HEADER PROTEIN FIBRIL 19-AUG-23 8Q96 TITLE P301S TAU FILAMENTS FROM THE BRAINS OF TG2541 TRANSGENIC MOUSE LINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM TAU-E OF MICROTUBULE-ASSOCIATED PROTEIN TAU; COMPND 3 CHAIN: A, D, G, J; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: UNKNOWN PROTEIN; COMPND 6 CHAIN: B, E, H, K; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: UNKNOWN PROTEIN; COMPND 9 CHAIN: C, F, I, L SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: TG2541; SOURCE 6 ORGAN: BRAIN; SOURCE 7 TISSUE: BRAINSTEM; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 STRAIN: TG2541; SOURCE 12 ORGAN: BRAIN; SOURCE 13 TISSUE: BRAINSTEM; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 16 ORGANISM_TAXID: 10090; SOURCE 17 STRAIN: TG2541; SOURCE 18 ORGAN: BRAIN; SOURCE 19 TISSUE: BRAINSTEM KEYWDS P301S TAU, FRONTOTEMPORAL DEMENTIA AND PARKINSONISM LINKED TO KEYWDS 2 CHROMOSOME 17, TRANSGENIC MICE, ELECTRON CRYO-MICROSCOPY, PROTEIN KEYWDS 3 FIBRIL EXPDTA ELECTRON MICROSCOPY AUTHOR M.SCHWEIGHAUSER,A.G.MURZIN,J.MACDONALD,I.LAVENIR,R.A.CROWTHER, AUTHOR 2 S.H.W.SCHERES,M.GOEDERT REVDAT 2 18-OCT-23 8Q96 1 JRNL REVDAT 1 11-OCT-23 8Q96 0 JRNL AUTH M.SCHWEIGHAUSER,A.G.MURZIN,J.MACDONALD,I.LAVENIR, JRNL AUTH 2 R.A.CROWTHER,S.H.W.SCHERES,M.GOEDERT JRNL TITL CRYO-EM STRUCTURES OF TAU FILAMENTS FROM THE BRAINS OF MICE JRNL TITL 2 TRANSGENIC FOR HUMAN MUTANT P301S TAU. JRNL REF ACTA NEUROPATHOL COMMUN V. 11 160 2023 JRNL REFN ESSN 2051-5960 JRNL PMID 37798679 JRNL DOI 10.1186/S40478-023-01658-Y REMARK 2 REMARK 2 RESOLUTION. 3.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, EPU, CTFFIND, SERVALCAT, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.090 REMARK 3 NUMBER OF PARTICLES : 22760 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8Q96 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132862. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : P301S TAU PROTEIN FILAMENT REMARK 245 (TG2541) REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : HUMAN P301S TAU FILAMENTS REMARK 245 EXTRACTED FROM THE BRAINS OF TRANSGENIC MOUSE LINE TG2541 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2400.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3420.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 12-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 12-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 298 -70.00 -89.62 REMARK 500 SER A 324 71.88 54.23 REMARK 500 UNK B 7 101.13 -162.46 REMARK 500 UNK B 9 89.97 -157.18 REMARK 500 UNK C 6 89.99 -151.34 REMARK 500 LYS D 298 -70.03 -89.62 REMARK 500 SER D 324 71.86 54.20 REMARK 500 UNK E 7 101.17 -162.48 REMARK 500 UNK E 9 89.99 -157.17 REMARK 500 UNK F 6 89.98 -151.32 REMARK 500 SER G 324 71.85 54.21 REMARK 500 UNK H 7 101.10 -162.47 REMARK 500 UNK H 9 89.96 -157.20 REMARK 500 UNK I 6 90.00 -151.36 REMARK 500 LYS J 298 -70.01 -89.60 REMARK 500 SER J 324 71.85 54.19 REMARK 500 UNK K 7 101.08 -162.48 REMARK 500 UNK K 9 89.95 -157.16 REMARK 500 UNK L 6 90.00 -151.