HEADER DE NOVO PROTEIN 22-AUG-23 8QAG TITLE X-RAY CRYSTAL STRUCTURE OF A DE NOVO DESIGNED SINGLE-CHAIN PARALLEL TITLE 2 COILED-COIL ALPHA-HELICAL BARREL WITH 6 INNER HELICES, SC-CC-6-95 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SC-CC-6-95; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COILED COIL, ALPHA-HELICAL BARREL, DE NOVO PROTEIN DESIGN, DE NOVO KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.PETRENAS,K.I.ALBANESE,D.N.WOOLFSON REVDAT 2 07-AUG-24 8QAG 1 JRNL REVDAT 1 03-JUL-24 8QAG 0 JRNL AUTH K.I.ALBANESE,R.PETRENAS,F.PIRRO,E.A.NAUDIN,U.BORUCU, JRNL AUTH 2 W.M.DAWSON,D.A.SCOTT,G.J.LEGGETT,O.D.WEINER,T.A.A.OLIVER, JRNL AUTH 3 D.N.WOOLFSON JRNL TITL RATIONALLY SEEDED COMPUTATIONAL PROTEIN DESIGN OF JRNL TITL 2 ɑ-HELICAL BARRELS. JRNL REF NAT.CHEM.BIOL. V. 20 991 2024 JRNL REFN ESSN 1552-4469 JRNL PMID 38902458 JRNL DOI 10.1038/S41589-024-01642-0 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.9800 - 4.7900 1.00 3102 153 0.2354 0.2689 REMARK 3 2 4.7900 - 3.8000 1.00 2936 156 0.1784 0.2227 REMARK 3 3 3.8000 - 3.3200 1.00 2860 163 0.2492 0.3006 REMARK 3 4 3.3200 - 3.0200 1.00 2903 134 0.2414 0.3236 REMARK 3 5 3.0200 - 2.8000 0.99 2816 162 0.2858 0.3373 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3896 REMARK 3 ANGLE : 0.654 5312 REMARK 3 CHIRALITY : 0.038 741 REMARK 3 PLANARITY : 0.004 659 REMARK 3 DIHEDRAL : 9.903 615 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID -1 THROUGH 309) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6102 -38.1193 -14.1478 REMARK 3 T TENSOR REMARK 3 T11: 0.4690 T22: 0.5094 REMARK 3 T33: 0.4811 T12: 0.0540 REMARK 3 T13: 0.0590 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 5.3711 L22: 2.6701 REMARK 3 L33: 5.0746 L12: -0.0444 REMARK 3 L13: 0.9536 L23: -0.4599 REMARK 3 S TENSOR REMARK 3 S11: -0.0897 S12: 0.5971 S13: -0.5373 REMARK 3 S21: -0.0937 S22: 0.0300 S23: 0.0031 REMARK 3 S31: 0.4239 S32: 0.6245 S33: 0.0972 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 3 THROUGH 308) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2605 -38.9947 -22.4684 REMARK 3 T TENSOR REMARK 3 T11: 0.7689 T22: 0.6068 REMARK 3 T33: 0.5876 T12: -0.1824 REMARK 3 T13: -0.1783 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 3.9933 L22: 3.8325 REMARK 3 L33: 8.7949 L12: -0.0131 REMARK 3 L13: -1.5571 L23: 3.5146 REMARK 3 S TENSOR REMARK 3 S11: 0.0932 S12: -0.0483 S13: 0.1776 REMARK 3 S21: 0.5233 S22: 0.4103 S23: -0.1093 REMARK 3 S31: 1.3350 S32: -0.7709 S33: -0.3095 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: WATERS AND ROTAMER OUTLIERS WERE FIXED REMARK 3 WITH COOT(0.8.9.2). REMARK 4 REMARK 4 8QAG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99990 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15396 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 57.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 49.90 REMARK 200 R MERGE (I) : 0.13870 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 50.60 REMARK 200 R MERGE FOR SHELL (I) : 0.69240 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 75% JCSG A6: 0.2 M LITHIUM SULFATE, REMARK 280 0.1 M PHOSPHATE-CITRATE PH 4.2, 20% PEG 1000. 