HEADER TRANSFERASE 11-AUG-23 8Q6H TITLE HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND TITLE 2 11) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLINOSITOL 4-KINASE BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PI4K-BETA,PI4KBETA,PTDINS 4-KINASE BETA,NPIK,PI4K92,PI4KIII; COMPND 5 EC: 2.7.1.67; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PI4KB, PIK4CB, PI4KB; SOURCE 6 EXPRESSION_SYSTEM: BACULOVIRUS EXPRESSION VECTOR PFASTBAC1-HM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 274590 KEYWDS LIPID KINASE, TRANSFERASE-SIGNALING PROTEIN COMPLEX, COVALENT KEYWDS 2 INHIBITOR., TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.O.SOMERS REVDAT 1 13-DEC-23 8Q6H 0 JRNL AUTH B.COSGROVE,E.K.GRANT,S.BERTRAND,K.D.DOWN,D.O.SOMERS, JRNL AUTH 2 J.P EVANS,N.C.O.TOMKINSON,M.D.BARKER JRNL TITL COVALENT TARGETING OF NON-CYSTEINE RESIDUES IN PI4KIII BETA. JRNL REF RSC CHEM BIOL V. 4 1111 2023 JRNL REFN ESSN 2633-0679 JRNL PMID 38033723 JRNL DOI 10.1039/D3CB00142C REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 64.1 REMARK 3 NUMBER OF REFLECTIONS : 19774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1016 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 154 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 6.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 7 REMARK 3 BIN FREE R VALUE : 0.1620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3099 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.291 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.225 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.022 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3244 ; 0.004 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3117 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4399 ; 1.111 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7174 ; 0.380 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 391 ; 6.004 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 21 ; 6.642 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 587 ;14.319 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 487 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3878 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 744 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1559 ; 5.256 ; 7.305 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1560 ; 5.255 ; 7.305 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1951 ; 7.369 ;14.002 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1952 ; 7.367 ;14.002 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1685 ; 6.731 ; 8.579 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1686 ; 6.729 ; 8.580 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2449 ; 9.602 ;16.175 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3753 ;11.284 ;43.820 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3711 ;11.302 ;42.340 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8Q6H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132674. