HEADER TRANSFERASE 10-AUG-23 8Q61 TITLE CO-CRYSTAL STRUCTURE OF HUMAN AKT2 WITH COMPOUND 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAC-BETA SERINE/THREONINE-PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AKT2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7106 KEYWDS PROTEIN KINASE INHIBITOR COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.HARRISON,O.BARKER REVDAT 1 16-AUG-23 8Q61 0 JRNL AUTH N.PAGE,M.WAPPETT,C.R.O'DOWD,M.O'ROURKE,G.GAVORY,L.ZHANG, JRNL AUTH 2 J.S.S.ROUNTREE,L.JORDAN,O.BARKER,H.GIBSON,C.BOYD, JRNL AUTH 3 S.FEUTREN-BURTON,E.MCLEAN,G.TREVITT,T.HARRISON JRNL TITL IDENTIFICATION AND DEVELOPMENT OF A SUBTYPE-SELECTIVE JRNL TITL 2 ALLOSTERIC AKT INHIBITOR SUITABLE FOR CLINICAL DEVELOPMENT. JRNL REF SCI REP V. 12 15715 2022 JRNL REFN ESSN 2045-2322 JRNL PMID 36127435 JRNL DOI 10.1172/JCI41680 REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1187 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.32 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1613 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3152 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : -1.08000 REMARK 3 B33 (A**2) : 0.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.298 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.585 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3237 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3110 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4368 ; 1.547 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7129 ; 1.212 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 6.551 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;30.366 ;22.603 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 573 ;13.374 ;15.052 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;20.541 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 469 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3517 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 755 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1534 ; 2.572 ; 3.473 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1533 ; 2.569 ; 3.474 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1909 ; 3.964 ; 5.833 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1910 ; 3.965 ; 5.833 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1703 ; 3.806 ; 4.153 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1703 ; 3.802 ; 4.153 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2458 ; 5.696 ; 6.751 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3449 ; 7.916 ;31.339 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3428 ; 7.900 ;31.142 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): -1.7820 -13.8070 -16.7460 REMARK 3 T TENSOR REMARK 3 T11: 0.1505 T22: 0.1495 REMARK 3 T33: 0.1321 T12: 0.0422 REMARK 3 T13: -0.0112 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.7561 L22: 5.1719 REMARK 3 L33: 4.2387 L12: -0.1579 REMARK 3 L13: -0.1842 L23: 3.0874 REMARK 3 S TENSOR REMARK 3 S11: -0.0830 S12: 0.0792 S13: 0.1718 REMARK 3 S21: 0.1464 S22: 0.0257 S23: 0.2020 REMARK 3 S31: -0.0807 S32: -0.1307 S33: 0.0573 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 228 REMARK 3 ORIGIN FOR THE