25% STRUCTURE REMARK 280 SCREEN 1 & 2 A11: 0.2 M CALCIUM CHLORIDE DIHYDRATE, 0.1 M SODIUM REMARK 280 ACETATE, PH 4.6, 20% W/V 2-PROPANOL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.75900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.47500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.47500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.13850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.47500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.47500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.37950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.47500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.47500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 112.13850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.47500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.47500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.37950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 74.75900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLY A 56 REMARK 465 ASP A 57 REMARK 465 GLN A 226 REMARK 465 GLY A 227 REMARK 465 LYS A 310 REMARK 465 SER A 311 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 ILE B 2 REMARK 465 GLU B 53 REMARK 465 LYS B 54 REMARK 465 LYS B 55 REMARK 465 GLY B 56 REMARK 465 ASP B 57 REMARK 465 ARG B 58 REMARK 465 ILE B 59 REMARK 465 ALA B 60 REMARK 465 ALA B 64 REMARK 465 LYS B 100 REMARK 465 GLU B 108 REMARK 465 ALA B 109 REMARK 465 LYS B 110 REMARK 465 LYS B 111 REMARK 465 GLN B 112 REMARK 465 GLY B 113 REMARK 465 ASP B 114 REMARK 465 GLU B 115 REMARK 465 GLY B 227 REMARK 465 ALA B 309 REMARK 465 LYS B 310 REMARK 465 SER B 311 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -1 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 0 CG SD CE REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 LYS A 7 CE NZ REMARK 470 GLU A 11 CD OE1 OE2 REMARK 470 GLU A 14 CD OE1 OE2 REMARK 470 LYS A 32 CE NZ REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 LYS A 42 CD CE NZ REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 LYS A 44 CD CE NZ REMARK 470 LYS A 47 CD CE NZ REMARK 470 LEU A 48 CG CD1 CD2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 GLU A 51 CD OE1 OE2 REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 ARG A 58 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 85 CD CE NZ REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 LYS A 92 CE NZ REMARK 470 GLU A 94 CD OE1 OE2 REMARK 470 LYS A 97 CD CE NZ REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 GLU A 108 CD OE1 OE2 REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 GLN A 112 CD OE1 NE2 REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 GLU A 143 CG CD OE1 OE2 REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 LYS A 149 CD CE NZ REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 LYS A 161 CD CE NZ REMARK 470 ARG A 162 CD NE CZ NH1 NH2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 GLU A 167 CG CD OE1 OE2 REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 GLN A 169 CD OE1 NE2 REMARK 470 ASP A 171 CG OD1 OD2 REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LYS A 197 CD CE NZ REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 GLU A 204 CD OE1 OE2 REMARK 470 LYS A 207 CE NZ REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 LYS A 215 CD CE NZ REMARK 470 GLU A 221 CD OE1 OE2 REMARK 470 GLU A 222 CG CD OE1 OE2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 LYS A 225 CE NZ REMARK 470 ASN A 228 N CG OD1 ND2 REMARK 470 GLU A 229 CD OE1 OE2 REMARK 470 LYS A 232 CE NZ REMARK 470 LYS A 254 CD CE NZ REMARK 470 GLU A 256 CD OE1 OE2 REMARK 470 GLU A 257 CG CD OE1 OE2 REMARK 470 LYS A 263 NZ REMARK 470 GLU A 264 CG CD OE1 OE2 REMARK 470 GLU A 265 CD OE1 OE2 REMARK 470 GLU A 267 CD OE1 OE2 REMARK 470 LYS A 268 CD CE NZ REMARK 470 GLU A 271 CD OE1 OE2 REMARK 470 LYS A 275 CD CE NZ REMARK 470 LYS A 278 CD CE NZ REMARK 470 GLU A 279 CD OE1 OE2 REMARK 470 LYS A 281 CD CE NZ REMARK 470 GLU A 307 CG CD OE1 OE2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 LEU B 6 CG CD1 CD2 REMARK 470 LYS B 7 CG CD CE NZ REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 LYS B 18 CD CE NZ REMARK 470 LYS B 28 CG CD CE NZ REMARK 470 GLU B 29 CG CD OE1 OE2 REMARK 470 LYS B 32 CD CE NZ REMARK 470 GLU B 33 CG CD OE1 OE2 REMARK 470 LYS B 36 CG CD CE NZ REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 VAL B 41 CG1 CG2 REMARK 470 LYS B 42 CG CD CE NZ REMARK 470 LYS B 43 CG CD CE NZ REMARK 470 LYS B 44 CE NZ REMARK 470 GLU B 46 CG CD OE1 OE2 REMARK 470 LYS B 47 CG CD CE NZ REMARK 470 LEU B 48 CG CD1 CD2 REMARK 470 LYS B 49 CD CE NZ REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 GLU B 51 CG CD OE1 OE2 REMARK 470 LEU B 63 CG CD1 CD2 REMARK 470 LYS B 85 CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 LYS B 92 CG CD CE NZ REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 LEU B 96 CG CD1 CD2 REMARK 470 LYS B 97 NZ REMARK 470 VAL B 98 CG1 CG2 REMARK 470 GLU B 101 CD OE1 OE2 REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 TYR B 121 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 132 CG CD1 CD2 REMARK 470 GLU B 142 CG CD OE1 OE2 REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 LYS B 146 CG CD CE NZ REMARK 470 LYS B 147 CE NZ REMARK 470 LYS B 149 CD CE NZ REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 LYS B 154 CG CD CE NZ REMARK 470 LYS B 156 CD CE NZ REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 LYS B 161 CG CD CE NZ REMARK 470 ARG B 162 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 164 CD CE NZ REMARK 470 GLU B 165 CG CD OE1 OE2 REMARK 470 GLU B 167 CG CD OE1 OE2 REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 GLN B 169 CG CD OE1 NE2 REMARK 470 ASP B 171 CG OD1 OD2 REMARK 470 LYS B 175 CG CD CE NZ REMARK 470 LEU B 189 CG CD1 CD2 REMARK 470 LEU B 196 CG CD1 CD2 REMARK 470 LYS B 197 CD CE NZ REMARK 470 GLU B 199 CG CD OE1 OE2 REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 LEU B 201 CG CD1 CD2 REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 GLU B 204 