HEADER SUGAR BINDING PROTEIN 11-AUG-23 8Q6B TITLE THE RSL-D32N - SULFONATO-CALIX[8]ARENE COMPLEX, I23 FORM, CITRATE PH TITLE 2 4.0, OBTAINED BY CROSS-SEEDING COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUCOSE-BINDING LECTIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PUTATIVE FUCOSE-BINDING LECTIN PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA SOLANACEARUM; SOURCE 3 ORGANISM_TAXID: 305; SOURCE 4 GENE: E7Z57_08365, HF909_06975, HXP36_18875, RSP795_21825, SOURCE 5 RSP822_19650, RUN39_V1_50103; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BIOMATERIALS, BETA-PROPELLER, CRYSTAL ENGINEERING, MOLECULAR GLUE, KEYWDS 2 SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.J.FLOOD,P.B.CROWLEY REVDAT 2 20-MAR-24 8Q6B 1 JRNL REVDAT 1 06-MAR-24 8Q6B 0 JRNL AUTH R.J.FLOOD,N.M.MOCKLER,A.THUREAU,M.MALINSKA,P.B.CROWLEY JRNL TITL SUPRAMOLECULAR SYNTHONS IN PROTEIN-LIGAND FRAMEWORKS. JRNL REF CRYST.GROWTH DES. V. 24 2149 2024 JRNL REFN ISSN 1528-7483 JRNL PMID 38463617 JRNL DOI 10.1021/ACS.CGD.3C01480 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.O.RAMBERG,S.ENGILBERGE,T.SKOREK,P.B.CROWLEY REMARK 1 TITL FACILE FABRICATION OF PROTEIN-MACROCYCLE FRAMEWORKS. REMARK 1 REF J AM CHEM SOC V. 143 1896 2021 REMARK 1 REFN ESSN 1520-5126 REMARK 1 PMID 33470808 REMARK 1 DOI 10.1107/S2052252519003622 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 68 352 2012 REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 36268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6500 - 3.5700 1.00 2761 151 0.1387 0.1369 REMARK 3 2 3.5600 - 2.8300 1.00 2678 141 0.1814 0.1912 REMARK 3 3 2.8300 - 2.4800 1.00 2650 134 0.2106 0.2020 REMARK 3 4 2.4700 - 2.2500 1.00 2679 144 0.1999 0.2180 REMARK 3 5 2.2500 - 2.0900 1.00 2605 147 0.2010 0.2096 REMARK 3 6 2.0900 - 1.9600 1.00 2687 130 0.1718 0.1828 REMARK 3 7 1.9600 - 1.8700 1.00 2620 125 0.1711 0.1713 REMARK 3 8 1.8700 - 1.7900 1.00 2614 171 0.1850 0.2053 REMARK 3 9 1.7900 - 1.7200 1.00 2610 160 0.1736 0.2154 REMARK 3 10 1.7200 - 1.6600 1.00 2611 152 0.1807 0.1897 REMARK 3 11 1.6600 - 1.6100 1.00 2661 108 0.1886 0.1820 REMARK 3 12 1.6100 - 1.5600 1.00 2618 138 0.2020 0.1927 REMARK 3 13 1.5600 - 1.5200 1.00 2613 160 0.2330 0.2598 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.125 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.038 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1055 REMARK 3 ANGLE : 0.764 1525 REMARK 3 CHIRALITY : 0.055 114 REMARK 3 PLANARITY : 0.005 361 REMARK 3 DIHEDRAL : 11.764 187 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Q6B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132668. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36271 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 45.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 34.