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 10, 2022 REMARK 200 DATA SCALING SOFTWARE : AIMLESS V0.7.9, STARANISO REMARK 200 V2.3.92 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20831 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 57.303 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.46400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC 5.8.0405 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.41950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.51650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.92250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.51650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.41950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.92250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 290 REMARK 465 ARG A 291 REMARK 465 THR A 292 REMARK 465 ALA A 293 REMARK 465 SER A 294 REMARK 465 ASN A 295 REMARK 465 PRO A 296 REMARK 465 LYS A 297 REMARK 465 VAL A 298 REMARK 465 GLU A 299 REMARK 465 ASN A 300 REMARK 465 GLU A 301 REMARK 465 ASP A 302 REMARK 465 ASN A 494 REMARK 465 ARG A 495 REMARK 465 ILE A 496 REMARK 465 GLN A 497 REMARK 465 SER A 498 REMARK 465 THR A 499 REMARK 465 GLN A 500 REMARK 465 SER A 501 REMARK 465 VAL A 502 REMARK 465 GLU A 503 REMARK 465 THR A 504 REMARK 465 ALA A 505 REMARK 465 PHE A 506 REMARK 465 LYS A 507 REMARK 465 ARG A 508 REMARK 465 ASP A 509 REMARK 465 PRO A 510 REMARK 465 GLU A 511 REMARK 465 ASP A 512 REMARK 465 PRO A 513 REMARK 465 SER A 514 REMARK 465 ALA A 515 REMARK 465 VAL A 516 REMARK 465 ALA A 517 REMARK 465 LEU A 518 REMARK 465 LYS A 519 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 394 O HOH A 1001 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 303 CD GLU A 303 OE2 0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 367 106.02 -56.12 REMARK 500 PRO A 577 37.80 -76.90 REMARK 500 ILE A 588 -88.41 -90.71 REMARK 500 ASN A 600 32.81 -89.31 REMARK 500 ASP A 674 82.54 70.88 REMARK 500 PHE A 675 50.93 -93.93 REMARK 500 LEU A 679 -117.20 56.97 REMARK 500 SER A 680 35.97 -98.93 REMARK 500 HIS A 749 61.31 -163.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1249 DISTANCE = 5.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 587 O REMARK 620 2 ILE A 588 O 91.7 REMARK 620 3 GLN A 794 O 41.8 81.7 REMARK 620 4 THR A 797 O 42.7 79.5 2.2 REMARK 620 5 GLY A 799 O 40.3 81.8 1.5 3.0 REMARK 620 N 1 2 3 4 DBREF 8Q6H A 291 503 UNP Q9UBF8 PI4KB_HUMAN 291 415 DBREF1 8Q6H A 504 801 UNP A0A0B4J1S8_HUMAN DBREF2 8Q6H A A0A0B4J1S8 531 828 SEQADV 8Q6H GLY A 290 UNP Q9UBF8 EXPRESSION TAG SEQADV 8Q6H GLN A 497 UNP Q9UBF8 ARG 409 ENGINEERED MUTATION SEQADV 8Q6H GLN A 500 UNP Q9UBF8 ARG 412 ENGINEERED MUTATION SEQRES 1 A 424 GLY ARG THR ALA SER ASN PRO LYS VAL GLU ASN GLU ASP SEQRES 2 A 424 GLU PRO VAL ARG LEU ALA PRO GLU ARG GLU PHE ILE LYS SEQRES 3 A 424 SER LEU MET ALA ILE GLY LYS ARG LEU ALA THR LEU PRO SEQRES 4 A 424 THR LYS GLU GLN LYS THR GLN ARG LEU ILE SER GLU LEU SEQRES 5 A 424 SER LEU LEU ASN HIS LYS LEU PRO ALA ARG VAL TRP LEU SEQRES 6 A 424 PRO THR ALA GLY PHE ASP HIS HIS VAL VAL ARG VAL PRO SEQRES 7 A 424 HIS THR GLN ALA VAL VAL LEU ASN SER LYS ASP LYS ALA SEQRES 8 A 424 PRO TYR LEU ILE TYR VAL GLU VAL LEU GLU CYS GLU ASN SEQRES 9 A 424 PHE ASP THR THR SER VAL PRO ALA ARG ILE PRO GLU ASN SEQRES 10 A 424 ARG ILE GLN SER THR GLN SER VAL GLU THR ALA PHE LYS SEQRES 11 A 424 ARG ASP PRO GLU ASP PRO SER ALA VAL ALA LEU LYS GLU SEQRES 12 A 424 PRO TRP GLN GLU LYS VAL ARG ARG ILE ARG GLU GLY SER SEQRES 13 A 424 PRO TYR GLY HIS LEU PRO ASN TRP ARG LEU LEU SER VAL SEQRES 14 A 424 ILE VAL LYS CYS GLY ASP ASP LEU ARG GLN GLU LEU LEU SEQRES 15 A 424 ALA PHE GLN VAL LEU LYS GLN LEU GLN