data_8PXY # _entry.id 8PXY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8PXY pdb_00008pxy 10.2210/pdb8pxy/pdb WWPDB D_1292132157 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-08-07 2 'Structure model' 2 0 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Source and taxonomy' 6 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' citation 4 2 'Structure model' citation_author 5 2 'Structure model' entity_src_nat 6 2 'Structure model' pdbx_entry_details 7 2 'Structure model' pdbx_modification_feature 8 2 'Structure model' pdbx_molecule_features 9 2 'Structure model' pdbx_poly_seq_scheme 10 2 'Structure model' pdbx_validate_main_chain_plane 11 2 'Structure model' pdbx_validate_rmsd_bond 12 2 'Structure model' pdbx_validate_torsion 13 2 'Structure model' struct_conn 14 2 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.auth_seq_id' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_citation.country' 4 2 'Structure model' '_citation.journal_abbrev' 5 2 'Structure model' '_citation.journal_id_CSD' 6 2 'Structure model' '_citation.journal_id_ISSN' 7 2 'Structure model' '_citation.journal_volume' 8 2 'Structure model' '_citation.page_first' 9 2 'Structure model' '_citation.page_last' 10 2 'Structure model' '_citation.pdbx_database_id_DOI' 11 2 'Structure model' '_citation.pdbx_database_id_PubMed' 12 2 'Structure model' '_citation.title' 13 2 'Structure model' '_citation.year' 14 2 'Structure model' '_entity_src_nat.pdbx_ncbi_taxonomy_id' 15 2 'Structure model' '_entity_src_nat.pdbx_organism_scientific' 16 2 'Structure model' '_pdbx_entry_details.compound_details' 17 2 'Structure model' '_pdbx_entry_details.has_protein_modification' 18 2 'Structure model' '_pdbx_poly_seq_scheme.pdb_seq_num' 19 2 'Structure model' '_pdbx_validate_main_chain_plane.auth_seq_id' 20 2 'Structure model' '_pdbx_validate_rmsd_bond.auth_seq_id_1' 21 2 'Structure model' '_pdbx_validate_rmsd_bond.auth_seq_id_2' 22 2 'Structure model' '_pdbx_validate_torsion.auth_seq_id' 23 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 2 'Structure model' '_struct_ref_seq.db_align_beg' 26 2 'Structure model' '_struct_ref_seq.db_align_end' 27 2 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 28 2 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8PXY _pdbx_database_status.recvd_initial_deposition_date 2023-07-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email christopher.schofield@chem.ox.ac.uk _pdbx_contact_author.name_first Christopher _pdbx_contact_author.name_last Schofield _pdbx_contact_author.name_mi J. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0290-6565 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'de Munnik, M.' 1 ? 'Schofield, C.J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Commun Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2399-3642 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 1173 _citation.page_last 1173 _citation.title ;Biochemical and crystallographic studies of L,D-transpeptidase 2 from Mycobacterium tuberculosis with its natural monomer substrate. ; _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s42003-024-06785-3 _citation.pdbx_database_id_PubMed 39294212 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'de Munnik, M.' 1 0000-0003-0350-395X primary 'Lang, P.A.' 2 0000-0003-3187-1469 primary 'Calvopina, K.' 3 ? primary 'Rabe, P.' 4 0000-0002-3448-9559 primary 'Brem, J.' 5 0000-0002-0137-3226 primary 'Schofield, C.J.' 6 0000-0002-0290-6565 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'L,D-transpeptidase 2' 37993.082 1 2.3.2.- ? ? ? 2 polymer nat 'Peptidoglycan tetrapeptide' 459.496 1 ? ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid' 496.463 1 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 337 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LDT 2,Ldt(Mt2)' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QSDLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGL GGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFYWLNNREVRWRPE HFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYI VGSRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGSLNVSPSNAQWFYDHVKRGD IVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA ; ;QSDLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGL GGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFYWLNNREVRWRPE HFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYI VGSRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGSLNVSPSNAQWFYDHVKRGD IVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA ; A ? 2 'polypeptide(L)' no yes 'A(ZGL)(JGO)(DAL)' AXXA B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 'CHLORIDE ION' CL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 SER n 1 3 ASP n 1 4 LEU n 1 5 LEU n 1 6 VAL n 1 7 PRO n 1 8 LYS n 1 9 LEU n 1 10 THR n 1 11 ALA n 1 12 SER n 1 13 VAL n 1 14 THR n 1 15 ASP n 1 16 GLY n 1 17 ALA n 1 18 VAL n 1 19 GLY n 1 20 VAL n 1 21 THR n 1 22 VAL n 1 23 ASP n 1 24 ALA n 1 25 PRO n 1 26 VAL n 1 27 SER n 1 28 VAL n 1 29 THR n 1 30 ALA n 1 31 ALA n 1 32 ASP n 1 33 GLY n 1 34 VAL n 1 35 LEU n 1 36 ALA n 1 37 ALA n 1 38 VAL n 1 39 THR n 1 40 MET n 1 41 VAL n 1 42 ASN n 1 43 ASP n 1 44 ASN n 1 45 GLY n 1 46 ARG n 1 47 PRO n 1 48 VAL n 1 49 ALA n 1 50 GLY n 1 51 ARG n 1 52 LEU n 1 53 SER n 1 54 PRO n 1 55 ASP n 1 56 GLY n 1 57 LEU n 1 58 ARG n 1 59 TRP n 1 60 SER n 1 61 THR n 1 62 THR n 1 63 GLU n 1 64 GLN n 1 65 LEU n 1 66 GLY n 1 67 TYR n 1 68 ASN n 1 69 ARG n 1 70 ARG n 1 71 TYR n 1 72 THR n 1 73 LEU n 1 74 ASN n 1 75 ALA n 1 76 THR n 1 77 ALA n 1 78 LEU n 1 79 GLY n 1 80 LEU n 1 81 GLY n 1 82 GLY n 1 83 ALA n 1 84 ALA n 1 85 THR n 1 86 ARG n 1 87 GLN n 1 88 LEU n 1 89 THR n 1 90 PHE n 1 91 GLN n 1 92 THR n 1 93 SER n 1 94 SER n 1 95 PRO n 1 96 ALA n 1 97 HIS n 1 98 LEU n 1 99 THR n 1 100 MET n 1 101 PRO n 1 102 TYR n 1 103 VAL n 1 104 MET n 1 105 PRO n 1 106 GLY n 1 107 ASP n 1 108 GLY n 1 109 GLU n 1 110 VAL n 1 111 VAL n 1 112 GLY n 1 113 VAL n 1 114 GLY n 1 115 GLU n 1 116 PRO n 1 117 VAL n 1 118 ALA n 1 119 ILE n 1 120 ARG n 1 121 PHE n 1 122 ASP n 1 123 GLU n 1 124 ASN n 1 125 ILE n 1 126 ALA n 1 127 ASP n 1 128 ARG n 1 129 GLY n 1 130 ALA n 1 131 ALA n 1 132 GLU n 1 133 LYS n 1 134 ALA n 1 135 ILE n 1 136 LYS n 1 137 ILE n 1 138 THR n 1 139 THR n 1 140 ASN n 1 141 PRO n 1 142 PRO n 1 143 VAL n 1 144 GLU n 1 145 GLY n 1 146 ALA n 1 147 PHE n 1 148 TYR n 1 149 TRP n 1 150 LEU n 1 151 ASN n 1 152 ASN n 1 153 ARG n 1 154 GLU n 1 155 VAL n 1 156 ARG n 1 157 TRP n 1 158 ARG n 1 159 PRO n 1 160 GLU n 1 161 HIS n 1 162 PHE n 1 163 TRP n 1 164 LYS n 1 165 PRO n 1 166 GLY n 1 167 THR n 1 168 ALA n 1 169 VAL n 1 170 ASP n 1 171 VAL n 1 172 ALA n 1 173 VAL n 1 174 ASN n 1 175 THR n 1 176 TYR n 1 177 GLY n 1 178 VAL n 1 179 ASP n 1 180 LEU n 1 181 GLY n 1 182 GLU n 1 183 GLY n 1 184 MET n 1 185 PHE n 1 186 GLY n 1 187 GLU n 1 188 ASP n 1 189 ASN n 1 190 VAL n 1 191 GLN n 1 192 THR n 1 193 HIS n 1 194 PHE n 1 195 THR n 1 196 ILE n 1 197 GLY n 1 198 ASP n 1 199 GLU n 1 200 VAL n 1 201 ILE n 1 202 ALA n 1 203 THR n 1 204 ALA n 1 205 ASP n 1 206 ASP n 1 207 ASN n 1 208 THR n 1 209 LYS n 1 210 ILE n 1 211 LEU n 1 212 THR n 1 213 VAL n 1 214 ARG n 1 215 VAL n 1 216 ASN n 1 217 GLY n 1 218 GLU n 1 219 VAL n 1 220 VAL n 1 221 LYS n 1 222 SER n 1 223 MET n 1 224 PRO n 1 225 THR n 1 226 SER n 1 227 MET n 1 228 GLY n 1 229 LYS n 1 230 ASP n 1 231 SER n 1 232 THR n 1 233 PRO n 1 234 THR n 1 235 ALA n 1 236 ASN n 1 237 GLY n 1 238 ILE n 1 239 TYR n 1 240 ILE n 1 241 VAL n 1 242 GLY n 1 243 SER n 1 244 ARG n 1 245 TYR n 1 246 LYS n 1 247 HIS n 1 248 