HEADER LIPID BINDING PROTEIN 07-AUG-23 8Q4I TITLE THE CRYSTAL STRUCTURE OF HUMAN CHLORIDE INTRACELLULAR CHANNEL PROTEIN TITLE 2 5 DELTA 57-68 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHLORIDE INTRACELLULAR CHANNEL PROTEIN 5; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CLIC5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CLIC5B, P64, METAMORPHIC PROTEIN, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.MANORI,M.GILADI,Y.HAITIN REVDAT 1 20-MAR-24 8Q4I 0 JRNL AUTH B.MANORI,A.VAKNIN,P.VANKOVA,A.NITZAN,R.ZAIDEL-BAR,P.MAN, JRNL AUTH 2 M.GILADI,Y.HAITIN JRNL TITL CHLORIDE INTRACELLULAR CHANNEL (CLIC) PROTEINS FUNCTION AS JRNL TITL 2 FUSOGENS. JRNL REF NAT COMMUN V. 15 2085 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38453905 JRNL DOI 10.1038/S41467-024-46301-Z REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 38409 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 2002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.5600 - 5.0600 1.00 2788 154 0.2139 0.2215 REMARK 3 2 5.0600 - 4.0200 1.00 2666 150 0.1958 0.2070 REMARK 3 3 4.0200 - 3.5100 1.00 2629 145 0.2167 0.2164 REMARK 3 4 3.5100 - 3.1900 1.00 2621 145 0.2432 0.2924 REMARK 3 5 3.1900 - 2.9600 1.00 2606 142 0.2771 0.3419 REMARK 3 6 2.9600 - 2.7900 1.00 2590 142 0.2659 0.3186 REMARK 3 7 2.7900 - 2.6500 1.00 2578 145 0.2381 0.2804 REMARK 3 8 2.6500 - 2.5300 1.00 2602 142 0.2282 0.2618 REMARK 3 9 2.5300 - 2.4300 1.00 2576 137 0.2383 0.2425 REMARK 3 10 2.4300 - 2.3500 1.00 2558 140 0.2785 0.3023 REMARK 3 11 2.3500 - 2.2800 1.00 2563 145 0.2962 0.3669 REMARK 3 12 2.2800 - 2.2100 1.00 2558 141 0.3314 0.3516 REMARK 3 13 2.2100 - 2.1500 1.00 2555 137 0.3405 0.3740 REMARK 3 14 2.1500 - 2.1000 0.98 2517 137 0.3804 0.4046 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.308 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.939 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3281 REMARK 3 ANGLE : 0.713 4477 REMARK 3 CHIRALITY : 0.044 514 REMARK 3 PLANARITY : 0.006 590 REMARK 3 DIHEDRAL : 14.598 1111 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7605 65.8298 12.5647 REMARK 3 T TENSOR REMARK 3 T11: 0.4778 T22: 0.7845 REMARK 3 T33: 0.3688 T12: -0.0261 REMARK 3 T13: 0.0167 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 8.4654 L22: 7.6437 REMARK 3 L33: 4.4737 L12: -1.5095 REMARK 3 L13: -2.6357 L23: 1.5806 REMARK 3 S TENSOR REMARK 3 S11: 0.0909 S12: 0.6318 S13: 0.5967 REMARK 3 S21: 0.0269 S22: 0.0963 S23: -0.2437 REMARK 3 S31: -0.1095 S32: 0.1173 S33: -0.0335 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 45 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3551 65.1129 9.1489 REMARK 3 T TENSOR REMARK 3 T11: 0.3506 T22: 0.7058 REMARK 3 T33: 0.3932 T12: 0.0047 REMARK 3 T13: 0.0291 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 6.4081 L22: 5.8942 REMARK 3 L33: 5.7628 L12: -1.2973 REMARK 3 L13: -2.3147 L23: 1.6063 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: -0.0663 S13: 0.0871 REMARK 3 S21: 0.2118 S22: 0.1024 S23: 0.1374 REMARK 3 S31: 0.2450 S32: -0.3247 S33: -0.0841 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 96 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4288 49.5229 -3.0501 REMARK 3 T TENSOR REMARK 3 T11: 0.3917 