data_8QF3 # _entry.id 8QF3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8QF3 pdb_00008qf3 10.2210/pdb8qf3/pdb WWPDB D_1292133152 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-03-13 2 'Structure model' 1 1 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_entry_details 2 2 'Structure model' pdbx_modification_feature # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8QF3 _pdbx_database_status.recvd_initial_deposition_date 2023-09-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email petri.kursula@gmail.com _pdbx_contact_author.name_first Petri _pdbx_contact_author.name_last Kursula _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-8529-3751 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Godoy Munoz, J.M.' 1 ? 'Kursula, P.' 2 0000-0001-8529-3751 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title '1.25-A structure of anti-Arc nanobody H11' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Godoy Munoz, J.M.' 1 ? primary 'Kursula, P.' 2 0000-0001-8529-3751 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nanobody H11' 14078.622 2 ? ? ? ? 2 water nat water 18.015 164 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSEVQLLESGGGLVQAGDSLRLSCAASGRTFSAYAMGWFRQAPGKEREFVAAISWSGNSTYYADSVKGRFTISRDNAKNT VYLQMNSLKPEDTAIYYCAARKPMYRVDISKGQNYDYWGQGTQVTVSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSEVQLLESGGGLVQAGDSLRLSCAASGRTFSAYAMGWFRQAPGKEREFVAAISWSGNSTYYADSVKGRFTISRDNAKNT VYLQMNSLKPEDTAIYYCAARKPMYRVDISKGQNYDYWGQGTQVTVSS ; _entity_poly.pdbx_strand_id E,A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLU n 1 4 VAL n 1 5 GLN n 1 6 LEU n 1 7 LEU n 1 8 GLU n 1 9 SER n 1 10 GLY n 1 11 GLY n 1 12 GLY n 1 13 LEU n 1 14 VAL n 1 15 GLN n 1 16 ALA n 1 17 GLY n 1 18 ASP n 1 19 SER n 1 20 LEU n 1 21 ARG n 1 22 LEU n 1 23 SER n 1 24 CYS n 1 25 ALA n 1 26 ALA n 1 27 SER n 1 28 GLY n 1 29 ARG n 1 30 THR n 1 31 PHE n 1 32 SER n 1 33 ALA n 1 34 TYR n 1 35 ALA n 1 36 MET n 1 37 GLY n 1 38 TRP n 1 39 PHE n 1 40 ARG n 1 41 GLN n 1 42 ALA n 1 43 PRO n 1 44 GLY n 1 45 LYS n 1 46 GLU n 1 47 ARG n 1 48 GLU n 1 49 PHE n 1 50 VAL n 1 51 ALA n 1 52 ALA n 1 53 ILE n 1 54 SER n 1 55 TRP n 1 56 SER n 1 57 GLY n 1 58 ASN n 1 59 SER n 1 60 THR n 1 61 TYR n 1 62 TYR n 1 63 ALA n 1 64 ASP n 1 65 SER n 1 66 VAL n 1 67 LYS n 1 68 GLY n 1 69 ARG n 1 70 PHE n 1 71 THR n 1 72 ILE n 1 73 SER n 1 74 ARG n 1 75 ASP n 1 76 ASN n 1 77 ALA n 1 78 LYS n 1 79 ASN n 1 80 THR n 1 81 VAL n 1 82 TYR n 1 83 LEU n 1 84 GLN n 1 85 MET n 1 86 ASN n 1 87 SER n 1 88 LEU n 1 89 LYS n 1 90 PRO n 1 91 GLU n 1 92 ASP n 1 93 THR n 1 94 ALA n 1 95 ILE n 1 96 TYR n 1 97 TYR n 1 98 CYS n 1 99 ALA n 1 100 ALA n 1 101 ARG n 1 102 LYS n 1 103 PRO n 1 104 MET n 1 105 TYR n 1 106 ARG n 1 107 VAL n 1 108 ASP n 1 109 ILE n 1 110 SER n 1 111 LYS n 1 112 GLY n 1 113 GLN n 1 114 ASN n 1 115 TYR n 1 116 ASP n 1 117 TYR n 1 118 TRP n 1 119 GLY n 1 120 GLN n 1 121 GLY n 1 122 THR n 1 123 GLN n 1 124 VAL n 1 125 THR n 1 126 VAL n 1 127 SER n 1 128 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 128 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vicugna pacos' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 30538 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? E . n A 1 2 SER 2 2 2 SER SER E . n A 1 3 GLU 3 3 3 GLU GLU E . n A 1 4 VAL 4 4 4 VAL VAL E . n A 1 5 GLN 5 5 5 GLN GLN E . n A 1 6 LEU 6 6 6 LEU LEU E . n A 1 7 LEU 7 7 7 LEU LEU E . n A 1 8 GLU 8 8 8 GLU GLU E . n A 1 9 SER 9 9 9 SER SER E . n A 1 10 GLY 10 10 10 GLY GLY E . n A 1 11 GLY 11 11 11 GLY GLY E . n A 1 12 GLY 12 12 12 GLY GLY E . n A 1 13 LEU 13 13 13 LEU LEU E . n A 1 14 VAL 14 14 14 VAL VAL E . n A 1 15 GLN 15 15 15 GLN GLN E . n A 1 16 ALA 16 16 16 ALA ALA E . n A 1 17 GLY 17 17 17 GLY GLY E . n A 1 18 ASP 18 18 18 ASP ASP E . n A 1 19 SER 19 19 19 SER SER E . n A 1 20 LEU 20 20 20 LEU LEU E . n A 1 21 ARG 21 21 21 ARG ARG E . n A 1 22 LEU 22 22 22 LEU LEU E . n A 1 23 SER 23 23 23 SER SER E . n A 1 24 CYS 24 24 24 CYS CYS E . n A 1 25 ALA 25 25 25 ALA ALA E . n A 1 26 ALA 26 26 26 ALA ALA E . n A 1 27 SER 27 27 27 SER SER E . n A 1 28 GLY 28 28 28 GLY GLY E . n A 1 29 