ILE n 1 249 ILE n 1 250 MET n 1 251 ASP n 1 252 SER n 1 253 SER n 1 254 THR n 1 255 TYR n 1 256 GLY n 1 257 VAL n 1 258 PRO n 1 259 VAL n 1 260 ASN n 1 261 SER n 1 262 PRO n 1 263 ASN n 1 264 GLY n 1 265 TYR n 1 266 ARG n 1 267 THR n 1 268 ASP n 1 269 VAL n 1 270 ASP n 1 271 TRP n 1 272 ALA n 1 273 THR n 1 274 GLN n 1 275 ILE n 1 276 SER n 1 277 TYR n 1 278 SER n 1 279 GLY n 1 280 VAL n 1 281 PHE n 1 282 VAL n 1 283 HIS n 1 284 SER n 1 285 ALA n 1 286 PRO n 1 287 TRP n 1 288 SER n 1 289 VAL n 1 290 GLY n 1 291 ALA n 1 292 GLN n 1 293 GLY n 1 294 HIS n 1 295 THR n 1 296 ASN n 1 297 THR n 1 298 SER n 1 299 HIS n 1 300 GLY n 1 301 SER n 1 302 LEU n 1 303 ASN n 1 304 VAL n 1 305 SER n 1 306 PRO n 1 307 SER n 1 308 ASN n 1 309 ALA n 1 310 GLN n 1 311 TRP n 1 312 PHE n 1 313 TYR n 1 314 ASP n 1 315 HIS n 1 316 VAL n 1 317 LYS n 1 318 ARG n 1 319 GLY n 1 320 ASP n 1 321 ILE n 1 322 VAL n 1 323 GLU n 1 324 VAL n 1 325 VAL n 1 326 ASN n 1 327 THR n 1 328 VAL n 1 329 GLY n 1 330 GLY n 1 331 THR n 1 332 LEU n 1 333 PRO n 1 334 GLY n 1 335 ILE n 1 336 ASP n 1 337 GLY n 1 338 LEU n 1 339 GLY n 1 340 ASP n 1 341 TRP n 1 342 ASN n 1 343 ILE n 1 344 PRO n 1 345 TRP n 1 346 ASP n 1 347 GLN n 1 348 TRP n 1 349 ARG n 1 350 ALA n 1 351 GLY n 1 352 ASN n 1 353 ALA n 1 354 LYS n 1 355 ALA n 2 1 ALA n 2 2 ZGL n 2 3 JGO n 2 4 DAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 355 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ldtB, MT2594, V735_02606' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _entity_src_nat.entity_id 2 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 4 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Corynebacterium jeikeium' _entity_src_nat.pdbx_ncbi_taxonomy_id 38289 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGlcpNAcb1-4MurNAc1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[a2122h-1a_1-5_2*NCC/3=O_3*OC^RCO/4=O/3C][a2122h-1b_1-5_2*NCC/3=O]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 3 '[][a-D-GlcpNAc]{[(3+1)][<C3O1>]{}[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 MUB _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JGO 'L-peptide linking' n 'meso-2,6-diaminopimelic acid NH2' '(2S,6R)-2,6,7-tris(azanyl)-7-oxidanylidene-heptanoic acid; (2S,6R)-2,6,7-triamino-7-oxoheptanoic acid' 'C7 H15 N3 O3' 189.212 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MUB 'D-saccharide, alpha linking' . 'N-acetyl-alpha-muramic acid' 'N-acetyl-muramic acid; N-ACETYLMURAMIC ACID' 'C11 H19 N O8' 293.270 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZGL 'D-peptide linking' . D-alpha-glutamine Iso-D-glutamine 'C5 H10 N2 O3' 146.144 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MUB 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc3 MUB 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 MurNAc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 54 ? ? ? A . n A 1 2 SER 2 55 ? ? ? A . n A 1 3 ASP 3 56 ? ? ? A . n A 1 4 LEU 4 57 ? ? ? A . n A 1 5 LEU 5 58 58 LEU LEU A . n A 1 6 VAL 6 59 59 VAL VAL A . n A 1 7 PRO 7 60 60 PRO PRO A . n A 1 8 LYS 8 61 61 LYS LYS A . n A 1 9 LEU 9 62 62 LEU LEU A . n A 1 10 THR 10 63 63 THR THR A . n A 1 11 ALA 11 64 64 ALA ALA A . n A 1 12 SER 12 65 65 SER SER A . n A 1 13 VAL 13 66 66 VAL VAL A . n A 1 14 THR 14 67 67 THR THR A . n A 1 15 ASP 15 68 68 ASP ASP A . n A 1 16 GLY 16 69 69 GLY GLY A . n A 1 17 ALA 17 70 70 ALA ALA A . n A 1 18 VAL 18 71 71 VAL VAL A . n A 1 19 GLY 19 72 72 GLY GLY A . n A 1 20 VAL 20 73 73 VAL VAL A . n A 1 21 THR 21 74 74 THR THR A . n A 1 22 VAL 22 75 75 VAL VAL A . n A 1 23 ASP 23 76 76 ASP ASP A . n A 1 24 ALA 24 77 77 ALA ALA A . n A 1 25 PRO 25 78 78 PRO PRO A . n A 1 26 VAL 26 79 79 VAL VAL A . n A 1 27 SER 27 80 80 SER SER A . n A 1 28 VAL 28 81 81 VAL VAL A . n A 1 29 THR 29 82 82 THR THR A . n A 1 30 ALA 30 83 83 ALA ALA A . n A 1 31 ALA 31 84 84 ALA ALA A . n A 1 32 ASP 32 85 85 ASP ASP A . n A 1 33 GLY 33 86 86 GLY GLY A . n A 1 34 VAL 34 87 87 VAL VAL A . n A 1 35 LEU 35 88 88 LEU LEU A . n A 1 36 ALA 36 89 89 ALA ALA A . n A 1 37 ALA 37 90 90 ALA ALA A . n A 1 38 VAL 38 91 91 VAL VAL A . n A 1 39 THR 39 92 92 THR THR A . n A 1 40 MET 40 93 93 MET MET A . n A 1 41 VAL 41 94 94 VAL VAL A . n A 1 42 ASN 42 95 95 ASN ASN A . n A 1 43 ASP 43 96 96 ASP ASP A . n A 1 44 ASN 44 97 97 ASN ASN A . n A 1 45 GLY 45 98 98 GLY GLY A . n A 1 46 ARG 46 99 99 ARG ARG A . n A 1 47 PRO 47 100 100 PRO PRO A . n A 1 48 VAL 48 101 101 VAL VAL A . n A 1 49 ALA 49 102 102 ALA ALA A . n A 1 50 GLY 50 103 103 GLY GLY A . n A 1 51 ARG 51 104 104 ARG ARG A . n A 1 52 LEU 52 105 105 LEU LEU A . n A 1 53 SER 53 106 106 SER SER A . n A 1 54 PRO 54 107 107 PRO PRO A . n A 1 55 ASP 55 108 108 ASP ASP A . n A 1 56 GLY 56 109 109 GLY GLY A . n A 1 57 LEU 57 110 110 LEU LEU A . n A 1 58 ARG 58 111 111 ARG ARG A . n A 1 59 TRP 59 112 112 TRP TRP A . n A 1 60 SER 60 113 113 SER SER A . n A 1 61 THR 61 114 114 THR THR A . n A 1 62 THR 62 115 115 THR THR A . n A 1 63 GLU 63 116 116 GLU GLU A . n A 1 64 GLN 64 117 117 GLN GLN A . n A 1 65 LEU 65 118 118 LEU LEU A . n A 1 66 GLY 66 119 119 GLY GLY A . n A 1 67 TYR 67 120 120 TYR TYR A . n A 1 68 ASN 68 121 121 ASN ASN A . n A 1 69 ARG 69 122 122 ARG ARG A . n A 1 70 ARG 70 123 123 ARG ARG A . n A 1 71 TYR 71 124 124 TYR TYR A . n A 1 72 THR 72 125 125 THR THR A . n A 1 73 LEU 73 126 126 LEU LEU A . n A 1 74 ASN 74 127 127 ASN ASN A . n A 1 75 ALA 75 128 128 ALA ALA A . n A 1 76 THR 76 129 129 THR THR A . n A 1 77 ALA 77 130 130 ALA ALA A . n A 1 78 LEU 78 131 131 LEU LEU A . n A 1 79 GLY 79 132 132 GLY GLY A . n A 1 80 LEU 80 133 133 LEU LEU A . n A 1 81 GLY 81 134 134 GLY GLY A . n A 1 82 GLY 82 135 135 GLY GLY A . n A 1 83 ALA 83 136 136 ALA ALA A . n A 1 84 ALA 84 137 137 ALA ALA A . n A 1 85 THR 85 138 138 THR THR A . n A 1 86 ARG 86 139 139 ARG ARG A . n A 1 87 GLN 87 140 140 GLN GLN A . n A 1 88 LEU 88 141 141 LEU LEU A . n A 1 89 THR 89 142 142 THR THR A . n A 1 90 PHE 90 143 143 PHE PHE A . n A 1 91 GLN 91 144 144 GLN GLN A . n A 1 92 THR 92 145 145 THR THR A . n A 1 93 SER 93 146 146 SER SER A . n A 1 94 SER 94 147 147 SER SER A . n A 1 95 PRO 95 148 148 PRO PRO A . n A 1 96 ALA 96 149 149 ALA ALA A . n A 1 97 HIS 97 150 150 HIS HIS A . n A 1 98 LEU 98 151 151 LEU LEU A . n A 1 99 THR 99 152 152 THR THR A . n A 1 100 MET 100 153 153 MET MET A . n A 1 101 PRO 101 154 154 PRO PRO A . n A 1 102 TYR 102 155 155 TYR TYR A . n A 1 103 VAL 103 156 156 VAL VAL A . n A 1 104 MET 104 157 157 MET MET A . n A 1 105 PRO 105 158 158 PRO PRO A . n A 1 106 GLY 106 159 159 GLY GLY A . n A 1 107 ASP 107 160 160 ASP ASP A . n A 1 108 GLY 108 161 161 GLY GLY A . n A 1 109 GLU 109 162 162 GLU GLU A . n A 1 110 VAL 110 163 163 VAL VAL A . n A 1 111 VAL 111 164 164 VAL VAL A . n A 1 112 GLY 112 165 165 GLY GLY A . n A 1 113 VAL 113 166 166 VAL VAL A . n A 1 114 GLY 114 167 167 GLY GLY A . n A 1 115 GLU 115 168 168 GLU GLU A . n A 1 116 PRO 116 169 169 PRO PRO A . n A 1 117 VAL 117 170 170 VAL VAL A . n A 1 118 ALA 118 171 171 ALA ALA A . n A 1 119 ILE 119 172 172 ILE ILE A . n A 1 120 ARG 120 173 173 ARG ARG A . n A 1 121 PHE 121 174 174 PHE PHE A . n A 1 122 ASP 122 175 175 ASP ASP A . n A 1 123 GLU 123 176 176 GLU GLU A . n A 1 124 ASN 124 177 177 ASN ASN A . n A 1 125 ILE 125 178 178 ILE ILE A . n A 1 126 ALA 126 179 179 ALA ALA A . n A 1 127 ASP 127 180 180 ASP ASP A . n A 1 128 ARG 128 181 181 ARG ARG A . n A 1 129 GLY 129 182 182 GLY GLY A . n A 1 130 ALA 130 183 183 ALA ALA A . n A 1 131 ALA 131 184 184 ALA ALA A . n A 1 132 GLU 132 185 185 GLU GLU A . n A 1 133 LYS 133 