HEADER REPLICATION 16-AUG-23 8Q7I TITLE PCNA FROM CHAETOMIUM THERMOPHILUM IN COMPLEX WITH FEN1 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLIFERATING CELL NUCLEAR ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PCNA; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: SOME RESIDUES TRUNCATED OR OMITTED FROM MODEL DUE TO COMPND 7 FLEXIBILITY; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: FLAP ENDONUCLEASE 1; COMPND 10 CHAIN: P; COMPND 11 SYNONYM: FEN-1,FLAP STRUCTURE-SPECIFIC ENDONUCLEASE 1; COMPND 12 EC: 3.1.-.-; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: SOME RESIDUES TRUNCATED OR OMITTED FROM MODEL DUE TO COMPND 15 FLEXIBILITY SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCHAETOIDES THERMOPHILA DSM 1495; SOURCE 3 ORGANISM_TAXID: 759272; SOURCE 4 STRAIN: DSM 1495; SOURCE 5 GENE: CTHT_0061010; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA-2 (PLYSS); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEHISTEV-CTPCNA; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: THERMOCHAETOIDES THERMOPHILA DSM 1495; SOURCE 14 ORGANISM_TAXID: 759272 KEYWDS DNA CLAMP, DNA REPLICATION, HOMOTRIMER, REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR M.S.ALPHEY,C.B.WOLFORD,S.A.MACNEILL REVDAT 2 24-JAN-24 8Q7I 1 JRNL REVDAT 1 13-DEC-23 8Q7I 0 JRNL AUTH M.S.ALPHEY,C.B.WOLFORD,S.A.MACNEILL JRNL TITL CANONICAL BINDING OF CHAETOMIUM THERMOPHILUM DNA POLYMERASE JRNL TITL 2 DELTA / ZETA SUBUNIT POLD3 AND FLAP ENDONUCLEASE FEN1 TO JRNL TITL 3 PCNA. JRNL REF FRONT MOL BIOSCI V. 10 20648 2023 JRNL REFN ESSN 2296-889X JRNL PMID 38223238 JRNL DOI 10.3389/FMOLB.2023.1320648 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0411 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1277 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1590 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.1660 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2049 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -0.83000 REMARK 3 B12 (A**2) : 0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.132 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.861 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2111 ; 0.005 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2024 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2868 ; 1.101 ; 1.633 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4677 ; 0.379 ; 1.564 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 279 ; 6.726 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 9 ; 5.349 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 380 ;14.096 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 346 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2453 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 439 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1086 ; 1.228 ; 1.525 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1086 ; 1.228 ; 1.525 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1357 ; 2.047 ; 2.723 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1358 ; 2.047 ; 2.726 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1025 ; 1.867 ; 1.763 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1026 ; 1.866 ; 1.765 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1506 ; 3.020 ; 3.144 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2322 ; 4.874 ;16.290 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2232 ; 4.532 ;15.100 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8Q7I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132736. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23349 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 21.