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-18269 RELATED DB: EMDB REMARK 900 P301S TAU FILAMENTS FROM THE BRAINS OF TG2541 TRANSGENIC MOUSE LINE DBREF 8Q96 A 274 329 UNP P10637 TAU_MOUSE 183 238 DBREF 8Q96 B 1 12 PDB 8Q96 8Q96 1 12 DBREF 8Q96 C 1 10 PDB 8Q96 8Q96 1 10 DBREF 8Q96 D 274 329 UNP P10637 TAU_MOUSE 183 238 DBREF 8Q96 E 1 12 PDB 8Q96 8Q96 1 12 DBREF 8Q96 F 1 10 PDB 8Q96 8Q96 1 10 DBREF 8Q96 G 274 329 UNP P10637 TAU_MOUSE 183 238 DBREF 8Q96 H 1 12 PDB 8Q96 8Q96 1 12 DBREF 8Q96 I 1 10 PDB 8Q96 8Q96 1 10 DBREF 8Q96 J 274 329 UNP P10637 TAU_MOUSE 183 238 DBREF 8Q96 K 1 12 PDB 8Q96 8Q96 1 12 DBREF 8Q96 L 1 10 PDB 8Q96 8Q96 1 10 SEQADV 8Q96 SER A 301 UNP P10637 PRO 210 CONFLICT SEQADV 8Q96 SER D 301 UNP P10637 PRO 210 CONFLICT SEQADV 8Q96 SER G 301 UNP P10637 PRO 210 CONFLICT SEQADV 8Q96 SER J 301 UNP P10637 PRO 210 CONFLICT SEQRES 1 A 56 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 A 56 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 A 56 VAL SER GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 A 56 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 A 56 GLY ASN ILE HIS SEQRES 1 B 12 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 C 10 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 D 56 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 D 56 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 D 56 VAL SER GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 D 56 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 D 56 GLY ASN ILE HIS SEQRES 1 E 12 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 F 10 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 G 56 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 G 56 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 G 56 VAL SER GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 G 56 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 G 56 GLY ASN ILE HIS SEQRES 1 H 12 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 I 10 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 J 56 LYS VAL GLN ILE ILE ASN LYS LYS LEU ASP LEU SER ASN SEQRES 2 J 56 VAL GLN SER LYS CYS GLY SER LYS ASP ASN ILE LYS HIS SEQRES 3 J 56 VAL SER GLY GLY GLY SER VAL GLN ILE VAL TYR LYS PRO SEQRES 4 J 56 VAL ASP LEU SER LYS VAL THR SER LYS CYS GLY SER LEU SEQRES 5 J 56 GLY ASN ILE HIS SEQRES 1 K 12 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 1 L 10 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SHEET 1 AA1 4 VAL D 275 ASP D 283 0 SHEET 2 AA1 4 VAL J 275 ASP J 283 1 O ASP J 283 N LEU D 282 SHEET 3 AA1 4 VAL A 275 ASP A 283 1 N ASP A 283 O LEU J 282 SHEET 4 AA1 4 VAL G 275 ASP G 283 1 O ASP G 283 N LEU A 282 SHEET 1 AA2 4 ASN D 286 VAL D 287 0 SHEET 2 AA2 4 ASN J 286 VAL J 287 1 O VAL J 287 N ASN D 286 SHEET 3 AA2 4 ASN A 286 VAL A 287 1 N VAL A 287 O ASN J 286 SHEET 4 AA2 4 ASN G 286 VAL G 287 1 O VAL G 287 N ASN A 286 SHEET 1 AA3 4 GLY D 292 GLY D 302 0 SHEET 2 AA3 4 GLY J 292 GLY J 302 1 O HIS J 299 N LYS D 298 SHEET 3 AA3 4 GLY A 292 GLY A 302 1 N HIS A 299 O LYS J 298 SHEET 4 AA3 4 GLY G 292 GLY G 302 1 O HIS G 299 N LYS A 298 SHEET 1 AA4 4 VAL D 306 TYR D 310 0 SHEET 2 AA4 4 VAL J 306 TYR J 310 1 O VAL J 309 N TYR D 310 SHEET 3 AA4 4 VAL A 306 TYR A 310 1 N VAL A 309 O TYR J 310 SHEET 4 AA4 4 VAL G 306 TYR G 310 1 O VAL G 309 N TYR A 310 SHEET 1 AA5 4 VAL D 313 ASP D 314 0 SHEET 2 AA5 4 VAL J 313 ASP J 314 1 O ASP J 314 N VAL D 313 SHEET 3 AA5 4 VAL A 313 ASP A 314 1 N ASP A 314 O VAL J 313 SHEET 4 AA5 4 VAL G 313 ASP G 314 1 O ASP G 314 N VAL A 313 SHEET 1 AA6 4 LYS D 317 VAL D 318 0 SHEET 2 AA6 4 LYS J 317 VAL J 318 1 O VAL J 318 N LYS D 317 SHEET 3 AA6 4 LYS A 317 VAL A 318 1 N VAL A 318 O LYS J 317 SHEET 4 AA6 4 LYS G 317 VAL G 318 1 O VAL G 318 N LYS A 317 SHEET 1 AA7 4 GLY D 323 ASN D 327 0 SHEET 2 AA7 4 GLY J 323 ASN J 327 1 O SER J 324 N GLY D 323 SHEET 3 AA7 4 GLY A 323 ASN A 327 1 N SER A 324 O GLY J 323 SHEET 4 AA7 4 GLY G 323 ASN G 327 1 O SER G 324 N GLY A 323 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000