HEADER ELECTRON TRANSPORT 25-AUG-23 8QBZ TITLE CRYSTAL STRUCTURE OF THE OUTER MEMBRANE DECAHEME CYTOCHROME MTRC TITLE 2 (E344BOC-LYS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR IRON OXIDE RESPIRATORY SYSTEM SURFACE COMPND 3 DECAHEME CYTOCHROME C COMPONENT MTRC; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS MR-1; SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 GENE: MTRC, SO_1778; SOURCE 5 EXPRESSION_SYSTEM: SHEWANELLA ONEIDENSIS MR-1; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 211586 KEYWDS BOC-LYS, CYTOCHROME, ELECTRON TRANSPORT., ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR M.J.EDWARDS,C.J.LOCKWOOD,K.WHITING,B.W.NASH,J.N.BUTT,T.A.CLARKE REVDAT 1 04-SEP-24 8QBZ 0 JRNL AUTH C.W.J.LOCKWOOD,B.W.NASH,S.E.NEWTON-PAYNE,J.H.VAN WONDEREN, JRNL AUTH 2 K.P.S.WHITING,A.CONNOLLY,A.L.SUTTON-COOK,A.CROOK,A.R.AITHAL, JRNL AUTH 3 M.J.EDWARDS,T.A.CLARKE,A.SACHDEVA,J.N.BUTT JRNL TITL GENETIC CODE EXPANSION IN SHEWANELLA ONEIDENSIS MR-1 ALLOWS JRNL TITL 2 SITE-SPECIFIC INCORPORATION OF BIOORTHOGONAL FUNCTIONAL JRNL TITL 3 GROUPS INTO A C -TYPE CYTOCHROME. JRNL REF ACS SYNTH BIOL 2024 JRNL REFN ESSN 2161-5063 JRNL PMID 39158169 JRNL DOI 10.1021/ACSSYNBIO.4C00248 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 55540 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2957 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3851 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 196 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4698 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 471 REMARK 3 SOLVENT ATOMS : 959 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.22000 REMARK 3 B22 (A**2) : -0.24000 REMARK 3 B33 (A**2) : 0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.150 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.508 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5444 ; 0.011 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 4801 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7492 ; 2.671 ; 1.804 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11061 ; 1.371 ; 1.673 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 639 ; 7.133 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;37.812 ;25.607 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 785 ;13.242 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.162 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 698 ; 0.147 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6273 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1175 ; 0.009 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2563 ; 1.284 ; 1.756 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2544 ; 1.271 ; 1.751 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3183 ; 2.002 ; 2.622 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3184 ; 2.002 ; 2.623 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2881 ; 1.614 ; 1.803 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2882 ; 1.614 ; 1.804 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4310 ; 2.583 ; 2.613 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7020 ; 6.074 ;22.346 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6634 ; 5.386 ;20.953 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8QBZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292133010. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7085 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58591 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 89.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.45100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 1.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG 6000, 0.1 M CACL2, 0.2 M REMARK 280 SODIUM ACETATE, PH 5.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.48350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.77250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.83200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.77250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.48350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.83200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -249.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 LYS A 4 REMARK 465 PHE A 5 REMARK 465 LYS A 6 REMARK 465 LEU A 7 REMARK 465 ASN A 8 REMARK 465 LEU A 9 REMARK 465 ILE A 10 REMARK 465 THR A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 LEU A 15 REMARK 465 ALA A 16 REMARK 465 ASN A 17 REMARK 465 THR A 18 REMARK 465 GLY A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 VAL A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 ASP A 25 REMARK 465 GLY A 26 REMARK 465 GLY A 27 REMARK 465 SER A 28 REMARK 465 ASP A 29 REMARK 465 GLY A 30 REMARK 465 ASN A 31 REMARK 465 ASN A 32 REMARK 465 GLY A 33 REMARK 465 ASN A 34 REMARK 465 ASP A 35 REMARK 465 GLY A 36 REMARK 465 SER A 37 REMARK 465 ASP A 38 REMARK 465 GLY A 39 REMARK 465 GLY A 40 REMARK 465 GLU A 41 REMARK 465 PRO A 42 REMARK 465 ALA A 43 REMARK 465 GLY A 44 REMARK 465 MET A 671 REMARK 465 SER A 672 REMARK 465 ALA A 673 REMARK 465 TRP A 674 REMARK 465 SER A 675 REMARK 465 HIS A 676 REMARK 465 PRO A 677 REMARK 465 GLN A 678 REMARK 465 PHE A 679 REMARK 465 GLU A 680 REMARK 465 LYS A 681 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 954 O HOH A 1596 1.71 REMARK 500 O HOH A 927 O HOH A 1611 1.73 REMARK 500 O HOH A 1437 O HOH A 1532 1.89 REMARK 500 O HOH A 1217 O HOH A 1681 1.94 REMARK 500 O HOH A 1327 O HOH A 1533 1.96 REMARK 500 O HOH A 1702 O HOH A 1771 1.97 REMARK 500 O HOH A 1367 O HOH A 1628 1.97 REMARK 500 O HOH A 1623 O HOH A 1648 1.98 REMARK 500 O HOH A 1588 O HOH A 1802 1.98 REMARK 500 O HOH A 998 O HOH A 1613 2.01 REMARK 500 O HOH A 1175 O HOH A 1276 2.04 REMARK 500 O HOH A 1405 O HOH A 1708 2.07 REMARK 500 O HOH A 1316 O HOH A 1706 2.07 REMARK 500 O HOH A 1011 O HOH A 1382 2.07 REMARK 500 O HOH A 1219 O HOH A 1799 2.08 REMARK 500 O HOH A 1166 O HOH A 1286 2.08 REMARK 500 O HOH A 1435 O HOH A 1673 2.10 REMARK 500 O HOH A 908 O HOH A 1755 2.10 REMARK 500 O HOH A 1401 O HOH A 1620 2.10 REMARK 500 O HOH A 976 O HOH A 1764 2.11 REMARK 500 OG SER A 182 O HOH A 901 2.11 REMARK 500 O HOH A 911 O HOH A 1429 2.11 REMARK 500 O HOH A 1031 O HOH A 1617 2.12 REMARK 500 OD1 ASN A 256 O HOH A 902 2.13 REMARK 500 O HOH A 1300 O HOH A 