186 186 LYS LYS A . n A 1 134 ALA 134 187 187 ALA ALA A . n A 1 135 ILE 135 188 188 ILE ILE A . n A 1 136 LYS 136 189 189 LYS LYS A . n A 1 137 ILE 137 190 190 ILE ILE A . n A 1 138 THR 138 191 191 THR THR A . n A 1 139 THR 139 192 192 THR THR A . n A 1 140 ASN 140 193 193 ASN ASN A . n A 1 141 PRO 141 194 194 PRO PRO A . n A 1 142 PRO 142 195 195 PRO PRO A . n A 1 143 VAL 143 196 196 VAL VAL A . n A 1 144 GLU 144 197 197 GLU GLU A . n A 1 145 GLY 145 198 198 GLY GLY A . n A 1 146 ALA 146 199 199 ALA ALA A . n A 1 147 PHE 147 200 200 PHE PHE A . n A 1 148 TYR 148 201 201 TYR TYR A . n A 1 149 TRP 149 202 202 TRP TRP A . n A 1 150 LEU 150 203 203 LEU LEU A . n A 1 151 ASN 151 204 204 ASN ASN A . n A 1 152 ASN 152 205 205 ASN ASN A . n A 1 153 ARG 153 206 206 ARG ARG A . n A 1 154 GLU 154 207 207 GLU GLU A . n A 1 155 VAL 155 208 208 VAL VAL A . n A 1 156 ARG 156 209 209 ARG ARG A . n A 1 157 TRP 157 210 210 TRP TRP A . n A 1 158 ARG 158 211 211 ARG ARG A . n A 1 159 PRO 159 212 212 PRO PRO A . n A 1 160 GLU 160 213 213 GLU GLU A . n A 1 161 HIS 161 214 214 HIS HIS A . n A 1 162 PHE 162 215 215 PHE PHE A . n A 1 163 TRP 163 216 216 TRP TRP A . n A 1 164 LYS 164 217 217 LYS LYS A . n A 1 165 PRO 165 218 218 PRO PRO A . n A 1 166 GLY 166 219 219 GLY GLY A . n A 1 167 THR 167 220 220 THR THR A . n A 1 168 ALA 168 221 221 ALA ALA A . n A 1 169 VAL 169 222 222 VAL VAL A . n A 1 170 ASP 170 223 223 ASP ASP A . n A 1 171 VAL 171 224 224 VAL VAL A . n A 1 172 ALA 172 225 225 ALA ALA A . n A 1 173 VAL 173 226 226 VAL VAL A . n A 1 174 ASN 174 227 227 ASN ASN A . n A 1 175 THR 175 228 228 THR THR A . n A 1 176 TYR 176 229 229 TYR TYR A . n A 1 177 GLY 177 230 230 GLY GLY A . n A 1 178 VAL 178 231 231 VAL VAL A . n A 1 179 ASP 179 232 232 ASP ASP A . n A 1 180 LEU 180 233 233 LEU LEU A . n A 1 181 GLY 181 234 234 GLY GLY A . n A 1 182 GLU 182 235 235 GLU GLU A . n A 1 183 GLY 183 236 236 GLY GLY A . n A 1 184 MET 184 237 237 MET MET A . n A 1 185 PHE 185 238 238 PHE PHE A . n A 1 186 GLY 186 239 239 GLY GLY A . n A 1 187 GLU 187 240 240 GLU GLU A . n A 1 188 ASP 188 241 241 ASP ASP A . n A 1 189 ASN 189 242 242 ASN ASN A . n A 1 190 VAL 190 243 243 VAL VAL A . n A 1 191 GLN 191 244 244 GLN GLN A . n A 1 192 THR 192 245 245 THR THR A . n A 1 193 HIS 193 246 246 HIS HIS A . n A 1 194 PHE 194 247 247 PHE PHE A . n A 1 195 THR 195 248 248 THR THR A . n A 1 196 ILE 196 249 249 ILE ILE A . n A 1 197 GLY 197 250 250 GLY GLY A . n A 1 198 ASP 198 251 251 ASP ASP A . n A 1 199 GLU 199 252 252 GLU GLU A . n A 1 200 VAL 200 253 253 VAL VAL A . n A 1 201 ILE 201 254 254 ILE ILE A . n A 1 202 ALA 202 255 255 ALA ALA A . n A 1 203 THR 203 256 256 THR THR A . n A 1 204 ALA 204 257 257 ALA ALA A . n A 1 205 ASP 205 258 258 ASP ASP A . n A 1 206 ASP 206 259 259 ASP ASP A . n A 1 207 ASN 207 260 260 ASN ASN A . n A 1 208 THR 208 261 261 THR THR A . n A 1 209 LYS 209 262 262 LYS LYS A . n A 1 210 ILE 210 263 263 ILE ILE A . n A 1 211 LEU 211 264 264 LEU LEU A . n A 1 212 THR 212 265 265 THR THR A . n A 1 213 VAL 213 266 266 VAL VAL A . n A 1 214 ARG 214 267 267 ARG ARG A . n A 1 215 VAL 215 268 268 VAL VAL A . n A 1 216 ASN 216 269 269 ASN ASN A . n A 1 217 GLY 217 270 270 GLY GLY A . n A 1 218 GLU 218 271 271 GLU GLU A . n A 1 219 VAL 219 272 272 VAL VAL A . n A 1 220 VAL 220 273 273 VAL VAL A . n A 1 221 LYS 221 274 274 LYS LYS A . n A 1 222 SER 222 275 275 SER SER A . n A 1 223 MET 223 276 276 MET MET A . n A 1 224 PRO 224 277 277 PRO PRO A . n A 1 225 THR 225 278 278 THR THR A . n A 1 226 SER 226 279 279 SER SER A . n A 1 227 MET 227 280 280 MET MET A . n A 1 228 GLY 228 281 281 GLY GLY A . n A 1 229 LYS 229 282 282 LYS LYS A . n A 1 230 ASP 230 283 283 ASP ASP A . n A 1 231 SER 231 284 284 SER SER A . n A 1 232 THR 232 285 285 THR THR A . n A 1 233 PRO 233 286 286 PRO PRO A . n A 1 234 THR 234 287 287 THR THR A . n A 1 235 ALA 235 288 288 ALA ALA A . n A 1 236 ASN 236 289 289 ASN ASN A . n A 1 237 GLY 237 290 290 GLY GLY A . n A 1 238 ILE 238 291 291 ILE ILE A . n A 1 239 TYR 239 292 292 TYR TYR A . n A 1 240 ILE 240 293 293 ILE ILE A . n A 1 241 VAL 241 294 294 VAL VAL A . n A 1 242 GLY 242 295 295 GLY GLY A . n A 1 243 SER 243 296 296 SER SER A . n A 1 244 ARG 244 297 297 ARG ARG A . n A 1 245 TYR 245 298 298 TYR TYR A . n A 1 246 LYS 246 299 299 LYS LYS A . n A 1 247 HIS 247 300 300 HIS HIS A . n A 1 248 ILE 248 301 301 ILE ILE A . n A 1 249 ILE 249 302 302 ILE ILE A . n A 1 250 MET 250 303 303 MET MET A . n A 1 251 ASP 251 304 304 ASP ASP A . n A 1 252 SER 252 305 305 SER SER A . n A 1 253 SER 253 306 306 SER SER A . n A 1 254 THR 254 307 307 THR THR A . n A 1 255 TYR 255 308 308 TYR TYR A . n A 1 256 GLY 256 309 309 GLY GLY A . n A 1 257 VAL 257 310 310 VAL VAL A . n A 1 258 PRO 258 311 311 PRO PRO A . n A 1 259 VAL 259 312 312 VAL VAL A . n A 1 260 ASN 260 313 313 ASN ASN A . n A 1 261 SER 261 314 314 SER SER A . n A 1 262 PRO 262 315 315 PRO PRO A . n A 1 263 ASN 263 316 316 ASN ASN A . n A 1 264 GLY 264 317 317 GLY GLY A . n A 1 265 TYR 265 318 318 TYR TYR A . n A 1 266 ARG 266 319 319 ARG ARG A . n A 1 267 THR 267 320 320 THR THR A . n A 1 268 ASP 268 321 321 ASP ASP A . n A 1 269 VAL 269 322 322 VAL VAL A . n A 1 270 ASP 270 323 323 ASP ASP A . n A 1 271 TRP 271 324 324 TRP TRP A . n A 1 272 ALA 272 325 325 ALA ALA A . n A 1 273 THR 273 326 326 THR THR A . n A 1 274 GLN 274 327 327 GLN GLN A . n A 1 275 ILE 275 328 328 ILE ILE A . n A 1 276 SER 276 329 329 SER SER A . n A 1 277 TYR 277 330 330 TYR TYR A . n A 1 278 SER 278 331 331 SER SER A . n A 1 279 GLY 279 332 332 GLY GLY A . n A 1 280 VAL 280 333 333 VAL VAL A . n A 1 281 PHE 281 334 334 PHE PHE A . n A 1 282 VAL 282 335 335 VAL VAL A . n A 1 283 HIS 283 336 336 HIS HIS A . n A 1 284 SER 284 337 337 SER SER A . n A 1 285 ALA 285 338 338 ALA ALA A . n A 1 286 PRO 286 339 339 PRO PRO A . n A 1 287 TRP 287 340 340 TRP TRP A . n A 1 288 SER 288 341 341 SER SER A . n A 1 289 VAL 289 342 342 VAL VAL A . n A 1 290 GLY 290 343 343 GLY GLY A . n A 1 291 ALA 291 344 344 ALA ALA A . n A 1 292 GLN 292 345 345 GLN GLN A . n A 1 293 GLY 293 346 346 GLY GLY A . n A 1 294 HIS 294 347 347 HIS HIS A . n A 1 295 THR 295 348 348 THR THR A . n A 1 296 ASN 296 349 349 ASN ASN A . n A 1 297 THR 297 350 350 THR THR A . n A 1 298 SER 298 351 351 SER SER A . n A 1 299 HIS 299 352 352 HIS HIS A . n A 1 300 GLY 300 353 353 GLY GLY A . n A 1 301 SER 301 354 354 SER SER A . n A 1 302 LEU 302 355 355 LEU LEU A . n A 1 303 ASN 303 356 356 ASN ASN A . n A 1 304 VAL 304 357 357 VAL VAL A . n A 1 305 SER 305 358 358 SER SER A . n A 1 306 PRO 306 359 359 PRO PRO A . n A 1 307 SER 307 360 360 SER SER A . n A 1 308 ASN 308 361 361 ASN ASN A . n A 1 309 ALA 309 362 362 ALA ALA A . n A 1 310 GLN 310 363 363 GLN GLN A . n A 1 311 TRP 311 364 364 TRP TRP A . n A 1 312 PHE 312 365 365 PHE PHE A . n A 1 313 TYR 313 366 366 TYR TYR A . n A 1 314 ASP 314 367 367 ASP ASP A . n A 1 315 HIS 315 368 368 HIS HIS A . n A 1 316 VAL 316 369 369 VAL VAL A . n A 1 317 LYS 317 370 370 LYS LYS A . n A 1 318 ARG 318 371 371 ARG ARG A . n A 1 319 GLY 319 372 372 GLY GLY A . n A 1 320 ASP 320 373 373 ASP ASP A . n A 1 321 ILE 321 374 374 ILE ILE A . n A 1 322 VAL 322 375 375 VAL VAL A . n A 1 323 GLU 323 376 376 GLU GLU A . n A 1 324 VAL 324 377 377 VAL VAL A . n A 1 325 VAL 325 378 378 VAL VAL A . n A 1 326 ASN 326 379 379 ASN ASN A . n A 1 327 THR 327 380 380 THR THR A . n A 1 328 VAL 328 381 381 VAL VAL A . n A 1 329 GLY 329 382 382 GLY GLY A . n A 1 330 GLY 330 383 383 GLY GLY A . n A 1 331 THR 331 384 384 THR THR A . n A 1 332 