T22: 0.7022 REMARK 3 T33: 0.3614 T12: 0.0026 REMARK 3 T13: -0.0033 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 2.6332 L22: 2.5435 REMARK 3 L33: 1.3447 L12: -1.3142 REMARK 3 L13: -0.3506 L23: -0.3725 REMARK 3 S TENSOR REMARK 3 S11: 0.1494 S12: 0.4256 S13: -0.0250 REMARK 3 S21: -0.2967 S22: -0.0654 S23: 0.0721 REMARK 3 S31: 0.0194 S32: -0.2529 S33: -0.0924 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 242 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7914 38.0244 15.8824 REMARK 3 T TENSOR REMARK 3 T11: 0.8166 T22: 0.9566 REMARK 3 T33: 0.7233 T12: -0.0761 REMARK 3 T13: -0.0150 T23: 0.2325 REMARK 3 L TENSOR REMARK 3 L11: 8.4800 L22: 4.3168 REMARK 3 L33: 3.1593 L12: 5.8222 REMARK 3 L13: 0.5929 L23: -0.3630 REMARK 3 S TENSOR REMARK 3 S11: -0.2461 S12: -1.1298 S13: -1.1565 REMARK 3 S21: 2.1156 S22: 0.2330 S23: -0.8615 REMARK 3 S31: 1.2797 S32: -0.2217 S33: 0.0576 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6269 100.6349 15.6519 REMARK 3 T TENSOR REMARK 3 T11: 0.7573 T22: 0.6042 REMARK 3 T33: 1.4718 T12: 0.0297 REMARK 3 T13: -0.1188 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 5.3138 L22: 3.7096 REMARK 3 L33: 4.8547 L12: -0.4428 REMARK 3 L13: -0.6368 L23: -1.1355 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: 0.1359 S13: 1.2975 REMARK 3 S21: -0.0619 S22: 0.2735 S23: 1.4005 REMARK 3 S31: 0.0603 S32: -0.4571 S33: -0.2711 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5194 85.3830 20.4644 REMARK 3 T TENSOR REMARK 3 T11: 0.4147 T22: 0.5846 REMARK 3 T33: 0.6248 T12: 0.0627 REMARK 3 T13: 0.0159 T23: -0.1678 REMARK 3 L TENSOR REMARK 3 L11: 4.0622 L22: 6.4316 REMARK 3 L33: 3.4109 L12: 1.5604 REMARK 3 L13: 0.6772 L23: -0.7018 REMARK 3 S TENSOR REMARK 3 S11: -0.2144 S12: -0.3762 S13: 0.6935 REMARK 3 S21: 0.0929 S22: 0.0771 S23: -0.5758 REMARK 3 S31: -0.2118 S32: 0.1679 S33: 0.1142 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 224 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6442 88.5291 28.2465 REMARK 3 T TENSOR REMARK 3 T11: 0.6729 T22: 0.8921 REMARK 3 T33: 0.9679 T12: 0.2049 REMARK 3 T13: 0.0533 T23: -0.2333 REMARK 3 L TENSOR REMARK 3 L11: 7.4355 L22: 8.6425 REMARK 3 L33: 5.2419 L12: 4.5097 REMARK 3 L13: -0.7152 L23: 0.0518 REMARK 3 S TENSOR REMARK 3 S11: 0.2919 S12: -1.3848 S13: 1.7975 REMARK 3 S21: 1.1241 S22: -0.5306 S23: 0.9185 REMARK 3 S31: -0.2802 S32: -0.3308 S33: 0.2464 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Q4I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.886 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38486 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 45.023 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 16.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M BIS-TRIS REMARK 280 PH 7.0, 30% POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.51150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 22.51150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 65.06400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 110.41600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 65.06400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 110.41600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.51150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 