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.18200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM TRIS-HCL PH8.0, 150MM NACL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 43.67700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 25.21693 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 71.44433 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 43.67700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 25.21693 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 71.44433 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 43.67700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 25.21693 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 71.44433 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 43.67700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 25.21693 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 71.44433 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 43.67700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 25.21693 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 71.44433 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 43.67700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 25.21693 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 71.44433 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.43386 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 142.88867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 50.43386 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 142.88867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 50.43386 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 142.88867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 50.43386 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 142.88867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 50.43386 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 142.88867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 50.43386 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 142.88867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -43.67700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -75.65078 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 43.67700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -75.65078 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 423 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY A 256 REMARK 465 ASP A 257 REMARK 465 ASP A 258 REMARK 465 GLU A 259 REMARK 465 GLY P 339 REMARK 465 ALA P 340 REMARK 465 PRO P 353 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 ASP A 122 CG OD1 OD2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 GLN A 172 CG CD OE1 NE2 REMARK 470 GLU A 198 CG CD OE1 OE2 REMARK 470 GLU A 232 CG CD OE1 OE2 REMARK 470 ILE A 255 CG1 CG2 CD1 REMARK 470 LYS P 350 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 58 77.68 -155.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 80 O REMARK 620 2 HOH A 496 O 88.7 REMARK 620 3 HOH A 517 O 83.1 95.0 REMARK 620 4 HOH A 547 O 94.4 84.2 177.4 REMARK 620 5 HOH A 582 O 95.5 172.9 79.9 101.2 REMARK 620 6 HOH A 673 O 173.7 86.5 93.2 89.2 88.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 401 O REMARK 620 2 HOH A 439 O 125.8 REMARK 620 3 HOH A 469 O 51.2 164.3 REMARK 620 4 HOH A 502 O 124.3 91.3 102.5 REMARK 620 5 HOH A 559 O 51.8 90.2 76.6 175.7 REMARK 620 6 HOH A 615 O 52.3 93.1 94.1 91.0 84.9 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8P9O RELATED DB: PDB REMARK 900 8P9O CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT PEPTIDE DBREF 8Q7I A 2 259 UNP G0SF70 PCNA_CHATD 2 259 DBREF 8Q7I P 339 353 UNP G0S2B5 G0S2B5_CHATD 339 353 SEQADV 8Q7I GLY A -2 UNP G0SF70 EXPRESSION TAG SEQADV 8Q7I ALA A -1 UNP G0SF70 EXPRESSION TAG SEQADV 8Q7I MET A 0 UNP G0SF70 EXPRESSION TAG SEQADV 8Q7I ALA A 