARK 465 ASP B 167 REMARK 465 ARG B 168 REMARK 465 LEU B 169 REMARK 465 LEU B 170 REMARK 465 ASP B 171 REMARK 465 VAL B 172 REMARK 465 LYS B 173 REMARK 465 ASP B 174 REMARK 465 ASP B 175 REMARK 465 LYS B 176 REMARK 465 GLU B 177 REMARK 465 LYS B 178 REMARK 465 LEU B 179 REMARK 465 LYS B 180 REMARK 465 ILE B 181 REMARK 465 LEU B 182 REMARK 465 ARG B 183 REMARK 465 GLU B 184 REMARK 465 VAL B 185 REMARK 465 TYR B 186 REMARK 465 THR B 187 REMARK 465 PRO B 188 REMARK 465 LYS B 189 REMARK 465 SER B 190 REMARK 465 LYS B 191 REMARK 465 VAL B 192 REMARK 465 PRO B 193 REMARK 465 THR B 194 REMARK 465 SER B 195 REMARK 465 TYR B 196 REMARK 465 ILE B 197 REMARK 465 ASN B 198 REMARK 465 ILE B 199 REMARK 465 ASP B 200 REMARK 465 ILE B 201 REMARK 465 LYS B 202 REMARK 465 ASP B 203 REMARK 465 THR B 204 REMARK 465 MET B 205 REMARK 465 LYS B 206 REMARK 465 ILE B 207 REMARK 465 ASN B 208 REMARK 465 GLN B 209 REMARK 465 LYS B 210 REMARK 465 VAL B 211 REMARK 465 ILE B 212 REMARK 465 ASP B 213 REMARK 465 ALA B 214 REMARK 465 GLY B 215 REMARK 465 ILE B 216 REMARK 465 LYS B 217 REMARK 465 SER B 218 REMARK 465 VAL B 219 REMARK 465 PRO B 220 REMARK 465 PHE B 221 REMARK 465 VAL B 222 REMARK 465 TYR B 223 REMARK 465 GLU B 224 REMARK 465 ARG B 225 REMARK 465 ASN B 226 REMARK 465 LYS B 227 REMARK 465 LEU B 228 REMARK 465 GLU B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 465 HIS B 234 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 38 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 64 115.02 -160.13 REMARK 500 LYS B 17 44.47 36.65 REMARK 500 REMARK 500 REMARK: NULL DBREF 8PXE A 2 227 UNP Q7VH26 Q7VH26_HELHP 23 248 DBREF 8PXE B 2 227 UNP Q7VH26 Q7VH26_HELHP 23 248 SEQADV 8PXE MET A 1 UNP Q7VH26 INITIATING METHIONINE SEQADV 8PXE LEU A 228 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE GLU A 229 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS A 230 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS A 231 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS A 232 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS A 233 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS A 234 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS A 235 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS A 236 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE MET B 1 UNP Q7VH26 INITIATING METHIONINE SEQADV 8PXE LEU B 228 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE GLU B 229 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS B 230 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS B 231 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS B 232 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS B 233 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS B 234 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS B 235 UNP Q7VH26 EXPRESSION TAG SEQADV 8PXE HIS B 236 UNP Q7VH26 EXPRESSION TAG SEQRES 1 A 236 MET ALA SER PHE GLU ASP THR LEU LYS ALA THR ILE LYS SEQRES 2 A 236 SER ASN THR LYS GLN ASP ILE LYS ILE LEU LYS ILE GLN SEQRES 3 A 236 ASN LEU GLN SER SER PRO ASP VAL LYS LEU VAL LEU ILE SEQRES 4 A 236 ALA VAL GLY ASN MET GLN VAL