65.06400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 110.41600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 22.51150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 65.06400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 110.41600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 24 REMARK 465 GLY A 24 REMARK 465 ALA A 25 REMARK 465 MET A 26 REMARK 465 ILE A 160 REMARK 465 ASP A 161 REMARK 465 ALA A 162 REMARK 465 ASN A 163 REMARK 465 THR A 164 REMARK 465 CYS A 165 REMARK 465 GLY A 166 REMARK 465 GLU A 167 REMARK 465 ASP A 168 REMARK 465 SER A 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET B 26 CG SD CE REMARK 470 LYS B 33 NZ REMARK 470 ILE B 36 CD1 REMARK 470 THR B 70 OG1 CG2 REMARK 470 GLU B 99 CG CD OE1 OE2 REMARK 470 LYS B 100 CD CE NZ REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 ARG B 109 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 110 CG CD OE1 OE2 REMARK 470 LYS B 121 NZ REMARK 470 LYS B 130 CD CE NZ REMARK 470 GLN B 132 CG CD OE1 NE2 REMARK 470 LYS B 143 CG CD CE NZ REMARK 470 LYS B 146 CD CE NZ REMARK 470 LYS B 147 CD CE NZ REMARK 470 ILE B 160 CG1 CG2 CD1 REMARK 470 THR B 164 OG1 CG2 REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 GLU B 180 CD OE1 OE2 REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 LYS B 219 CE NZ REMARK 470 ARG B 247 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 250 CG CD NE CZ NH1 NH2 REMARK 470 SER B 251 OG REMARK 470 ILE A 28 CG1 CG2 CD1 REMARK 470 GLU A 29 CD OE1 OE2 REMARK 470 LEU A 30 CG CD1 CD2 REMARK 470 VAL A 32 CG1 CG2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 ILE A 36 CG1 CG2 CD1 REMARK 470 ASP A 37 CG OD1 OD2 REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 SER A 40 OG REMARK 470 ILE A 41 CG1 CG2 CD1 REMARK 470 SER A 47 OG REMARK 470 ILE A 53 CG1 CG2 CD1 REMARK 470 LYS A 57 CE NZ REMARK 470 VAL A 59 CG1 CG2 REMARK 470 VAL A 60 CG1 CG2 REMARK 470 PHE A 61 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 62 CG OD1 ND2 REMARK 470 VAL A 63 CG1 CG2 REMARK 470 THR A 64 OG1 CG2 REMARK 470 VAL A 66 CG1 CG2 REMARK 470 ASP A 67 CG OD1 OD2 REMARK 470 LEU A 68 CD1 CD2 REMARK 470 THR A 70 OG1 CG2 REMARK 470 LEU A 75 CG CD1 CD2 REMARK 470 THR A 76 OG1 CG2 REMARK 470 PHE A 77 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 78 CG OD1 ND2 REMARK 470 ASP A 80 CG OD1 OD2 REMARK 470 VAL A 81 CG1 CG2 REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 VAL A 85 CG1 CG2 REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 ILE A 88 CG1 CG2 CD1 REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 PHE A 91 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 THR A 95 OG1 CG2 REMARK 470 LEU A 96 CD1 CD2 REMARK 470 THR A 97 OG1 CG2 REMARK 470 GLU A 99 CG CD OE1 OE2 REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 LEU A 104 CG CD1 CD2 REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 ARG A 109 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 GLN A 131 CG CD OE1 NE2 REMARK 470 GLN A 132 CG CD OE1 NE2 REMARK 470 LYS A 146 NZ REMARK 470 LYS A 147 CG CD CE NZ REMARK 470 LEU A 156 CG CD1 CD2 REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 LYS A 219 CG CD CE NZ REMARK 470 SER A 235 OG