ARG 29 29 29 ARG ARG E . n A 1 30 THR 30 30 30 THR THR E . n A 1 31 PHE 31 31 31 PHE PHE E . n A 1 32 SER 32 32 32 SER SER E . n A 1 33 ALA 33 33 33 ALA ALA E . n A 1 34 TYR 34 34 34 TYR TYR E . n A 1 35 ALA 35 35 35 ALA ALA E . n A 1 36 MET 36 36 36 MET MET E . n A 1 37 GLY 37 37 37 GLY GLY E . n A 1 38 TRP 38 38 38 TRP TRP E . n A 1 39 PHE 39 39 39 PHE PHE E . n A 1 40 ARG 40 40 40 ARG ARG E . n A 1 41 GLN 41 41 41 GLN GLN E . n A 1 42 ALA 42 42 42 ALA ALA E . n A 1 43 PRO 43 43 43 PRO PRO E . n A 1 44 GLY 44 44 44 GLY GLY E . n A 1 45 LYS 45 45 45 LYS LYS E . n A 1 46 GLU 46 46 46 GLU GLU E . n A 1 47 ARG 47 47 47 ARG ARG E . n A 1 48 GLU 48 48 48 GLU GLU E . n A 1 49 PHE 49 49 49 PHE PHE E . n A 1 50 VAL 50 50 50 VAL VAL E . n A 1 51 ALA 51 51 51 ALA ALA E . n A 1 52 ALA 52 52 52 ALA ALA E . n A 1 53 ILE 53 53 53 ILE ILE E . n A 1 54 SER 54 54 54 SER SER E . n A 1 55 TRP 55 55 55 TRP TRP E . n A 1 56 SER 56 56 56 SER SER E . n A 1 57 GLY 57 57 57 GLY GLY E . n A 1 58 ASN 58 58 58 ASN ASN E . n A 1 59 SER 59 59 59 SER SER E . n A 1 60 THR 60 60 60 THR THR E . n A 1 61 TYR 61 61 61 TYR TYR E . n A 1 62 TYR 62 62 62 TYR TYR E . n A 1 63 ALA 63 63 63 ALA ALA E . n A 1 64 ASP 64 64 64 ASP ASP E . n A 1 65 SER 65 65 65 SER SER E . n A 1 66 VAL 66 66 66 VAL VAL E . n A 1 67 LYS 67 67 67 LYS LYS E . n A 1 68 GLY 68 68 68 GLY GLY E . n A 1 69 ARG 69 69 69 ARG ARG E . n A 1 70 PHE 70 70 70 PHE PHE E . n A 1 71 THR 71 71 71 THR THR E . n A 1 72 ILE 72 72 72 ILE ILE E . n A 1 73 SER 73 73 73 SER SER E . n A 1 74 ARG 74 74 74 ARG ARG E . n A 1 75 ASP 75 75 75 ASP ASP E . n A 1 76 ASN 76 76 76 ASN ASN E . n A 1 77 ALA 77 77 77 ALA ALA E . n A 1 78 LYS 78 78 78 LYS LYS E . n A 1 79 ASN 79 79 79 ASN ASN E . n A 1 80 THR 80 80 80 THR THR E . n A 1 81 VAL 81 81 81 VAL VAL E . n A 1 82 TYR 82 82 82 TYR TYR E . n A 1 83 LEU 83 83 83 LEU LEU E . n A 1 84 GLN 84 84 84 GLN GLN E . n A 1 85 MET 85 85 85 MET MET E . n A 1 86 ASN 86 86 86 ASN ASN E . n A 1 87 SER 87 87 87 SER SER E . n A 1 88 LEU 88 88 88 LEU LEU E . n A 1 89 LYS 89 89 89 LYS LYS E . n A 1 90 PRO 90 90 90 PRO PRO E . n A 1 91 GLU 91 91 91 GLU GLU E . n A 1 92 ASP 92 92 92 ASP ASP E . n A 1 93 THR 93 93 93 THR THR E . n A 1 94 ALA 94 94 94 ALA ALA E . n A 1 95 ILE 95 95 95 ILE ILE E . n A 1 96 TYR 96 96 96 TYR TYR E . n A 1 97 TYR 97 97 97 TYR TYR E . n A 1 98 CYS 98 98 98 CYS CYS E . n A 1 99 ALA 99 99 99 ALA ALA E . n A 1 100 ALA 100 100 100 ALA ALA E . n A 1 101 ARG 101 101 101 ARG ARG E . n A 1 102 LYS 102 102 102 LYS LYS E . n A 1 103 PRO 103 103 103 PRO PRO E . n A 1 104 MET 104 104 104 MET MET E . n A 1 105 TYR 105 105 105 TYR TYR E . n A 1 106 ARG 106 106 106 ARG ARG E . n A 1 107 VAL 107 107 107 VAL VAL E . n A 1 108 ASP 108 108 108 ASP ASP E . n A 1 109 ILE 109 109 109 ILE ILE E . n A 1 110 SER 110 110 110 SER SER E . n A 1 111 LYS 111 111 111 LYS LYS E . n A 1 112 GLY 112 112 112 GLY GLY E . n A 1 113 GLN 113 113 113 GLN GLN E . n A 1 114 ASN 114 114 114 ASN ASN E . n A 1 115 TYR 115 115 115 TYR TYR E . n A 1 116 ASP 116 116 116 ASP ASP E . n A 1 117 TYR 117 117 117 TYR TYR E . n A 1 118 TRP 118 118 118 TRP TRP E . n A 1 119 GLY 119 119 119 GLY GLY E . n A 1 120 GLN 120 120 120 GLN GLN E . n A 1 121 GLY 121 121 121 GLY GLY E . n A 1 122 THR 122 122 122 THR THR E . n A 1 123 GLN 123 123 123 GLN GLN E . n A 1 124 VAL 124 124 124 VAL VAL E . n A 1 125 THR 125 125 125 THR THR E . n A 1 126 VAL 126 126 126 VAL VAL E . n A 1 127 SER 127 127 127 SER SER E . n A 1 128 SER 128 128 ? ? ? E . n B 1 1 GLY 1 1 ? ? ? A . n B 1 2 SER 2 2 2 SER SER A . n B 1 3 GLU 3 3 3 GLU GLU A . n B 1 4 VAL 4 4 4 VAL VAL A . n B 1 5 GLN 5 5 5 GLN GLN A . n B 1 6 LEU 6 6 6 LEU LEU A . n B 1 7 LEU 7 7 7 LEU LEU A . n B 1 8 GLU 8 8 8 GLU GLU A . n B 1 9 SER 9 9 9 SER SER A . n B 1 10 GLY 10 10 10 GLY GLY A . n B 1 11 GLY 11 11 11 GLY GLY A . n B 1 12 GLY 12 12 12 GLY GLY A . n B 1 13 LEU 13 13 13 LEU LEU A . n B 1 14 VAL 14 14 14 VAL VAL A . n B 1 15 GLN 15 15 15 GLN GLN A . n B 1 16 ALA 16 16 16 ALA ALA A . n B 1 17 GLY 17 17 17 GLY GLY A . n B 1 18 ASP 18 18 18 ASP ASP A . n B 1 19 SER 19 19 19 SER SER A . n B 1 20 