LEU 332 385 385 LEU LEU A . n A 1 333 PRO 333 386 386 PRO PRO A . n A 1 334 GLY 334 387 387 GLY GLY A . n A 1 335 ILE 335 388 388 ILE ILE A . n A 1 336 ASP 336 389 389 ASP ASP A . n A 1 337 GLY 337 390 390 GLY GLY A . n A 1 338 LEU 338 391 391 LEU LEU A . n A 1 339 GLY 339 392 392 GLY GLY A . n A 1 340 ASP 340 393 393 ASP ASP A . n A 1 341 TRP 341 394 394 TRP TRP A . n A 1 342 ASN 342 395 395 ASN ASN A . n A 1 343 ILE 343 396 396 ILE ILE A . n A 1 344 PRO 344 397 397 PRO PRO A . n A 1 345 TRP 345 398 398 TRP TRP A . n A 1 346 ASP 346 399 399 ASP ASP A . n A 1 347 GLN 347 400 400 GLN GLN A . n A 1 348 TRP 348 401 401 TRP TRP A . n A 1 349 ARG 349 402 402 ARG ARG A . n A 1 350 ALA 350 403 403 ALA ALA A . n A 1 351 GLY 351 404 404 GLY GLY A . n A 1 352 ASN 352 405 405 ASN ASN A . n A 1 353 ALA 353 406 406 ALA ALA A . n A 1 354 LYS 354 407 407 LYS LYS A . n A 1 355 ALA 355 408 ? ? ? A . n B 2 1 ALA 1 1 701 ALA LIG B . n B 2 2 ZGL 2 2 701 ZGL LIG B . n B 2 3 JGO 3 3 701 JGO LIG B . n B 2 4 DAL 4 4 701 DAL LIG B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 MUB 1 C MUB 1 C LIG 701 n C 3 NAG 2 C NAG 2 C LIG 701 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 MUB ? ? MUB ? ? 'SUBJECT OF INVESTIGATION' ? 2 JGO ? ? JGO ? ? 'SUBJECT OF INVESTIGATION' ? 3 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? 4 JGO ? ? JGO ? ? 'SUBJECT OF INVESTIGATION' ? 5 DAL ? ? DAL ? ? 'SUBJECT OF INVESTIGATION' ? 6 JGO ? ? JGO ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EPE 1 501 501 EPE HEP A . E 5 CL 1 502 1 CL CL A . F 6 HOH 1 601 89 HOH HOH A . F 6 HOH 2 602 341 HOH HOH A . F 6 HOH 3 603 86 HOH HOH A . F 6 HOH 4 604 85 HOH HOH A . F 6 HOH 5 605 25 HOH HOH A . F 6 HOH 6 606 70 HOH HOH A . F 6 HOH 7 607 7 HOH HOH A . F 6 HOH 8 608 233 HOH HOH A . F 6 HOH 9 609 354 HOH HOH A . F 6 HOH 10 610 107 HOH HOH A . F 6 HOH 11 611 171 HOH HOH A . F 6 HOH 12 612 253 HOH HOH A . F 6 HOH 13 613 94 HOH HOH A . F 6 HOH 14 614 112 HOH HOH A . F 6 HOH 15 615 214 HOH HOH A . F 6 HOH 16 616 149 HOH HOH A . F 6 HOH 17 617 41 HOH HOH A . F 6 HOH 18 618 32 HOH HOH A . F 6 HOH 19 619 15 HOH HOH A . F 6 HOH 20 620 5 HOH HOH A . F 6 HOH 21 621 208 HOH HOH A . F 6 HOH 22 622 120 HOH HOH A . F 6 HOH 23 623 249 HOH HOH A . F 6 HOH 24 624 100 HOH HOH A . F 6 HOH 25 625 114 HOH HOH A . F 6 HOH 26 626 20 HOH HOH A . F 6 HOH 27 627 10 HOH HOH A . F 6 HOH 28 628 116 HOH HOH A . F 6 HOH 29 629 27 HOH HOH A . F 6 HOH 30 630 84 HOH HOH A . F 6 HOH 31 631 180 HOH HOH A . F 6 HOH 32 632 26 HOH HOH A . F 6 HOH 33 633 286 HOH HOH A . F 6 HOH 34 634 216 HOH HOH A . F 6 HOH 35 635 87 HOH HOH A . F 6 HOH 36 636 169 HOH HOH A . F 6 HOH 37 637 106 HOH HOH A . F 6 HOH 38 638 183 HOH HOH A . F 6 HOH 39 639 76 HOH HOH A . F 6 HOH 40 640 12 HOH HOH A . F 6 HOH 41 641 34 HOH HOH A . F 6 HOH 42 642 184 HOH HOH A . F 6 HOH 43 643 134 HOH HOH A . F 6 HOH 44 644 65 HOH HOH A . F 6 HOH 45 645 175 HOH HOH A . F 6 HOH 46 646 240 HOH HOH A . F 6 HOH 47 647 228 HOH HOH A . F 6 HOH 48 648 78 HOH HOH A . F 6 HOH 49 649 36 HOH HOH A . F 6 HOH 50 650 18 HOH HOH A . F 6 HOH 51 651 101 HOH HOH A . F 6 HOH 52 652 83 HOH HOH A . F 6 HOH 53 653 4 HOH HOH A . F 6 HOH 54 654 16 HOH HOH A . F 6 HOH 55 655 19 HOH HOH A . F 6 HOH 56 656 196 HOH HOH A . F 6 HOH 57 657 9 HOH HOH A . F 6 HOH 58 658 62 HOH HOH A . F 6 HOH 59 659 79 HOH HOH A . F 6 HOH 60 660 14 HOH HOH A . F 6 HOH 61 661 51 HOH HOH A . F 6 HOH 62 662 122 HOH HOH A . F 6 HOH 63 663 244 HOH HOH A . F 6 HOH 64 664 6 HOH HOH A . F 6 HOH 65 665 151 HOH HOH A . F 6 HOH 66 666 337 HOH HOH A . F 6 HOH 67 667 160 HOH HOH A . F 6 HOH 68 668 29 HOH HOH A . F 6 HOH 69 669 213 HOH HOH A . F 6 HOH 70 670 22 HOH HOH A . F 6 HOH 71 671 80 HOH HOH A . F 6 HOH 72 672 60 HOH HOH A . F 6 HOH 73 673 54 HOH HOH A . F 6 HOH 74 674 11 HOH HOH A . F 6 HOH 75 675 48 HOH HOH A . F 6 HOH 76 676 129 HOH HOH A . F 6 HOH 77 677 57 HOH HOH A . F 6 HOH 78 678 261 HOH HOH A . F 6 HOH 79 679 39 HOH HOH A . F 6 HOH 80 680 67 HOH HOH A . F 6 HOH 81 681 61 HOH HOH A . F 6 HOH 82 682 55 HOH HOH A . F 6 HOH 83 683 185 HOH HOH A . F 6 HOH 84 684 215 HOH HOH A . F 6 HOH 85 685 190 HOH HOH A . F 6 HOH 86 686 145 HOH HOH A . F 6 HOH 87 687 88 HOH HOH A . F 6 HOH 88 688 108 HOH HOH A . F 6 HOH 89 689 23 HOH HOH A . F 6 HOH 90 690 136 HOH HOH A . F 6 HOH 91 691 63 HOH HOH A . F 6 HOH 92 692 264 HOH HOH A . F 6 HOH 93 693 115 HOH HOH A . F 6 HOH 94 694 128 HOH HOH A . F 6 HOH 95 695 66 HOH HOH A . F 6 HOH 96 696 72 HOH HOH A . F 6 HOH 97 697 2 HOH HOH A . F 6 HOH 98 698 31 HOH HOH A . F 6 HOH 99 699 231 HOH HOH A . F 6 HOH 100 700 75 HOH HOH A . F 6 HOH 101 701 98 HOH HOH A . F 6 HOH 102 702 91 HOH HOH A . F 6 HOH 103 703 69 HOH HOH A . F 6 HOH 104 704 17 HOH HOH A . F 6 HOH 105 705 44 HOH HOH A . F 6 HOH 106 706 13 HOH HOH A . F 6 HOH 107 707 52 HOH HOH A . F 6 HOH 108 708 232 HOH HOH A . F 6 HOH 109 709 153 HOH HOH A . F 6 HOH 110 710 262 HOH HOH A . F 6 HOH 111 711 275 HOH HOH A . F 6 HOH 112 712 205 HOH HOH A . F 6 HOH 113 713 135 HOH HOH A . F 6 HOH 114 714 38 HOH HOH A . F 6 HOH 115 715 49 HOH HOH A . F 6 HOH 116 716 177 HOH HOH A . F 6 HOH 117 717 137 HOH HOH A . F 6 HOH 118 718 33 HOH HOH A . F 6 HOH 119 719 47 HOH HOH A . F 6 HOH 120 720 206 HOH HOH A . F 6 HOH 121 721 130 HOH HOH A . F 6 HOH 122 722 45 HOH HOH A . F 6 HOH 123 723 174 HOH HOH A . F 6 HOH 124 724 166 HOH HOH A . F 6 HOH 125 725 118 HOH HOH A . F 6 HOH 126 726 124 HOH HOH A . F 6 HOH 127 727 97 HOH HOH A . F 6 HOH 128 728 46 HOH HOH A . F 6 HOH 129 729 170 HOH HOH A . F 6 HOH 130 730 53 HOH HOH A . F 6 HOH 131 731 191 HOH HOH A . F 6 HOH 132 732 102 HOH HOH A . F 6 HOH 133 733 197 HOH HOH A . F 6 HOH 134 734 203 HOH HOH A . F 6 HOH 135 735 35 HOH HOH A . F 6 HOH 136 736 138 HOH HOH A . F 6 HOH 137 737 250 HOH HOH A . F 6 HOH 138 738 119 HOH HOH A . F 6 HOH 139 739 329 HOH HOH A . F 6 HOH 140 740 110 HOH HOH A . F 6 HOH 141 741 24 HOH HOH A . F 6 HOH 142 742 77 HOH HOH A . F 6 HOH 143 743 117 HOH HOH A . F 6 HOH 144 744 8 HOH HOH A . F 6 HOH 145 745 188 HOH HOH A . F 6 HOH 146 746 3 HOH HOH A . F 6 HOH 147 747 159 HOH HOH A . F 6 HOH 148 748 195 HOH HOH A . F 6 HOH 149 749 222 HOH HOH A . F 6 HOH 150 750 227 HOH HOH A . F 6 HOH 151 751 43 HOH HOH A . F 6 HOH 152 752 189 HOH HOH A . F 6 HOH 153 753 82 HOH HOH A . F 6 HOH 154 754 204 HOH HOH A . F 6 HOH 155 755 168 HOH HOH A . F 6 HOH 156 756 58 HOH HOH A . F 6 HOH 157 757 142 HOH HOH A . F 6 HOH 158 758 68 HOH HOH A . F 6 HOH 159 759 164 HOH HOH A . F 6 HOH 160 760 230 HOH HOH A . F 6 HOH 161 761 104 HOH HOH A . F 6 HOH 162 762 121 HOH HOH A . F 6 HOH 163 763 181 HOH HOH A . F 6 HOH 164 764 178 HOH HOH A . F 6 HOH 165 765 173 HOH HOH A . F 6 HOH 166 766 256 HOH HOH A . F 6 HOH 167 767 40 HOH HOH A . F 6 HOH 168 768 274 HOH HOH A . F 6 HOH 169 769 254 HOH HOH A . F 6 HOH 170 770 64 HOH HOH A . F 6 HOH 171 771 351 HOH HOH A . F 6 HOH 172 772 42 HOH HOH A . F 6 HOH 173 773 209 HOH HOH A . F 6 HOH 174 774 194 HOH HOH A . F 6 HOH 175 775 21 HOH HOH A . F 6 HOH 176 776 321 HOH HOH A . F 6 HOH 177 777 139 HOH HOH A . F 6 HOH 178 778 223 HOH HOH A . F 6 HOH 179 779 74 HOH HOH A . F 6 HOH 180 780 312 HOH HOH A . F 6 HOH 181 781 285 HOH HOH A . F 6 HOH 182 782 113 HOH HOH A . F 6 HOH 183 783 150 HOH HOH A . F 6 HOH 184 784 266 HOH HOH A . F 6 HOH 185 785 161 HOH HOH A . F 6 HOH 186 786 301 HOH HOH A . F 6 HOH 187 787 246 HOH HOH A . F 6 HOH 188 788 28 HOH HOH A . F 6 HOH 189 789 237 HOH HOH A . F 6 HOH 190 790 148 HOH HOH A . F 6 HOH 191 791 268 HOH HOH A . F 6 HOH 192 792 327 HOH HOH A . F 6 HOH 193 793 131 HOH HOH A . F 6 HOH 194 794 96 HOH HOH A . F 6 HOH 195 795 235 HOH HOH A . F 6 HOH 196 796 311 HOH HOH A . F 6 HOH 197 797 182 HOH HOH A . F 6 HOH 198 798 201 HOH HOH A . F 6 HOH 199 799 212 HOH HOH A . F 6 HOH 200 800 340 HOH HOH A . F 6 HOH 201 801 265 HOH HOH A . F 6 HOH 202 802 163 HOH HOH A . F 6 HOH 203 803 111 HOH HOH A . F 6 HOH 204 804 202 HOH HOH A . F 6 HOH 205 805 93 HOH HOH A . F 6 HOH 206 806 290 HOH HOH A . F 6 HOH 207 807 59 HOH HOH A . F 6 HOH 208 808 147 HOH HOH A . F 6 HOH 209 809 141 HOH HOH A . F 6 HOH 210 810 260 HOH HOH A . F 6 HOH 211 811 218 HOH HOH A . F 6 HOH 212 812 343 HOH HOH A . F 6 HOH 213 813 179 HOH HOH A . F 6 HOH 214 814 92 HOH HOH A . F 6 HOH 215 815 125 HOH HOH A . F 6 HOH 216 816 30 HOH HOH A . F 6 HOH 217 817 297 HOH HOH A . F 6 HOH 218 818 292 HOH HOH A . F 6 HOH 219 819 304 HOH HOH A . F 6 HOH 220 820 303 HOH HOH A . F 6 HOH 221 821 316 HOH HOH A . F 6 HOH 222 822 299 HOH HOH A . F 6 HOH 223 823 198 HOH HOH A . F 6 HOH 224 824 308 HOH HOH A . F 6 HOH 225 825 263 HOH HOH A . F 6 HOH 226 826 300 HOH HOH A . F 6 HOH 227 827 307 HOH HOH A . F 6 HOH 228 828 314 HOH HOH A . F 6 HOH 229 829 126 HOH HOH A . F 6 HOH 230 830 225 HOH HOH A . F 6 HOH 231 831 210 HOH HOH A . F 6 HOH 232 832 315 HOH HOH A . F 6 HOH 233 833 155 HOH HOH A . F 6 HOH 234 834 331 HOH HOH A . F 6 HOH 235 835 323 HOH HOH A . F 6 HOH 236 836 81 HOH HOH A . F 6 HOH 237 837 267 HOH HOH A . F 6 HOH 238 838 56 HOH HOH A . F 6 HOH 239 839 219 HOH HOH A . F 6 HOH 240 840 309 HOH HOH A . F 6 HOH 241 841 296 HOH HOH A . F 6 HOH 242 842 248 HOH HOH A . F 6 HOH 243 843 288 HOH HOH A . F 6 HOH 244 844 239 HOH HOH A . F 6 HOH 245 845 172 HOH HOH A . F 6 HOH 246 846 345 HOH HOH A . F 6 HOH 247 847 338 HOH HOH A . F 6 HOH 248 848 247 HOH HOH A . F 6 HOH 249 849 349 HOH HOH A . F 6 HOH 250 850 226 HOH HOH A . F 6 HOH 251 851 236 HOH HOH A . F 6 HOH 252 852 199 HOH HOH A . F 6 HOH 253 853 187 HOH HOH A . F 6 HOH 254 854 156 HOH HOH A . F 6 HOH 255 855 287 HOH HOH A . F 6 HOH 256 856 144 HOH HOH A . F 6 HOH 257 857 272 HOH HOH A . F 6 HOH 258 858 152 HOH HOH A . F 6 HOH 259 859 347 HOH HOH A . F 6 HOH 260 860 276 HOH HOH A . F 6 HOH 261 861 281 HOH HOH A . F 6 HOH 262 862 344 HOH HOH A . F 6 HOH 263 863 105 HOH HOH A . F 6 HOH 264 864 313 HOH HOH A . F 6 HOH 265 865 109 HOH HOH A . F 6 HOH 266 866 127 HOH HOH A . F 6 HOH 267 867 295 HOH HOH A . F 6 HOH 268 868 294 HOH HOH A . F 6 HOH 269 869 352 HOH HOH A . F 6 HOH 270 870 291 HOH HOH A . F 6 HOH 271 871 273 HOH HOH A . F 6 HOH 272 872 271 HOH HOH A . F 6 HOH 273 873 71 HOH HOH A . F 6 HOH 274 874 154 HOH HOH A . F 6 HOH 275 875 103 HOH HOH A . F 6 HOH 276 876 220 HOH HOH A . F 6 HOH 277 877 50 HOH HOH A . F 6 HOH 278 878 342 HOH HOH A . F 6 HOH 279 879 298 HOH HOH A . F 6 HOH 280 880 293 HOH HOH A . F 6 HOH 281 881 241 HOH HOH A . F 6 HOH 282 882 322 HOH HOH A . F 6 HOH 283 883 310 HOH HOH A . F 6 HOH 284 884 140 HOH HOH A . F 6 HOH 285 885 132 HOH HOH A . F 6 HOH 286 886 320 HOH HOH A . F 6 HOH 287 887 306 HOH HOH A . F 6 HOH 288 888 90 HOH HOH A . F 6 HOH 289 889 165 HOH HOH A . F 6 HOH 290 890 245 HOH HOH A . F 6 HOH 291 891 252 HOH HOH A . F 6 HOH 292 892 289 HOH HOH A . F 6 HOH 293 893 158 HOH HOH A . F 6 HOH 294 894 234 HOH HOH A . F 6 HOH 295 895 319 HOH HOH A . F 6 HOH 296 896 123 HOH HOH A . F 6 HOH 297 897 133 HOH HOH A . F 6 HOH 298 898 186 HOH HOH A . F 6 HOH 299 899 162 HOH HOH A . F 6 HOH 300 900 328 HOH HOH A . F 6 HOH 301 901 37 HOH HOH A . F 6 HOH 302 902 283 HOH HOH A . F 6 HOH 303 903 73 HOH HOH A . F 6 HOH 304 904 305 HOH HOH A . F 6 HOH 305 905 243 HOH HOH A . F 6 HOH 306 906 143 HOH HOH A . F 6 HOH 307 907 302 HOH HOH A . F 6 HOH 308 908 339 HOH HOH A . F 6 HOH 309 909 317 HOH HOH A . F 6 HOH 310 910 353 HOH HOH A . F 6 HOH 311 911 335 HOH HOH A . F 6 HOH 312 912 211 HOH HOH A . F 6 HOH 313 913 278 HOH HOH A . F 6 HOH 314 914 251 HOH HOH A . F 6 HOH 315 915 224 HOH HOH A . F 6 HOH 316 916 207 HOH HOH A . F 6 HOH 317 917 318 HOH HOH A . F 6 HOH 318 918 257 HOH HOH A . F 6 HOH 319 919 280 HOH HOH A . F 6 HOH 320 920 277 HOH HOH A . F 6 HOH 321 921 284 HOH HOH A . F 6 HOH 322 922 330 HOH HOH A . F 6 HOH 323 923 333 HOH HOH A . F 6 HOH 324 924 346 HOH HOH A . F 6 HOH 325 925 200 HOH HOH A . F 6 HOH 326 926 282 HOH HOH A . F 6 HOH 327 927 324 HOH HOH A . F 6 HOH 328 928 334 HOH HOH A . F 6 HOH 329 929 325 HOH HOH A . F 6 HOH 330 930 167 HOH HOH A . F 6 HOH 331 931 332 HOH HOH A . F 6 HOH 332 932 279 HOH HOH A . F 6 HOH 333 933 326 HOH HOH A . G 6 HOH 1 101 258 HOH HOH B . G 6 HOH 2 102 217 HOH HOH B . G 6 HOH 3 103 270 HOH HOH B . G 6 HOH 4 104 176 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 58 ? CD1 ? A LEU 5 CD1 2 1 Y 1 A LEU 58 ? CD2 ? A LEU 5 CD2 3 1 Y 1 A VAL 59 ? CG1 ? A VAL 6 CG1 4 1 Y 1 A VAL 59 ? CG2 ? A VAL 6 CG2 5 1 Y 1 A LYS 61 ? CD ? A LYS 8 CD 6 1 Y 1 A LYS 61 ? CE ? A LYS 8 CE 7 1 Y 1 A LYS 61 ? NZ ? A LYS 8 NZ 8 1 Y 1 A ARG 104 ? CD ? A ARG 51 CD 9 1 Y 1 A ARG 104 ? NE ? A ARG 51 NE 10 1 Y 1 A ARG 104 ? CZ ? A ARG 51 CZ 11 1 Y 1 A ARG 104 ? NH1 ? A ARG 51 NH1 12 1 Y 1 A ARG 104 ? NH2 ? A ARG 51 NH2 13 1 Y 1 A GLN 117 ? CD ? A GLN 64 CD 14 1 Y 1 A GLN 117 ? OE1 ? A GLN 64 OE1 15 1 Y 1 A GLN 117 ? NE2 ? A GLN 64 NE2 16 1 Y 1 A LEU 133 ? CG ? A LEU 80 CG 17 1 Y 1 A LEU 133 ? CD1 ? A LEU 80 CD1 18 1 Y 1 A LEU 133 ? CD2 ? A LEU 80 CD2 19 1 Y 1 A LYS 217 ? CD ? A LYS 164 CD 20 1 Y 1 A LYS 217 ? CE ? A LYS 164 CE 21 1 Y 1 A LYS 217 ? NZ ? A LYS 164 NZ 22 1 Y 1 A LYS 407 ? CE ? A LYS 354 CE 23 1 Y 1 A LYS 407 ? NZ ? A LYS 354 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.18.2_3874: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8PXY _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.608 _cell.length_a_esd ? _cell.length_b 94.623 _cell.length_b_esd ? _cell.length_c 58.794 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8PXY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8PXY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.80 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES pH 7.0, 25% Jeffamine ED-2001 pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 XE 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-05-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97625 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97625 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 30.140 _reflns.entry_id 8PXY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 59.54 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23935 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.2 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.144 _reflns.pdbx_Rpim_I_all 0.040 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.993 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.138 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.19 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1136 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 13.5 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.027 _reflns_shell.pdbx_Rpim_I_all 0.279 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.844 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 97.0 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.987 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8PXY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.15 _refine.ls_d_res_low 59.54 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 23830 _refine.ls_number_reflns_R_free 1161 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.57 _refine.ls_percent_reflns_R_free 4.