HEADER RNA BINDING PROTEIN 11-AUG-23 8Q66 TITLE CRYSTAL STRUCTURE OF THE C. ELEGANS MUT-7 MUT-8 CTD COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXONUCLEASE MUT-7; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SH2 DOMAIN-CONTAINING PROTEIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: MUT-7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: DERIVATIVE; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 10 ORGANISM_TAXID: 6239; SOURCE 11 GENE: RDE-2; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_VARIANT: DERIVATIVE KEYWDS SMALL RNA AMPLIFICATION MUTATOR COMPLEX EXORIBONUCLEASE, RNA BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.FALK,V.BUSETTO REVDAT 1 06-MAR-24 8Q66 0 JRNL AUTH S.FALK,V.BUSETTO JRNL TITL MUT-7 A CONSERVED EXORIBONUCLEASE FUNCTIONING IN SMALL RNA JRNL TITL 2 BIOGENESIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 42083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 67.9100 - 5.0000 0.99 2766 138 0.1628 0.1865 REMARK 3 2 5.0000 - 3.9700 1.00 2674 156 0.1391 0.1659 REMARK 3 3 3.9700 - 3.4700 1.00 2679 143 0.1581 0.1853 REMARK 3 4 3.4700 - 3.1500 1.00 2708 115 0.1840 0.2247 REMARK 3 5 3.1500 - 2.9200 1.00 2669 146 0.1896 0.2353 REMARK 3 6 2.9200 - 2.7500 1.00 2666 156 0.2126 0.2687 REMARK 3 7 2.7500 - 2.6100 1.00 2644 143 0.2267 0.3082 REMARK 3 8 2.6100 - 2.5000 1.00 2650 136 0.2388 0.2745 REMARK 3 9 2.5000 - 2.4000 1.00 2683 129 0.2327 0.2742 REMARK 3 10 2.4000 - 2.3200 1.00 2668 147 0.2327 0.2941 REMARK 3 11 2.3200 - 2.2500 1.00 2643 130 0.2542 0.2961 REMARK 3 12 2.2500 - 2.1800 1.00 2646 147 0.2704 0.3054 REMARK 3 13 2.1800 - 2.1300 1.00 2650 135 0.2937 0.2869 REMARK 3 14 2.1300 - 2.0700 1.00 2646 147 0.3232 0.3674 REMARK 3 15 2.0700 - 2.0300 0.97 2582 141 0.3816 0.3796 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.313 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.496 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4277 REMARK 3 ANGLE : 0.561 5795 REMARK 3 CHIRALITY : 0.046 642 REMARK 3 PLANARITY : 0.015 751 REMARK 3 DIHEDRAL : 6.191 572 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 628 THROUGH 641 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2826 -12.9955 22.4069 REMARK 3 T TENSOR REMARK 3 T11: 0.4381 T22: 0.4658 REMARK 3 T33: 0.6573 T12: -0.1028 REMARK 3 T13: -0.0587 T23: -0.1228 REMARK 3 L TENSOR REMARK 3 L11: 5.8623 L22: 2.6043 REMARK 3 L33: 6.0548 L12: 0.9926 REMARK 3 L13: 3.7148 L23: -0.7033 REMARK 3 S TENSOR REMARK 3 S11: 0.1089 S12: -0.1161 S13: 0.3346 REMARK 3 S21: -0.3387 S22: 0.3623 S23: 0.4264 REMARK 3 S31: 0.2486 S32: -0.2967 S33: -0.4885 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 642 THROUGH 661 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4343 -9.2854 21.9349 REMARK 3 T TENSOR REMARK 3 T11: 0.3450 T22: 0.4568 REMARK 3 T33: 0.5169 T12: 0.0272 REMARK 3 T13: 0.0597 T23: -0.1606 REMARK 3 L TENSOR REMARK 3 