PRO ILE PHE ALA SER LYS SEQRES 5 A 236 ASP GLY LYS LEU VAL MET GLY VAL SER ASN VAL PHE PHE SEQRES 6 A 236 ALA HIS LYS SER GLU ASP MET GLY ALA VAL GLY SER LEU SEQRES 7 A 236 ILE LYS GLN THR GLN SER GLU SER LYS PRO ASP LYS ALA SEQRES 8 A 236 ILE LEU ASP THR LEU PHE LYS LYS ILE PRO GLN ASP GLU SEQRES 9 A 236 TYR ILE ILE LEU ARG SER PRO ASN LYS ASN ALA LYS LYS SEQRES 10 A 236 ILE THR TYR ILE VAL SER ASP PRO ASN CYS PRO SER CYS SEQRES 11 A 236 GLN LYS GLU LEU ASN ASN ILE GLN GLU ARG LEU LYS ASP SEQRES 12 A 236 SER ASP VAL TYR MET LEU LEU VAL GLY PHE VAL GLY GLU SEQRES 13 A 236 ASP SER PRO ILE LYS SER SER MET LEU ARG ASP ARG LEU SEQRES 14 A 236 LEU ASP VAL LYS ASP ASP LYS GLU LYS LEU LYS ILE LEU SEQRES 15 A 236 ARG GLU VAL TYR THR PRO LYS SER LYS VAL PRO THR SER SEQRES 16 A 236 TYR ILE ASN ILE ASP ILE LYS ASP THR MET LYS ILE ASN SEQRES 17 A 236 GLN LYS VAL ILE ASP ALA GLY ILE LYS SER VAL PRO PHE SEQRES 18 A 236 VAL TYR GLU ARG ASN LYS LEU GLU HIS HIS HIS HIS HIS SEQRES 19 A 236 HIS HIS SEQRES 1 B 236 MET ALA SER PHE GLU ASP THR LEU LYS ALA THR ILE LYS SEQRES 2 B 236 SER ASN THR LYS GLN ASP ILE LYS ILE LEU LYS ILE GLN SEQRES 3 B 236 ASN LEU GLN SER SER PRO ASP VAL LYS LEU VAL LEU ILE SEQRES 4 B 236 ALA VAL GLY ASN MET GLN VAL PRO ILE PHE ALA SER LYS SEQRES 5 B 236 ASP GLY LYS LEU VAL MET GLY VAL SER ASN VAL PHE PHE SEQRES 6 B 236 ALA HIS LYS SER GLU ASP MET GLY ALA VAL GLY SER LEU SEQRES 7 B 236 ILE LYS GLN THR GLN SER GLU SER LYS PRO ASP LYS ALA SEQRES 8 B 236 ILE LEU ASP THR LEU PHE LYS LYS ILE PRO GLN ASP GLU SEQRES 9 B 236 TYR ILE ILE LEU ARG SER PRO ASN LYS ASN ALA LYS LYS SEQRES 10 B 236 ILE THR TYR ILE VAL SER ASP PRO ASN CYS PRO SER CYS SEQRES 11 B 236 GLN LYS GLU LEU ASN ASN ILE GLN GLU ARG LEU LYS ASP SEQRES 12 B 236 SER ASP VAL TYR MET LEU LEU VAL GLY PHE VAL GLY GLU SEQRES 13 B 236 ASP SER PRO ILE LYS SER SER MET LEU ARG ASP ARG LEU SEQRES 14 B 236 LEU ASP VAL LYS ASP ASP LYS GLU LYS LEU LYS ILE LEU SEQRES 15 B 236 ARG GLU VAL TYR THR PRO LYS SER LYS VAL PRO THR SER SEQRES 16 B 236 TYR ILE ASN ILE ASP ILE LYS ASP THR MET LYS ILE ASN SEQRES 17 B 236 GLN LYS VAL ILE ASP ALA GLY ILE LYS SER VAL PRO PHE SEQRES 18 B 236 VAL TYR GLU ARG ASN LYS LEU GLU HIS HIS HIS HIS HIS SEQRES 19 B 236 HIS HIS HELIX 1 AA1 SER A 3 LYS A 17 1 15 HELIX 2 AA2 SER A 69 LYS A 80 1 12 HELIX 3 AA3 SER B 3 LYS B 17 1 15 HELIX 4 AA4 SER B 69 GLN B 83 1 15 SHEET 1 AA1 5 LYS A 21 GLN A 26 0 SHEET 2 AA1 5 VAL A 34 VAL A 41 -1 O LEU A 36 N GLN A 26 SHEET 3 AA1 5 MET A 44 SER A 51 -1 O VAL A 46 N ILE A 39 SHEET 4 AA1 5 LEU A 56 GLY A 59 -1 O MET A 58 N PHE A 49 SHEET 5 AA1 5 PHE B 64 ALA B 66 -1 O PHE B 65 N VAL A 57 SHEET 1 AA2 5 PHE A 64 ALA A 66 0 SHEET 2 AA2 5 LEU B 56 GLY B 59 -1 O VAL B 57 N PHE A 65 SHEET 3 AA2 5 MET B 44 SER B 51 -1 N PHE B 49 O MET B 58 SHEET 4 AA2 5 VAL B 34 VAL B 41 -1 N VAL B 41 O MET B 44 SHEET 5 AA2 5 LYS B 21 ASN B 27 -1 N GLN B 26 O LEU B 36 CRYST1 66.004 66.004 113.245 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015151 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015151 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008830 0.00000