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2028 _refine.ls_R_factor_R_free 0.2463 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2006 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.51 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.30 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 59.54 _refine_hist.number_atoms_solvent 337 _refine_hist.number_atoms_total 3037 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2619 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 81 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2807 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.574 ? 3857 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 11.257 ? 960 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.048 ? 436 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 506 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.15 2.25 . . 148 2737 98.00 . . . . 0.2713 . . . . . . . . . . . 0.2912 'X-RAY DIFFRACTION' 2.25 2.37 . . 130 2786 100.00 . . . . 0.2707 . . . . . . . . . . . 0.3535 'X-RAY DIFFRACTION' 2.37 2.51 . . 143 2764 99.00 . . . . 0.2604 . . . . . . . . . . . 0.2738 'X-RAY DIFFRACTION' 2.51 2.71 . . 146 2835 100.00 . . . . 0.2528 . . . . . . . . . . . 0.3166 'X-RAY DIFFRACTION' 2.71 2.98 . . 147 2804 100.00 . . . . 0.2315 . . . . . . . . . . . 0.2842 'X-RAY DIFFRACTION' 2.98 3.41 . . 148 2841 100.00 . . . . 0.2039 . . . . . . . . . . . 0.2470 'X-RAY DIFFRACTION' 3.41 4.30 . . 136 2896 100.00 . . . . 0.1663 . . . . . . . . . . . 0.2375 'X-RAY DIFFRACTION' 4.30 59.54 . . 163 3006 100.00 . . . . 0.1662 . . . . . . . . . . . 0.1902 # _struct.entry_id 8PXY _struct.title 'Crystal structure of the transpeptidase LdtMt2 C354S mutant from Mycobacterium tuberculosis in complex with natural substrate' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8PXY _struct_keywords.text 'LdtMt2, Substrate complex, Mycobacterium tuberculosis, L, D-transpeptidase, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP LDT2_MYCTO O53223 ? 1 ;DLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGG AATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHF WKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVG SRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIV EVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA ; 56 2 PDB 8PXY 8PXY ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8PXY A 3 ? 355 ? O53223 56 ? 408 ? 56 408 2 2 8PXY B 1 ? 4 ? 8PXY 1 ? 4 ? 1 4 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8PXY GLN A 1 ? UNP O53223 ? ? 'expression tag' 54 1 1 8PXY SER A 2 ? UNP O53223 ? ? 'expression tag' 55 2 1 8PXY SER A 301 ? UNP O53223 CYS 354 'engineered mutation' 354 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1210 ? 1 MORE 3 ? 1 'SSA (A^2)' 16920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 127 ? ALA A 134 ? ASP A 180 ALA A 187 1 ? 8 HELX_P HELX_P2 AA2 SER A 253 ? GLY A 256 ? SER A 306 GLY A 309 5 ? 4 HELX_P HELX_P3 AA3 PRO A 286 ? VAL A 289 ? PRO A 339 VAL A 342 5 ? 4 HELX_P HELX_P4 AA4 SER A 305 ? VAL A 316 ? SER A 358 VAL A 369 1 ? 12 HELX_P HELX_P5 AA5 GLY A 339 ? ILE A 343 ? GLY A 392 ILE A 396 5 ? 5 HELX_P HELX_P6 AA6 PRO A 344 ? GLY A 351 ? PRO A 397 GLY A 404 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ALA 1 C ? ? ? 1_555 B ZGL 2 N ? ? B ALA 1 B ZGL 2 1_555 ? ? ? ? ? ? ? 1.488 ? ? covale2 covale one ? B ALA 1 N ? ? ? 1_555 C MUB . C10 ? ? B ALA 1 C MUB 1 1_555 ? ? ? ? ? ? ? 1.486 ? ? covale3 covale both ? B ZGL 2 C ? ? ? 1_555 B JGO 3 N ? ? B ZGL 2 B JGO 3 1_555 ? ? ? ? ? ? ? 1.477 ? ? covale4 covale both ? B JGO 3 C ? ? ? 1_555 B DAL 4 N ? ? B JGO 3 B DAL 4 1_555 ? ? ? ? ? ? ? 1.471 ? ? covale5 covale both ? C MUB . O4 ? ? ? 1_555 C NAG . C1 ? ? C MUB 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.401 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 JGO B 3 ? . . . . JGO B 3 ? 1_555 . . . . . . . LYS 1 JGO Carbamoylation 'Named protein modification' 2 ZGL B 2 ? . . . . ZGL B 2 ? 1_555 . . . . . . . ? 1 ZGL None 'Non-standard residue' 3 MUB C . ? ALA B 1 ? MUB C 1 ? 1_555 ALA B 1 ? 1_555 C10 N ALA 1 MUB None Carbohydrate # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 MET 104 A . ? MET 157 A PRO 105 A ? PRO 158 A 1 1.39 2 ASN 140 A . ? ASN 193 A PRO 141 A ? PRO 194 A 1 -2.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 5 ? AA7 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? parallel AA6 4 5 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 8 ? ALA A 11 ? LYS A 61 ALA A 64 AA1 2 SER A 27 ? ALA A 31 ? SER A 80 ALA A 84 AA1 3 ARG A 58 ? THR A 61 ? ARG A 111 THR A 114 AA1 4 GLY A 50 ? LEU A 52 ? GLY A 103 LEU A 105 AA2 1 VAL A 34 ? ASN A 42 ? VAL A 87 ASN A 95 AA2 2 ARG A 70 ? GLY A 79 ? ARG A 123 GLY A 132 AA2 3 GLY A 82 ? GLN A 91 ? GLY A 135 GLN A 144 AA3 1 HIS A 97 ? THR A 99 ? HIS A 150 THR A 152 AA3 2 MET A 184 ? GLY A 186 ? MET A 237 GLY A 239 AA4 1 PRO A 101 ? MET A 104 ? PRO A 154 MET A 157 AA4 2 VAL A 117 ? PHE A 121 ? VAL A 170 PHE A 174 AA4 3 GLU A 154 ? ARG A 158 ? GLU A 207 ARG A 211 AA4 4 ALA A 146 ? TRP A 149 ? ALA A 199 TRP A 202 AA5 1 VAL A 110 ? VAL A 111 ? VAL A 163 VAL A 164 AA5 2 VAL A 190 ? ILE A 196 ? VAL A 243 ILE A 249 AA5 3 ALA A 168 ? VAL A 173 ? ALA A 221 VAL A 226 AA5 4 ILE A 135 ? ASN A 140 ? ILE A 188 ASN A 193 AA6 1 GLU A 218 ? PRO A 224 ? GLU A 271 PRO A 277 AA6 2 ILE A 210 ? VAL A 215 ? ILE A 263 VAL A 268 AA6 3 VAL A 200 ? ASP A 205 ? VAL A 253 ASP A 258 AA6 4 ILE A 321 ? VAL A 325 ? ILE A 374 VAL A 378 AA6 5 GLY A 237 ? ILE A 240 ? GLY A 290 ILE A 293 AA7 1 ARG A 244 ? ASP A 251 ? ARG A 297 ASP A 304 AA7 2 ARG A 266 ? GLN A 274 ? ARG A 319 GLN A 327 AA7 3 PHE A 281 ? SER A 284 ? PHE A 334 SER A 337 AA7 4 LEU A 302 ? VAL A 304 ? LEU A 355 VAL A 357 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 10 ? N THR A 63 O THR A 29 ? O THR A 82 AA1 2 3 N VAL A 28 ? N VAL A 81 O TRP A 59 ? O TRP A 112 AA1 3 4 O SER A 60 ? O SER A 113 N ARG A 51 ? N ARG A 104 AA2 1 2 N THR A 39 ? N THR A 92 O ASN A 74 ? O ASN A 127 AA2 2 3 N LEU A 73 ? N LEU A 126 O LEU A 88 ? O LEU A 141 AA3 1 2 N HIS A 97 ? N HIS A 150 O PHE A 185 ? O PHE A 238 AA4 1 2 N TYR A 102 ? N TYR A 155 O ARG A 120 ? O ARG A 173 AA4 2 3 N VAL A 117 ? N VAL A 170 O TRP A 157 ? O TRP A 210 AA4 3 4 O ARG A 156 ? O ARG A 209 N TYR A 148 ? N TYR A 201 AA5 1 2 N VAL A 111 ? N VAL A 164 O THR A 195 ? O THR A 248 AA5 2 3 O VAL A 190 ? O VAL A 243 N VAL A 173 ? N VAL A 226 AA5 3 4 O ALA A 168 ? O ALA A 221 N ASN A 140 ? N ASN A 193 AA6 1 2 O MET A 223 ? O MET A 276 N LEU A 211 ? N LEU A 264 AA6 2 3 O THR A 212 ? O THR A 265 N THR A 203 ? N THR A 256 AA6 3 4 N ALA A 204 ? N ALA A 257 O GLU A 323 ? O GLU A 376 AA6 4 5 O VAL A 322 ? O VAL A 375 N TYR A 239 ? N TYR A 292 AA7 1 2 N MET A 250 ? N MET A 303 O THR A 267 ? O THR A 320 AA7 2 3 N THR A 273 ? N THR A 326 O VAL A 282 ? O VAL A 335 AA7 3 4 N PHE A 281 ? N PHE A 334 O LEU A 302 ? O LEU A 355 # _pdbx_entry_details.entry_id 8PXY _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details GlcNAc-MurNAc-L-ALA-D-iGluNH2-m-DAPNH2-D-ALA _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C B ALA 1 ? ? N B ZGL 2 ? ? 1.488 1.336 0.152 0.023 Y 2 1 C B ZGL 2 ? ? N B JGO 3 ? ? 