CG CD OE1 OE2 REMARK 470 LYS B 207 CG CD CE NZ REMARK 470 GLU B 211 CG CD OE1 OE2 REMARK 470 LYS B 213 NZ REMARK 470 LYS B 214 CG CD CE NZ REMARK 470 LYS B 215 CD CE NZ REMARK 470 GLU B 221 CD OE1 OE2 REMARK 470 GLU B 222 CG CD OE1 OE2 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 LYS B 225 CG CD CE NZ REMARK 470 GLN B 226 OE1 NE2 REMARK 470 GLU B 229 CG CD OE1 OE2 REMARK 470 LYS B 232 CD CE NZ REMARK 470 LEU B 253 CG CD1 CD2 REMARK 470 LYS B 254 CG CD CE NZ REMARK 470 GLU B 256 CG CD OE1 OE2 REMARK 470 GLU B 257 CG CD OE1 OE2 REMARK 470 LEU B 258 CG CD1 CD2 REMARK 470 GLU B 260 CG CD OE1 OE2 REMARK 470 GLU B 261 CG CD OE1 OE2 REMARK 470 LYS B 263 CG CD CE NZ REMARK 470 GLU B 264 CG CD OE1 OE2 REMARK 470 GLU B 267 CG CD OE1 OE2 REMARK 470 LYS B 268 CG CD CE NZ REMARK 470 LYS B 270 CG CD CE NZ REMARK 470 GLU B 271 CG CD OE1 OE2 REMARK 470 GLU B 272 CG CD OE1 OE2 REMARK 470 GLU B 274 CD OE1 OE2 REMARK 470 LYS B 275 CG CD CE NZ REMARK 470 LYS B 278 CG CD CE NZ REMARK 470 GLU B 279 CG CD OE1 OE2 REMARK 470 LYS B 281 CG CD CE NZ REMARK 470 GLU B 282 CG CD OE1 OE2 REMARK 470 ASN B 285 CG OD1 ND2 REMARK 470 LYS B 289 CG CD CE NZ REMARK 470 LYS B 293 CG CD CE NZ REMARK 470 GLU B 307 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 54 6.92 -65.13 REMARK 500 GLN B 283 -42.33 -140.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 502 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH B 503 DISTANCE = 7.39 ANGSTROMS DBREF 8QAG A -3 311 PDB 8QAG 8QAG -3 311 DBREF 8QAG B -3 311 PDB 8QAG 8QAG -3 311 SEQRES 1 A 315 GLY SER HIS MET GLY ILE ALA GLU ALA LEU LYS LEU ILE SEQRES 2 A 315 ALA GLU ALA LEU GLU VAL ILE ALA LYS ALA LEU LEU ALA SEQRES 3 A 315 ILE ALA LEU GLY ASP LYS GLU LEU ALA LYS GLU ALA LEU SEQRES 4 A 315 LYS GLU ALA GLU GLU VAL LYS LYS LYS ALA GLU LYS LEU SEQRES 5 A 315 LYS LYS GLU ALA GLU LYS LYS GLY ASP ARG ILE ALA ALA SEQRES 6 A 315 ALA LEU ALA LEU ILE ALA ILE ALA LEU ALA VAL ILE ALA SEQRES 7 A 315 LEU ALA LEU VAL ALA ILE ALA LEU GLY ASP LYS GLU LEU SEQRES 8 A 315 ALA LYS LYS ALA LYS GLU GLU ALA LEU LYS VAL LEU LYS SEQRES 9 A 315 GLU ALA GLU LYS GLY TYR LYS GLU ALA LYS LYS GLN GLY SEQRES 10 A 315 ASP GLU ILE ALA ALA ALA LEU TYR LEU ILE ALA ILE ALA SEQRES 11 A 315 LEU ALA ALA ILE ALA LEU ALA LEU VAL ALA ILE ALA LEU SEQRES 12 A 315 GLY ASP GLU GLU LEU ALA LYS LYS ALA LYS GLU LEU ALA SEQRES 13 A 315 GLU LYS VAL LYS GLU GLU ALA GLU LYS ARG TYR LYS GLU SEQRES 14 A 315 ALA GLU LYS GLN GLY ASP GLU ILE ALA LYS ALA LEU TYR SEQRES 15 A 315 LEU ILE ALA ILE ALA LEU ALA ALA ILE ALA LEU ALA LEU SEQRES 16 A 315 VAL ALA ILE ALA LEU LYS ASP GLU LYS LEU ALA LYS GLU SEQRES 17 A 315 ALA LEU LYS LEU ALA LEU GLU VAL LYS LYS LYS SER GLU SEQRES 18 A 315 GLU GLU TYR GLU GLU ALA LYS LYS GLN GLY ASN GLU ILE SEQRES 19 A 315 ALA LYS ALA LEU TYR LEU ILE ALA ILE ALA LEU ALA ALA SEQRES 20 A 315 ILE ALA LEU ALA LEU VAL ALA ILE ALA LEU LYS ASP GLU SEQRES 21 A 315 GLU LEU ALA GLU GLU ALA LYS GLU GLU ALA GLU LYS VAL SEQRES 22 A 315 LYS GLU GLU ALA GLU LYS GLN ALA LYS GLU ALA LYS GLU SEQRES 23 A 315 GLN GLY ASN GLU ILE ALA LYS SER