1496 2.13 REMARK 500 O ASP A 640 O HOH A 903 2.14 REMARK 500 O HOH A 1500 O HOH A 1594 2.15 REMARK 500 O2A HEC A 804 O HOH A 904 2.15 REMARK 500 O HOH A 1131 O HOH A 1669 2.15 REMARK 500 OD2 ASP A 242 O HOH A 905 2.15 REMARK 500 O HOH A 1620 O HOH A 1631 2.16 REMARK 500 O HOH A 1827 O HOH A 1830 2.16 REMARK 500 CGA HEC A 804 O HOH A 904 2.16 REMARK 500 O HOH A 1462 O HOH A 1683 2.16 REMARK 500 O HOH A 1060 O HOH A 1697 2.17 REMARK 500 O HOH A 1449 O HOH A 1452 2.17 REMARK 500 O HOH A 907 O HOH A 1661 2.18 REMARK 500 O HOH A 1504 O HOH A 1574 2.18 REMARK 500 O HOH A 1125 O HOH A 1540 2.19 REMARK 500 O HOH A 1131 O HOH A 1285 2.19 REMARK 500 O HOH A 1603 O HOH A 1625 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1536 O HOH A 1561 4445 2.18 REMARK 500 O HOH A 1537 O HOH A 1539 4545 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 263 CB - CA - C ANGL. DEV. = 12.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 197 -65.92 70.96 REMARK 500 GLN A 199 -47.02 74.11 REMARK 500 ILE A 276 75.63 -116.60 REMARK 500 ASN A 384 76.24 -172.97 REMARK 500 ASN A 428 57.11 -144.38 REMARK 500 THR A 501 158.50 70.40 REMARK 500 THR A 547 -141.36 -108.49 REMARK 500 LYS A 602 -4.46 79.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1858 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A1859 DISTANCE = 6.69 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 811 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 52 OD1 REMARK 620 2 ILE A 53 O 84.1 REMARK 620 3 GLU A 165 OE1 80.8 82.6 REMARK 620 4 GLU A 165 OE2 133.2 100.3 54.2 REMARK 620 5 HOH A1050 O 76.9 95.6 157.6 147.0 REMARK 620 6 HOH A1489 O 149.6 86.6 126.6 76.9 75.3 REMARK 620 7 HOH A1566 O 86.8 169.3 90.4 82.0 87.7 104.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 815 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 162 O REMARK 620 2 GLU A 202 OE1 98.7 REMARK 620 3 GLU A 202 OE2 86.2 53.2 REMARK 620 4 HOH A 987 O 78.4 62.9 110.4 REMARK 620 5 HOH A1502 O 91.7 129.1 78.3 166.0 REMARK 620 6 HOH A1627 O 173.0 85.7 100.8 99.0 89.7 REMARK 620 7 HOH A1631 O 86.5 148.9 157.8 88.5 81.0 87.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 801 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 190 NE2 REMARK 620 2 HEC A 801 NA 92.0 REMARK 620 3 HEC A 801 NB 87.0 90.0 REMARK 620 4 HEC A 801 NC 88.2 179.3 89.3 REMARK 620 5 HEC A 801 ND 90.9 89.8 177.8 90.8 REMARK 620 6 HIS A 233 NE2 176.4 84.9 91.2 95.0 91.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 802 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 198 NE2 REMARK 620 2 HEC A 802 NA 87.6 REMARK 620 3 HEC A 802 NB 86.8 89.6 REMARK 620 4 HEC A 802 NC 92.8 179.2 89.6 REMARK 620 5 HEC A 802 ND 92.9 91.1 179.2 89.7 REMARK 620 6 HIS A 210 NE2 176.9 89.9 95.0 89.8 85.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 803 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 230 NE2 REMARK 620 2 HEC A 803 NA 88.8 REMARK 620 3 HEC A 803 NB 88.8 90.7 REMARK 620 4 HEC A 803 NC 90.6 177.9 91.3 REMARK 620 5 HEC A 803 ND 93.0 88.9 178.1 89.1 REMARK 620 6 HIS A 261 NE2 178.7 92.5 91.1 88.1 87.