L11: 2.4796 L22: 2.0170 REMARK 3 L33: 4.5731 L12: 1.5084 REMARK 3 L13: -0.2576 L23: -0.7864 REMARK 3 S TENSOR REMARK 3 S11: -0.1923 S12: 0.5462 S13: -0.5934 REMARK 3 S21: -0.4129 S22: 0.1330 S23: -0.7561 REMARK 3 S31: 0.3893 S32: 0.2796 S33: 0.0487 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 662 THROUGH 735 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8556 8.7634 24.0989 REMARK 3 T TENSOR REMARK 3 T11: 0.2940 T22: 0.4045 REMARK 3 T33: 0.3325 T12: 0.0028 REMARK 3 T13: 0.0374 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 2.4900 L22: 3.1134 REMARK 3 L33: 2.7806 L12: -0.6072 REMARK 3 L13: 0.2157 L23: -0.4766 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: 0.4692 S13: 0.1365 REMARK 3 S21: -0.2738 S22: -0.0492 S23: -0.1277 REMARK 3 S31: -0.2296 S32: -0.0779 S33: -0.0145 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 736 THROUGH 831 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0307 -13.2366 41.9267 REMARK 3 T TENSOR REMARK 3 T11: 0.3119 T22: 0.2867 REMARK 3 T33: 0.4504 T12: -0.0087 REMARK 3 T13: -0.0277 T23: -0.0665 REMARK 3 L TENSOR REMARK 3 L11: 0.9076 L22: 0.6571 REMARK 3 L33: 2.7085 L12: 0.2050 REMARK 3 L13: -0.5846 L23: -0.7621 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: 0.0987 S13: -0.3122 REMARK 3 S21: 0.0103 S22: -0.0587 S23: -0.1166 REMARK 3 S31: 0.2315 S32: -0.0491 S33: 0.1067 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 832 THROUGH 846 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4351 -12.5946 61.2338 REMARK 3 T TENSOR REMARK 3 T11: 0.3397 T22: 0.3200 REMARK 3 T33: 0.4579 T12: 0.0359 REMARK 3 T13: -0.0628 T23: 0.0669 REMARK 3 L TENSOR REMARK 3 L11: 1.6705 L22: 3.0242 REMARK 3 L33: 2.5798 L12: -0.7099 REMARK 3 L13: 1.2714 L23: 0.0839 REMARK 3 S TENSOR REMARK 3 S11: -0.1126 S12: -0.3939 S13: -0.3349 REMARK 3 S21: 0.4955 S22: 0.1300 S23: 0.0305 REMARK 3 S31: 0.4621 S32: -0.0040 S33: -0.0426 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 847 THROUGH 898 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1204 -10.7982 45.7599 REMARK 3 T TENSOR REMARK 3 T11: 0.2927 T22: 0.2863 REMARK 3 T33: 0.3965 T12: -0.0218 REMARK 3 T13: -0.0077 T23: -0.0357 REMARK 3 L TENSOR REMARK 3 L11: 2.6053 L22: 1.2670 REMARK 3 L33: 4.2016 L12: 0.3015 REMARK 3 L13: -0.0420 L23: 0.8794 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: 0.1215 S13: -0.3713 REMARK 3 S21: 0.1041 S22: -0.0468 S23: 0.0298 REMARK 3 S31: 0.3637 S32: -0.3642 S33: 0.0453 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 326 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.3647 11.0118 56.2366 REMARK 3 T TENSOR REMARK 3 T11: 0.2917 T22: 0.2829 REMARK 3 T33: 0.4156 T12: -0.0119 REMARK 3 T13: 0.0059 T23: -0.0522 REMARK 3 L TENSOR REMARK 3 L11: 2.3312 L22: 2.2562 REMARK 3 L33: 4.0418 L12: 0.4669 REMARK 3 L13: -0.1430 L23: -0.1628 REMARK 3 S TENSOR REMARK 3 S11: 0.1607 S12: -0.1879 S13: 0.2229 REMARK 3 