HEADER HYDROLASE 07-AUG-23 8Q4S TITLE CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE (SERB) FROM BRUCELLA TITLE 2 MELITENSIS IN COMPLEX WITH AP4 AND MAGNESIUM. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOSERINE PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: O-PHOSPHOSERINE PHOSPHOHYDROLASE; COMPND 5 EC: 3.1.3.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA MELITENSIS; SOURCE 3 ORGANISM_TAXID: 29459; SOURCE 4 GENE: BMEI0615; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX INHIBITOR SERINE BIOSYNTHESIS MAGNESIUM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.SCAILLET,J.WOUTERS REVDAT 1 21-AUG-24 8Q4S 0 JRNL AUTH T.SCAILLET,J.WOUTERS JRNL TITL CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE (SERB) FROM JRNL TITL 2 BRUCELLA MELITENSIS IN COMPLEX WITH AP4 AND MAGNESIUM. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.OSCARSSON,A.BETEVA,D.FLOT,E.GORDON,M.GUIJARRO,G.LEONARD, REMARK 1 AUTH 2 S.MCSWEENEY,S.MONACO,C.MUELLER-DIECKMANN,M.NANAO,D.NURIZZO, REMARK 1 AUTH 3 A.N.POPOV,D.VON STETTEN,O.SVENSSON,V.REY-BAKAIKOA,I.CHADO, REMARK 1 AUTH 4 L.M.G.CHAVAS,L.GADEA,P.GOURHANT,T.ISABET,P.LEGRAND,M.SAVKO, REMARK 1 AUTH 5 S.SIRIGU,W.SHEPARD,A.THOMPSON,U.MUELLER,J.NAN,M.EGUIRAUN, REMARK 1 AUTH 6 F.BOLMSTEN,A.NARDELLA,A.MILAN-OTERO,M.THUNNISSEN,M.HELLMIG, REMARK 1 AUTH 7 A.KASTNER,L.SCHMUCKERMAIER,M.GERLACH,C.FEILER,M.S.WEISS, REMARK 1 AUTH 8 M.W.BOWLER,A.GOBBO,G.PAPP,J.SINOIR,A.A.MCCARTHY,I.KARPICS, REMARK 1 AUTH 9 M.NIKOLOVA,G.BOURENKOV,T.SCHNEIDER,J.ANDREU,G.CUNI, REMARK 1 AUTH10 J.JUANHUIX,R.BOER,R.FOGH,P.KELLER,C.FLENSBURG,W.PACIOREK, REMARK 1 AUTH11 C.VONRHEIN,G.BRICOGNE,D.DE SANCTIS REMARK 1 TITL MXCUBE2: THE DAWN OF MXCUBE COLLABORATION. REMARK 1 REF J.SYNCHROTRON RADIAT. V. 26 393 2019 REMARK 1 REFN ESSN 1600-5775 REMARK 1 PMID 30855248 REMARK 1 DOI 10.1107/S1600577519001267 REMARK 1 REFERENCE 2 REMARK 1 AUTH W.KABSCH REMARK 1 TITL INTEGRATION, SCALING, SPACE-GROUP ASSIGNMENT AND REMARK 1 TITL 2 POST-REFINEMENT. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 66 133 2010 REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 20124693 REMARK 1 DOI 10.1107/S0907444909047374 REMARK 1 REFERENCE 3 REMARK 1 AUTH P.EMSLEY,B.LOHKAMP,W.G.SCOTT,K.COWTAN REMARK 1 TITL FEATURES AND DEVELOPMENT OF COOT. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 66 486 2010 REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 20383002 REMARK 1 DOI 10.1107/S0907444910007493 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1491 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5600 - 4.6300 1.00 2681 141 0.1500 0.1796 REMARK 3 2 4.6300 - 3.6800 1.00 2595 136 0.1417 0.1790 REMARK 3 3 3.6700 - 3.2100 1.00 2607 137 0.1869 0.2167 REMARK 3 4 3.2100 - 2.9200 1.00 2573 136 0.2080 0.2657 REMARK 3 5 2.9200 - 2.7100 1.00 2565 135 0.2303 0.2794 REMARK 3 6 2.7100 - 2.5500 1.00 2569 135 0.2402 0.3049 REMARK 3 7 2.5500 - 2.4200 1.00 2577 136 0.2320 0.2551 REMARK 3 8 2.4200 - 2.3200 1.00 2534 133 0.2256 0.2837 REMARK 3 9 2.3100 - 2.2300 1.00 2593 136 0.2272 0.2694 REMARK 3 10 2.2300 - 2.1500 1.00 2543 134 0.2488 0.3167 REMARK 3 11 2.1500 - 2.0800 0.98 2504 132 0.2866 0.3075 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.306 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.482 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2263 REMARK 3 ANGLE : 0.825 3068 REMARK 3 CHIRALITY : 0.051 368 REMARK 3 PLANARITY : 0.007 400 REMARK 3 DIHEDRAL : 6.794 330 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Q4S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132575. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 - 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29832 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 45.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 40.20 REMARK 200 R MERGE (I) : 0.14980 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.69600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.350 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM MALONATE, BIS-TRIS REMARK 280 PROPANE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.04000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.04000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.04000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.04000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 72.04000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 72.04000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 72.04000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 72.04000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 72.04000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 72.04000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 72.04000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 72.04000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.04000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.04000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.04000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.04000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 72.04000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 72.04000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 72.04000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 72.04000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 72.04000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 72.04000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 72.04000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 72.04000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 72.04000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 556 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 564 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 596 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 599 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -11 REMARK 465 PRO A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 MET A -7 REMARK 465 LEU A -6 REMARK 465 LEU A -5 REMARK 465 SER A -4 REMARK 465 MET A -3 REMARK 465 SER A -2 REMARK 465 GLN A -1 REMARK 465 GLN A 0 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 VAL A 1 CB CG1 CG2 REMARK 480 ASN A 29 CG OD1 ND2 REMARK 480 LEU A 48 CG CD1 CD2 REMARK 480 GLU A 51 CG CD OE1 OE2 REMARK 480 ARG A 77 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 271 CD CE NZ REMARK 480 ARG A 289 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 87 -69.15 -93.69 REMARK 500 LEU A 233 -165.33 -129.68 REMARK 500 ASP A 278 -163.92 -100.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 598 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 599 DISTANCE = 6.16 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 304 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 86 OD2 REMARK 620 2 ASP A 88 O 88.1 REMARK 620 3 ASP A 243 OD1 91.1 88.5 REMARK 620 4 E7P A 301 O1 85.1 97.6 172.7 REMARK 620 5 HOH A 416 O 83.6 171.6 90.5 82.9 REMARK 620 6 HOH A 419 O 178.7 90.9 88.1 95.8 97.4 REMARK 620 N 1 2 3 4 5 DBREF 8Q4S A -5 295 UNP Q8YI30 Q8YI30_BRUME 2 302 SEQADV 8Q4S GLY A -11 UNP Q8YI30 EXPRESSION TAG SEQADV 8Q4S PRO A -10 UNP Q8YI30 EXPRESSION TAG SEQADV 8Q4S GLY A -9 UNP Q8YI30 EXPRESSION TAG SEQADV 8Q4S SER A -8 UNP Q8YI30 EXPRESSION TAG SEQADV 8Q4S MET A -7 UNP Q8YI30 EXPRESSION TAG SEQADV 8Q4S LEU A -6 UNP Q8YI30 EXPRESSION TAG SEQRES 1 A 307 GLY PRO GLY SER MET LEU LEU SER MET SER GLN GLN VAL SEQRES 2 A 307 SER LEU VAL ALA THR LEU ILE ALA ASN PRO ALA LYS ALA SEQRES 3 A 307 ALA LEU ALA PRO SER LEU GLY ILE LYS ALA SER ALA ALA SEQRES 4 A 307 VAL ASN ALA THR GLY LEU TYR TRP LEU ALA ASP ASP ILE SEQRES 5 A 307 ALA CYS ASP ILE PRO LEU PRO LEU GLY MET GLU ALA SER SEQRES 6 A 307 GLU ALA ASP ALA SER LEU ARG ALA THR LEU ASP GLY ALA SEQRES 7 A 307 PRO ILE ASP VAL VAL VAL GLN GLU GLN GLU ARG ARG ARG SEQRES 8 A 307 LYS LYS ILE LEU ILE ALA ASP MET ASP SER THR MET ILE SEQRES 9 A 307 GLY GLN GLU CYS ILE ASP GLU LEU ALA GLU GLU ALA GLY SEQRES 10 A 307 LEU ARG ASP HIS VAL ALA ALA ILE THR ALA ARG ALA MET SEQRES 11 A 307 ASN GLY GLU ILE ALA PHE GLU PRO ALA LEU ARG GLU ARG SEQRES 12 A 307 VAL ALA LEU LEU LYS GLY LEU PRO LEU SER VAL ILE ASP SEQRES 13 A 307 LYS VAL ILE SER THR ARG ILE THR LEU THR PRO GLY GLY SEQRES 14 A 307 PRO GLN LEU VAL ARG THR MET ARG LYS HIS GLY ALA TYR SEQRES 15 A 307 THR ALA LEU VAL SER GLY GLY PHE THR SER PHE THR ARG SEQRES 16 A 307 ARG ILE ALA GLU MET ILE GLY PHE ASN GLU GLU ARG ALA SEQRES 17 A 307 ASN ARG LEU ILE ASP ASP GLY THR ARG LEU THR GLY THR SEQRES 18 A 307 VAL ALA GLU PRO ILE LEU GLY ARG GLU ALA LYS VAL GLU SEQRES 19 A 307 LYS LEU VAL GLU ILE ALA GLU ARG VAL GLY LEU THR PRO SEQRES 20 A 307 GLU ASP ALA ILE ALA VAL GLY ASP GLY ALA ASN ASP LEU SEQRES 21 A 307 GLY MET ILE GLN LEU ALA GLY THR GLY VAL ALA LEU HIS SEQRES 22 A 307 ALA LYS PRO ALA VAL ALA ALA GLN ALA LYS MET ARG ILE SEQRES 23 A 307 ASP HIS GLY ASP LEU THR ALA LEU LEU TYR ILE GLN GLY SEQRES 24 A 307 TYR ARG LYS ALA ASP PHE VAL GLN HET E7P A 301 11 HET GOL A 302 6 HET GOL A 303 6 HET MG A 304 1 HETNAM E7P (2S)-2-AMINO-4-PHOSPHONOBUTANOIC ACID HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 E7P C4 H10 N O5 P FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 MG MG 2+ FORMUL 6 HOH *199(H2 O) HELIX 1 AA1 PRO A 11 ALA A 14 5 4 HELIX 2 AA2 ALA A 17 ALA A 27 1 11 HELIX 3 AA3 GLU A 51 LEU A 63 1 13 HELIX 4 AA4 GLU A 95 GLU A 103 1 9 HELIX 5 AA5 LEU A 106 ASN A 119 1 14 HELIX 6 AA6 ALA A 123 LEU A 134 1 12 HELIX 7 AA7 SER A 141 ILE A 151 1 11 HELIX 8 AA8 GLY A 156 HIS A 167 1 12 HELIX 9 AA9 THR A 179 GLY A 190 1 12 HELIX 10 AB1 GLY A 216 VAL A 231 1 16 HELIX 11 AB2 THR A 234 GLU A 236 5 3 HELIX 12 AB3 GLY A 244 ASN A 246 5 3 HELIX 13 AB4 ASP A 247 ALA A 254 1 8 HELIX 14 AB5 LYS A 263 ALA A 268 1 6 HELIX 15 AB6 LEU A 279 GLN A 286 1 8 HELIX 16 AB7 ARG A 289 PHE A 293 5 5 SHEET 1 AA1 4 TYR A 34 ALA A 37 0 SHEET 2 AA1 4 ALA A 41 PRO A 45 -1 O ASP A 43 N TYR A 34 SHEET 3 AA1 4 LEU A 3 ALA A 9 -1 N ALA A 5 O ILE A 44 SHEET 4 AA1 4 ILE A 68 GLU A 74 -1 O GLN A 73 N VAL A 4 SHEET 1 AA2 6 GLU A 193 ASN A 197 0 SHEET 2 AA2 6 TYR A 170 PHE A 178 1 N LEU A 173 O GLU A 193 SHEET 3 AA2 6 ILE A 82 ALA A 85 1 N LEU A 83 O ALA A 172 SHEET 4 AA2 6 ALA A 238 GLY A 242 1 O ILE A 239 N ILE A 82 SHEET 5 AA2 6 THR A 256 LEU A 260 1 O VAL A 258 N ALA A 240 SHEET 6 AA2 6 MET A 272 ILE A 274 1 O MET A 272 N ALA A 259 SHEET 1 AA3 2 LEU A 199 ASP A 201 0 SHEET 2 AA3 2 LEU A 206 VAL A 210 -1 O THR A 209 N ILE A 200 LINK OD2 ASP A 86 MG MG A 304 1555 1555 1.91 LINK O ASP A 88 MG MG A 304 1555 1555 2.33 LINK OD1 ASP A 243 MG MG A 304 1555 1555 2.21 LINK O1 E7P A 301 MG MG A 304 1555 1555 2.36 LINK MG MG A 304 O HOH A 416 1555 1555 2.42 LINK MG MG A 304 O HOH A 419 1555 1555 2.30 CISPEP 1 GLU A 212 PRO A 213 0 0.06 CRYST1 144.080 144.080 144.080 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006941 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006941 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006941 0.00000