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 812 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 231 O REMARK 620 2 ASN A 231 OD1 76.9 REMARK 620 3 ASN A 234 O 82.9 158.9 REMARK 620 4 LYS A 237 O 137.9 101.8 97.4 REMARK 620 5 HOH A1137 O 112.5 94.1 87.8 109.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 804 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 286 NE2 REMARK 620 2 HEC A 804 NA 93.3 REMARK 620 3 HEC A 804 NB 92.3 89.7 REMARK 620 4 HEC A 804 NC 89.1 177.5 89.5 REMARK 620 5 HEC A 804 ND 89.9 91.1 177.6 89.6 REMARK 620 6 HIS A 319 NE2 178.5 87.6 86.6 90.0 91.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 805 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 297 NE2 REMARK 620 2 HEC A 805 NA 90.1 REMARK 620 3 HEC A 805 NB 88.9 88.7 REMARK 620 4 HEC A 805 NC 93.7 176.1 90.4 REMARK 620 5 HEC A 805 ND 94.2 91.7 176.9 89.0 REMARK 620 6 HIS A 310 NE2 175.6 86.9 87.8 89.3 89.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 813 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 472 OD1 REMARK 620 2 ASP A 472 OD2 51.6 REMARK 620 3 GLN A 520 O 74.9 115.9 REMARK 620 4 HOH A1279 O 84.7 72.2 140.8 REMARK 620 5 HOH A1283 O 91.6 69.2 81.5 133.0 REMARK 620 6 HOH A1327 O 84.2 122.8 75.7 69.2 157.1 REMARK 620 7 HOH A1337 O 147.0 148.8 72.1 122.2 83.2 88.2 REMARK 620 8 HOH A1654 O 137.0 86.0 141.6 73.9 77.7 120.1 73.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 806 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 500 NE2 REMARK 620 2 HEC A 806 NA 92.5 REMARK 620 3 HEC A 806 NB 88.2 92.0 REMARK 620 4 HEC A 806 NC 84.5 177.0 88.5 REMARK 620 5 HEC A 806 ND 90.3 88.7 178.4 90.8 REMARK 620 6 HIS A 564 NE2 174.7 92.3 89.3 90.7 92.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 807 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 507 NE2 REMARK 620 2 HEC A 807 NA 89.9 REMARK 620 3 HEC A 807 NB 89.7 90.8 REMARK 620 4 HEC A 807 NC 89.8 179.7 89.0 REMARK 620 5 HEC A 807 ND 90.2 90.1 179.1 90.1 REMARK 620 6 HIS A 542 NE2 179.2 89.7 91.0 90.6 89.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 808 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 561 NE2 REMARK 620 2 HEC A 808 NA 92.9 REMARK 620 3 HEC A 808 NB 88.8 89.8 REMARK 620 4 HEC A 808 NC 88.1 179.0 90.2 REMARK 620 5 HEC A 808 ND 89.5 91.0 178.1 89.0 REMARK 620 6 HIS A 580 NE2 175.5 88.2 86.8 90.8 94.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 809 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 618 NE2 REMARK 620 2 HEC A 809 NA 93.5 REMARK 620 3 HEC A 809 NB 92.4 90.4 REMARK 620 4 HEC A 809 NC 87.8 178.5 90.3 REMARK 620 5 HEC A 809 ND 88.7 89.2 178.9 90.1 REMARK 620 6 HIS A 666 NE2 177.4 84.7 89.4 94.0 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 810 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 627 NE2 REMARK 620 2 HEC A 810 NA 87.4 REMARK 620 3 HEC A 810 NB 92.9 90.7 REMARK 620 4 HEC A 810 NC 94.6 178.0 89.4 REMARK 620 5 HEC A 810 ND 89.2 89.4 177.9 90.4 REMARK 620 6 HIS A 659 NE2 174.7 88.7 90.8 89.4 87.