LEU TYR LYS ILE ALA SEQRES 24 A 315 ILE SER LEU ALA GLU ILE ALA LEU SER LEU ALA GLU ILE SEQRES 25 A 315 ALA LYS SER SEQRES 1 B 315 GLY SER HIS MET GLY ILE ALA GLU ALA LEU LYS LEU ILE SEQRES 2 B 315 ALA GLU ALA LEU GLU VAL ILE ALA LYS ALA LEU LEU ALA SEQRES 3 B 315 ILE ALA LEU GLY ASP LYS GLU LEU ALA LYS GLU ALA LEU SEQRES 4 B 315 LYS GLU ALA GLU GLU VAL LYS LYS LYS ALA GLU LYS LEU SEQRES 5 B 315 LYS LYS GLU ALA GLU LYS LYS GLY ASP ARG ILE ALA ALA SEQRES 6 B 315 ALA LEU ALA LEU ILE ALA ILE ALA LEU ALA VAL ILE ALA SEQRES 7 B 315 LEU ALA LEU VAL ALA ILE ALA LEU GLY ASP LYS GLU LEU SEQRES 8 B 315 ALA LYS LYS ALA LYS GLU GLU ALA LEU LYS VAL LEU LYS SEQRES 9 B 315 GLU ALA GLU LYS GLY TYR LYS GLU ALA LYS LYS GLN GLY SEQRES 10 B 315 ASP GLU ILE ALA ALA ALA LEU TYR LEU ILE ALA ILE ALA SEQRES 11 B 315 LEU ALA ALA ILE ALA LEU ALA LEU VAL ALA ILE ALA LEU SEQRES 12 B 315 GLY ASP GLU GLU LEU ALA LYS LYS ALA LYS GLU LEU ALA SEQRES 13 B 315 GLU LYS VAL LYS GLU GLU ALA GLU LYS ARG TYR LYS GLU SEQRES 14 B 315 ALA GLU LYS GLN GLY ASP GLU ILE ALA LYS ALA LEU TYR SEQRES 15 B 315 LEU ILE ALA ILE ALA LEU ALA ALA ILE ALA LEU ALA LEU SEQRES 16 B 315 VAL ALA ILE ALA LEU LYS ASP GLU LYS LEU ALA LYS GLU SEQRES 17 B 315 ALA LEU LYS LEU ALA LEU GLU VAL LYS LYS LYS SER GLU SEQRES 18 B 315 GLU GLU TYR GLU GLU ALA LYS LYS GLN GLY ASN GLU ILE SEQRES 19 B 315 ALA LYS ALA LEU TYR LEU ILE ALA ILE ALA LEU ALA ALA SEQRES 20 B 315 ILE ALA LEU ALA LEU VAL ALA ILE ALA LEU LYS ASP GLU SEQRES 21 B 315 GLU LEU ALA GLU GLU ALA LYS GLU GLU ALA GLU LYS VAL SEQRES 22 B 315 LYS GLU GLU ALA GLU LYS GLN ALA LYS GLU ALA LYS GLU SEQRES 23 B 315 GLN GLY ASN GLU ILE ALA LYS SER LEU TYR LYS ILE ALA SEQRES 24 B 315 ILE SER LEU ALA GLU ILE ALA LEU SER LEU ALA GLU ILE SEQRES 25 B 315 ALA LYS SER HET PEG A 501 7 HET PG4 A 502 13 HET PEG B 401 7 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 3 PEG 2(C4 H10 O3) FORMUL 4 PG4 C8 H18 O5 FORMUL 6 HOH *4(H2 O) HELIX 1 AA1 HIS A -1 GLY A 26 1 28 HELIX 2 AA2 ASP A 27 LYS A 54 1 28 HELIX 3 AA3 ILE A 59 GLY A 83 1 25 HELIX 4 AA4 ASP A 84 GLN A 112 1 29 HELIX 5 AA5 ASP A 114 GLY A 140 1 27 HELIX 6 AA6 ASP A 141 LYS A 168 1 28 HELIX 7 AA7 ASP A 171 LYS A 197 1 27 HELIX 8 AA8 ASP A 198 LYS A 225 1 28 HELIX 9 AA9 GLU A 229 LEU A 253 1 25 HELIX 10 AB1 ASP A 255 GLY A 284 1 30 HELIX 11 AB2 ASN A 285 ALA A 309 1 25 HELIX 12 AB3 GLU B 4 GLY B 26 1 23 HELIX 13 AB4 ASP B 27 ALA B 52 1 26 HELIX 14 AB5 ALA B 62 LEU B 63 5 2 HELIX 15 AB6 LEU B 65 LEU B 65 5 1 HELIX 16 AB7 ILE B 66 GLY B 83 1 18 HELIX 17 AB8 ASP B 84 LEU B 99 1 16 HELIX 18 AB9 ALA B 102 LYS B 107 1 6 HELIX 19 AC1 ALA B 117 GLY B 140 1 24 HELIX 20 AC2 ASP B 141 LYS B 168 1 28 HELIX 21 AC3 ASP B 171 LYS B 197 1 27 HELIX 22 AC4 ASP B 198 LYS B 224 1 27 HELIX 23 AC5 GLU B 229 LYS B 254 1 26 HELIX 24 AC6 ASP B 255 GLU B 282 1 28 HELIX 25 AC7 ASN B 285 ILE B 308 1 24 CRYST1 88.950 88.950 149.518 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011242 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011242 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006688 0.00000