REMARK 470 GLU A 236 CG CD OE1 OE2 REMARK 470 LEU A 239 CG CD1 CD2 REMARK 470 VAL A 244 CG1 CG2 REMARK 470 ARG A 247 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 248 CD1 CD2 REMARK 470 SER A 249 OG REMARK 470 ARG A 250 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 159 O HOH B 401 1.81 REMARK 500 O ILE B 116 O HOH B 402 1.91 REMARK 500 O TYR A 205 O HOH A 401 2.03 REMARK 500 OG1 THR A 142 O HOH A 402 2.08 REMARK 500 OG1 THR B 76 O HOH B 403 2.10 REMARK 500 OH TYR A 241 O HOH A 403 2.19 REMARK 500 OD1 ASN B 112 O HOH B 404 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 127 OE2 GLU B 167 1556 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS B 44 101.79 -173.92 REMARK 500 LEU B 68 -46.87 62.71 REMARK 500 ASP B 84 115.02 76.04 REMARK 500 LEU B 248 71.25 -69.19 REMARK 500 ASN A 43 96.83 -69.18 REMARK 500 ASP A 67 83.31 -69.46 REMARK 500 ASP A 84 -18.41 92.87 REMARK 500 VAL A 85 -66.22 66.77 REMARK 500 REMARK 500 REMARK: NULL DBREF 8Q4I B 28 251 UNP Q9NZA1 CLIC5_HUMAN 16 251 DBREF 8Q4I A 28 251 UNP Q9NZA1 CLIC5_HUMAN 16 251 SEQADV 8Q4I GLY B 24 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I ALA B 25 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I MET B 26 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I GLY B 27 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I B UNP Q9NZA1 LYS 57 DELETION SEQADV 8Q4I B UNP Q9NZA1 ARG 58 DELETION SEQADV 8Q4I B UNP Q9NZA1 LYS 59 DELETION SEQADV 8Q4I B UNP Q9NZA1 PRO 60 DELETION SEQADV 8Q4I B UNP Q9NZA1 ALA 61 DELETION SEQADV 8Q4I B UNP Q9NZA1 ASP 62 DELETION SEQADV 8Q4I B UNP Q9NZA1 LEU 63 DELETION SEQADV 8Q4I B UNP Q9NZA1 HIS 64 DELETION SEQADV 8Q4I B UNP Q9NZA1 ASN 65 DELETION SEQADV 8Q4I B UNP Q9NZA1 LEU 66 DELETION SEQADV 8Q4I B UNP Q9NZA1 ALA 67 DELETION SEQADV 8Q4I B UNP Q9NZA1 PRO 68 DELETION SEQADV 8Q4I GLY A 24 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I ALA A 25 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I MET A 26 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I GLY A 27 UNP Q9NZA1 EXPRESSION TAG SEQADV 8Q4I A UNP Q9NZA1 LYS 57 DELETION SEQADV 8Q4I A UNP Q9NZA1 ARG 58 DELETION SEQADV 8Q4I A UNP Q9NZA1 LYS 59 DELETION SEQADV 8Q4I A UNP Q9NZA1 PRO 60 DELETION SEQADV 8Q4I A UNP Q9NZA1 ALA 61 DELETION SEQADV 8Q4I A UNP Q9NZA1 ASP 62 DELETION SEQADV 8Q4I A UNP Q9NZA1 LEU 63 DELETION SEQADV 8Q4I A UNP Q9NZA1 HIS 64 DELETION SEQADV 8Q4I A UNP Q9NZA1 ASN 65 DELETION SEQADV 8Q4I A UNP Q9NZA1 LEU 66 DELETION SEQADV 8Q4I A UNP Q9NZA1 ALA 67 DELETION SEQADV 8Q4I A UNP Q9NZA1 PRO 68 DELETION SEQRES 1 B 228 GLY ALA MET GLY ILE GLU LEU PHE VAL LYS ALA GLY ILE SEQRES 2 B 228 ASP GLY GLU SER ILE GLY ASN CYS PRO PHE SER GLN ARG SEQRES 3 B 228 LEU PHE MET ILE LEU TRP LEU LYS GLY VAL VAL PHE ASN SEQRES 4 B 228 VAL THR THR VAL ASP LEU GLY THR HIS PRO PRO PHE LEU SEQRES 5 B 228 THR PHE ASN GLY ASP VAL LYS THR ASP VAL ASN LYS ILE SEQRES 6 B 228 GLU GLU PHE LEU GLU GLU THR LEU THR PRO GLU LYS TYR SEQRES 7 B 228 PRO LYS LEU ALA ALA LYS HIS ARG GLU SER ASN THR ALA SEQRES 8 B 228 GLY ILE ASP ILE PHE SER LYS PHE SER ALA TYR ILE LYS SEQRES 9 B 228 ASN THR LYS GLN GLN ASN ASN ALA ALA LEU GLU ARG GLY SEQRES 10 B 228 LEU THR LYS ALA LEU LYS LYS LEU ASP ASP TYR LEU ASN SEQRES 11 B 