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 814 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 651 O REMARK 620 2 HOH A1222 O 69.6 REMARK 620 3 HOH A1357 O 72.8 127.7 REMARK 620 4 HOH A1655 O 90.9 92.2 123.6 REMARK 620 5 HOH A1676 O 95.3 75.0 73.7 162.7 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LM8 RELATED DB: PDB REMARK 900 WILD TYPE DBREF 8QBZ A 26 671 UNP Q8EG34 Q8EG34_SHEON 26 671 SEQADV 8QBZ MET A 3 UNP Q8EG34 INITIATING METHIONINE SEQADV 8QBZ LYS A 4 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ PHE A 5 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LYS A 6 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LEU A 7 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ASN A 8 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LEU A 9 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ILE A 10 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ THR A 11 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LEU A 12 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ALA A 13 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LEU A 14 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LEU A 15 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ALA A 16 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ASN A 17 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ THR A 18 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ GLY A 19 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LEU A 20 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ALA A 21 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ VAL A 22 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ALA A 23 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ALA A 24 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ASP A 25 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LBY A 344 UNP Q8EG34 GLU 344 ENGINEERED MUTATION SEQADV 8QBZ SER A 672 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ ALA A 673 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ TRP A 674 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ SER A 675 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ HIS A 676 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ PRO A 677 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ GLN A 678 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ PHE A 679 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ GLU A 680 UNP Q8EG34 EXPRESSION TAG SEQADV 8QBZ LYS A 681 UNP Q8EG34 EXPRESSION TAG SEQRES 1 A 679 MET LYS PHE LYS LEU ASN LEU ILE THR LEU ALA LEU LEU SEQRES 2 A 679 ALA ASN THR GLY LEU ALA VAL ALA ALA ASP GLY GLY SER SEQRES 3 A 679 ASP GLY ASN ASN GLY ASN ASP GLY SER ASP GLY GLY GLU SEQRES 4 A 679 PRO ALA GLY SER ILE GLN THR LEU ASN LEU ASP ILE THR SEQRES 5 A 679 LYS VAL SER TYR GLU ASN GLY ALA PRO MET VAL THR VAL SEQRES 6 A 679 PHE ALA THR ASN GLU ALA ASP MET PRO VAL ILE GLY LEU SEQRES 7 A 679 ALA ASN LEU GLU ILE LYS LYS ALA LEU GLN LEU ILE PRO SEQRES 8 A 679 GLU GLY ALA THR GLY PRO GLY ASN SER ALA ASN TRP GLN SEQRES 9 A 679 GLY LEU GLY SER SER LYS SER TYR VAL ASP ASN LYS ASN SEQRES 10 A 679 GLY SER TYR THR PHE LYS PHE ASP ALA PHE ASP SER ASN SEQRES 11 A 679 LYS VAL PHE ASN ALA GLN LEU THR GLN ARG PHE ASN VAL SEQRES 12 A 679 VAL SER ALA ALA GLY LYS LEU ALA ASP GLY THR THR VAL SEQRES 13 A 679 PRO VAL