1 UNP G0SF70 EXPRESSION TAG SEQRES 1 A 262 GLY ALA MET ALA LEU GLU ALA ARG LEU GLU GLN ALA SER SEQRES 2 A 262 ILE LEU LYS LYS VAL VAL ASP ALA ILE LYS ASP LEU VAL SEQRES 3 A 262 GLN ASP CYS ASN PHE ASP CYS ASN ASP SER GLY ILE ALA SEQRES 4 A 262 LEU GLN ALA MET ASP ASN SER HIS VAL ALA LEU VAL SER SEQRES 5 A 262 MET MET LEU LYS ALA GLU GLY PHE SER PRO TYR ARG CYS SEQRES 6 A 262 ASP ARG ASN ILE ALA LEU GLY VAL ASN LEU THR SER LEU SEQRES 7 A 262 THR LYS VAL LEU ARG ALA ALA GLN ASN GLU ASP ILE LEU SEQRES 8 A 262 THR LEU LYS ALA GLU ASP ALA PRO ASP VAL LEU ASN LEU SEQRES 9 A 262 VAL PHE GLU SER SER GLU THR ASP ARG ILE SER GLU TYR SEQRES 10 A 262 ASP LEU LYS LEU MET ASP ILE ASP GLN GLU HIS LEU GLY SEQRES 11 A 262 ILE PRO GLU THR GLU TYR ALA ALA THR ILE THR MET PRO SEQRES 12 A 262 SER ASN GLU PHE LYS ARG ILE THR THR ASP LEU MET ALA SEQRES 13 A 262 MET SER GLU SER VAL THR ILE GLU ALA ASN LYS ASP GLY SEQRES 14 A 262 VAL LYS PHE SER CYS GLN GLY ASP ILE GLY ASN GLY SER SEQRES 15 A 262 VAL THR LEU ARG GLN HIS THR ASN VAL GLU LYS PRO ASN SEQRES 16 A 262 GLU SER ILE GLU ILE GLU LEU SER GLU PRO VAL SER LEU SEQRES 17 A 262 THR PHE SER LEU LYS TYR LEU VAL ASN PHE CYS LYS ALA SEQRES 18 A 262 SER ALA LEU SER ASN THR VAL LYS ILE CYS LEU SER ASN SEQRES 19 A 262 GLU VAL PRO LEU LEU VAL GLU TYR SER LEU GLY GLY SER SEQRES 20 A 262 SER TYR LEU ARG PHE TYR LEU ALA PRO LYS ILE GLY ASP SEQRES 21 A 262 ASP GLU SEQRES 1 P 15 GLY ALA GLN GLN ALA ARG ILE GLU GLY PHE PHE LYS VAL SEQRES 2 P 15 ILE PRO HET NA A 301 1 HET NA A 302 1 HETNAM NA SODIUM ION FORMUL 3 NA 2(NA 1+) FORMUL 5 HOH *280(H2 O) HELIX 1 AA1 ALA A 9 LYS A 20 1 12 HELIX 2 AA2 GLU A 55 PHE A 57 5 3 HELIX 3 AA3 LEU A 72 ARG A 80 1 9 HELIX 4 AA4 SER A 141 ALA A 153 1 13 HELIX 5 AA5 LYS A 190 SER A 194 5 5 HELIX 6 AA6 LEU A 209 CYS A 216 1 8 HELIX 7 AA7 LYS A 217 SER A 222 5 6 HELIX 8 AA8 ILE P 345 PHE P 349 5 5 SHEET 1 AA1 5 TYR A 60 CYS A 62 0 SHEET 2 AA1 5 LEU A 2 LEU A 6 -1 N GLU A 3 O ARG A 61 SHEET 3 AA1 5 ILE A 87 ALA A 92 -1 O LEU A 88 N LEU A 6 SHEET 4 AA1 5 VAL A 98 GLU A 104 -1 O ASN A 100 N LYS A 91 SHEET 5 AA1 5 ILE A 111 LYS A 117 -1 O SER A 112 N PHE A 103 SHEET 1 AA2 9 ILE A 66 ASN A 71 0 SHEET 2 AA2 9 ASP A 25 ASN A 31 -1 N CYS A 30 O ILE A 66 SHEET 3 AA2 9 GLY A 34 MET A 40 -1 O ALA A 36 N ASP A 29 SHEET 4 AA2 9 ALA A 46 LYS A 53 -1 O VAL A 48 N ALA A 39 SHEET 5 AA2 9 TYR A 246 LEU A 251 -1 O ARG A 248 N SER A 49 SHEET 6 AA2 9 LEU A 235 SER A 240 -1 N TYR A 239 O LEU A 247 SHEET 7 AA2 9 THR A 224 LEU A 229 -1 N LYS A 226 O GLU A 238 SHEET 8 AA2 9 ALA A 135 PRO A 140 -1 N ILE A 137 O ILE A 227 SHEET 9 AA2 9 GLU A 196 LEU A 199 -1 O GLU A 198 N THR A 136 SHEET 1 AA3 2 LEU A 126 GLY A 127 0 SHEET 2 AA3 2 LYS P 350 VAL P 351 -1 O LYS P 350 N GLY A 127 SHEET 1 AA4 4 GLY A 176 LEU A 182 0 SHEET 2 AA4 4 GLY A 166 GLY A 173 -1 N PHE A 169 O VAL A 180 SHEET 3 AA4 4 SER A 157 ASN A 163 -1 N THR A 159 O SER A 170 SHEET 4 AA4 4 VAL A 203 SER A 208 -1 O LEU A 205 N ILE A 160 LINK O ARG A 80 NA NA A 301 1555 1555 2.40 LINK NA NA A 301 O HOH A 496 1555 1555 2.33 LINK NA NA A 301 O HOH A 517 1555 2445 2.42 LINK NA NA A 301 O HOH A 547 1555 1555 2.34 LINK NA NA A 301 O HOH A 582 1555 2445 2.46 LINK NA NA A 301 O HOH A 673 1555 1555 2.36 LINK NA NA A 302 O HOH A 401 1555 18444 2.77 LINK NA NA A 302 O HOH A 439 1555 3545 2.46 LINK NA NA A 302 O HOH A 469 1555 1555 2.59 LINK NA NA A 302 O HOH A 502 1555 18444 2.45 LINK NA NA A 302 O HOH A 559 1555 1555 2.65 LINK NA NA A 302 O HOH A 615 1555 18444 2.31 CISPEP 1 SER A 58 PRO A 59 0 -2.56 CRYST1 87.354 87.354 214.333 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011448 0.006609 0.000000 0.00000 SCALE2 0.000000 0.013219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004666 0.00000