LEU 20 20 20 LEU LEU A . n B 1 21 ARG 21 21 21 ARG ARG A . n B 1 22 LEU 22 22 22 LEU LEU A . n B 1 23 SER 23 23 23 SER SER A . n B 1 24 CYS 24 24 24 CYS CYS A . n B 1 25 ALA 25 25 25 ALA ALA A . n B 1 26 ALA 26 26 26 ALA ALA A . n B 1 27 SER 27 27 27 SER SER A . n B 1 28 GLY 28 28 28 GLY GLY A . n B 1 29 ARG 29 29 29 ARG ARG A . n B 1 30 THR 30 30 30 THR THR A . n B 1 31 PHE 31 31 31 PHE PHE A . n B 1 32 SER 32 32 32 SER SER A . n B 1 33 ALA 33 33 33 ALA ALA A . n B 1 34 TYR 34 34 34 TYR TYR A . n B 1 35 ALA 35 35 35 ALA ALA A . n B 1 36 MET 36 36 36 MET MET A . n B 1 37 GLY 37 37 37 GLY GLY A . n B 1 38 TRP 38 38 38 TRP TRP A . n B 1 39 PHE 39 39 39 PHE PHE A . n B 1 40 ARG 40 40 40 ARG ARG A . n B 1 41 GLN 41 41 41 GLN GLN A . n B 1 42 ALA 42 42 42 ALA ALA A . n B 1 43 PRO 43 43 43 PRO PRO A . n B 1 44 GLY 44 44 44 GLY GLY A . n B 1 45 LYS 45 45 45 LYS LYS A . n B 1 46 GLU 46 46 46 GLU GLU A . n B 1 47 ARG 47 47 47 ARG ARG A . n B 1 48 GLU 48 48 48 GLU GLU A . n B 1 49 PHE 49 49 49 PHE PHE A . n B 1 50 VAL 50 50 50 VAL VAL A . n B 1 51 ALA 51 51 51 ALA ALA A . n B 1 52 ALA 52 52 52 ALA ALA A . n B 1 53 ILE 53 53 53 ILE ILE A . n B 1 54 SER 54 54 54 SER SER A . n B 1 55 TRP 55 55 55 TRP TRP A . n B 1 56 SER 56 56 56 SER SER A . n B 1 57 GLY 57 57 57 GLY GLY A . n B 1 58 ASN 58 58 58 ASN ASN A . n B 1 59 SER 59 59 59 SER SER A . n B 1 60 THR 60 60 60 THR THR A . n B 1 61 TYR 61 61 61 TYR TYR A . n B 1 62 TYR 62 62 62 TYR TYR A . n B 1 63 ALA 63 63 63 ALA ALA A . n B 1 64 ASP 64 64 64 ASP ASP A . n B 1 65 SER 65 65 65 SER SER A . n B 1 66 VAL 66 66 66 VAL VAL A . n B 1 67 LYS 67 67 67 LYS LYS A . n B 1 68 GLY 68 68 68 GLY GLY A . n B 1 69 ARG 69 69 69 ARG ARG A . n B 1 70 PHE 70 70 70 PHE PHE A . n B 1 71 THR 71 71 71 THR THR A . n B 1 72 ILE 72 72 72 ILE ILE A . n B 1 73 SER 73 73 73 SER SER A . n B 1 74 ARG 74 74 74 ARG ARG A . n B 1 75 ASP 75 75 75 ASP ASP A . n B 1 76 ASN 76 76 76 ASN ASN A . n B 1 77 ALA 77 77 77 ALA ALA A . n B 1 78 LYS 78 78 78 LYS LYS A . n B 1 79 ASN 79 79 79 ASN ASN A . n B 1 80 THR 80 80 80 THR THR A . n B 1 81 VAL 81 81 81 VAL VAL A . n B 1 82 TYR 82 82 82 TYR TYR A . n B 1 83 LEU 83 83 83 LEU LEU A . n B 1 84 GLN 84 84 84 GLN GLN A . n B 1 85 MET 85 85 85 MET MET A . n B 1 86 ASN 86 86 86 ASN ASN A . n B 1 87 SER 87 87 87 SER SER A . n B 1 88 LEU 88 88 88 LEU LEU A . n B 1 89 LYS 89 89 89 LYS LYS A . n B 1 90 PRO 90 90 90 PRO PRO A . n B 1 91 GLU 91 91 91 GLU GLU A . n B 1 92 ASP 92 92 92 ASP ASP A . n B 1 93 THR 93 93 93 THR THR A . n B 1 94 ALA 94 94 94 ALA ALA A . n B 1 95 ILE 95 95 95 ILE ILE A . n B 1 96 TYR 96 96 96 TYR TYR A . n B 1 97 TYR 97 97 97 TYR TYR A . n B 1 98 CYS 98 98 98 CYS CYS A . n B 1 99 ALA 99 99 99 ALA ALA A . n B 1 100 ALA 100 100 100 ALA ALA A . n B 1 101 ARG 101 101 101 ARG ARG A . n B 1 102 LYS 102 102 102 LYS LYS A . n B 1 103 PRO 103 103 103 PRO PRO A . n B 1 104 MET 104 104 104 MET MET A . n B 1 105 TYR 105 105 105 TYR TYR A . n B 1 106 ARG 106 106 106 ARG ARG A . n B 1 107 VAL 107 107 107 VAL VAL A . n B 1 108 ASP 108 108 108 ASP ASP A . n B 1 109 ILE 109 109 109 ILE ILE A . n B 1 110 SER 110 110 110 SER SER A . n B 1 111 LYS 111 111 111 LYS LYS A . n B 1 112 GLY 112 112 112 GLY GLY A . n B 1 113 GLN 113 113 113 GLN GLN A . n B 1 114 ASN 114 114 114 ASN ASN A . n B 1 115 TYR 115 115 115 TYR TYR A . n B 1 116 ASP 116 116 116 ASP ASP A . n B 1 117 TYR 117 117 117 TYR TYR A . n B 1 118 TRP 118 118 118 TRP TRP A . n B 1 119 GLY 119 119 119 GLY GLY A . n B 1 120 GLN 120 120 120 GLN GLN A . n B 1 121 GLY 121 121 121 GLY GLY A . n B 1 122 THR 122 122 122 THR THR A . n B 1 123 GLN 123 123 123 GLN GLN A . n B 1 124 VAL 124 124 124 VAL VAL A . n B 1 125 THR 125 125 125 THR THR A . n B 1 126 VAL 126 126 126 VAL VAL A . n B 1 127 SER 127 127 127 SER SER A . n B 1 128 SER 128 128 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 70 HOH HOH E . C 2 HOH 2 202 49 HOH HOH E . C 2 HOH 3 203 38 HOH HOH E . C 2 HOH 4 204 73 HOH HOH E . C 2 HOH 5 205 66 HOH HOH E . C 2 HOH 6 206 162 HOH HOH E . C 2 HOH 7 207 149 HOH HOH E . C 2 HOH 8 208 129 HOH HOH E . C 2 HOH 9 209 83 HOH HOH E . C 2 HOH 10 210 