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRI-SODIUM CITRATE PH 4.0, 1000 REMARK 280 MM AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 56.08000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 56.08000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 56.08000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 56.08000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 56.08000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 56.08000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 56.08000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 56.08000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 56.08000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 56.08000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 56.08000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 56.08000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 56.08000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 56.08000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 56.08000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 56.08000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 56.08000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 56.08000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 56.08000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 56.08000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 56.08000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 56.08000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 56.08000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 56.08000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 56.08000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 56.08000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 260 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 261 LIES ON A SPECIAL POSITION. REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASN A 90 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 1 N CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 34 67.87 -157.33 REMARK 500 ASN A 79 53.40 -153.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6Z5G RELATED DB: PDB REMARK 900 THE ORIGINAL RSL - SCLX8 CUBIC ASSEMBLY WHICH INSPIRED THIS WORK. DBREF1 8Q6B A 1 90 UNP A0A0S4TLR1_RALSL DBREF2 8Q6B A A0A0S4TLR1 2 91 SEQADV 8Q6B ASN A 32 UNP A0A0S4TLR ASP 33 ENGINEERED MUTATION SEQRES 1 A 90 SER SER VAL GLN THR ALA ALA THR SER TRP GLY THR VAL SEQRES 2 A 90 PRO SER ILE ARG VAL TYR THR ALA ASN ASN GLY LYS ILE SEQRES 3 A 90 THR GLU ARG CYS TRP ASN GLY LYS GLY TRP TYR THR GLY SEQRES 4 A 90 ALA PHE ASN GLU PRO GLY ASP ASN VAL SER VAL THR SER SEQRES 5 A 90 TRP LEU VAL GLY SER ALA ILE HIS ILE ARG VAL TYR ALA SEQRES 6 A 90 SER THR GLY THR THR THR THR GLU TRP CYS TRP ASP GLY SEQRES 7 A 90 ASN GLY TRP THR LYS GLY ALA TYR THR ALA THR ASN HET EVB A 101 96 HET BDF A 102 12 HET EVB A 103 96 HET EVB A 104 96 HET GOL A 105 6 HET BDF A 106 12 HET GOL A 107 6 HETNAM EVB SULFONATO-CALIX[8]ARENE HETNAM BDF BETA-D-FRUCTOPYRANOSE HETNAM GOL GLYCEROL HETSYN BDF BETA-D-FRUCTOSE; D-FRUCTOSE; FRUCTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 EVB 3(C56 H48 O32 S8) FORMUL 3 BDF 2(C6 H12 O6) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 9 HOH *65(H2 O) SHEET 1 AA1 4 GLN A 4 TRP A 10 0 SHEET 2 AA1 4 SER A 15 ASN A 22 -1 O ALA A 21 N GLN A 4 SHEET 3 AA1 4 LYS A 25 TRP A 31 -1 O LYS A 25 N ASN A 22 SHEET 4 AA1 4 TRP A 36 PRO A 44 -1 O GLU A 43 N ILE A 26 SHEET 1 AA2 4 ASN A 47 VAL A 55 0 SHEET 2 AA2 4 ALA A 58 THR A 67 -1 O ARG A 62 N THR A 51 SHEET 3 AA2 4 THR A 70 TRP A 76 -1 O THR A 72 N ALA A 65 SHEET 4 AA2 4 TRP A 81 LYS A 83 -1 O THR A 82 N CYS A 75 CISPEP 1 VAL A 13 PRO A 14 0 -5.95 CRYST1 112.160 112.160 112.160 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008916 