1.477 1.336 0.141 0.023 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 204 ? ? -160.41 -166.37 2 1 HIS A 347 ? ? -143.35 -53.11 3 1 ASN A 405 ? ? -146.71 40.97 4 1 ZGL B 2 ? ? -138.32 -31.37 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ZGL _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 2 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 11.29 # _pdbx_molecule_features.prd_id PRD_002583 _pdbx_molecule_features.name 'Peptidoglycan disaccharide tetrapeptide' _pdbx_molecule_features.type Glycopeptide _pdbx_molecule_features.class Inducer _pdbx_molecule_features.details ;Peptidoglycan is composed of glycan strands and peptide stems. The glycan strands are made of N-acetylmuramic acid/MurNAc (MUB) and N-acetylglucosamine/GlcNAc (NAG) linked by beta-1,4 glycosidic bonds. Peptide stems, which are less conserved, attach to MurNAc and consist of L-alanine, gamma D-glutamine/D-Gln (ZGL), meso-diaminopimelic acid/m-DAP (JGO), and D-alanine (DAP). ; # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_002583 B 1 PRD_002583 C # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 933 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 53.8177 7.0887 12.1721 0.2689 ? 0.0163 ? 0.0445 ? 0.2882 ? -0.0070 ? 0.3068 ? 1.6711 ? -0.2426 ? 2.2350 ? 6.3179 ? 0.5206 ? 3.4060 ? 0.0779 ? -0.0210 ? 0.0332 ? -0.1614 ? -0.0267 ? -0.0416 ? 0.3085 ? -0.1702 ? -0.0542 ? 2 'X-RAY DIFFRACTION' ? refined 33.3916 17.5795 10.9384 0.3131 ? 0.0100 ? 0.0523 ? 0.2927 ? 0.0108 ? 0.2369 ? 2.7525 ? -0.1688 ? 0.5365 ? 0.8555 ? -0.0533 ? 0.4832 ? 0.0136 ? -0.1240 ? -0.0103 ? -0.1092 ? -0.0123 ? -0.0746 ? 0.0171 ? 0.0617 ? 0.0052 ? 3 'X-RAY DIFFRACTION' ? refined 2.5993 26.7025 13.7201 0.3300 ? 0.0343 ? -0.0751 ? 0.2855 ? -0.0001 ? 0.2951 ? 1.4502 ? -0.0705 ? -0.2983 ? 0.7622 ? 0.1459 ? 1.6523 ? 0.0724 ? -0.0558 ? 0.0355 ? -0.1579 ? -0.0824 ? 0.1332 ? -0.2043 ? -0.2333 ? 0.0134 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 58 through 122 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 123 through 248 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 249 through 407 ) ; # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 931 ? 6.14 . 2 1 O ? A HOH 932 ? 6.27 . 3 1 O ? A HOH 933 ? 6.76 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 54 ? A GLN 1 2 1 Y 1 A SER 55 ? A SER 2 3 1 Y 1 A ASP 56 ? A ASP 3 4 1 Y 1 A LEU 57 ? A LEU 4 5 1 Y 1 A ALA 408 ? A ALA 355 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DAL N N N N 89 DAL CA C N R 90 DAL CB C N N 91 DAL C C N N 92 DAL O O N N 93 DAL OXT O N N 94 DAL H H N N 95 DAL H2 H N N 96 DAL HA H N N 97 DAL HB1 H N N 98 DAL HB2 H N N 99 DAL HB3 H N N 100 DAL HXT H N N 101 EPE N1 N N N 102 EPE C2 C N N 103 EPE C3 C N N 104 EPE N4 N N N 105 EPE C5 C N N 106 EPE C6 C N N 107 EPE C7 C N N 108 EPE C8 C N N 109 EPE O8 O N N 110 EPE C9 C N N 111 EPE C10 C N N 112 EPE S S N N 113 EPE O1S O N N 114 EPE O2S O N N 115 EPE O3S O N N 116 EPE H21 H N N 117 EPE H22 H N N 118 EPE H31 H N N 119 EPE H32 H N N 120 EPE H51 H N N 121 EPE H52 H N N 122 EPE H61 H N N 123 EPE H62 H N N 124 EPE H71 H N N 125 EPE H72 H N N 126 EPE H81 H N N 127 EPE H82 H N N 128 EPE HO8 H N N 129 EPE H91 H N N 130 EPE H92 H N N 131 EPE H101 H N N 132 EPE H102 H N N 133 EPE HOS3 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 JGO C C N N 230 JGO CA C N S 231 JGO CB C N N 232 JGO CG C N N 233 JGO CD C N N 234 JGO CE C N R 235 JGO CZ C N N 236 JGO O O N N 237 JGO OH2 O N N 238 JGO N N N N 239 JGO NZ N N N 240 JGO NH1 N N N 241 JGO HA H N N 242 JGO HB2 H N N 243 JGO HB3 H N N 244 JGO HG2 H N N 245 JGO HG3 H N N 246 JGO HD2 H N N 247 JGO HD3 H N N 248 JGO HE2 H N N 249 JGO H H N N 250 JGO H2 H N N 251 JGO HZ1 H N N 252 JGO HZ2 H N N 253 JGO HH1 H N N 254 JGO HN1 H N N 255 JGO OXT O N N 256 JGO HXT H N N 257 LEU N N N N 258 LEU CA C N S 259 LEU C C N N 260 LEU O O N N 261 LEU CB C N N 262 LEU CG C N N 263 LEU CD1 C N N 264 LEU CD2 C N N 265 LEU OXT O N N 266 LEU H H N N 267 LEU H2 H N N 268 LEU HA H N N 269 LEU HB2 H N N 270 LEU HB3 H N N 271 LEU HG H N N 272 LEU HD11 H N N 273 LEU HD12 H N N 274 LEU HD13 H N N 275 LEU HD21 H N N 276 LEU HD22 H N N 277 LEU HD23 H N N 278 LEU HXT H N N 279 LYS N N N N 280 LYS CA C N S 281 LYS C C N N 282 LYS O O N N 283 LYS CB C N N 284 LYS CG C N N 285 LYS CD C N N 286 LYS CE C N N 287 LYS NZ N N N 288 LYS OXT O N N 289 LYS H H N N 290 LYS H2 H N N 291 LYS HA H N N 292 LYS HB2 H N N 293 LYS HB3 H N N 294 LYS HG2 H N N 295 LYS HG3 H N N 296 LYS HD2 H N N 297 LYS HD3 H N N 298 LYS HE2 H N N 299 LYS HE3 H N N 300 LYS HZ1 H N N 301 LYS HZ2 H N N 302 LYS HZ3 H N N 303 LYS HXT H N N 304 MET N N N N 305 MET CA C N S 306 MET C C N N 307 MET O O N N 308 MET CB C N N 309 MET CG C N N 310 MET SD S N N 311 MET CE C N N 312 MET OXT O N N 313 MET H H N N 314 MET H2 H N N 315 MET HA H N N 316 MET HB2 H N N 317 MET HB3 H N N 318 MET HG2 H N N 319 MET HG3 H N N 320 MET HE1 H N N 321 MET HE2 H N N 322 MET HE3 H N N 323 MET HXT H N N 324 MUB C1 C N S 325 MUB C2 C N R 326 MUB C3 C N R 327 MUB C4 C N S 328 MUB C5 C N R 329 MUB C6 C N N 330 MUB C7 C N N 331 MUB C8 C N N 332 MUB C9 C N R 333 MUB C10 C N N 334 MUB C11 C N N 335 MUB O1 O N N 336 MUB O3 O N N 337 MUB O4 O N N 338 MUB O5 O N N 339 MUB O6 O N N 340 MUB O7 O N N 341 MUB O11 O N N 342 MUB O10 O N N 343 MUB N2 N N N 344 MUB H1 H N N 345 MUB H2 H N N 346 MUB HN2 H N N 347 MUB H81 H N N 348 MUB H82 H N N 349 MUB H83 H N N 350 MUB H3 H N N 351 MUB H9 H N N 352 MUB H111 H N N 353 MUB H112 H N N 354 MUB H113 H N N 355 MUB H4 H N N 356 MUB H5 H N N 357 MUB H61 H N N 358 MUB H62 H N N 359 MUB HO6 H N N 360 MUB HO4 H N N 361 MUB HO11 H N N 362 MUB HO1 H N N 363 NAG C1 C N R 364 NAG C2 C N R 365 NAG C3 C N R 366 NAG C4 C N S 367 NAG C5 C N R 368 NAG C6 C N N 369 NAG C7 C N N 370 NAG C8 C N N 371 NAG N2 N N N 372 NAG O1 O N N 373 NAG O3 O N N 374 NAG O4 O N N 375 NAG O5 O N N 376 NAG O6 O N N 377 NAG O7 O N N 378 NAG H1 H N N 379 NAG H2 H N N 380 NAG H3 H N N 381 NAG H4 H N N 382 NAG H5 H N N 383 NAG H61 H N N 384 NAG H62 H N N 385 NAG H81 H N N 386 NAG H82 H N N 387 NAG H83 H N N 388 NAG HN2 H N N 389 NAG HO1 H N N 390 NAG HO3 H N N 391 NAG HO4 H N N 392 NAG HO6 H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 ZGL CD C N N 535 ZGL N N N N 536 ZGL O2 O N N 537 ZGL N1 N N N 538 ZGL CA C N R 539 ZGL CB C N N 540 ZGL C C N N 541 ZGL CG C N N 542 ZGL OXT O N N 543 ZGL O O N N 544 ZGL H H N N 545 ZGL H2 H N N 546 ZGL HN1 H N N 547 ZGL HN1A H N N 548 ZGL HA H N N 549 ZGL HB H N N 550 ZGL HBA H N N 551 ZGL HG H N N 552 ZGL HGA H N N 553 ZGL HXT H N N 554 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DAL N CA sing N N 83 DAL N H sing N N 84 DAL N H2 sing N N 85 DAL CA CB sing N N 86 DAL CA C sing N N 87 DAL CA HA sing N N 88 DAL CB HB1 sing N N 89 DAL CB HB2 sing N N 90 DAL CB HB3 sing N N 91 DAL C O doub N N 92 DAL C OXT sing N N 93 DAL OXT HXT sing N N 94 EPE N1 C2 sing N N 95 EPE N1 C6 sing N N 96 EPE N1 C9 sing N N 97 EPE C2 C3 sing N N 98 EPE C2 H21 sing N N 99 EPE C2 H22 sing N N 100 EPE C3 N4 sing N N 101 EPE C3 H31 sing N N 102 EPE C3 H32 sing N N 103 EPE N4 C5 sing N N 104 EPE N4 C7 sing N N 105 EPE C5 C6 sing N N 106 EPE C5 H51 sing N N 107 EPE C5 H52 sing N N 108 EPE C6 H61 sing N N 109 EPE C6 H62 sing N N 110 EPE C7 C8 sing N N 111 EPE C7 H71 sing N N 112 EPE C7 H72 sing N N 113 EPE C8 O8 sing N N 114 EPE C8 H81 sing N N 115 EPE C8 H82 sing N N 116 EPE O8 HO8 sing N N 117 EPE C9 C10 sing N N 118 EPE C9 H91 sing N N 119 EPE C9 H92 sing N N 120 EPE C10 S sing N N 121 EPE C10 H101 sing N N 122 EPE C10 H102 sing N N 123 EPE S O1S doub N N 124 EPE S O2S doub N N 125 EPE S O3S sing N N 126 EPE O3S HOS3 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 JGO OH2 CZ doub N N 218 JGO CZ CE sing N N 219 JGO CZ NH1 sing N N 220 JGO CE NZ sing N N 221 JGO CE CD sing N N 222 JGO CG CD sing N N 223 JGO CG CB sing N N 224 JGO CA C sing N N 225 JGO CA CB sing N N 226 JGO CA N sing N N 227 JGO C O doub N N 228 JGO CA HA sing N N 229 JGO CB HB2 sing N N 230 JGO CB HB3 sing N N 231 JGO CG HG2 sing N N 232 JGO CG HG3 sing N