GROUP (A): 1.9830 1.5450 7.0950 REMARK 3 T TENSOR REMARK 3 T11: 0.1128 T22: 0.1399 REMARK 3 T33: 0.1119 T12: -0.0081 REMARK 3 T13: -0.0123 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 4.5819 L22: 5.3309 REMARK 3 L33: 4.8814 L12: 1.0925 REMARK 3 L13: 0.3263 L23: -1.2899 REMARK 3 S TENSOR REMARK 3 S11: -0.0286 S12: 0.0331 S13: -0.2624 REMARK 3 S21: -0.0824 S22: -0.0217 S23: -0.7263 REMARK 3 S31: 0.2770 S32: 0.6619 S33: 0.0503 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 229 A 500 REMARK 3 ORIGIN FOR THE GROUP (A): -12.7060 15.9750 -9.6000 REMARK 3 T TENSOR REMARK 3 T11: 0.0896 T22: 0.0218 REMARK 3 T33: 0.0066 T12: -0.0329 REMARK 3 T13: 0.0041 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 2.1595 L22: 2.6117 REMARK 3 L33: 4.3299 L12: -0.2657 REMARK 3 L13: 0.6125 L23: 0.3906 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: -0.0116 S13: -0.0486 REMARK 3 S21: 0.0191 S22: -0.0836 S23: 0.1181 REMARK 3 S31: -0.0740 S32: -0.1589 S33: 0.0464 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8Q61 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132650. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22371 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320 REMARK 200 RESOLUTION RANGE LOW (A) : 61.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 0.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.44100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MERLOT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, 1.5 M NAH2PO4, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.83350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.52400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.94250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.52400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.83350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.94250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 44 REMARK 465 PRO A 45 REMARK 465 ASP A 46 REMARK 465 GLN A 47 REMARK 465 THR A 48 REMARK 465 LEU A 49 REMARK 465 GLN A 112 REMARK 465 ARG A 113 REMARK 465 ALA A 114 REMARK 465 PRO A 115 REMARK 465 GLY A 116 REMARK 465 GLU A 117 REMARK 465 ASP A 118 REMARK 465 PRO A 119 REMARK 465 MET A 120 REMARK 465 ASP A 121 REMARK 465 TYR A 122 REMARK 465 LYS A 123 REMARK 465 CYS A 124 REMARK 465 GLY A 125 REMARK 465 SER A 126 REMARK 465 PRO A 127 REMARK 465 SER A 128 REMARK 465 ASP A 129 REMARK 465 SER A 130 REMARK 465 SER A 131 REMARK 465 THR A 132 REMARK 465 THR A 133 REMARK 465 GLU A 134 REMARK 465 GLU A 135 REMARK 465 MET A 136 REMARK 465 GLU A 137 REMARK 465 VAL A 138 REMARK 465 ALA A 139 REMARK 465 VAL A 140 REMARK 465 SER A 141 REMARK 465 LYS A 142 REMARK 465 ALA A 143 REMARK 465 ARG A 144 REMARK 465 ALA A 145 REMARK 465 ASN A 206 REMARK 465 THR A 207 REMARK 465 LYS A 308 REMARK 465 THR A 309 REMARK 465 PHE A 310 REMARK 465 CYS A 311 REMARK 465 GLY A 312 REMARK 465 THR A 313 REMARK 465 ASN A 352 REMARK 465 GLN A 353 REMARK 465 ASP A 354 REMARK 465 HIS A 355 REMARK 465 GLU A 356 REMARK 465 THR A 436 REMARK 465 ARG A 437 REMARK 465 TYR A 438 REMARK 465 PHE A 439 REMARK 465 ASP A 440 REMARK 465 ASP A 441 REMARK 465 GLU A 442 REMARK 465 PHE A 443 REMARK 465 THR A 444 REMARK 465 ALA A 