112 HOH HOH E . C 2 HOH 11 211 76 HOH HOH E . C 2 HOH 12 212 68 HOH HOH E . C 2 HOH 13 213 17 HOH HOH E . C 2 HOH 14 214 81 HOH HOH E . C 2 HOH 15 215 26 HOH HOH E . C 2 HOH 16 216 86 HOH HOH E . C 2 HOH 17 217 84 HOH HOH E . C 2 HOH 18 218 163 HOH HOH E . C 2 HOH 19 219 115 HOH HOH E . C 2 HOH 20 220 53 HOH HOH E . C 2 HOH 21 221 39 HOH HOH E . C 2 HOH 22 222 87 HOH HOH E . C 2 HOH 23 223 20 HOH HOH E . C 2 HOH 24 224 143 HOH HOH E . C 2 HOH 25 225 157 HOH HOH E . C 2 HOH 26 226 140 HOH HOH E . C 2 HOH 27 227 105 HOH HOH E . C 2 HOH 28 228 156 HOH HOH E . C 2 HOH 29 229 56 HOH HOH E . C 2 HOH 30 230 63 HOH HOH E . C 2 HOH 31 231 85 HOH HOH E . C 2 HOH 32 232 71 HOH HOH E . C 2 HOH 33 233 18 HOH HOH E . C 2 HOH 34 234 48 HOH HOH E . C 2 HOH 35 235 110 HOH HOH E . C 2 HOH 36 236 12 HOH HOH E . C 2 HOH 37 237 45 HOH HOH E . C 2 HOH 38 238 6 HOH HOH E . C 2 HOH 39 239 25 HOH HOH E . C 2 HOH 40 240 77 HOH HOH E . C 2 HOH 41 241 44 HOH HOH E . C 2 HOH 42 242 58 HOH HOH E . C 2 HOH 43 243 158 HOH HOH E . C 2 HOH 44 244 125 HOH HOH E . C 2 HOH 45 245 34 HOH HOH E . C 2 HOH 46 246 61 HOH HOH E . C 2 HOH 47 247 78 HOH HOH E . C 2 HOH 48 248 122 HOH HOH E . C 2 HOH 49 249 47 HOH HOH E . C 2 HOH 50 250 15 HOH HOH E . C 2 HOH 51 251 14 HOH HOH E . C 2 HOH 52 252 142 HOH HOH E . C 2 HOH 53 253 5 HOH HOH E . C 2 HOH 54 254 74 HOH HOH E . C 2 HOH 55 255 65 HOH HOH E . C 2 HOH 56 256 93 HOH HOH E . C 2 HOH 57 257 80 HOH HOH E . C 2 HOH 58 258 82 HOH HOH E . C 2 HOH 59 259 52 HOH HOH E . C 2 HOH 60 260 123 HOH HOH E . C 2 HOH 61 261 46 HOH HOH E . C 2 HOH 62 262 1 HOH HOH E . C 2 HOH 63 263 54 HOH HOH E . C 2 HOH 64 264 104 HOH HOH E . C 2 HOH 65 265 100 HOH HOH E . C 2 HOH 66 266 144 HOH HOH E . C 2 HOH 67 267 94 HOH HOH E . C 2 HOH 68 268 130 HOH HOH E . C 2 HOH 69 269 55 HOH HOH E . C 2 HOH 70 270 91 HOH HOH E . C 2 HOH 71 271 164 HOH HOH E . C 2 HOH 72 272 170 HOH HOH E . C 2 HOH 73 273 98 HOH HOH E . C 2 HOH 74 274 171 HOH HOH E . C 2 HOH 75 275 101 HOH HOH E . C 2 HOH 76 276 92 HOH HOH E . C 2 HOH 77 277 99 HOH HOH E . C 2 HOH 78 278 166 HOH HOH E . C 2 HOH 79 279 120 HOH HOH E . C 2 HOH 80 280 107 HOH HOH E . C 2 HOH 81 281 24 HOH HOH E . D 2 HOH 1 201 42 HOH HOH A . D 2 HOH 2 202 50 HOH HOH A . D 2 HOH 3 203 145 HOH HOH A . D 2 HOH 4 204 97 HOH HOH A . D 2 HOH 5 205 111 HOH HOH A . D 2 HOH 6 206 95 HOH HOH A . D 2 HOH 7 207 31 HOH HOH A . D 2 HOH 8 208 89 HOH HOH A . D 2 HOH 9 209 29 HOH HOH A . D 2 HOH 10 210 109 HOH HOH A . D 2 HOH 11 211 51 HOH HOH A . D 2 HOH 12 212 62 HOH HOH A . D 2 HOH 13 213 131 HOH HOH A . D 2 HOH 14 214 60 HOH HOH A . D 2 HOH 15 215 43 HOH HOH A . D 2 HOH 16 216 23 HOH HOH A . D 2 HOH 17 217 116 HOH HOH A . D 2 HOH 18 218 90 HOH HOH A . D 2 HOH 19 219 32 HOH HOH A . D 2 HOH 20 220 121 HOH HOH A . D 2 HOH 21 221 103 HOH HOH A . D 2 HOH 22 222 102 HOH HOH A . D 2 HOH 23 223 108 HOH HOH A . D 2 HOH 24 224 19 HOH HOH A . D 2 HOH 25 225 2 HOH HOH A . D 2 HOH 26 226 11 HOH HOH A . D 2 HOH 27 227 41 HOH HOH A . D 2 HOH 28 228 8 HOH HOH A . D 2 HOH 29 229 141 HOH HOH A . D 2 HOH 30 230 21 HOH HOH A . D 2 HOH 31 231 127 HOH HOH A . D 2 HOH 32 232 118 HOH HOH A . D 2 HOH 33 233 147 HOH HOH A . D 2 HOH 34 234 36 HOH HOH A . D 2 HOH 35 235 79 HOH HOH A . D 2 HOH 36 236 7 HOH HOH A . D 2 HOH 37 237 106 HOH HOH A . D 2 HOH 38 238 13 HOH HOH A . D 2 HOH 39 239 3 HOH HOH A . D 2 HOH 40 240 30 HOH HOH A . D 2 HOH 41 241 117 HOH HOH A . D 2 HOH 42 242 40 HOH HOH A . D 2 HOH 43 243 151 HOH HOH A . D 2 HOH 44 244 128 HOH HOH A . D 2 HOH 45 245 67 HOH HOH A . D 2 HOH 46 246 4 HOH HOH A . D 2 HOH 47 247 88 HOH HOH A . D 2 HOH 48 248 37 HOH HOH A . D 2 HOH 49 249 33 HOH HOH A . D 2 HOH 50 250 114 HOH HOH A . D 2 HOH 51 251 35 HOH HOH A . D 2 HOH 52 252 59 HOH HOH A . D 2 HOH 53 253 154 HOH HOH A . D 2 HOH 54 254 22 HOH HOH A . D 2 HOH 55 255 28 HOH HOH A . D 2 HOH 56 256 27 HOH HOH A . D 2 HOH 57 257 72 HOH HOH A . D 2 HOH 58 258 150 HOH HOH A . D 2 HOH 59 259 9 HOH HOH A . D 2 HOH 60 260 126 HOH HOH A . D 2 HOH 61 261 148 HOH HOH A . D 2 HOH 62 262 16 HOH HOH A . D 2 HOH 63 263 137 HOH HOH A . D 2 HOH 64 264 10 HOH HOH A . D 2 HOH 65 265 96 