N 233 JGO CD HD2 sing N N 234 JGO CD HD3 sing N N 235 JGO CE HE2 sing N N 236 JGO N H sing N N 237 JGO N H2 sing N N 238 JGO NZ HZ1 sing N N 239 JGO NZ HZ2 sing N N 240 JGO NH1 HH1 sing N N 241 JGO NH1 HN1 sing N N 242 JGO C OXT sing N N 243 JGO OXT HXT sing N N 244 LEU N CA sing N N 245 LEU N H sing N N 246 LEU N H2 sing N N 247 LEU CA C sing N N 248 LEU CA CB sing N N 249 LEU CA HA sing N N 250 LEU C O doub N N 251 LEU C OXT sing N N 252 LEU CB CG sing N N 253 LEU CB HB2 sing N N 254 LEU CB HB3 sing N N 255 LEU CG CD1 sing N N 256 LEU CG CD2 sing N N 257 LEU CG HG sing N N 258 LEU CD1 HD11 sing N N 259 LEU CD1 HD12 sing N N 260 LEU CD1 HD13 sing N N 261 LEU CD2 HD21 sing N N 262 LEU CD2 HD22 sing N N 263 LEU CD2 HD23 sing N N 264 LEU OXT HXT sing N N 265 LYS N CA sing N N 266 LYS N H sing N N 267 LYS N H2 sing N N 268 LYS CA C sing N N 269 LYS CA CB sing N N 270 LYS CA HA sing N N 271 LYS C O doub N N 272 LYS C OXT sing N N 273 LYS CB CG sing N N 274 LYS CB HB2 sing N N 275 LYS CB HB3 sing N N 276 LYS CG CD sing N N 277 LYS CG HG2 sing N N 278 LYS CG HG3 sing N N 279 LYS CD CE sing N N 280 LYS CD HD2 sing N N 281 LYS CD HD3 sing N N 282 LYS CE NZ sing N N 283 LYS CE HE2 sing N N 284 LYS CE HE3 sing N N 285 LYS NZ HZ1 sing N N 286 LYS NZ HZ2 sing N N 287 LYS NZ HZ3 sing N N 288 LYS OXT HXT sing N N 289 MET N CA sing N N 290 MET N H sing N N 291 MET N H2 sing N N 292 MET CA C sing N N 293 MET CA CB sing N N 294 MET CA HA sing N N 295 MET C O doub N N 296 MET C OXT sing N N 297 MET CB CG sing N N 298 MET CB HB2 sing N N 299 MET CB HB3 sing N N 300 MET CG SD sing N N 301 MET CG HG2 sing N N 302 MET CG HG3 sing N N 303 MET SD CE sing N N 304 MET CE HE1 sing N N 305 MET CE HE2 sing N N 306 MET CE HE3 sing N N 307 MET OXT HXT sing N N 308 MUB C1 C2 sing N N 309 MUB C2 C3 sing N N 310 MUB C3 C4 sing N N 311 MUB C4 C5 sing N N 312 MUB C5 C6 sing N N 313 MUB C7 C8 sing N N 314 MUB C9 C10 sing N N 315 MUB C9 C11 sing N N 316 MUB C1 O1 sing N N 317 MUB C3 O3 sing N N 318 MUB C9 O3 sing N N 319 MUB C4 O4 sing N N 320 MUB C1 O5 sing N N 321 MUB C5 O5 sing N N 322 MUB C6 O6 sing N N 323 MUB C7 O7 doub N N 324 MUB C10 O11 sing N N 325 MUB C10 O10 doub N N 326 MUB C2 N2 sing N N 327 MUB C7 N2 sing N N 328 MUB C1 H1 sing N N 329 MUB C2 H2 sing N N 330 MUB N2 HN2 sing N N 331 MUB C8 H81 sing N N 332 MUB C8 H82 sing N N 333 MUB C8 H83 sing N N 334 MUB C3 H3 sing N N 335 MUB C9 H9 sing N N 336 MUB C11 H111 sing N N 337 MUB C11 H112 sing N N 338 MUB C11 H113 sing N N 339 MUB C4 H4 sing N N 340 MUB C5 H5 sing N N 341 MUB C6 H61 sing N N 342 MUB C6 H62 sing N N 343 MUB O6 HO6 sing N N 344 MUB O4 HO4 sing N N 345 MUB O11 HO11 sing N N 346 MUB O1 HO1 sing N N 347 NAG C1 C2 sing N N 348 NAG C1 O1 sing N N 349 NAG C1 O5 sing N N 350 NAG C1 H1 sing N N 351 NAG C2 C3 sing N N 352 NAG C2 N2 sing N N 353 NAG C2 H2 sing N N 354 NAG C3 C4 sing N N 355 NAG C3 O3 sing N N 356 NAG C3 H3 sing N N 357 NAG C4 C5 sing N N 358 NAG C4 O4 sing N N 359 NAG C4 H4 sing N N 360 NAG C5 C6 sing N N 361 NAG C5 O5 sing N N 362 NAG C5 H5 sing N N 363 NAG C6 O6 sing N N 364 NAG C6 H61 sing N N 365 NAG C6 H62 sing N N 366 NAG C7 C8 sing N N 367 NAG C7 N2 sing N N 368 NAG C7 O7 doub N N 369 NAG C8 H81 sing N N 370 NAG C8 H82 sing N N 371 NAG C8 H83 sing N N 372 NAG N2 HN2 sing N N 373 NAG O1 HO1 sing N N 374 NAG O3 HO3 sing N N 375 NAG O4 HO4 sing N N 376 NAG O6 HO6 sing N N 377 PHE N CA sing N N 378 PHE N H sing N N 379 PHE N H2 sing N N 380 PHE CA C sing N N 381 PHE CA CB sing N N 382 PHE CA HA sing N N 383 PHE C O doub N N 384 PHE C OXT sing N N 385 PHE CB CG sing N N 386 PHE CB HB2 sing N N 387 PHE CB HB3 sing N N 388 PHE CG CD1 doub Y N 389 PHE CG CD2 sing Y N 390 PHE CD1 CE1 sing Y N 391 PHE CD1 HD1 sing N N 392 PHE CD2 CE2 doub Y N 393 PHE CD2 HD2 sing N N 394 PHE CE1 CZ doub Y N 395 PHE CE1 HE1 sing N N 396 PHE CE2 CZ sing Y N 397 PHE CE2 HE2 sing N N 398 PHE CZ HZ sing N N 399 PHE OXT HXT sing N N 400 PRO N CA sing N N 401 PRO N CD sing N N 402 PRO N H sing N N 403 PRO CA C sing N N 404 PRO CA CB sing N N 405 PRO CA HA sing N N 406 PRO C O doub N N 407 PRO C OXT sing N N 408 PRO CB CG sing N N 409 PRO CB HB2 sing N N 410 PRO CB HB3 sing N N 411 PRO CG CD sing N N 412 PRO CG HG2 sing N N 413 PRO CG HG3 sing N N 414 PRO CD HD2 sing N N 415 PRO CD HD3 sing N N 416 PRO OXT HXT sing N N 417 SER N CA sing N N 418 SER N H sing N N 419 SER N H2 sing N N 420 SER CA C sing N N 421 SER CA CB sing N N 422 SER CA HA sing N N 423 SER C O doub N N 424 SER C OXT sing N N 425 SER CB OG sing N N 426 SER CB HB2 sing N N 427 SER CB HB3 sing N N 428 SER OG HG sing N N 429 SER OXT HXT sing N N 430 THR N CA sing N N 431 THR N H sing N N 432 THR N H2 sing N N 433 THR CA C sing N N 434 THR CA CB sing N N 435 THR CA HA sing N N 436 THR C O doub N N 437 THR C OXT sing N N 438 THR CB OG1 sing N N 439 THR CB CG2 sing N N 440 THR CB HB sing N N 441 THR OG1 HG1 sing N N 442 THR CG2 HG21 sing N N 443 THR CG2 HG22 sing N N 444 THR CG2 HG23 sing N N 445 THR OXT HXT sing N N 446 TRP N CA sing N N 447 TRP N H sing N N 448 TRP N H2 sing N N 449 TRP CA C sing N N 450 TRP CA CB sing N N 451 TRP CA HA sing N N 452 TRP C O doub N N 453 TRP C OXT sing N N 454 TRP CB CG sing N N 455 TRP CB HB2 sing N N 456 TRP CB HB3 sing N N 457 TRP CG CD1 doub Y N 458 TRP CG CD2 sing Y N 459 TRP CD1 NE1 sing Y N 460 TRP CD1 HD1 sing N N 461 TRP CD2 CE2 doub Y N 462 TRP CD2 CE3 sing Y N 463 TRP NE1 CE2 sing Y N 464 TRP NE1 HE1 sing N N 465 TRP CE2 CZ2 sing Y N 466 TRP CE3 CZ3 doub Y N 467 TRP CE3 HE3 sing N N 468 TRP CZ2 CH2 doub Y N 469 TRP CZ2 HZ2 sing N N 470 TRP CZ3 CH2 sing Y N 471 TRP CZ3 HZ3 sing N N 472 TRP CH2 HH2 sing N N 473 TRP OXT HXT sing N N 474 TYR N CA sing N N 475 TYR N H sing N N 476 TYR N H2 sing N N 477 TYR CA C sing N N 478 TYR CA CB sing N N 479 TYR CA HA sing N N 480 TYR C O doub N N 481 TYR C OXT sing N N 482 TYR CB CG sing N N 483 TYR CB HB2 sing N N 484 TYR CB HB3 sing N N 485 TYR CG CD1 doub Y N 486 TYR CG CD2 sing Y N 487 TYR CD1 CE1 sing Y N 488 TYR CD1 HD1 sing N N 489 TYR CD2 CE2 doub Y N 490 TYR CD2 HD2 sing N N 491 TYR CE1 CZ doub Y N 492 TYR CE1 HE1 sing N N 493 TYR CE2 CZ sing Y N 494 TYR CE2 HE2 sing N N 495 TYR CZ OH sing N N 496 TYR OH HH sing N N 497 TYR OXT HXT sing N N 498 VAL N CA sing N N 499 VAL N H sing N N 500 VAL N H2 sing N N 501 VAL CA C sing N N 502 VAL CA CB sing N N 503 VAL CA HA sing N N 504 VAL C O doub N N 505 VAL C OXT sing N N 506 VAL CB CG1 sing N N 507 VAL CB CG2 sing N N 508 VAL CB HB sing N N 509 VAL CG1 HG11 sing N N 510 VAL CG1 HG12 sing N N 511 VAL CG1 HG13 sing N N 512 VAL CG2 HG21 sing N N 513 VAL CG2 HG22 sing N N 514 VAL CG2 HG23 sing N N 515 VAL OXT HXT sing N N 516 ZGL N1 CD sing N N 517 ZGL CD O2 doub N N 518 ZGL CD CA sing N N 519 ZGL N CA sing N N 520 ZGL N H sing N N 521 ZGL N H2 sing N N 522 ZGL N1 HN1 sing N N 523 ZGL N1 HN1A sing N N 524 ZGL CB CA sing N N 525 ZGL CA HA sing N N 526 ZGL CB CG sing N N 527 ZGL CB HB sing N N 528 ZGL CB HBA sing N N 529 ZGL CG C sing N N 530 ZGL O C doub N N 531 ZGL C OXT sing N N 532 ZGL CG HG sing N N 533 ZGL CG HGA sing N N 534 ZGL OXT HXT sing N N 535 # _pdbx_audit_support.funding_organization 'Biotechnology and Biological Sciences Research Council (BBSRC)' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 MUB 1 n 3 NAG 2 n # _atom_sites.entry_id 8PXY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013053 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010568 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017009 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL H N O S # loop_