ALA GLU MET VAL GLU ASP PHE ASP GLY GLN GLY SEQRES 14 A 679 ASN ALA PRO GLN TYR THR LYS ASN ILE VAL SER HIS GLU SEQRES 15 A 679 VAL CYS ALA SER CYS HIS VAL GLU GLY GLU LYS ILE TYR SEQRES 16 A 679 HIS GLN ALA THR GLU VAL GLU THR CYS ILE SER CYS HIS SEQRES 17 A 679 THR GLN GLU PHE ALA ASP GLY ARG GLY LYS PRO HIS VAL SEQRES 18 A 679 ALA PHE SER HIS LEU ILE HIS ASN VAL HIS ASN ALA ASN SEQRES 19 A 679 LYS ALA TRP GLY LYS ASP ASN LYS ILE PRO THR VAL ALA SEQRES 20 A 679 GLN ASN ILE VAL GLN ASP ASN CYS GLN VAL CYS HIS VAL SEQRES 21 A 679 GLU SER ASP MET LEU THR GLU ALA LYS ASN TRP SER ARG SEQRES 22 A 679 ILE PRO THR MET GLU VAL CYS SER SER CYS HIS VAL ASP SEQRES 23 A 679 ILE ASP PHE ALA ALA GLY LYS GLY HIS SER GLN GLN LEU SEQRES 24 A 679 ASP ASN SER ASN CYS ILE ALA CYS HIS ASN SER ASP TRP SEQRES 25 A 679 THR ALA GLU LEU HIS THR ALA LYS THR THR ALA THR LYS SEQRES 26 A 679 ASN LEU ILE ASN GLN TYR GLY ILE GLU THR THR SER THR SEQRES 27 A 679 ILE ASN THR LBY THR LYS ALA ALA THR ILE SER VAL GLN SEQRES 28 A 679 VAL VAL ASP ALA ASN GLY THR ALA VAL ASP LEU LYS THR SEQRES 29 A 679 ILE LEU PRO LYS VAL GLN ARG LEU GLU ILE ILE THR ASN SEQRES 30 A 679 VAL GLY PRO ASN ASN ALA THR LEU GLY TYR SER GLY LYS SEQRES 31 A 679 ASP SER ILE PHE ALA ILE LYS ASN GLY ALA LEU ASP PRO SEQRES 32 A 679 LYS ALA THR ILE ASN ASP ALA GLY LYS LEU VAL TYR THR SEQRES 33 A 679 THR THR LYS ASP LEU LYS LEU GLY GLN ASN GLY ALA ASP SEQRES 34 A 679 SER ASP THR ALA PHE SER PHE VAL GLY TRP SER MET CYS SEQRES 35 A 679 SER SER GLU GLY LYS PHE VAL ASP CYS ALA ASP PRO ALA SEQRES 36 A 679 PHE ASP GLY VAL ASP VAL THR LYS TYR THR GLY MET LYS SEQRES 37 A 679 ALA ASP LEU ALA PHE ALA THR LEU SER GLY LYS ALA PRO SEQRES 38 A 679 SER THR ARG HIS VAL ASP SER VAL ASN MET THR ALA CYS SEQRES 39 A 679 ALA ASN CYS HIS THR ALA GLU PHE GLU ILE HIS LYS GLY SEQRES 40 A 679 LYS GLN HIS ALA GLY PHE VAL MET THR GLU GLN LEU SER SEQRES 41 A 679 HIS THR GLN ASP ALA ASN GLY LYS ALA ILE VAL GLY LEU SEQRES 42 A 679 ASP ALA CYS VAL THR CYS HIS THR PRO ASP GLY THR TYR SEQRES 43 A 679 SER PHE ALA ASN ARG GLY ALA LEU GLU LEU LYS LEU HIS SEQRES 44 A 679 LYS LYS HIS VAL GLU ASP ALA TYR GLY LEU ILE GLY GLY SEQRES 45 A 679 ASN CYS ALA SER CYS HIS SER ASP PHE ASN LEU GLU SER SEQRES 46 A 679 PHE LYS LYS LYS GLY ALA LEU ASN THR ALA ALA ALA ALA SEQRES 47 A 679 ASP LYS THR GLY LEU TYR SER THR PRO ILE THR ALA THR SEQRES 48 A 679 CYS THR THR CYS HIS THR VAL GLY SER GLN TYR MET VAL SEQRES 49 A 679 HIS THR LYS GLU THR LEU GLU SER PHE GLY ALA VAL VAL SEQRES 50 A 679 ASP GLY THR LYS ASP ASP ALA THR SER ALA ALA GLN SER SEQRES 51 A 679 GLU THR CYS PHE TYR CYS HIS THR PRO THR VAL ALA ASP SEQRES 52 A 679 HIS THR LYS VAL LYS MET SER ALA TRP SER HIS PRO GLN SEQRES 53 A 679 PHE GLU LYS HET LBY A 344 16 HET HEC A 801 43 HET HEC A 802 43 HET HEC A 803 43 HET HEC A 804 43 HET HEC A 805 43 HET HEC A 806 43 HET HEC A 807 43 HET HEC A 808 43 HET HEC A 809 43 HET HEC A 810 43 HET CA A 811 1 HET CA A 812 1 HET CA A 813 1 HET CA A 814 1 HET CA A 815 1 HET EDO A 816 4 HET EDO A 817 4 HET EDO A 818 4 HET EDO A 819 4 HET EDO A 820 4 HET EDO A 821 4 HET EDO A 822 4 HET EDO A 823 4 HET ACT A 824 4 HETNAM