HOH HOH A . D 2 HOH 66 266 75 HOH HOH A . D 2 HOH 67 267 152 HOH HOH A . D 2 HOH 68 268 119 HOH HOH A . D 2 HOH 69 269 113 HOH HOH A . D 2 HOH 70 270 167 HOH HOH A . D 2 HOH 71 271 160 HOH HOH A . D 2 HOH 72 272 173 HOH HOH A . D 2 HOH 73 273 169 HOH HOH A . D 2 HOH 74 274 172 HOH HOH A . D 2 HOH 75 275 139 HOH HOH A . D 2 HOH 76 276 134 HOH HOH A . D 2 HOH 77 277 153 HOH HOH A . D 2 HOH 78 278 146 HOH HOH A . D 2 HOH 79 279 64 HOH HOH A . D 2 HOH 80 280 69 HOH HOH A . D 2 HOH 81 281 168 HOH HOH A . D 2 HOH 82 282 124 HOH HOH A . D 2 HOH 83 283 57 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8QF3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.170 _cell.length_a_esd ? _cell.length_b 57.170 _cell.length_b_esd ? _cell.length_c 145.640 _cell.length_c_esd ? _cell.volume 476011.072 _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8QF3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8QF3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Bis-Tris (pH 5.5) and 25% w/v PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 281 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-11-11 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PETRA III, DESY BEAMLINE P11' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.03 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline P11 _diffrn_source.pdbx_synchrotron_site 'PETRA III, DESY' # _reflns.B_iso_Wilson_estimate 19.54 _reflns.entry_id 8QF3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.25 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 127672 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.075 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.25 _reflns_shell.d_res_low 1.29 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 12759 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 3.717 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.188 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.278 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 34.56 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8QF3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.25 _refine.ls_d_res_low 40.43 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 126003 _refine.ls_number_reflns_R_free 3757 _refine.ls_number_reflns_R_work 122246 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.69 _refine.ls_percent_reflns_R_free 2.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1865 _refine.ls_R_factor_R_free 0.2315 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1851 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 36.9101 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2158 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.25 _refine_hist.d_res_low 40.43 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 2122 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1958 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0182 ? 2007 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.7006 ? 2713 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.1114 ? 281 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0166 ? 352 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.3598 ? 721 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.25 1.27 . . 116 3654 78.77 . . . . 0.5028 . . . . . . . . . . . 0.4750 'X-RAY DIFFRACTION' 1.27 1.28 . . 123 4165 90.85 . . . . 0.5151 . . . . . . . . . . . 0.6056 'X-RAY DIFFRACTION' 1.28 1.30 . . 131 4451 97.30 . . . . 0.4902 . . . . . . . . . . . 0.4776 'X-RAY DIFFRACTION' 1.30 1.32 . . 134 4564 99.49 . . . . 0.4715 . . . . . . . . . . . 0.5542 'X-RAY DIFFRACTION' 1.32 1.34 . . 134 4582 99.79 . . . . 0.4517 . . . . . . . . . . . 0.4702 'X-RAY DIFFRACTION' 1.34 1.36 . . 142 4600 99.94 . . . . 0.4509 . . . . . . . . . . . 0.3956 'X-RAY DIFFRACTION' 1.36 1.38 . . 143 4541 99.91 . . . . 0.3902 . . . . . . . . . . . 0.3998 'X-RAY DIFFRACTION' 1.38 1.41 . . 144 4587 100.00 . . . . 0.3609 . . . . . . . . . . . 0.4388 'X-RAY DIFFRACTION' 1.41 1.43 . . 142 4601 99.96 . . . . 0.3361 . . . . . . . . . . . 0.3914 'X-RAY DIFFRACTION' 1.43 1.46 . . 140 4593 99.96 . . . . 0.3167 . . . . . . . . . . . 