445 REMARK 465 GLN A 446 REMARK 465 SER A 447 REMARK 465 ILE A 448 REMARK 465 THR A 449 REMARK 465 ILE A 450 REMARK 465 THR A 451 REMARK 465 PRO A 452 REMARK 465 PRO A 453 REMARK 465 ASP A 454 REMARK 465 ARG A 455 REMARK 465 TYR A 456 REMARK 465 ASP A 457 REMARK 465 SER A 458 REMARK 465 LEU A 459 REMARK 465 GLY A 460 REMARK 465 LEU A 461 REMARK 465 LEU A 462 REMARK 465 GLU A 463 REMARK 465 LEU A 464 REMARK 465 ASP A 465 REMARK 465 GLN A 466 REMARK 465 ARG A 467 REMARK 465 THR A 468 REMARK 465 HIS A 469 REMARK 465 PHE A 470 REMARK 465 PRO A 471 REMARK 465 GLN A 472 REMARK 465 PHE A 473 REMARK 465 SER A 474 REMARK 465 TYR A 475 REMARK 465 SER A 476 REMARK 465 ALA A 477 REMARK 465 SER A 478 REMARK 465 ILE A 479 REMARK 465 ARG A 480 REMARK 465 GLU A 481 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLY A -1 N REMARK 480 ARG A 15 CZ NH1 NH2 REMARK 480 LYS A 20 NZ REMARK 480 GLU A 40 CG CD OE1 OE2 REMARK 480 GLU A 59 CD OE1 OE2 REMARK 480 LYS A 64 CE NZ REMARK 480 LYS A 111 CD CE NZ REMARK 480 LYS A 146 NZ REMARK 480 ARG A 176 NE CZ NH1 NH2 REMARK 480 ILE A 188 CD1 REMARK 480 LYS A 191 CD CE NZ REMARK 480 ASP A 192 CG OD1 OD2 REMARK 480 GLU A 200 CD OE1 OE2 REMARK 480 HIS A 222 CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 250 CD OE1 OE2 REMARK 480 LYS A 277 NZ REMARK 480 GLU A 299 CG CD OE1 OE2 REMARK 480 THR A 306 OG1 CG2 REMARK 480 GLU A 315 CG CD OE1 OE2 REMARK 480 ASP A 326 CG OD1 OD2 REMARK 480 LYS A 420 NZ REMARK 480 GLN A 429 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 80 -96.90 60.28 REMARK 500 HIS A 209 65.16 -151.51 REMARK 500 THR A 221 -155.94 -91.09 REMARK 500 ARG A 245 -52.21 79.39 REMARK 500 ARG A 274 -25.65 78.27 REMARK 500 TYR A 316 78.05 -103.59 REMARK 500 ASP A 324 42.33 73.10 REMARK 500 ASP A 399 -116.96 64.65 REMARK 500 REMARK 500 REMARK: NULL DBREF 8Q61 A 1 481 UNP P31751 AKT2_HUMAN 1 481 SEQADV 8Q61 GLY A -1 UNP P31751 EXPRESSION TAG SEQADV 8Q61 ALA A 0 UNP P31751 EXPRESSION TAG SEQADV 8Q61 ASP A 2 UNP P31751 ASN 2 ENGINEERED MUTATION SEQRES 1 A 483 GLY ALA MET ASP GLU VAL SER VAL ILE LYS GLU GLY TRP SEQRES 2 A 483 LEU HIS LYS ARG GLY GLU TYR ILE LYS THR TRP ARG PRO SEQRES 3 A 483 ARG TYR PHE LEU LEU LYS SER ASP GLY SER PHE ILE GLY SEQRES 4 A 483 TYR LYS GLU ARG PRO GLU ALA PRO ASP GLN THR LEU PRO SEQRES 5 A 483 PRO LEU ASN ASN PHE SER VAL ALA GLU CYS GLN LEU MET SEQRES 6 A 483 LYS THR GLU ARG PRO ARG PRO ASN THR PHE VAL ILE ARG SEQRES 7 A 483 CYS LEU GLN TRP THR THR VAL ILE GLU ARG THR PHE HIS SEQRES 8 A 483 VAL ASP SER PRO ASP GLU ARG GLU GLU TRP MET ARG ALA SEQRES 9 A 483 ILE GLN MET VAL ALA ASN SER LEU LYS GLN ARG ALA PRO SEQRES 10 A 483 GLY GLU ASP PRO MET ASP TYR LYS CYS GLY SER PRO SER SEQRES 11 A 483 ASP SER SER THR THR GLU GLU MET GLU VAL ALA VAL SER SEQRES 12 A 483 LYS ALA ARG ALA LYS VAL THR MET ASN ASP PHE ASP TYR SEQRES 13 A 483 LEU LYS LEU LEU GLY LYS GLY THR PHE GLY LYS VAL ILE SEQRES 14 A 483 LEU VAL ARG GLU LYS ALA THR GLY ARG TYR TYR ALA MET SEQRES 15 A 483 LYS ILE LEU ARG LYS GLU VAL ILE ILE ALA LYS ASP GLU SEQRES 16 A 483 VAL ALA HIS THR VAL THR GLU SER ARG VAL LEU GLN ASN SEQRES 17 A 483 THR ARG HIS PRO PHE LEU THR ALA LEU LYS TYR ALA PHE SEQRES 18 A 483 GLN THR HIS ASP ARG LEU