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008916 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008916 0.00000 CONECT 690 691 711 CONECT 691 690 692 693 CONECT 692 691 709 748 CONECT 693 691 700 CONECT 694 705 712 CONECT 695 696 712 CONECT 696 695 697 758 CONECT 697 696 698 CONECT 698 697 699 718 CONECT 699 698 712 750 CONECT 700 693 701 716 CONECT 701 700 713 747 CONECT 702 703 707 CONECT 703 702 704 708 CONECT 704 703 705 749 CONECT 705 694 704 706 CONECT 706 705 707 CONECT 707 702 706 757 CONECT 708 703 709 CONECT 709 692 708 710 CONECT 710 709 711 CONECT 711 690 710 756 CONECT 712 694 695 699 CONECT 713 701 714 717 CONECT 714 713 715 CONECT 715 714 716 755 CONECT 716 700 715 CONECT 717 713 719 CONECT 718 698 725 CONECT 719 717 720 724 CONECT 720 719 721 746 CONECT 721 720 722 731 CONECT 722 721 723 CONECT 723 722 724 754 CONECT 724 719 723 CONECT 725 718 726 730 CONECT 726 725 727 CONECT 727 726 728 759 CONECT 728 727 729 CONECT 729 728 730 732 CONECT 730 725 729 751 CONECT 731 721 733 CONECT 732 729 739 CONECT 733 731 734 738 CONECT 734 733 735 745 CONECT 735 734 736 761 CONECT 736 735 737 CONECT 737 736 738 753 CONECT 738 733 737 CONECT 739 732 740 744 CONECT 740 739 741 CONECT 741 740 742 760 CONECT 742 741 743 CONECT 743 742 744 761 CONECT 744 739 743 752 CONECT 745 734 CONECT 746 720 CONECT 747 701 CONECT 748 692 CONECT 749 704 CONECT 750 699 CONECT 751 730 CONECT 752 744 CONECT 753 737 762 763 764 CONECT 754 723 765 766 767 CONECT 755 715 768 769 770 CONECT 756 711 771 772 773 CONECT 757 707 774 775 776 CONECT 758 696 777 778 779 CONECT 759 727 780 781 782 CONECT 760 741 783 784 785 CONECT 761 735 743 CONECT 762 753 CONECT 763 753 CONECT 764 753 CONECT 765 754 CONECT 766 754 CONECT 767 754 CONECT 768 755 CONECT 769 755 CONECT 770 755 CONECT 771 756 CONECT 772 756 CONECT 773 756 CONECT 774 757 CONECT 775 757 CONECT 776 757 CONECT 777 758 CONECT 778 758 CONECT 779 758 CONECT 780 759 CONECT 781 759 CONECT 782 759 CONECT 783 760 CONECT 784 760 CONECT 785 760 CONECT 786 787 792 CONECT 787 786 788 793 797 CONECT 788 787 789 794 CONECT 789 788 790 795 CONECT 790 789 791 796 CONECT 791 790 797 CONECT 792 786 CONECT 793 787 CONECT 794 788 CONECT 795 789 CONECT 796 790 CONECT 797 787 791 CONECT 798 799 819 CONECT 799 798 800 801 CONECT 800 799 817 856 CONECT 801 799 808 CONECT 802 813 820 CONECT 803 804 820 CONECT 804 803 805 866 CONECT 805 804 806 CONECT 806 805 807 826 CONECT 807 806 820 858 CONECT 808 801 809 824 CONECT 809 808 821 855 CONECT 810 811 815 CONECT 811 810 812 816 CONECT 812 811 813 857 CONECT 813 802 812 814 CONECT 814 813 815 CONECT 815 810 814 865 CONECT 816 811 817 CONECT 817 800 816 818 CONECT 818 817 819 CONECT 819 798 818 864 CONECT 820 802 803 807 CONECT 821 809 822 825 CONECT 822 821 823 CONECT 823 822 824 863 CONECT 824 808 823 CONECT 825 821 827 CONECT 826 806 833 CONECT 827 825 828 832 CONECT 828 827 829 854 CONECT 829 828 830 839 CONECT 830 829 831 CONECT 831 830 832 862 CONECT 832 827 831 CONECT 833 826 834 838 CONECT 834 833 835 CONECT 835 834 836 867 CONECT 836 835 837 CONECT 837 836 838 840 CONECT 838 833 837 859 CONECT 839 829 841 CONECT 840 837 847 CONECT 841 839 842 846 CONECT 842 841 843 853 CONECT 843 842 844 869 CONECT 844 843 845 CONECT 845 844 