S21: 0.0831 S22: 0.0221 S23: -0.0336 REMARK 3 S31: -0.3745 S32: 0.3032 S33: -0.1573 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 447 THROUGH 567 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4975 3.3071 61.7405 REMARK 3 T TENSOR REMARK 3 T11: 0.3293 T22: 0.3381 REMARK 3 T33: 0.3001 T12: 0.0584 REMARK 3 T13: 0.0019 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 4.1646 L22: 2.7747 REMARK 3 L33: 2.1465 L12: 0.8731 REMARK 3 L13: 0.0394 L23: 0.0057 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: 0.1128 S13: 0.1982 REMARK 3 S21: -0.0502 S22: -0.0224 S23: 0.3418 REMARK 3 S31: -0.1485 S32: -0.4191 S33: 0.0219 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Q66 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132676. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87313 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20230630 REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42083 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 67.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.08813 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.12.1-4487 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 %W/V EDO_P8K (PRECIPITANT) 0.1 M REMARK 280 MB3 8.5 PH (BUFFER) 0.06 M DIVALENT (COMPLEX INGREDIENT), VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.54450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.52650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.54450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.52650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 899 REMARK 465 GLY B 317 REMARK 465 PRO B 318 REMARK 465 ASP B 319 REMARK 465 SER B 320 REMARK 465 MET B 321 REMARK 465 ASP B 322 REMARK 465 GLU B 323 REMARK 465 ASP B 324 REMARK 465 GLU B 325 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 810 NH2 ARG A 814 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 729 34.75 -142.11 REMARK 500 ASN A 741 54.73 -101.93 REMARK 500 ASN A 772 2.17 82.64 REMARK 500 ASP B 328 -178.52 68.79 REMARK 500 ASN B 339 64.01 -102.59 REMARK 500 ASP B 379 89.93 15.62 REMARK 500 ASN B 393 154.60 75.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 760 0.23 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 768 SG REMARK 620 2 CYS A 771 SG 111.0 REMARK 620 3 CYS A 887 SG 109.7 104.5 REMARK 620 4 CYS A 890 SG 103.5 116.9 111.2 REMARK 620 N 1 2 3 DBREF 8Q66 A 633 899 UNP P34607 MUT7_CAEEL 633 899 DBREF 8Q66 B 322 567 UNP Q19672 Q19672_CAEEL 322 567 SEQADV 8Q66 GLY A 628 UNP P34607 EXPRESSION TAG SEQADV 8Q66 PRO A 629 UNP P34607 EXPRESSION TAG SEQADV 8Q66 ASP A 630 UNP P34607 EXPRESSION TAG SEQADV 8Q66 SER A 631 UNP P34607 EXPRESSION TAG SEQADV 8Q66 MET A 632 UNP P34607 EXPRESSION TAG SEQADV 8Q66 GLY B 317 UNP Q19672 EXPRESSION TAG SEQADV 8Q66 PRO B 318 UNP Q19672 EXPRESSION TAG SEQADV 8Q66 ASP B 319 UNP Q19672 EXPRESSION TAG SEQADV 8Q66 SER B 320 UNP Q19672 EXPRESSION