LBY N~6~-(TERT-BUTOXYCARBONYL)-L-LYSINE HETNAM HEC HEME C HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 LBY C11 H22 N2 O4 FORMUL 2 HEC 10(C34 H34 FE N4 O4) FORMUL 12 CA 5(CA 2+) FORMUL 17 EDO 8(C2 H6 O2) FORMUL 25 ACT C2 H3 O2 1- FORMUL 26 HOH *959(H2 O) HELIX 1 AA1 HIS A 183 SER A 188 1 6 HELIX 2 AA2 GLU A 202 HIS A 210 1 9 HELIX 3 AA3 THR A 211 ARG A 218 1 8 HELIX 4 AA4 GLY A 219 VAL A 223 5 5 HELIX 5 AA5 ALA A 224 VAL A 232 1 9 HELIX 6 AA6 PRO A 246 GLN A 254 1 9 HELIX 7 AA7 ASN A 256 CYS A 260 5 5 HELIX 8 AA8 LYS A 271 ILE A 276 1 6 HELIX 9 AA9 THR A 278 SER A 283 1 6 HELIX 10 AB1 ASN A 305 HIS A 310 1 6 HELIX 11 AB2 ASN A 311 ASN A 331 1 21 HELIX 12 AB3 ASP A 363 LEU A 368 1 6 HELIX 13 AB4 LEU A 387 LYS A 392 1 6 HELIX 14 AB5 GLY A 429 SER A 432 5 4 HELIX 15 AB6 ASP A 462 THR A 464 5 3 HELIX 16 AB7 ASN A 492 THR A 501 1 10 HELIX 17 AB8 THR A 518 SER A 522 5 5 HELIX 18 AB9 LEU A 535 CYS A 541 5 7 HELIX 19 AC1 ALA A 555 ALA A 568 1 14 HELIX 20 AC2 ASN A 575 CYS A 579 5 5 HELIX 21 AC3 ASN A 584 LYS A 591 5 8 HELIX 22 AC4 THR A 608 THR A 616 1 9 HELIX 23 AC5 THR A 628 PHE A 635 1 8 HELIX 24 AC6 THR A 642 ALA A 649 1 8 HELIX 25 AC7 THR A 654 HIS A 659 1 6 SHEET 1 AA1 4 ASN A 50 SER A 57 0 SHEET 2 AA1 4 MET A 64 THR A 70 -1 O THR A 70 N ASN A 50 SHEET 3 AA1 4 SER A 121 PHE A 124 -1 O PHE A 124 N VAL A 65 SHEET 4 AA1 4 TYR A 114 ASP A 116 -1 N VAL A 115 O THR A 123 SHEET 1 AA2 4 ASN A 104 SER A 111 0 SHEET 2 AA2 4 LEU A 83 ILE A 92 -1 N ALA A 88 O LEU A 108 SHEET 3 AA2 4 GLN A 141 SER A 147 -1 O ARG A 142 N LEU A 89 SHEET 4 AA2 4 ALA A 161 PHE A 167 -1 O PHE A 167 N GLN A 141 SHEET 1 AA3 2 GLY A 150 LYS A 151 0 SHEET 2 AA3 2 THR A 157 VAL A 158 -1 O VAL A 158 N GLY A 150 SHEET 1 AA4 3 TYR A 333 ILE A 341 0 SHEET 2 AA4 3 ALA A 348 ASP A 356 -1 O GLN A 353 N GLU A 336 SHEET 3 AA4 3 ALA A 361 VAL A 362 -1 O VAL A 362 N VAL A 354 SHEET 1 AA5 4 TYR A 333 ILE A 341 0 SHEET 2 AA5 4 ALA A 348 ASP A 356 -1 O GLN A 353 N GLU A 336 SHEET 3 AA5 4 LEU A 415 THR A 418 -1 O TYR A 417 N ILE A 350 SHEET 4 AA5 4 ALA A 407 ILE A 409 -1 N THR A 408 O VAL A 416 SHEET 1 AA6 5 ALA A 402 LEU A 403 0 SHEET 2 AA6 5 ASP A 393 LYS A 399 -1 N LYS A 399 O ALA A 402 SHEET 3 AA6 5 VAL A 371 VAL A 380 -1 N THR A 378 O ASP A 393 SHEET 4 AA6 5 THR A 434 SER A 446 -1 O PHE A 438 N ILE A 377 SHEET 5 AA6 5 TYR A 466 GLY A 468 -1 O THR A 467 N MET A 443 SHEET 1 AA7 3 LYS A 449 PHE A 450 0 SHEET 2 AA7 3 THR A 434 SER A 446 -1 N SER A 446 O LYS A 449 SHEET 3 AA7 3 ASP A 472 THR A 477 -1 O ASP A 472 N VAL A 439 SHEET 1 AA8 2 LEU A 594 ALA A 598 0 SHEET 2 AA8 2 GLY A 604 SER A 607 -1 O LEU A 605 N ALA A 597 SSBOND 1 CYS A 444 CYS A 453 1555 1555 2.12 LINK SG CYS A 186 CAB HEC A 801 1555 1555 1.79 LINK SG CYS A 189 CAC HEC A 801 1555 1555 1.78 LINK SG CYS A 206 CAB HEC A 802 1555 1555 1.73 LINK SG CYS A 209 CAC HEC A 802 1555 1555 1.87 LINK SG CYS A 257 CAB HEC A 803 1555 1555 1.79 LINK SG CYS A 260 CAC HEC A 803 1555 1555 1.72 LINK SG CYS A 282 CAB HEC A 804 1555 1555 1.77 LINK SG CYS A 285 CAC HEC A 804 1555 1555 1.81 LINK SG CYS A 306 CAB HEC A 805 1555 1555 1.74 LINK SG CYS A 309 CAC HEC A 805 1555 1555 1.80 