228 THR PRO LEU PRO GLU GLU ILE ASP ALA ASN THR CYS GLY SEQRES 12 B 228 GLU ASP LYS GLY SER ARG ARG LYS PHE LEU ASP GLY ASP SEQRES 13 B 228 GLU LEU THR LEU ALA ASP CYS ASN LEU LEU PRO LYS LEU SEQRES 14 B 228 HIS VAL VAL LYS ILE VAL ALA LYS LYS TYR ARG ASN TYR SEQRES 15 B 228 ASP ILE PRO ALA GLU MET THR GLY LEU TRP ARG TYR LEU SEQRES 16 B 228 LYS ASN ALA TYR ALA ARG ASP GLU PHE THR ASN THR CYS SEQRES 17 B 228 ALA ALA ASP SER GLU ILE GLU LEU ALA TYR ALA ASP VAL SEQRES 18 B 228 ALA LYS ARG LEU SER ARG SER SEQRES 1 A 228 GLY ALA MET GLY ILE GLU LEU PHE VAL LYS ALA GLY ILE SEQRES 2 A 228 ASP GLY GLU SER ILE GLY ASN CYS PRO PHE SER GLN ARG SEQRES 3 A 228 LEU PHE MET ILE LEU TRP LEU LYS GLY VAL VAL PHE ASN SEQRES 4 A 228 VAL THR THR VAL ASP LEU GLY THR HIS PRO PRO PHE LEU SEQRES 5 A 228 THR PHE ASN GLY ASP VAL LYS THR ASP VAL ASN LYS ILE SEQRES 6 A 228 GLU GLU PHE LEU GLU GLU THR LEU THR PRO GLU LYS TYR SEQRES 7 A 228 PRO LYS LEU ALA ALA LYS HIS ARG GLU SER ASN THR ALA SEQRES 8 A 228 GLY ILE ASP ILE PHE SER LYS PHE SER ALA TYR ILE LYS SEQRES 9 A 228 ASN THR LYS GLN GLN ASN ASN ALA ALA LEU GLU ARG GLY SEQRES 10 A 228 LEU THR LYS ALA LEU LYS LYS LEU ASP ASP TYR LEU ASN SEQRES 11 A 228 THR PRO LEU PRO GLU GLU ILE ASP ALA ASN THR CYS GLY SEQRES 12 A 228 GLU ASP LYS GLY SER ARG ARG LYS PHE LEU ASP GLY ASP SEQRES 13 A 228 GLU LEU THR LEU ALA ASP CYS ASN LEU LEU PRO LYS LEU SEQRES 14 A 228 HIS VAL VAL LYS ILE VAL ALA LYS LYS TYR ARG ASN TYR SEQRES 15 A 228 ASP ILE PRO ALA GLU MET THR GLY LEU TRP ARG TYR LEU SEQRES 16 A 228 LYS ASN ALA TYR ALA ARG ASP GLU PHE THR ASN THR CYS SEQRES 17 A 228 ALA ALA ASP SER GLU ILE GLU LEU ALA TYR ALA ASP VAL SEQRES 18 A 228 ALA LYS ARG LEU SER ARG SER HET SO4 B 301 5 HET SO4 A 301 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *49(H2 O) HELIX 1 AA1 CYS B 44 GLY B 58 1 15 HELIX 2 AA2 ASP B 84 LEU B 96 1 13 HELIX 3 AA3 HIS B 108 ALA B 114 1 7 HELIX 4 AA4 ASP B 117 ASN B 128 1 12 HELIX 5 AA5 LYS B 130 GLN B 132 5 3 HELIX 6 AA6 ASN B 133 THR B 154 1 22 HELIX 7 AA7 LEU B 156 ASN B 163 1 8 HELIX 8 AA8 THR B 182 ASN B 204 1 23 HELIX 9 AA9 MET B 211 ALA B 223 1 13 HELIX 10 AB1 ARG B 224 ASN B 229 1 6 HELIX 11 AB2 ALA B 233 TYR B 241 1 9 HELIX 12 AB3 CYS A 44 GLY A 58 1 15 HELIX 13 AB4 VAL A 85 LEU A 96 1 12 HELIX 14 AB5 HIS A 108 ALA A 114 1 7 HELIX 15 AB6 ASP A 117 ASN A 128 1 12 HELIX 16 AB7 LYS A 130 THR A 154 1 25 HELIX 17 AB8 THR A 182 ASN A 204 1 23 HELIX 18 AB9 MET A 211 ARG A 224 1 14 HELIX 19 AC1 ARG A 224 CYS A 231 1 8 HELIX 20 AC2 ALA A 233 TYR A 241 1 9 SHEET 1 AA1 4 ASN B 62 VAL B 66 0 SHEET 2 AA1 4 ILE B 28 LYS B 33 1 N LEU B 30 O ASN B 62 SHEET 3 AA1 4 PHE B 74 PHE B 77 -1 O PHE B 74 N PHE B 31 SHEET 4 AA1 4 ASP B 80 LYS B 82 -1 O LYS B 82 N LEU B 75 SHEET 1 AA2 4 ASN A 62 THR A 65 0 SHEET 2 AA2 4 ILE A 28 VAL A 32 1 N LEU A 30 O ASN A 62 SHEET 3 AA2 4 PHE A 74 PHE A 77 -1 O THR A 76 N GLU A 29 SHEET 4 AA2 4 ASP A 80 LYS A 82 -1 O LYS A 82 N LEU A 75 CISPEP 1 PRO B 98 GLU B 99 0 9.63 CISPEP 2 PRO A 98 GLU A 99 0 5.89 CRYST1 130.128 220.832 45.023 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007685 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004528 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022211 0.00000