846 861 CONECT 846 841 845 CONECT 847 840 848 852 CONECT 848 847 849 CONECT 849 848 850 868 CONECT 850 849 851 CONECT 851 850 852 869 CONECT 852 847 851 860 CONECT 853 842 CONECT 854 828 CONECT 855 809 CONECT 856 800 CONECT 857 812 CONECT 858 807 CONECT 859 838 CONECT 860 852 CONECT 861 845 870 871 872 CONECT 862 831 873 874 875 CONECT 863 823 876 877 878 CONECT 864 819 879 880 881 CONECT 865 815 882 883 884 CONECT 866 804 885 886 887 CONECT 867 835 888 889 890 CONECT 868 849 891 892 893 CONECT 869 843 851 CONECT 870 861 CONECT 871 861 CONECT 872 861 CONECT 873 862 CONECT 874 862 CONECT 875 862 CONECT 876 863 CONECT 877 863 CONECT 878 863 CONECT 879 864 CONECT 880 864 CONECT 881 864 CONECT 882 865 CONECT 883 865 CONECT 884 865 CONECT 885 866 CONECT 886 866 CONECT 887 866 CONECT 888 867 CONECT 889 867 CONECT 890 867 CONECT 891 868 CONECT 892 868 CONECT 893 868 CONECT 894 895 915 CONECT 895 894 896 897 CONECT 896 895 913 952 CONECT 897 895 904 CONECT 898 909 916 CONECT 899 900 916 CONECT 900 899 901 962 CONECT 901 900 902 CONECT 902 901 903 922 CONECT 903 902 916 954 CONECT 904 897 905 920 CONECT 905 904 917 951 CONECT 906 907 911 CONECT 907 906 908 912 CONECT 908 907 909 953 CONECT 909 898 908 910 CONECT 910 909 911 CONECT 911 906 910 961 CONECT 912 907 913 CONECT 913 896 912 914 CONECT 914 913 915 CONECT 915 894 914 960 CONECT 916 898 899 903 CONECT 917 905 918 921 CONECT 918 917 919 CONECT 919 918 920 959 CONECT 920 904 919 CONECT 921 917 923 CONECT 922 902 929 CONECT 923 921 924 928 CONECT 924 923 925 950 CONECT 925 924 926 935 CONECT 926 925 927 CONECT 927 926 928 958 CONECT 928 923 927 CONECT 929 922 930 934 CONECT 930 929 931 CONECT 931 930 932 963 CONECT 932 931 933 CONECT 933 932 934 936 CONECT 934 929 933 955 CONECT 935 925 937 CONECT 936 933 943 CONECT 937 935 938 942 CONECT 938 937 939 949 CONECT 939 938 940 965 CONECT 940 939 941 CONECT 941 940 942 957 CONECT 942 937 941 CONECT 943 936 944 948 CONECT 944 943 945 CONECT 945 944 946 964 CONECT 946 945 947 CONECT 947 946 948 965 CONECT 948 943 947 956 CONECT 949 938 CONECT 950 924 CONECT 951 905 CONECT 952 896 CONECT 953 908 CONECT 954 903 CONECT 955 934 CONECT 956 948 CONECT 957 941 966 967 968 CONECT 958 927 969 970 971 CONECT 959 919 972 973 974 CONECT 960 915 975 976 977 CONECT 961 911 978 979 980 CONECT 962 900 981 982 983 CONECT 963 931 984 985 986 CONECT 964 945 987 988 989 CONECT 965 939 947 CONECT 966 957 CONECT 967 957 CONECT 968 957 CONECT 969 958 CONECT 970 958 CONECT 971 958 CONECT 972 959 CONECT 973 959 CONECT 974 959 CONECT 975 960 CONECT 976 960 CONECT 977 960 CONECT 978 961 CONECT 979 961 CONECT 980 961 CONECT 981 962 CONECT 982 962 CONECT 983 962 CONECT 984 963 CONECT 985 963 CONECT 986 963 CONECT 987 964 CONECT 988 964 CONECT 989 964 CONECT 990 991 992 CONECT 991 990 CONECT 992 990 993 994 CONECT 993 992 CONECT 994 992 995 CONECT 995 994 CONECT 996 997 1002 CONECT 997 996 998 1003 1007 CONECT 998 997 999 1004 CONECT 999 998 1000 1005 CONECT 1000 999 1001 1006 CONECT 1001 1000 1007 CONECT 1002 996 CONECT 1003 997 CONECT 1004 998 CONECT 1005 999 CONECT 1006 1000 CONECT 1007 997 1001 CONECT 1008 1009 1010 CONECT 1009 1008 CONECT 1010 1008 1011 1012 CONECT 1011 1010 CONECT 1012 1010 1013 CONECT 1013 1012 MASTER 357 0 7 0 8 0 0 6 1077 1 324 7 END