LINK C THR A 343 N LBY A 344 1555 1555 1.35 LINK C LBY A 344 N THR A 345 1555 1555 1.34 LINK SG CYS A 496 CAB HEC A 806 1555 1555 1.72 LINK SG CYS A 499 CAC HEC A 806 1555 1555 1.81 LINK SG CYS A 538 CAB HEC A 807 1555 1555 1.76 LINK SG CYS A 541 CAC HEC A 807 1555 1555 1.79 LINK SG CYS A 576 CAB HEC A 808 1555 1555 1.75 LINK SG CYS A 579 CAC HEC A 808 1555 1555 1.81 LINK SG CYS A 614 CAB HEC A 809 1555 1555 1.74 LINK SG CYS A 617 CAC HEC A 809 1555 1555 1.83 LINK SG CYS A 655 CAB HEC A 810 1555 1555 1.76 LINK SG CYS A 658 CAC HEC A 810 1555 1555 1.80 LINK OD1 ASP A 52 CA CA A 811 1555 1555 2.35 LINK O ILE A 53 CA CA A 811 1555 1555 2.29 LINK O GLU A 162 CA CA A 815 1555 1555 2.42 LINK OE1 GLU A 165 CA CA A 811 1555 1555 2.47 LINK OE2 GLU A 165 CA CA A 811 1555 1555 2.43 LINK NE2 HIS A 190 FE HEC A 801 1555 1555 2.01 LINK NE2 HIS A 198 FE HEC A 802 1555 1555 2.04 LINK OE1 GLU A 202 CA CA A 815 1555 1555 2.47 LINK OE2 GLU A 202 CA CA A 815 1555 1555 2.43 LINK NE2 HIS A 210 FE HEC A 802 1555 1555 1.99 LINK NE2 HIS A 230 FE HEC A 803 1555 1555 2.03 LINK O ASN A 231 CA CA A 812 1555 1555 2.32 LINK OD1 ASN A 231 CA CA A 812 1555 1555 2.39 LINK NE2 HIS A 233 FE HEC A 801 1555 1555 2.01 LINK O ASN A 234 CA CA A 812 1555 1555 2.32 LINK O LYS A 237 CA CA A 812 1555 1555 2.36 LINK NE2 HIS A 261 FE HEC A 803 1555 1555 2.02 LINK NE2 HIS A 286 FE HEC A 804 1555 1555 2.01 LINK NE2 HIS A 297 FE HEC A 805 1555 1555 2.04 LINK NE2 HIS A 310 FE HEC A 805 1555 1555 1.98 LINK NE2 HIS A 319 FE HEC A 804 1555 1555 2.03 LINK OD1 ASP A 472 CA CA A 813 1555 1555 2.35 LINK OD2 ASP A 472 CA CA A 813 1555 1555 2.61 LINK NE2 HIS A 500 FE HEC A 806 1555 1555 2.00 LINK NE2 HIS A 507 FE HEC A 807 1555 1555 2.01 LINK O GLN A 520 CA CA A 813 1555 1555 2.39 LINK NE2 HIS A 542 FE HEC A 807 1555 1555 2.02 LINK NE2 HIS A 561 FE HEC A 808 1555 1555 2.01 LINK NE2 HIS A 564 FE HEC A 806 1555 1555 2.00 LINK NE2 HIS A 580 FE HEC A 808 1555 1555 2.00 LINK NE2 HIS A 618 FE HEC A 809 1555 1555 2.02 LINK NE2 HIS A 627 FE HEC A 810 1555 1555 2.03 LINK O GLN A 651 CA CA A 814 1555 1555 2.40 LINK NE2 HIS A 659 FE HEC A 810 1555 1555 1.99 LINK NE2 HIS A 666 FE HEC A 809 1555 1555 2.03 LINK CA CA A 811 O HOH A1050 1555 1555 2.39 LINK CA CA A 811 O HOH A1489 1555 1555 2.40 LINK CA CA A 811 O HOH A1566 1555 1555 2.35 LINK CA CA A 812 O HOH A1137 1555 1555 2.36 LINK CA CA A 813 O HOH A1279 1555 1555 2.39 LINK CA CA A 813 O HOH A1283 1555 1555 2.39 LINK CA CA A 813 O HOH A1327 1555 1555 2.38 LINK CA CA A 813 O HOH A1337 1555 1555 2.37 LINK CA CA A 813 O HOH A1654 1555 1555 2.39 LINK CA CA A 814 O HOH A1222 1555 1555 2.38 LINK CA CA A 814 O HOH A1357 1555 1555 2.37 LINK CA CA A 814 O HOH A1655 1555 1555 2.40 LINK CA CA A 814 O HOH A1676 1555 1555 2.38 LINK CA CA A 815 O HOH A 987 1555 1555 2.40 LINK CA CA A 815 O HOH A1502 1555 1555 2.35 LINK CA CA A 815 O HOH A1627 1555 1555 2.36 LINK CA CA A 815 O HOH A1631 1555 1555 2.40 CRYST1 52.967 89.664 153.545 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018880 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011153 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006513 0.00000