TAG SEQADV 8Q66 MET B 321 UNP Q19672 EXPRESSION TAG SEQRES 1 A 272 GLY PRO ASP SER MET SER TYR ARG LYS LEU LYS THR ILE SEQRES 2 A 272 PRO TRP LEU GLU LEU TYR ASP ILE LEU ARG SER HIS ARG SEQRES 3 A 272 ASN PRO THR ARG SER PRO GLN ARG PRO HIS ASP ILE LYS SEQRES 4 A 272 VAL ILE VAL ASP THR MET LEU ILE GLY PHE GLY LYS ASN SEQRES 5 A 272 LEU ARG ARG VAL GLY ILE ASP VAL ILE LEU PRO LYS ASP SEQRES 6 A 272 VAL SER ASP PHE ARG LYS TYR LEU LYS GLU ILE GLU ARG SEQRES 7 A 272 VAL GLY GLY GLU HIS LEU ARG HIS ILE ILE THR VAL PRO SEQRES 8 A 272 SER LYS SER TYR GLU ALA LEU LYS MET ASP TYR ASP ASN SEQRES 9 A 272 TYR THR ILE ALA ILE PRO GLU LEU ASN ASN MET SER PRO SEQRES 10 A 272 VAL ASP GLN LEU ILE GLU PHE PHE ASP LEU PHE ASN VAL SEQRES 11 A 272 ASP ILE ARG PRO GLU ASP VAL TYR PRO ARG CYS THR GLU SEQRES 12 A 272 CYS ASN SER ARG LEU GLN ILE LYS PHE PRO GLY PRO VAL SEQRES 13 A 272 LEU HIS PHE LEU HIS GLN TYR CYS VAL ILE HIS VAL GLN SEQRES 14 A 272 ASN VAL TYR ARG ALA ASP MET SER GLU PHE PRO LEU GLU SEQRES 15 A 272 GLU TRP TRP ASN ARG MET LEU HIS ILE ASN PRO ASP ASP SEQRES 16 A 272 TYR ASP GLY VAL LYS VAL GLU MET SER ARG PRO SER PRO SEQRES 17 A 272 THR SER LYS TRP ILE VAL ALA THR VAL PRO THR GLY CYS SEQRES 18 A 272 LEU HIS ILE THR ARG GLN THR ALA LEU HIS THR ASN LEU SEQRES 19 A 272 PRO ASP GLY ILE GLU VAL ARG ILE HIS LYS VAL PRO ASP SEQRES 20 A 272 ASP GLU PHE LYS ARG ARG ASN LEU SER PHE TYR VAL CYS SEQRES 21 A 272 GLY GLU CYS GLY THR VAL ALA CYS ASP GLY ARG GLY SEQRES 1 B 251 GLY PRO ASP SER MET ASP GLU ASP GLU ILE ASP ASP GLU SEQRES 2 B 251 ASP THR TYR GLY THR ARG GLY THR SER ASN ILE PRO MET SEQRES 3 B 251 ARG PRO PHE ILE LYS ASP LEU ALA PRO THR MET LEU GLN SEQRES 4 B 251 LEU LEU ARG GLN ASP LYS THR ASP SER GLU LYS PRO GLN SEQRES 5 B 251 SER ALA LEU CYS THR VAL VAL GLN LYS ILE ASP GLY PHE SEQRES 6 B 251 ALA ILE LEU TYR THR ALA LYS ARG ASP VAL ILE ASN VAL SEQRES 7 B 251 LEU LEU GLN GLU ARG SER CYS GLU GLY LEU GLU ARG SER SEQRES 8 B 251 PRO GLN LEU GLY ASP VAL ALA PHE PHE ASP ILE LEU PRO SEQRES 9 B 251 ARG ARG ILE GLU THR LYS ASP ARG LEU ILE PHE LYS ILE SEQRES 10 B 251 PRO TYR THR HIS ILE ALA VAL LYS LYS LYS PRO ASP THR SEQRES 11 B 251 PRO ASP SER LEU LEU LYS ILE ASP CYS PHE LYS ASN SER SEQRES 12 B 251 VAL ARG CYS PHE GLY GLY VAL LEU GLU MET LYS VAL LYS SEQRES 13 B 251 ILE ALA LEU SER LYS PRO GLU LEU VAL VAL GLU GLN TYR SEQRES 14 B 251 HIS ASP ASN THR GLU MET ASN SER ASP HIS HIS PHE TYR SEQRES 15 B 251 TYR LEU LYS ALA THR ASN GLY VAL LEU VAL THR ILE PRO SEQRES 16 B 251 LYS GLU ARG LEU LEU ASN HIS LEU ASN SER LYS LEU SER SEQRES 17 B 251 ALA ASP PHE ASP LEU ILE ALA TRP VAL VAL HIS ARG LYS SEQRES 18 B 251 PRO ILE GLY ASN VAL SER LEU HIS ILE GLY LYS GLY GLY SEQRES 19 B 251 GLU ALA TYR GLN GLN PHE THR ASN GLY ASP ILE ARG GLU SEQRES 20 B 251 LEU PRO PRO LEU HET ZN A 901 1 HET EDO A 902 10 HET EDO A 903 10 HET EDO A 904 10 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN ZN 2+ FORMUL 4 EDO 3(C2 H6 O2) FORMUL 7 HOH *250(H2 O) HELIX 1 AA1 LYS A 636 ILE A 640 5 5 HELIX 2 AA2 PRO A 641 ARG A 650 1 10 HELIX 3 AA3 ARG A 661 ASP A 664 5 4 HELIX 4 AA4 LEU A 673 VAL A 683 1 11 HELIX 5 AA5 ASP A 692 GLY A 707 1 16 HELIX 6 AA6 GLY A 708 LEU A 711 5 4 HELIX 7 AA7 SER A 719 ASP A 730 1 12 HELIX 8 AA8 SER A 743 PHE A 755 1 13 HELIX 9 AA9 GLY A 781 VAL A 792 1 12 HELIX 10 AB1 VAL A 792 VAL A 798 1 7 HELIX 11 AB2 PRO A 807 HIS A 817 1 11 HELIX 12 AB3 ILE A 818 TYR A 823 5 6 HELIX 13 AB4 ARG A 868 VAL A 872 5 5 HELIX 14 AB5 PRO A 873 ARG A 879 5 7 HELIX 15 AB6 ASP B 328 TYR B 332 5 5 HELIX 16 AB7 ILE B 346 ALA B 350 5 5 HELIX 17 AB8 THR B 352 ASP B 360 1 9 HELIX 18 AB9 GLU B 424 ILE B 430 5 7 HELIX 19 AC1 THR B 446 SER B 459 1 14 HELIX 20 AC2 LYS B 512 LEU B 516 1 5 HELIX 21 AC3 ASN B 517 LEU B 519 5 3 SHEET 1 AA1 4 ASP A 686 ILE A 688 0 SHEET 2 AA1 4 LYS A 666 VAL A 669 1 N VAL A 667 O ASP A 686 SHEET 3 AA1 4 HIS A 713 THR A 716 1 O HIS A 713 N LYS A 666 SHEET 4 AA1 4 THR A 733 ALA A 735 1 O ILE A 734 N ILE A 714 SHEET 1 AA2 3 GLN A 776 PRO A 780 0 SHEET 2 AA2 3 SER A 883 CYS A 887 -1 O PHE A 884 N PHE A 779 SHEET 3 AA2 3 VAL A 893 CYS A 895 -1 O ALA A 894 N TYR A 885 SHEET 1 AA3 5 GLU A 829 SER A 831 0 SHEET 2 AA3 5 VAL A 841 VAL A 844 -1 O VAL A 841 N SER A 831 SHEET 3 AA3 5 GLY A 847 HIS A 850 -1 O GLY A 847 N VAL A 844 SHEET 4 AA3 5 THR A 855 HIS A 858 -1 O THR A 855 N HIS A 850 SHEET 5 AA3 5 ILE A 865 GLU A 866 -1 O ILE A 865 N ALA A 856 SHEET 1 AA4 6 GLN B 368 ILE B 378 0 SHEET 2 AA4 6 PHE B 381 TYR B 385 -1 O PHE B 381 N ILE B 378 SHEET 3 AA4 6 VAL B 394 GLN B 397 -1 O LEU B 396 N ALA B 382 SHEET 4 AA4 6 HIS B 437 LYS B 442 1 O ALA B 439 N LEU B 395 SHEET 5 AA4 6 VAL B 413 PRO B 420 -1 N ASP B 417 O VAL B 440 SHEET 6 AA4 6 GLN B 368 ILE B 378 -1 N ALA B 370 O PHE B 416 SHEET 1 AA5 4 VAL B 460 PHE B 463 0 SHEET 2 AA5 4 VAL B 466 ILE B 473 -1 O GLU B 468 N ARG B 461 SHEET 3 AA5 4 PHE B 527 ILE B 539 -1 O LEU B 529 N ILE B 473 SHEET 4 AA5 4 VAL B 542 HIS B 545 -1 O HIS B 545 N VAL B 534 SHEET 1 AA6 5 VAL B 460 PHE B 463 0 SHEET 2 AA6 5 VAL B 466 ILE B 473 -1 O GLU B 468 N ARG B 461 SHEET 3 AA6 5 PHE B 527 ILE B 539 -1 O LEU B 529 N ILE B 473 SHEET 4 AA6 5 ALA B 552 PHE B 556 -1 O GLN B 555 N ASP B 528 SHEET 5 AA6 5 ILE B 561 GLU B 563 -1 O ARG B 562 N GLN B 554 SHEET 1 AA7 3 VAL B 482 HIS B 486 0 SHEET 2 AA7 3 HIS B 496 LYS B 501 -1 O TYR B 499 N GLU B 483 SHEET 3 AA7 3 LEU B 507 PRO B 511 -1 O VAL B 508 N LEU B 500 LINK SG CYS A 768 ZN ZN A 901 1555 1555 2.33 LINK SG CYS A 771 ZN ZN A 901 1555 1555 2.33 LINK SG CYS A 887 ZN ZN A 901 1555 1555 2.33 LINK SG CYS A 890 ZN ZN A 901 1555 1555 2.33 CRYST1 145.089 59.053 88.161 90.00 119.80 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006892 0.000000 0.003947 0.00000 SCALE2 0.000000 0.016934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013071 0.00000