SER ILE TRP GLU SEQRES 16 A 424 GLN GLU ARG VAL PRO LEU TRP ILE LYS PRO TYR LYS ILE SEQRES 17 A 424 LEU VAL ILE SER ALA ASP SER GLY MET ILE GLU PRO VAL SEQRES 18 A 424 VAL ASN ALA VAL SER ILE HIS GLN VAL LYS LYS GLN SER SEQRES 19 A 424 GLN LEU SER LEU LEU ASP TYR PHE LEU GLN GLU HIS GLY SEQRES 20 A 424 SER TYR THR THR GLU ALA PHE LEU SER ALA GLN ARG ASN SEQRES 21 A 424 PHE VAL GLN SER CYS ALA GLY TYR CYS LEU VAL CYS TYR SEQRES 22 A 424 LEU LEU GLN VAL LYS ASP ARG HIS ASN GLY ASN ILE LEU SEQRES 23 A 424 LEU ASP ALA GLU GLY HIS ILE ILE HIS ILE ASP PHE GLY SEQRES 24 A 424 PHE ILE LEU SER SER SER PRO ARG ASN LEU GLY PHE GLU SEQRES 25 A 424 THR SER ALA PHE LYS LEU THR THR GLU PHE VAL ASP VAL SEQRES 26 A 424 MET GLY GLY LEU ASP GLY ASP MET PHE ASN TYR TYR LYS SEQRES 27 A 424 MET LEU MET LEU GLN GLY LEU ILE ALA ALA ARG LYS HIS SEQRES 28 A 424 MET ASP LYS VAL VAL GLN ILE VAL GLU ILE MET GLN GLN SEQRES 29 A 424 GLY SER GLN LEU PRO CYS PHE HIS GLY SER SER THR ILE SEQRES 30 A 424 ARG ASN LEU LYS GLU ARG PHE HIS MET SER MET THR GLU SEQRES 31 A 424 GLU GLN LEU GLN LEU LEU VAL GLU GLN MET VAL ASP GLY SEQRES 32 A 424 SER MET ARG SER ILE THR THR LYS LEU TYR ASP GLY PHE SEQRES 33 A 424 GLN TYR LEU THR ASN GLY ILE MET HET MG A 901 1 HET KI7 A 902 35 HET EDO A 903 4 HETNAM MG MAGNESIUM ION HETNAM KI7 3-(3-FLUOROSULFONYLOXY-4-METHOXY-PHENYL)-7-[(4- HETNAM 2 KI7 FLUOROSULFONYLOXYPHENYL)METHYLAMINO]-2,5-DIMETHYL- HETNAM 3 KI7 PYRAZOLO[1,5-A]PYRIMIDINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG MG 2+ FORMUL 3 KI7 C22 H20 F2 N4 O7 S2 FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *249(H2 O) HELIX 1 AA1 ARG A 306 ALA A 325 1 20 HELIX 2 AA2 THR A 329 ASN A 345 1 17 HELIX 3 AA3 HIS A 346 LEU A 348 5 3 HELIX 4 AA4 LEU A 354 GLY A 358 5 5 HELIX 5 AA5 PRO A 521 SER A 533 1 13 HELIX 6 AA6 LEU A 554 GLU A 574 1 21 HELIX 7 AA7 ILE A 604 GLN A 612 1 9 HELIX 8 AA8 SER A 614 HIS A 623 1 10 HELIX 9 AA9 THR A 628 GLN A 653 1 26 HELIX 10 AB1 THR A 696 MET A 703 1 8 HELIX 11 AB2 GLY A 708 HIS A 728 1 21 HELIX 12 AB3 HIS A 728 SER A 743 1 16 HELIX 13 AB4 SER A 751 ARG A 760 1 10 HELIX 14 AB5 THR A 766 MET A 782 1 17 HELIX 15 AB6 ILE A 785 ASP A 791 1 7 HELIX 16 AB7 GLY A 792 LEU A 796 5 5 SHEET 1 AA1 3 HIS A 361 ARG A 365 0 SHEET 2 AA1 3 TYR A 382 GLU A 390 -1 O GLU A 387 N ARG A 365 SHEET 3 AA1 3 VAL A 372 VAL A 373 -1 N VAL A 372 O LEU A 383 SHEET 1 AA2 5 HIS A 361 ARG A 365 0 SHEET 2 AA2 5 TYR A 382 GLU A 390 -1 O GLU A 387 N ARG A 365 SHEET 3 AA2 5 TRP A 541 LYS A 549 -1 O VAL A 548 N TYR A 382 SHEET 4 AA2 5 GLY A 593 ILE A 595 -1 O GLY A 593 N LYS A 549 SHEET 5 AA2 5 ILE A 585 VAL A 587 -1 N LEU A 586 O MET A 594 SHEET 1 AA3 3 ALA A 601 SER A 603 0 SHEET 2 AA3 3 ILE A 662 ASP A 665 -1 O LEU A 664 N VAL A 602 SHEET 3 AA3 3 ILE A 670 HIS A 672 -1 O ILE A 671 N LEU A 663 LINK OH TYR A 385 S1 KI7 A 902 1555 1555 1.63 LINK NZ LYS A 549 S KI7 A 902 1555 1555 1.59 LINK O VAL A 587 MG MG A 901 1555 2555 2.25 LINK O ILE A 588 MG MG A 901 1555 2555 2.45 LINK O GLN A 794 MG MG A 901 1555 1555 2.29 LINK O THR A 797 MG MG A 901 1555 1555 2.10 LINK O GLY A 799 MG MG A 901 1555 1555 2.24 CISPEP 1 LEU A 348 PRO A 349 0 -8.33 CISPEP 2 SER A 682 PRO A 683 0 -1.71 CRYST1 58.839 67.845 107.033 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016996 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009343 0.00000