0.3807 'X-RAY DIFFRACTION' 1.46 1.49 . . 139 4575 100.00 . . . . 0.2828 . . . . . . . . . . . 0.3412 'X-RAY DIFFRACTION' 1.49 1.52 . . 145 4583 99.96 . . . . 0.2621 . . . . . . . . . . . 0.3322 'X-RAY DIFFRACTION' 1.52 1.56 . . 142 4593 100.00 . . . . 0.2493 . . . . . . . . . . . 0.3016 'X-RAY DIFFRACTION' 1.56 1.59 . . 137 4576 99.96 . . . . 0.2230 . . . . . . . . . . . 0.2985 'X-RAY DIFFRACTION' 1.59 1.64 . . 140 4611 99.96 . . . . 0.2032 . . . . . . . . . . . 0.2881 'X-RAY DIFFRACTION' 1.64 1.69 . . 140 4571 99.92 . . . . 0.2023 . . . . . . . . . . . 0.2594 'X-RAY DIFFRACTION' 1.69 1.74 . . 141 4574 100.00 . . . . 0.1889 . . . . . . . . . . . 0.2456 'X-RAY DIFFRACTION' 1.74 1.80 . . 142 4577 100.00 . . . . 0.1751 . . . . . . . . . . . 0.2538 'X-RAY DIFFRACTION' 1.80 1.87 . . 143 4596 100.00 . . . . 0.1686 . . . . . . . . . . . 0.2658 'X-RAY DIFFRACTION' 1.87 1.96 . . 145 4593 100.00 . . . . 0.1638 . . . . . . . . . . . 0.2411 'X-RAY DIFFRACTION' 1.96 2.06 . . 139 4577 99.89 . . . . 0.1563 . . . . . . . . . . . 0.2298 'X-RAY DIFFRACTION' 2.06 2.19 . . 137 4606 99.96 . . . . 0.1628 . . . . . . . . . . . 0.2360 'X-RAY DIFFRACTION' 2.19 2.36 . . 144 4567 100.00 . . . . 0.1530 . . . . . . . . . . . 0.2214 'X-RAY DIFFRACTION' 2.36 2.60 . . 149 4584 99.98 . . . . 0.1859 . . . . . . . . . . . 0.1972 'X-RAY DIFFRACTION' 2.60 2.98 . . 140 4595 99.96 . . . . 0.1691 . . . . . . . . . . . 0.2537 'X-RAY DIFFRACTION' 2.98 3.75 . . 137 4558 99.68 . . . . 0.1542 . . . . . . . . . . . 0.1961 'X-RAY DIFFRACTION' 3.75 40.43 . . 148 4572 99.75 . . . . 0.1484 . . . . . . . . . . . 0.1642 # _struct.entry_id 8QF3 _struct.title '1.25-A structure of anti-Arc nanobody H11' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8QF3 _struct_keywords.text 'nanobody, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8QF3 _struct_ref.pdbx_db_accession 8QF3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8QF3 E 1 ? 128 ? 8QF3 1 ? 128 ? 1 128 2 1 8QF3 A 1 ? 128 ? 8QF3 1 ? 128 ? 1 128 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 30 ? TYR A 34 ? THR E 30 TYR E 34 5 ? 5 HELX_P HELX_P2 AA2 ASN A 76 ? LYS A 78 ? ASN E 76 LYS E 78 5 ? 3 HELX_P HELX_P3 AA3 LYS A 89 ? THR A 93 ? LYS E 89 THR E 93 5 ? 5 HELX_P HELX_P4 AA4 LYS A 111 ? TYR A 115 ? LYS E 111 TYR E 115 5 ? 5 HELX_P HELX_P5 AA5 THR B 30 ? TYR B 34 ? THR A 30 TYR A 34 5 ? 5 HELX_P HELX_P6 AA6 ASN B 76 ? LYS B 78 ? ASN A 76 LYS A 78 5 ? 3 HELX_P HELX_P7 AA7 LYS B 89 ? THR B 93 ? LYS A 89 THR A 93 5 ? 5 HELX_P HELX_P8 AA8 LYS B 111 ? TYR B 115 ? LYS A 111 TYR A 115 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 98 SG ? ? E CYS 24 E CYS 98 1_555 ? ? ? ? ? ? ? 2.347 ? ? disulf2 disulf ? ? B CYS 24 SG ? ? ? 1_555 B CYS 98 SG ? ? A CYS 24 A CYS 98 1_555 ? ? ? ? ? ? ? 2.326 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 24 ? CYS A 98 ? CYS E 24 ? 1_555 CYS E 98 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 24 ? CYS B 98 ? CYS A 24 ? 1_555 CYS A 98 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 12 ? AA3 ? 10 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA2 8 9 ? anti-parallel AA2 9 10 ? anti-parallel AA2 10 11 ? anti-parallel AA2 11 12 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA3 7 8 ? anti-parallel AA3 8 9 ? anti-parallel AA3 9 10 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 4 ? SER A 9 ? VAL E 4 SER E 9 AA1 2 LEU A 20 ? GLY A 28 ? LEU E 20 GLY E 28 AA1 3 THR A 80 ? MET A 85 ? THR E 80 MET E 85 AA1 4 PHE A 70 ? ASP A 75 ? PHE E 70 ASP E 75 AA2 1 GLY A 12 ? GLN A 15 ? GLY E 12 GLN E 15 AA2 2 THR A 122 ? SER A 127 ? THR E 122 SER E 127 AA2 3 ALA A 94 ? ARG A 101 ? ALA E 94 ARG E 101 AA2 4 ALA A 35 ? GLN A 41 ? ALA E 35 GLN E 41 AA2 5 GLU A 48 ? ILE A 53 ? GLU E 48 ILE E 53 AA2 6 SER A 59 ? TYR A 62 ? SER E 59 TYR E 62 AA2 7 SER B 59 ? TYR B 62 ? SER A 59 TYR A 62 AA2 8 GLU B 48 ? ILE B 53 ? GLU A 48 ILE A 53 AA2 9 ALA B 35 ? GLN B 41 ? ALA A 35 GLN A 41 AA2 10 ALA B 94 ? ARG B 101 ? ALA A 94 ARG A 101 AA2 11 THR B 122 ? SER B 127 ? THR A 122 SER A 127 AA2 12 LEU B 13 ? GLN B 15 ? LEU A 13 GLN A 15 AA3 1 TYR A 117 ? TRP A 118 ? TYR E 117 TRP E 118 AA3 2 ALA A 94 ? ARG A 101 ? ALA E 94 ARG E 101 AA3 3 ALA A 35 ? GLN A 41 ? ALA E 35 GLN E 41 AA3 4 GLU A 48 ? ILE A 53 ? GLU E 48 ILE E 53 AA3 5 SER A 59 ? TYR A 62 ? SER E 59 TYR E 62 AA3 6 SER B 59 ? TYR B 62 ? SER A 59 TYR A 62 AA3 7 GLU B 48 ? ILE B 53 ? GLU A 48 ILE A 53 AA3 8 ALA B 35 ? GLN B 41 ? ALA A 35 GLN A 41 AA3 9 ALA B 94 ? ARG B 101 ? ALA A 94 ARG A 101 AA3 10 TYR B 117 ? TRP B 118 ? TYR A 117 TRP A 118 AA4 1 GLN B 5 ? SER B 9 ? GLN A 5 SER A 9 AA4 2 LEU B 20 ? SER B 27 ? LEU A 20 SER A 27 AA4 3 THR B 80 ? MET B 85 ? THR A 80 MET A 85 AA4 4 PHE B 70 ? ASP B 75 ? PHE A 70 ASP A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 5 ? N GLN E 5 O SER A 27 ? O SER E 27 AA1 2 3 N LEU A 20 ? N LEU E 20 O MET A 85 ? O MET E 85 AA1 3 4 O GLN A 84 ? O GLN E 84 N THR A 71 ? N THR E 71 AA2 1 2 N VAL A 14 ? N VAL E 14 O THR A 125 ? O THR E 125 AA2 2 3 O VAL A 124 ? O VAL E 124 N ALA A 94 ? N ALA E 94 AA2 3 4 O TYR A 97 ? O TYR E 97 N PHE A 39 ? N PHE E 39 AA2 4 5 N ARG A 40 ? N ARG E 40 O GLU A 48 ? O GLU E 48 AA2 5 6 N ALA A 52 ? N ALA E 52 O TYR A 61 ? O TYR E 61 AA2 6 7 N THR A 60 ? N THR E 60 O THR B 60 ? O THR A 60 AA2 7 8 O TYR B 61 ? O TYR A 61 N ALA B 52 ? N ALA A 52 AA2 8 9 O ALA B 51 ? O ALA A 51 N TRP B 38 ? N TRP A 38 AA2 9 10 N PHE B 39 ? N PHE A 39 O TYR B 97 ? O TYR A 97 AA2 10 11 N ALA B 94 ? N ALA A 94 O VAL B 124 ? O VAL A 124 AA2 11 12 O THR B 125 ? O THR A 125 N VAL B 14 ? N VAL A 14 AA3 1 2 O TYR A 117 ? O TYR E 117 N ALA A 100 ? N ALA E 100 AA3 2 3 O TYR A 97 ? O TYR E 97 N PHE A 39 ? N PHE E 39 AA3 3 4 N ARG A 40 ? N ARG E 40 O GLU A 48 ? O GLU E 48 AA3 4 5 N ALA A 52 ? N ALA E 52 O TYR A 61 ? O TYR E 61 AA3 5 6 N THR A 60 ? N THR E 60 O THR B 60 ? O THR A 60 AA3 6 7 O TYR B 61 ? O TYR A 61 N ALA B 52 ? N ALA A 52 AA3 7 8 O ALA B 51 ? O ALA A 51 N TRP B 38 ? N TRP A 38 AA3 8 9 N PHE B 39 ? N PHE A 39 O TYR B 97 ? O TYR A 97 AA3 9 10 N ALA B 100 ? N ALA A 100 O TYR B 117 ? O TYR A 117 AA4 1 2 N SER B 9 ? N SER A 9 O SER B 23 ? O SER A 23 AA4 2 3 N LEU B 20 ? N LEU A 20 O MET B 85 ? O MET A 85 AA4 3 4 O GLN B 84 ? O GLN A 84 N THR B 71 ? N THR A 71 # _pdbx_entry_details.entry_id 8QF3 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG E CYS 24 ? ? SG E CYS 98 ? ? 1.29 2 1 HH22 A ARG 47 ? ? O A HOH 201 ? ? 1.57 3 1 OD1 E ASN 58 ? ? O E HOH 201 ? ? 2.06 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE2 _pdbx_validate_symm_contact.auth_asym_id_1 E _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 91 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 E _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 206 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_545 _pdbx_validate_symm_contact.dist 1.87 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB E CYS 24 ? ? SG E CYS 24 ? ? 1.934 1.818 0.116 0.017 N 2 1 CB A CYS 98 ? ? SG A CYS 98 ? ? 1.944 1.818 0.126 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA E CYS 24 ? ? CB E CYS 24 ? ? SG E CYS 24 ? ? 130.62 114.20 16.42 1.10 N 2 1 CB E ASP 92 ? ? CG E ASP 92 ? ? OD1 E ASP 92 ? ? 123.95 118.30 5.65 0.90 N 3 1 CA E CYS 98 ? ? CB E CYS 98 ? ? SG E CYS 98 ? ? 125.23 114.20 11.03 1.10 N 4 1 CA A CYS 98 ? ? CB A CYS 98 ? ? SG A CYS 98 ? ? 134.15 114.20 19.95 1.10 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id E _pdbx_validate_torsion.auth_seq_id 50 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -107.57 _pdbx_validate_torsion.psi -60.10 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+3/4 3 y+1/2,-x+1/2,z+1/4 4 x+1/2,-y+1/2,-z+1/4 5 -x+1/2,y+1/2,-z+3/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 E GLY 1 ? A GLY 1 2 1 Y 1 E SER 128 ? A SER 128 3 1 Y 1 A GLY 1 ? B GLY 1 4 1 Y 1 A SER 128 ? B SER 128 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 TRP N N N N 300 TRP CA C N S 301 TRP C C N N 302 TRP O O N N 303 TRP CB C N N 304 TRP CG C Y N 305 TRP CD1 C Y N 306 TRP CD2 C Y N 307 TRP NE1 N Y N 308 TRP CE2 C Y N 309 TRP CE3 C Y N 310 TRP CZ2 C Y N 311 TRP CZ3 C Y N 312 TRP CH2 C Y N 313 TRP OXT O N N 314 TRP H H N N 315 TRP H2 H N N 316 TRP HA H N N 317 TRP HB2 H N N 318 TRP HB3 H N N 319 TRP HD1 H N N 320 TRP HE1 H N N 321 TRP