CYS PHE VAL MET GLU TYR ALA SEQRES 19 A 483 ASN GLY GLY GLU LEU PHE PHE HIS LEU SER ARG GLU ARG SEQRES 20 A 483 VAL PHE THR GLU GLU ARG ALA ARG PHE TYR GLY ALA GLU SEQRES 21 A 483 ILE VAL SER ALA LEU GLU TYR LEU HIS SER ARG ASP VAL SEQRES 22 A 483 VAL TYR ARG ASP ILE LYS LEU GLU ASN LEU MET LEU ASP SEQRES 23 A 483 LYS ASP GLY HIS ILE LYS ILE THR ASP PHE GLY LEU CYS SEQRES 24 A 483 LYS GLU GLY ILE SER ASP GLY ALA THR MET LYS THR PHE SEQRES 25 A 483 CYS GLY THR PRO GLU TYR LEU ALA PRO GLU VAL LEU GLU SEQRES 26 A 483 ASP ASN ASP TYR GLY ARG ALA VAL ASP TRP TRP GLY LEU SEQRES 27 A 483 GLY VAL VAL MET TYR GLU MET MET CYS GLY ARG LEU PRO SEQRES 28 A 483 PHE TYR ASN GLN ASP HIS GLU ARG LEU PHE GLU LEU ILE SEQRES 29 A 483 LEU MET GLU GLU ILE ARG PHE PRO ARG THR LEU SER PRO SEQRES 30 A 483 GLU ALA LYS SER LEU LEU ALA GLY LEU LEU LYS LYS ASP SEQRES 31 A 483 PRO LYS GLN ARG LEU GLY GLY GLY PRO SER ASP ALA LYS SEQRES 32 A 483 GLU VAL MET GLU HIS ARG PHE PHE LEU SER ILE ASN TRP SEQRES 33 A 483 GLN ASP VAL VAL GLN LYS LYS LEU LEU PRO PRO PHE LYS SEQRES 34 A 483 PRO GLN VAL THR SER GLU VAL ASP THR ARG TYR PHE ASP SEQRES 35 A 483 ASP GLU PHE THR ALA GLN SER ILE THR ILE THR PRO PRO SEQRES 36 A 483 ASP ARG TYR ASP SER LEU GLY LEU LEU GLU LEU ASP GLN SEQRES 37 A 483 ARG THR HIS PHE PRO GLN PHE SER TYR SER ALA SER ILE SEQRES 38 A 483 ARG GLU HET K06 A 501 33 HET GOL A 502 6 HET PO4 A 503 5 HET PO4 A 504 5 HET PO4 A 505 5 HET MES A 506 12 HETNAM K06 6-[4-(1-AZANYL-3-METHYL-3-OXIDANYL-CYCLOBUTYL)PHENYL]- HETNAM 2 K06 7-PHENYL-1-PROPYL-PYRIDO[2,3-B][1,4]OXAZIN-2-ONE HETNAM GOL GLYCEROL HETNAM PO4 PHOSPHATE ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 K06 C27 H29 N3 O3 FORMUL 3 GOL C3 H8 O3 FORMUL 4 PO4 3(O4 P 3-) FORMUL 7 MES C6 H13 N O4 S FORMUL 8 HOH *146(H2 O) HELIX 1 AA1 SER A 92 LEU A 110 1 19 HELIX 2 AA2 THR A 148 ASN A 150 5 3 HELIX 3 AA3 ALA A 190 LEU A 204 1 15 HELIX 4 AA4 GLU A 236 ARG A 245 1 10 HELIX 5 AA5 THR A 248 ARG A 269 1 22 HELIX 6 AA6 LYS A 277 GLU A 279 5 3 HELIX 7 AA7 ALA A 318 GLU A 323 1 6 HELIX 8 AA8 ARG A 329 GLY A 346 1 18 HELIX 9 AA9 LEU A 358 GLU A 365 1 8 HELIX 10 AB1 SER A 374 LEU A 385 1 12 HELIX 11 AB2 ASP A 399 GLU A 405 1 7 HELIX 12 AB3 HIS A 406 LEU A 410 5 5 HELIX 13 AB4 ASN A 413 GLN A 419 1 7 SHEET 1 AA1 7 ASN A 53 SER A 56 0 SHEET 2 AA1 7 SER A 34 TYR A 38 -1 N PHE A 35 O PHE A 55 SHEET 3 AA1 7 TRP A 22 LYS A 30 -1 N LYS A 30 O SER A 34 SHEET 4 AA1 7 VAL A 6 ARG A 15 -1 N LYS A 8 O LEU A 29 SHEET 5 AA1 7 THR A 82 HIS A 89 -1 O HIS A 89 N HIS A 13 SHEET 6 AA1 7 THR A 72 GLN A 79 -1 N GLN A 79 O THR A 82 SHEET 7 AA1 7 GLN A 61 THR A 65 -1 N GLN A 61 O ARG A 76 SHEET 1 AA2 5 PHE A 152 GLY A 161 0 SHEET 2 AA2 5 GLY A 164 GLU A 171 -1 O VAL A 166 N LEU A 158 SHEET 3 AA2 5 TYR A 177 LEU A 183 -1 O ILE A 182 N LYS A 165 SHEET 4 AA2 5 LEU A 225 MET A 229 -1 O PHE A 227 N LYS A 181 SHEET 5 AA2 5 LEU A 215 GLN A 220 -1 N TYR A 217 O VAL A 228 SHEET 1 AA3 2 LEU A 281 LEU A 283 0 SHEET 2 AA3 2 ILE A 289 ILE A 291 -1 O LYS A 290 N MET A 282 CISPEP 1 ARG A 67 PRO A 68 0 4.43 CRYST1 63.667 113.885 73.048 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015707 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013690 0.00000