HE3 H N N 322 TRP HZ2 H N N 323 TRP HZ3 H N N 324 TRP HH2 H N N 325 TRP HXT H N N 326 TYR N N N N 327 TYR CA C N S 328 TYR C C N N 329 TYR O O N N 330 TYR CB C N N 331 TYR CG C Y N 332 TYR CD1 C Y N 333 TYR CD2 C Y N 334 TYR CE1 C Y N 335 TYR CE2 C Y N 336 TYR CZ C Y N 337 TYR OH O N N 338 TYR OXT O N N 339 TYR H H N N 340 TYR H2 H N N 341 TYR HA H N N 342 TYR HB2 H N N 343 TYR HB3 H N N 344 TYR HD1 H N N 345 TYR HD2 H N N 346 TYR HE1 H N N 347 TYR HE2 H N N 348 TYR HH H N N 349 TYR HXT H N N 350 VAL N N N N 351 VAL CA C N S 352 VAL C C N N 353 VAL O O N N 354 VAL CB C N N 355 VAL CG1 C N N 356 VAL CG2 C N N 357 VAL OXT O N N 358 VAL H H N N 359 VAL H2 H N N 360 VAL HA H N N 361 VAL HB H N N 362 VAL HG11 H N N 363 VAL HG12 H N N 364 VAL HG13 H N N 365 VAL HG21 H N N 366 VAL HG22 H N N 367 VAL HG23 H N N 368 VAL HXT H N N 369 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 PRO N CA sing N N 239 PRO N CD sing N N 240 PRO N H sing N N 241 PRO CA C sing N N 242 PRO CA CB sing N N 243 PRO CA HA sing N N 244 PRO C O doub N N 245 PRO C OXT sing N N 246 PRO CB CG sing N N 247 PRO CB HB2 sing N N 248 PRO CB HB3 sing N N 249 PRO CG CD sing N N 250 PRO CG HG2 sing N N 251 PRO CG HG3 sing N N 252 PRO CD HD2 sing N N 253 PRO CD HD3 sing N N 254 PRO OXT HXT sing N N 255 SER N CA sing N N 256 SER N H sing N N 257 SER N H2 sing N N 258 SER CA C sing N N 259 SER CA CB sing N N 260 SER CA HA sing N N 261 SER C O doub N N 262 SER C OXT sing N N 263 SER CB OG sing N N 264 SER CB HB2 sing N N 265 SER CB HB3 sing N N 266 SER OG HG sing N N 267 SER OXT HXT sing N N 268 THR N CA sing N N 269 THR N H sing N N 270 THR N H2 sing N N 271 THR CA C sing N N 272 THR CA CB sing N N 273 THR CA HA sing N N 274 THR C O doub N N 275 THR C OXT sing N N 276 THR CB OG1 sing N N 277 THR CB CG2 sing N N 278 THR CB HB sing N N 279 THR OG1 HG1 sing N N 280 THR CG2 HG21 sing N N 281 THR CG2 HG22 sing N N 282 THR CG2 HG23 sing N N 283 THR OXT HXT sing N N 284 TRP N CA sing N N 285 TRP N H sing N N 286 TRP N H2 sing N N 287 TRP CA C sing N N 288 TRP CA CB sing N N 289 TRP CA HA sing N N 290 TRP C O doub N N 291 TRP C OXT sing N N 292 TRP CB CG sing N N 293 TRP CB HB2 sing N N 294 TRP CB HB3 sing N N 295 TRP CG CD1 doub Y N 296 TRP CG CD2 sing Y N 297 TRP CD1 NE1 sing Y N 298 TRP CD1 HD1 sing N N 299 TRP CD2 CE2 doub Y N 300 TRP CD2 CE3 sing Y N 301 TRP NE1 CE2 sing Y N 302 TRP NE1 HE1 sing N N 303 TRP CE2 CZ2 sing Y N 304 TRP CE3 CZ3 doub Y N 305 TRP CE3 HE3 sing N N 306 TRP CZ2 CH2 doub Y N 307 TRP CZ2 HZ2 sing N N 308 TRP CZ3 CH2 sing Y N 309 TRP CZ3 HZ3 sing N N 310 TRP CH2 HH2 sing N N 311 TRP OXT HXT sing N N 312 TYR N CA sing N N 313 TYR N H sing N N 314 TYR N H2 sing N N 315 TYR CA C sing N N 316 TYR CA CB sing N N 317 TYR CA HA sing N N 318 TYR C O doub N N 319 TYR C OXT sing N N 320 TYR CB CG sing N N 321 TYR CB HB2 sing N N 322 TYR CB HB3 sing N N 323 TYR CG CD1 doub Y N 324 TYR CG CD2 sing Y N 325 TYR CD1 CE1 sing Y N 326 TYR CD1 HD1 sing N N 327 TYR CD2 CE2 doub Y N 328 TYR CD2 HD2 sing N N 329 TYR CE1 CZ doub Y N 330 TYR CE1 HE1 sing N N 331 TYR CE2 CZ sing Y N 332 TYR CE2 HE2 sing N N 333 TYR CZ OH sing N N 334 TYR OH HH sing N N 335 TYR OXT HXT sing N N 336 VAL N CA sing N N 337 VAL N H sing N N 338 VAL N H2 sing N N 339 VAL CA C sing N N 340 VAL CA CB sing N N 341 VAL CA HA sing N N 342 VAL C O doub N N 343 VAL C OXT sing N N 344 VAL CB CG1 sing N N 345 VAL CB CG2 sing N N 346 VAL CB HB sing N N 347 VAL CG1 HG11 sing N N 348 VAL CG1 HG12 sing N N 349 VAL CG1 HG13 sing N N 350 VAL CG2 HG21 sing N N 351 VAL CG2 HG22 sing N N 352 VAL CG2 HG23 sing N N 353 VAL OXT HXT sing N N 354 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'the same nanobody from an unpublished complex' # _space_group.name_H-M_alt 'P 43 21 2' _space_group.name_Hall 'P 4nw 2abw' _space_group.IT_number 96 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 8QF3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.017492 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017492 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006866 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_